BLAST/PSIBLAST alignment of GI: 255764498 and GI: 15966434 at iteration 1
>gi|15966434|ref|NP_386787.1| site-specific tyrosine recombinase XerD [Sinorhizobium meliloti 1021] Length = 311
>gi|307318393|ref|ZP_07597828.1| tyrosine recombinase XerD [Sinorhizobium meliloti AK83] Length = 311
>gi|34222988|sp|Q92ME3|XERD_RHIME RecName: Full=Tyrosine recombinase xerD Length = 311
>gi|15075705|emb|CAC47260.1| Probable integrase/recombinase DNA recombination protein [Sinorhizobium meliloti 1021] Length = 311
>gi|306896075|gb|EFN26826.1| tyrosine recombinase XerD [Sinorhizobium meliloti AK83] Length = 311
 Score =  326 bits (835), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 161/298 (54%), Positives = 218/298 (73%), Gaps = 2/298 (0%)

Query: 1   MMSSERASSINTLSAYKRDLKEMQNFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQR 60
           MMS+ER ++ NTL +Y+RDL++ ++FL ++   L+ AS + L SYL+HL+ +    SSQ 
Sbjct: 15  MMSAERGAAANTLQSYERDLEDARSFLRSRGTGLTDASADDLRSYLSHLAGQGFKASSQA 74

Query: 61  RKISVIRQFYNFLCYEGLRKDNPSDTLELPKKNHILPKTLHKDTIANLLEQAKIEAENPA 120
           R++S +RQFY FL  EGLR D+P+  L+ PKK   LPKTL  + +  L+ QA+ EA++ +
Sbjct: 75  RRLSALRQFYKFLYAEGLRTDDPTGILDAPKKARTLPKTLSIEDVTRLIGQAEAEAKSGS 134

Query: 121 PGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMIIQGKGNKERLVILSPSAL 180
                ++R+  LIELLYATGMRVSELV+L A  L    R +II+GKGNKERLV LS +A+
Sbjct: 135 DDVMAKLRMHALIELLYATGMRVSELVSLPASVLAQNGRFLIIRGKGNKERLVPLSQAAI 194

Query: 181 HALQMYKKTCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNISPHII 240
            A++ Y +     + + +  WLFPS+ K+GHL RQVFARDLK+LAARAGI+   ISPH++
Sbjct: 195 RAMRAYGEAL--QEESADSPWLFPSNGKSGHLPRQVFARDLKSLAARAGIRVAAISPHVL 252

Query: 241 RHAFASHLLEGGADLRTIQILLGHTDISTTQIYTHLLPDKLQKLVQDYHPLAKKEKKH 298
           RHAFASHLL  GADLR +Q LLGH+DISTTQIYTH+L ++L  LVQ++HPLAK+ KK 
Sbjct: 253 RHAFASHLLANGADLRAVQELLGHSDISTTQIYTHVLEERLHDLVQNHHPLAKQAKKQ 310