BLAST/PSIBLAST alignment of GI: 255764498 and GI: 162329627 at iteration 1
>gi|162329627|ref|YP_471302.2| site-specific tyrosine recombinase XerD [Rhizobium etli CFN 42] Length = 317
Score = 335 bits (858), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 164/302 (54%), Positives = 222/302 (73%), Gaps = 4/302 (1%)
Query: 1 MMSSERASSINTLSAYKRDLKEMQNFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQR 60
MMS+ER ++ NTL +Y+RDL ++++FLN + I L+ A++ L +YL L+++ SSQ
Sbjct: 15 MMSAERGAAANTLQSYERDLDDVRSFLNGRSIRLTEAASADLAAYLASLARQGFKPSSQA 74
Query: 61 RKISVIRQFYNFLCYEGLRKDNPSDTLELPKKNHILPKTLHKDTIANLLEQAKIEAENPA 120
R+++ +RQFY FL EGLR D+P+ L+ PKK LPKT+ + + LL QA+ EA++PA
Sbjct: 75 RRLAAMRQFYKFLYAEGLRTDDPTGVLDAPKKGRPLPKTMGVEEVGRLLSQAQTEADDPA 134
Query: 121 PGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMIIQGKGNKERLVILSPSAL 180
PGQ +R R+ L+ELLYATGMRVSELV+L A L+ R ++I+GKGNKERLV LS SA+
Sbjct: 135 PGQLQRRRMLALLELLYATGMRVSELVSLPARVLDQEGRFLMIRGKGNKERLVPLSHSAI 194
Query: 181 HALQMYKK----TCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNIS 236
AL+ Y + ++ K WLFP+++K G+L RQVFARDLK LA RAG+ IS
Sbjct: 195 AALKSYGRLLAADAAAAKEPQESPWLFPAASKEGYLPRQVFARDLKNLAIRAGLTPSLIS 254
Query: 237 PHIIRHAFASHLLEGGADLRTIQILLGHTDISTTQIYTHLLPDKLQKLVQDYHPLAKKEK 296
PH++RHAFASHLL GADLR +Q LLGH+DISTTQIYTH+L ++LQ+LVQ +HPLAK+ K
Sbjct: 255 PHVMRHAFASHLLANGADLRVVQELLGHSDISTTQIYTHVLEERLQQLVQMHHPLAKQAK 314
Query: 297 KH 298
KH
Sbjct: 315 KH 316