HHsearch alignment for GI: 255764499 and conserved domain: LOAD_LSAT

Probab=98.69  E-value=3.1e-06  Score=56.42  Aligned_cols=164  Identities=18%  Similarity=0.244  Sum_probs=96.4

Q ss_pred             CEEEEEEEECC------CCEEEEEECCHHHHHHHHHHHHH-C-CCEEEEEECCCCCCCCHHEEEC----CEEEECCCCHH
Q ss_conf             18997400004------67069981780120123224541-2-4212134212243310110000----10342131010
Q gi|255764499|r   60 TVQIEGVDNIP------STGCIIAIKHQSSWDTFYFLTCI-Q-DPIFILKHTVFYIPIIGFYCFK----QGMIGVKRNSK  127 (266)
Q Consensus        60 ~v~v~G~e~l~------~~~~iiv~NH~S~~D~~~l~~~~-~-~~~~i~K~el~~~P~~g~~~~~----~g~i~vdR~~~  127 (266)
T Consensus        88 ~v~~~~~e~l~~~~~~~~kgvIl~t~H~GnwE~~~~~l~~~~~~~~~i~r~~--~n~~~~~~~~~~R~~~g~~~i~~~--  163 (278)
T LOAD_LSAT        88 RVEVIGLENLKQKALAQGKGVILLVPHFGNWDLAGLWLAKYYGPMIAVYRPL--KNPLLDWLITSYRERFGGKVLPRK--  163 (278)
T ss_pred             CCEECCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECC--CCHHHHHHHHHHHHHCCCEEEECC--
T ss_conf             3235488999999997699889996175659999999998099732664227--778688999999987698376166--


Q ss_pred             HHHHHHHHHHHHHHHHCCCEEEEECCCCCC-CCCCCC-------CCHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCC
Q ss_conf             000001344334442013302340256435-852002-------100356765543594578786520254468986345
Q gi|255764499|r  128 NLDMKSIINRAKKAVMDNRQLIIYPEGTRR-SPGDMP-------IYKKGIAHIYESLSVPVIPIVVHAGLFWPRKKFMRY  199 (266)
Q Consensus       128 ~~~~~~~~~~~~~~~~~g~~i~iFPEGTr~-~~~~~~-------~fk~G~f~lA~~~~~pIvPv~i~~~~~~~~~~~~~~  199 (266)
T Consensus       164 -~~~~~----~~~~lk~g~~v~ll~Dq~~~~~~g~~v~FfG~~a~t~~g~a~lA~~~~~pilp~~~~r---~~~g-----  230 (278)
T LOAD_LSAT       164 -GGIKG----LLKALKKGEVVGILPDQDLGPSDSVFVPFFATPAATTTGPAKLARKTGALVIPVFPIR---NDDG-----  230 (278)
T ss_pred             -CCHHH----HHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEE---ECCC-----
T ss_conf             -23599----9999857987999505565666774786379843144899999999889589999999---7799-----


Q ss_pred             CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             857999964888898997899999999999999999999875078778
Q gi|255764499|r  200 PGNFKVRVLKPIPAGIPRKIFFAELQEKMEHASNNLLLETIRDNPQLY  247 (266)
Q Consensus       200 ~g~v~v~~~~pI~~~~~~~~~~~~l~~~i~~~~~~l~~e~~~~~~~~~  247 (266)
T Consensus       231 -~~~~~~~~~~~~~~~~~~--~~~----~t~~~~~~lE~~I~~~Peqw  271 (278)
T LOAD_LSAT       231 -SGYTVIPSPAMDSSGTDD--VEQ----IAQAMNKIIEKFIAKHPEQY  271 (278)
T ss_pred             -CEEEEEEECCCCCCCCCC--HHH----HHHHHHHHHHHHHHCCHHHH
T ss_conf             -669999941676889999--999----99999999999997396973