RPSBLAST alignment for GI: 255764498 and conserved domain: cd01185

>gnl|CDD|29506 cd01185, INT_Tn4399, Tn4399 and related integrases, DNA breaking-rejoining enzymes, integrase/recombinases, N- and C-terminal domains. This CD includes various bacterial integrases, including cLV25, a Bacteroides fragilis chromosomal transfer factor integrase similar to the Bacteroides mobilizable transposon, Tn4399, integrase.. Length = 299

 Score = 92.3 bits (229), Expect = 2e-19
 Identities = 64/292 (21%), Positives = 118/292 (40%), Gaps = 32/292 (10%)

Query: 1   MMSSERASSINTLSAYKRDLKEMQNFL----NNKEISLSAASTNHLISYLNHLSQ-RKLV 55
                +  + +T   Y+  LK ++ F+       +I+L   +   ++ +   L + +KL 
Sbjct: 26  RERVGKDKAQSTWKRYRTHLKNLREFIECTYKEIDIALLELTREFILEFKLFLRKEKKLS 85

Query: 56  TSSQRRKISVIRQFYNFLCYEGLRKDNPSDTLELPKKNHILPKTLHKDTIANLLEQAKIE 115
            ++    +S +++       +   +DNP    +  K+     + L  D +  L E     
Sbjct: 86  RNTAVHYLSWLKKLLKIAYRDKGLRDNPFAKFKCKKEEETDREYLTPDELQKLAET---P 142

Query: 116 AENPAPGQWKRVRIFLLIELLYATGMRVSELVTLSAHTL----NLTERTMIIQGKGNKER 171
            ++P     +R  +F        TG+R S++  L+   +    +  +     + K   E 
Sbjct: 143 CKDPRLELVRRAFLFSCF-----TGLRYSDIKKLTWEEIVEDSDGEKWIRKRRQKTKVEV 197

Query: 172 LVILSPSALHALQMYKKTCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQ 231
            + L   AL  L  Y            +  +FP       L      + LK  A  AGI 
Sbjct: 198 YIPLLDEALQILGKYP--------DEKEGLVFP------LLKNSNMNKPLKEWAKLAGI- 242

Query: 232 KKNISPHIIRHAFASHLLEGGADLRTIQILLGHTDISTTQIYTHLLPDKLQK 283
           KK+I+ H  RH FA+  L  G  + T+  +LGHT+I TTQ+Y  +  +K  +
Sbjct: 243 KKHITFHCARHTFATLQLLSGGPIETVSKMLGHTNIKTTQVYARVTDEKKSE 294