>gnl|CDD|29498 cd00797, HP1_INT_C, Phage HP1 integrase, C-terminal catalytic domain. Bacteriophage HP1 and related integrases are found in eubacteria, plasmids and temperate bacteriophages of the P2 family. They belong to the DNA breaking-rejoining enzyme superfamily, which includes tyrosine recombinases and type IB topoisomerases. These enzymes share the same fold in their C-terminal catalytic domain containing six conserved active site residues and the overall reaction mechanism. The HP1 recombinase controls phage replication by site-specific recombination between the HP1 genome and the chromosomal DNA. It is a heterobifunctional DNA-binding protein, which recognizes two different DNA sequence motifs (type I and type II binding sites). The C-terminal catalytic domain of the HP1 integrase binds to the type I site, while the less conserved N-terminal domain is largely responsible for binding to the type II site.. Length = 158

 Score = 75.3 bits (185), Expect = 2e-14
 Identities = 44/155 (28%), Positives = 59/155 (38%), Gaps = 20/155 (12%)

Query: 131 LLIELLYATGMRVSELVTLSAHTLNLTERTMIIQGKGNKERLVILSPSALHALQMYKKTC 190
            +  L   TG R  E + L A  +    R    + K  K R V +S      L+  +   
Sbjct: 20  DVAILCLDTGARWGEALGLKAEDI-QEGRVTFWKTKSGKSRTVPISERVAAMLKRRRMR- 77

Query: 191 SSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNISPHIIRHAFASHLLE 250
                      LFP       L  + F    K          K  + HI+RH FASH + 
Sbjct: 78  ---------GGLFPD------LYYESFRHIWKRAKIEL---PKGQATHILRHTFASHFMM 119

Query: 251 GGADLRTIQILLGHTDISTTQIYTHLLPDKLQKLV 285
            G ++ T+Q +LGH  I  T  Y HL PD L   V
Sbjct: 120 NGGNIATLQHILGHATIEMTMRYAHLAPDHLDDAV 154