BLAST/PSIBLAST alignment of GI: 255764498 and GI: 116254087 at iteration 1
>gi|116254087|ref|YP_769925.1| site-specific tyrosine recombinase XerD [Rhizobium leguminosarum bv. viciae 3841] Length = 317
>gi|115258735|emb|CAK09841.1| putative tyrosine recombinase [Rhizobium leguminosarum bv. viciae 3841] Length = 317
Score = 325 bits (833), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 164/302 (54%), Positives = 224/302 (74%), Gaps = 4/302 (1%)
Query: 1 MMSSERASSINTLSAYKRDLKEMQNFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQR 60
MMS+ER ++ NTL +Y+RDL ++++FL + I L+ A++ L +YL+ L+++ SSQ
Sbjct: 15 MMSAERGAAANTLQSYERDLDDVRSFLTERSIRLTEAASTDLAAYLSSLARKGFKPSSQA 74
Query: 61 RKISVIRQFYNFLCYEGLRKDNPSDTLELPKKNHILPKTLHKDTIANLLEQAKIEAENPA 120
R+++ +RQFY FL EGLR D+P+ L+ PKK LPKT+ + + LL +A+ EAE+PA
Sbjct: 75 RRLAAMRQFYKFLYAEGLRADDPTGILDAPKKGRPLPKTMGVEEVGRLLSRAEAEAEDPA 134
Query: 121 PGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMIIQGKGNKERLVILSPSAL 180
PGQ +R+R+ L+ELLYATGMRVSELV+L A L+ R ++I+GKGNKERLV LS SA+
Sbjct: 135 PGQLQRLRMLALLELLYATGMRVSELVSLPARVLDQEGRFLMIRGKGNKERLVPLSQSAI 194
Query: 181 HALQMYKKTC----SSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNIS 236
AL+ Y + +++K WLFPS++K G+L RQVFARDLK LA RAG+ IS
Sbjct: 195 SALKSYGRLLAVENAAVKEPQESPWLFPSASKEGYLPRQVFARDLKNLAIRAGLTPSLIS 254
Query: 237 PHIIRHAFASHLLEGGADLRTIQILLGHTDISTTQIYTHLLPDKLQKLVQDYHPLAKKEK 296
PH++RHAFASHLL GADLR +Q LLGH+DISTTQIYTH+L ++LQ+LVQ +HPLAK+ K
Sbjct: 255 PHVMRHAFASHLLANGADLRVVQELLGHSDISTTQIYTHVLEERLQQLVQTHHPLAKQAK 314
Query: 297 KH 298
KH
Sbjct: 315 KH 316