Probab=99.97 E-value=1.1e-31 Score=200.97 Aligned_cols=166 Identities=28% Similarity=0.408 Sum_probs=125.4 Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHH Q ss_conf 12233202469999864320012561027765431100012210013433343200000111100011122211111000 Q gi|255764498|r 96 LPKTLHKDTIANLLEQAKIEAENPAPGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMIIQGKGNKERLVIL 175 (300) Q Consensus 96 ~~~~ls~~e~~~ll~~~~~~~~~~~~~~~~~~R~~~il~ll~~tGlR~~Ei~~L~~~di~~~~~~i~v~~K~~k~R~ipi 175 (300) ...+|+++|+.+|++++.... . ...++++.++++||||++|+++|+|+||+++. ...+.+|++++|.||| T Consensus 3 ~~~~Lt~eEi~~l~~~~~~~~-~--------~~~~~~i~l~~~tG~R~~E~~~L~~~dI~~~~-~~~~~~K~~~~r~ipl 72 (170) T d1aiha_ 3 ELAFLYERDIYRLLAECDNSR-N--------PDLGLIVRICLATGARWSEAETLTQSQVMPYK-ITFTNTKSKKNRTVPI 72 (170) T ss_dssp CCCCCCHHHHHHHHHHHTTSS-S--------TTHHHHHHHHHHHCCCHHHHHTCBTTTEETTE-EEEESSSSSCEEEEEC T ss_pred CCCCCCHHHHHHHHHHHHHCC-C--------HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC-EEECCCCCCCHHHHHH T ss_conf 466899999999999863658-9--------66999999999977761124443310244211-0211444430057766 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCH Q ss_conf 01247887532321001246777520012333222221111111012344201466764259885889999999858888 Q gi|255764498|r 176 SPSALHALQMYKKTCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNISPHIIRHAFASHLLEGGADL 255 (300) Q Consensus 176 ~~~~~~~l~~y~~~~~~~~~~~~~~~lf~~~~~~~~~s~~~~~~~~~~~~~~~gi~~~~~t~H~lRht~at~l~~~G~~~ 255 (300) ++.+.++|..+ ..++|+... ..+...+ .....++. ++++||+|||||||.|+++|+|+ T Consensus 73 ~~~~~~~l~~~------------~~~~~~~~~-------~~~~~~~--~~~~~~~~-~~~~~H~lRht~at~l~~~g~~~ 130 (170) T d1aiha_ 73 SDELFDMLPKK------------RGRLFNDAY-------ESFENAV--LRAEIELP-KGQLTHVLRHTFASHFMMNGGNI 130 (170) T ss_dssp CHHHHHHSCCC------------SSBSSCCCH-------HHHHHHH--HHTTCCCC-TTCTTTHHHHHHHHHHHHTTCCH T ss_pred HHHHHHHHHHH------------HCCCCCCCH-------HHHHHHH--HHHHHCCC-CCCEEEECHHHHHHHHHCCCCCH T ss_conf 99999998751------------001101111-------2443345--66650257-76101110465514552169899 Q ss_pred HHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHC Q ss_conf 899998558998998999645999999999982801110 Q gi|255764498|r 256 RTIQILLGHTDISTTQIYTHLLPDKLQKLVQDYHPLAKK 294 (300) Q Consensus 256 ~~v~~~lGH~s~~tT~~Y~~~~~~~~~~~~~~~~p~~~~ 294 (300) ..|+++|||+|++||++|+|++++.+++++ +.||++.+ T Consensus 131 ~~i~~~lGH~~~~~t~~Y~~~~~~~~~~a~-~~~p~~~~ 168 (170) T d1aiha_ 131 LVLKEILGHSTIEMTMRYAHFAPSHLESAV-KFNPLSNP 168 (170) T ss_dssp HHHHHHHTCSSHHHHGGGGGGSCCCTTHHH-HHSTTTSC T ss_pred HHHHHHHCCCCHHHHHHHHCCCHHHHHHHH-HHCCCCCC T ss_conf 999998089998999988767999999999-86857687
class: Alpha and beta proteins (a+b)
fold: DNA breaking-rejoining enzymes
superfamily: DNA breaking-rejoining enzymes
family: Lambda integrase-like, catalytic core
domain: Integrase
species: Bacteriophage HP1 [TaxId: 10690]