HHsearch results for GI: 255764498 and protein with PDBid: 2oxo_A
>2oxo_A Integrase; DNA-binding protein, four-helix bundle, DNA binding protein; 2.00A {Unidentified phage}
Probab=99.31 E-value=4.6e-12 Score=88.16 Aligned_cols=86 Identities=19% Similarity=0.192 Sum_probs=77.7
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 64138999999999999999997544998688999999999999997799843532210112334321000122222212
Q gi|255764498|r 5 ERASSINTLSAYKRDLKEMQNFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQRRKISVIRQFYNFLCYEGLRKDNPS 84 (300)
Q Consensus 5 ~R~~S~~T~~~Y~~~l~~f~~~~~~~~~~~~~i~~~~i~~~~~~l~~~~~s~~T~~~~~~~l~~~~~~~~~~~~~~~np~ 84 (300)
++++|++|+..|...++.+..+++ +.++.+++..+++.|+..+.+++ +++|+++.++.|+++|+||+..|+++.||+
T Consensus 16 ~~~~~~~T~~~y~~~l~~~~~~~g--~~~l~~it~~~i~~~~~~~~~~~-~~~t~~~~~~~l~~~f~~Av~~g~i~~NP~ 92 (103)
T 2oxo_A 16 SRGIKQKTLINYMSKIKAIRRGLP--DAPLEDITTKEIAAMLNGYIDEG-KAASAKLIRSTLSDAFREAIAEGHITTNHV 92 (103)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHSC--SCBGGGCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHHHTTSCSSCTT
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
T ss_conf 879999999999999999999986--89677764698999999999847-715899999999999999998889576954
Q ss_pred CCCCCCCCC
Q ss_conf 222121222
Q gi|255764498|r 85 DTLELPKKN 93 (300)
Q Consensus 85 ~~i~~~k~~ 93 (300)
.+++.|+..
T Consensus 93 ~~vk~pk~k 101 (103)
T 2oxo_A 93 AATRAAKSE 101 (103)
T ss_dssp C--------
T ss_pred HHCCCCCCC
T ss_conf 316667878