RPSBLAST alignment for GI: 255764498 and conserved domain: pfam00589
>gnl|CDD|144254 pfam00589, Phage_integrase, Phage integrase family. Members of this family cleave DNA substrates by a series of staggered cuts, during which the protein becomes covalently linked to the DNA through a catalytic tyrosine residue at the carboxy end of the alignment. The catalytic site residues in CRE recombinase are Arg-173, His-289, Arg-292 and Tyr-324. Length = 170
Score = 131 bits (331), Expect = 3e-31
Identities = 62/154 (40%), Positives = 87/154 (56%), Gaps = 6/154 (3%)
Query: 127 VRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMII-QGKGNKERLVILSPSALHALQM 185
+R L+ELL TG+R+SEL++L ++L T+ I Q K K R V LS +AL AL+
Sbjct: 21 IRDRALVELLLLTGLRISELLSLRWSDIDLDNGTIRIPQTKTRKSRTVPLSDAALEALKE 80
Query: 186 YKKTCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNISPHIIRHAFA 245
+ + + +LF S + LSR R + RAGI+K ++PH +RH FA
Sbjct: 81 WLGDRKEAEESE---FLFVS-RRGKPLSRSTVNRAFRRAGKRAGIEKD-LTPHDLRHTFA 135
Query: 246 SHLLEGGADLRTIQILLGHTDISTTQIYTHLLPD 279
+HL E G LR IQ LLGH+ IS T YTH+ +
Sbjct: 136 THLAENGVPLRVIQKLLGHSSISMTMRYTHVAAE 169