BLAST/PSIBLAST alignment of GI: 255764498 and GI: 241206577 at iteration 1
>gi|241206577|ref|YP_002977673.1| site-specific tyrosine recombinase XerD [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 317
>gi|240860467|gb|ACS58134.1| tyrosine recombinase XerD [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 317
Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 164/302 (54%), Positives = 222/302 (73%), Gaps = 4/302 (1%)
Query: 1 MMSSERASSINTLSAYKRDLKEMQNFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQR 60
MMS+ER ++ NTL +Y+RDL ++++FL + I L+ A++ L +YL+ L++ SSQ
Sbjct: 15 MMSAERGAAANTLQSYERDLDDVRSFLTERSIRLTEAASADLAAYLSSLAREGFKPSSQA 74
Query: 61 RKISVIRQFYNFLCYEGLRKDNPSDTLELPKKNHILPKTLHKDTIANLLEQAKIEAENPA 120
R+++ +RQFY FL EGLR D+P+ L+ PKK LPKT+ + + LL QA+ EAE+ A
Sbjct: 75 RRLAAMRQFYKFLYAEGLRTDDPTGILDAPKKGRPLPKTMGVEEVGRLLSQAEAEAEDTA 134
Query: 121 PGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMIIQGKGNKERLVILSPSAL 180
PGQ +R+R+ L+ELLYATGMRVSELV+L A L+ R ++I+GKGNKERLV LS SA+
Sbjct: 135 PGQLQRLRMLALLELLYATGMRVSELVSLPARVLDQEGRFLMIRGKGNKERLVPLSHSAI 194
Query: 181 HALQMYKKTC----SSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNIS 236
AL+ Y + +++K WLFPS++K G+L RQVFARDLK LA RAG+ IS
Sbjct: 195 SALKSYGRLLAAENAAVKERQESPWLFPSASKEGYLPRQVFARDLKNLAIRAGLTPSLIS 254
Query: 237 PHIIRHAFASHLLEGGADLRTIQILLGHTDISTTQIYTHLLPDKLQKLVQDYHPLAKKEK 296
PH++RHAFASHLL GADLR +Q LLGH+DISTTQIYTH+L ++LQ+LVQ +HPLAK+ K
Sbjct: 255 PHVMRHAFASHLLANGADLRVVQELLGHSDISTTQIYTHVLEERLQQLVQTHHPLAKQAK 314
Query: 297 KH 298
KH
Sbjct: 315 KH 316