RPSBLAST alignment of GI: 255764498 and SCOP domain: d1a0pa2

Alignment

>d1a0pa2 d.163.1.1 (A:111-292) Recombinase XerD {Escherichia coli [TaxId: 562]} Length = 182

 Score =  120 bits (302), Expect = 9e-29
 Identities = 77/189 (40%), Positives = 117/189 (61%), Gaps = 7/189 (3%)

Query: 98  KTLHKDTIANLLEQAKIEAENPAPGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLT 157
           K L +  +  LL+   I+       Q   +R   ++E+LYATG+RVSELV L+   ++L 
Sbjct: 1   KDLSEAQVERLLQAPLID-------QPLELRDKAMLEVLYATGLRVSELVGLTMSDISLR 53

Query: 158 ERTMIIQGKGNKERLVILSPSALHALQMYKKTCSSMKMTGNDLWLFPSSTKTGHLSRQVF 217
           +  + + GKGNKERLV L   A++ L+ Y +      + G  + +   S +   ++RQ F
Sbjct: 54  QGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTF 113

Query: 218 ARDLKALAARAGIQKKNISPHIIRHAFASHLLEGGADLRTIQILLGHTDISTTQIYTHLL 277
              +K  A  AGI  + +SPH++RHAFA+HLL  GADLR +Q+LLGH+D+STTQIYTH+ 
Sbjct: 114 WHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVA 173

Query: 278 PDKLQKLVQ 286
            ++L++L Q
Sbjct: 174 TERLRQLHQ 182

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNA breaking-rejoining enzymes
superfamily: DNA breaking-rejoining enzymes
family: Lambda integrase-like, catalytic core
domain: Recombinase XerD
species: Escherichia coli [TaxId: 562]