RPSBLAST alignment of GI: 255764498 and protein with PDBid: 1aih
>1aih_A HP1 integrase; DNA integration, recombination; 2.50A {Bacteriophage HP1} SCOP: d.163.1.1 Length = 170
Score = 69.0 bits (167), Expect = 1e-12
Identities = 37/177 (20%), Positives = 65/177 (36%), Gaps = 24/177 (13%)
Query: 120 APGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMIIQGKGNKERLVILSPSA 179
+ + L++ + ATG R SE TL+ + + T K K R V +S
Sbjct: 18 ECDNSRNPDLGLIVRICLATGARWSEAETLTQSQVMPYKITFT-NTKSKKNRTVPISDEL 76
Query: 180 LHALQMYKKTCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNISPHI 239
L + + + + K H+
Sbjct: 77 FDMLPKKRGRLFNDAYESFENAVLR----------------------AEIELPKGQLTHV 114
Query: 240 IRHAFASHLLEGGADLRTIQILLGHTDISTTQIYTHLLPDKLQKLVQDYHPLAKKEK 296
+RH FASH + G ++ ++ +LGH+ I T Y H P L+ V+ ++PL+ +
Sbjct: 115 LRHTFASHFMMNGGNILVLKEILGHSTIEMTMRYAHFAPSHLESAVK-FNPLSNPAQ 170