RPSBLAST alignment of GI: 255764498 and SCOP domain: d1aiha_

Alignment

>d1aiha_ d.163.1.1 (A:) Integrase {Bacteriophage HP1 [TaxId: 10690]} Length = 170

 Score = 69.4 bits (168), Expect = 3e-13
 Identities = 35/177 (19%), Positives = 63/177 (35%), Gaps = 24/177 (13%)

Query: 120 APGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMIIQGKGNKERLVILSPSA 179
                +   + L++ +  ATG R SE  T    +  +  +      K  K R V +S   
Sbjct: 18  ECDNSRNPDLGLIVRICLATGARWSEAET-LTQSQVMPYKITFTNTKSKKNRTVPISDEL 76

Query: 180 LHALQMYKKTCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNISPHI 239
              L   +    +      +  +                              K    H+
Sbjct: 77  FDMLPKKRGRLFNDAYESFENAVLR----------------------AEIELPKGQLTHV 114

Query: 240 IRHAFASHLLEGGADLRTIQILLGHTDISTTQIYTHLLPDKLQKLVQDYHPLAKKEK 296
           +RH FASH +  G ++  ++ +LGH+ I  T  Y H  P  L+  V+ ++PL+   +
Sbjct: 115 LRHTFASHFMMNGGNILVLKEILGHSTIEMTMRYAHFAPSHLESAVK-FNPLSNPAQ 170

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNA breaking-rejoining enzymes
superfamily: DNA breaking-rejoining enzymes
family: Lambda integrase-like, catalytic core
domain: Integrase
species: Bacteriophage HP1 [TaxId: 10690]