BLAST/PSIBLAST alignment of GI: 255764498 and GI: 241206577 at iteration 1
>gi|241206577|ref|YP_002977673.1| site-specific tyrosine recombinase XerD [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 317
>gi|240860467|gb|ACS58134.1| tyrosine recombinase XerD [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 317
 Score =  320 bits (821), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 164/302 (54%), Positives = 222/302 (73%), Gaps = 4/302 (1%)

Query: 1   MMSSERASSINTLSAYKRDLKEMQNFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQR 60
           MMS+ER ++ NTL +Y+RDL ++++FL  + I L+ A++  L +YL+ L++     SSQ 
Sbjct: 15  MMSAERGAAANTLQSYERDLDDVRSFLTERSIRLTEAASADLAAYLSSLAREGFKPSSQA 74

Query: 61  RKISVIRQFYNFLCYEGLRKDNPSDTLELPKKNHILPKTLHKDTIANLLEQAKIEAENPA 120
           R+++ +RQFY FL  EGLR D+P+  L+ PKK   LPKT+  + +  LL QA+ EAE+ A
Sbjct: 75  RRLAAMRQFYKFLYAEGLRTDDPTGILDAPKKGRPLPKTMGVEEVGRLLSQAEAEAEDTA 134

Query: 121 PGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMIIQGKGNKERLVILSPSAL 180
           PGQ +R+R+  L+ELLYATGMRVSELV+L A  L+   R ++I+GKGNKERLV LS SA+
Sbjct: 135 PGQLQRLRMLALLELLYATGMRVSELVSLPARVLDQEGRFLMIRGKGNKERLVPLSHSAI 194

Query: 181 HALQMYKKTC----SSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNIS 236
            AL+ Y +      +++K      WLFPS++K G+L RQVFARDLK LA RAG+    IS
Sbjct: 195 SALKSYGRLLAAENAAVKERQESPWLFPSASKEGYLPRQVFARDLKNLAIRAGLTPSLIS 254

Query: 237 PHIIRHAFASHLLEGGADLRTIQILLGHTDISTTQIYTHLLPDKLQKLVQDYHPLAKKEK 296
           PH++RHAFASHLL  GADLR +Q LLGH+DISTTQIYTH+L ++LQ+LVQ +HPLAK+ K
Sbjct: 255 PHVMRHAFASHLLANGADLRVVQELLGHSDISTTQIYTHVLEERLQQLVQTHHPLAKQAK 314

Query: 297 KH 298
           KH
Sbjct: 315 KH 316