BLAST/PSIBLAST alignment of GI: 255764498 and GI: 209551174 at iteration 1
>gi|209551174|ref|YP_002283091.1| site-specific tyrosine recombinase XerD [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 317
>gi|209536930|gb|ACI56865.1| tyrosine recombinase XerD [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 317
 Score =  319 bits (817), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 160/302 (52%), Positives = 219/302 (72%), Gaps = 4/302 (1%)

Query: 1   MMSSERASSINTLSAYKRDLKEMQNFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQR 60
           MMS+ER +++NTL +Y+RDL ++  FL  + + L+ A++  L +YL  L+++    SSQ 
Sbjct: 15  MMSAERGAAVNTLQSYERDLDDVHAFLTGRSVRLTEAASADLAAYLASLARKGFKASSQA 74

Query: 61  RKISVIRQFYNFLCYEGLRKDNPSDTLELPKKNHILPKTLHKDTIANLLEQAKIEAENPA 120
           R+++ +RQFY FL  EGLR D+P+  L+ PKK   LPKT+  + +  LL QA+ EA + A
Sbjct: 75  RRLAAMRQFYKFLYAEGLRTDDPTGILDAPKKGRPLPKTMGVEEVGKLLSQAEAEAGDAA 134

Query: 121 PGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMIIQGKGNKERLVILSPSAL 180
           PGQ +R+R+  L+ELLYATGMRVSELV+L A  L+   R ++I+GKGNKERLV LS SA+
Sbjct: 135 PGQLQRLRMLALLELLYATGMRVSELVSLPARVLDQEGRFLMIRGKGNKERLVPLSQSAI 194

Query: 181 HALQMYKKTCSSMKMTGND----LWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNIS 236
            AL+ Y +  ++      +     WLFP+++K G+L RQVFARDLK LA RAG+    IS
Sbjct: 195 SALKSYGRLLAAENAAAKNPQESPWLFPAASKEGYLPRQVFARDLKNLAIRAGLTPSMIS 254

Query: 237 PHIIRHAFASHLLEGGADLRTIQILLGHTDISTTQIYTHLLPDKLQKLVQDYHPLAKKEK 296
           PH++RHAFASHLL  GADLR +Q LLGH+DISTTQIYTH+L ++LQ+LVQ +HPLAK+ K
Sbjct: 255 PHVMRHAFASHLLANGADLRVVQELLGHSDISTTQIYTHVLEERLQQLVQTHHPLAKQAK 314

Query: 297 KH 298
           KH
Sbjct: 315 KH 316