BLAST/PSIBLAST alignment of GI: 255764498 and GI: 162329627 at iteration 1
>gi|162329627|ref|YP_471302.2| site-specific tyrosine recombinase XerD [Rhizobium etli CFN 42] Length = 317
 Score =  335 bits (858), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 164/302 (54%), Positives = 222/302 (73%), Gaps = 4/302 (1%)

Query: 1   MMSSERASSINTLSAYKRDLKEMQNFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQR 60
           MMS+ER ++ NTL +Y+RDL ++++FLN + I L+ A++  L +YL  L+++    SSQ 
Sbjct: 15  MMSAERGAAANTLQSYERDLDDVRSFLNGRSIRLTEAASADLAAYLASLARQGFKPSSQA 74

Query: 61  RKISVIRQFYNFLCYEGLRKDNPSDTLELPKKNHILPKTLHKDTIANLLEQAKIEAENPA 120
           R+++ +RQFY FL  EGLR D+P+  L+ PKK   LPKT+  + +  LL QA+ EA++PA
Sbjct: 75  RRLAAMRQFYKFLYAEGLRTDDPTGVLDAPKKGRPLPKTMGVEEVGRLLSQAQTEADDPA 134

Query: 121 PGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMIIQGKGNKERLVILSPSAL 180
           PGQ +R R+  L+ELLYATGMRVSELV+L A  L+   R ++I+GKGNKERLV LS SA+
Sbjct: 135 PGQLQRRRMLALLELLYATGMRVSELVSLPARVLDQEGRFLMIRGKGNKERLVPLSHSAI 194

Query: 181 HALQMYKK----TCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNIS 236
            AL+ Y +      ++ K      WLFP+++K G+L RQVFARDLK LA RAG+    IS
Sbjct: 195 AALKSYGRLLAADAAAAKEPQESPWLFPAASKEGYLPRQVFARDLKNLAIRAGLTPSLIS 254

Query: 237 PHIIRHAFASHLLEGGADLRTIQILLGHTDISTTQIYTHLLPDKLQKLVQDYHPLAKKEK 296
           PH++RHAFASHLL  GADLR +Q LLGH+DISTTQIYTH+L ++LQ+LVQ +HPLAK+ K
Sbjct: 255 PHVMRHAFASHLLANGADLRVVQELLGHSDISTTQIYTHVLEERLQQLVQMHHPLAKQAK 314

Query: 297 KH 298
           KH
Sbjct: 315 KH 316