RPSBLAST alignment of GI: 255764498 and protein with PDBid: 1a0p
>1a0p_A Site-specific recombinase XERD; DNA binding, DNA recombination; 2.50A {Escherichia coli} SCOP: a.60.9.1 d.163.1.1 Length = 290
Score = 149 bits (377), Expect = 5e-37
Identities = 105/286 (36%), Positives = 169/286 (59%), Gaps = 7/286 (2%)
Query: 1 MMSSERASSINTLSAYKRDLKEMQNFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQR 60
+ E+ + NTL+AY+RDL M +L+++ ++L+ A ++ L + L + +S
Sbjct: 12 ALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERLEGGYKATSSA 71
Query: 61 RKISVIRQFYNFLCYEGLRKDNPSDTLELPKKNHILPKTLHKDTIANLLEQAKIEAENPA 120
R +S +R+ + +L E R+D+PS L PK LPK L + + + + P
Sbjct: 72 RLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQV-------ERLLQAPL 124
Query: 121 PGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMIIQGKGNKERLVILSPSAL 180
Q +R ++E+LYATG+RVSELV L+ ++L + + + GKGNKERLV L A+
Sbjct: 125 IDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLGEEAV 184
Query: 181 HALQMYKKTCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNISPHII 240
+ L+ Y + + G + + S + ++RQ F +K A AGI + +SPH++
Sbjct: 185 YWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVL 244
Query: 241 RHAFASHLLEGGADLRTIQILLGHTDISTTQIYTHLLPDKLQKLVQ 286
RHAFA+HLL GADLR +Q+LLGH+D+STTQIYTH+ ++L++L Q
Sbjct: 245 RHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQ 290