BLAST/PSIBLAST alignment of GI: 255764498 and GI: 209551174 at iteration 1
>gi|209551174|ref|YP_002283091.1| site-specific tyrosine recombinase XerD [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 317
>gi|209536930|gb|ACI56865.1| tyrosine recombinase XerD [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 317
Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 160/302 (52%), Positives = 219/302 (72%), Gaps = 4/302 (1%)
Query: 1 MMSSERASSINTLSAYKRDLKEMQNFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQR 60
MMS+ER +++NTL +Y+RDL ++ FL + + L+ A++ L +YL L+++ SSQ
Sbjct: 15 MMSAERGAAVNTLQSYERDLDDVHAFLTGRSVRLTEAASADLAAYLASLARKGFKASSQA 74
Query: 61 RKISVIRQFYNFLCYEGLRKDNPSDTLELPKKNHILPKTLHKDTIANLLEQAKIEAENPA 120
R+++ +RQFY FL EGLR D+P+ L+ PKK LPKT+ + + LL QA+ EA + A
Sbjct: 75 RRLAAMRQFYKFLYAEGLRTDDPTGILDAPKKGRPLPKTMGVEEVGKLLSQAEAEAGDAA 134
Query: 121 PGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMIIQGKGNKERLVILSPSAL 180
PGQ +R+R+ L+ELLYATGMRVSELV+L A L+ R ++I+GKGNKERLV LS SA+
Sbjct: 135 PGQLQRLRMLALLELLYATGMRVSELVSLPARVLDQEGRFLMIRGKGNKERLVPLSQSAI 194
Query: 181 HALQMYKKTCSSMKMTGND----LWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNIS 236
AL+ Y + ++ + WLFP+++K G+L RQVFARDLK LA RAG+ IS
Sbjct: 195 SALKSYGRLLAAENAAAKNPQESPWLFPAASKEGYLPRQVFARDLKNLAIRAGLTPSMIS 254
Query: 237 PHIIRHAFASHLLEGGADLRTIQILLGHTDISTTQIYTHLLPDKLQKLVQDYHPLAKKEK 296
PH++RHAFASHLL GADLR +Q LLGH+DISTTQIYTH+L ++LQ+LVQ +HPLAK+ K
Sbjct: 255 PHVMRHAFASHLLANGADLRVVQELLGHSDISTTQIYTHVLEERLQQLVQTHHPLAKQAK 314
Query: 297 KH 298
KH
Sbjct: 315 KH 316