HHsearch alignment for GI: 255764499 and conserved domain: PRK08943

Probab=98.69  E-value=7.1e-06  Score=54.31  Aligned_cols=163  Identities=13%  Similarity=0.177  Sum_probs=95.2

Q ss_pred             CCEEEEEEEECC-----CCEEEEEECCHHHHHHHHHHHHH-C-CCEEEEEECCCCCCCCHHEEEC----CEEEECCCCHH
Q ss_conf             818997400004-----67069981780120123224541-2-4212134212243310110000----10342131010
Q gi|255764499|r   59 TTVQIEGVDNIP-----STGCIIAIKHQSSWDTFYFLTCI-Q-DPIFILKHTVFYIPIIGFYCFK----QGMIGVKRNSK  127 (266)
Q Consensus        59 i~v~v~G~e~l~-----~~~~iiv~NH~S~~D~~~l~~~~-~-~~~~i~K~el~~~P~~g~~~~~----~g~i~vdR~~~  127 (266)
T Consensus       113 ~~i~i~g~e~l~~a~~~gkgvIllt~H~g~~El~~~~l~~~g~~~~~iyrp--~~Np~~d~li~~~R~r~g~~~i~~~~-  189 (317)
T PRK08943        113 RRVDWIGLEHLEEARANGENVIFLVPHGWAIDIPAMLLASQGQPMAAMFKN--QRNPLFDWLWNRVRRRFGGRLHAREA-  189 (317)
T ss_pred             CEEEEECHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEC--CCCHHHHHHHHHHHHHHCCCCEECCH-
T ss_conf             848994889999999669978999554027999999999659973799877--87988999999999981983232617-


Q ss_pred             HHHHHHHHHHHHHHHHCCCEEEEECCCCCC-CCCCCCCC-------HHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCC
Q ss_conf             000001344334442013302340256435-85200210-------0356765543594578786520254468986345
Q gi|255764499|r  128 NLDMKSIINRAKKAVMDNRQLIIYPEGTRR-SPGDMPIY-------KKGIAHIYESLSVPVIPIVVHAGLFWPRKKFMRY  199 (266)
Q Consensus       128 ~~~~~~~~~~~~~~~~~g~~i~iFPEGTr~-~~~~~~~f-------k~G~f~lA~~~~~pIvPv~i~~~~~~~~~~~~~~  199 (266)
T Consensus       190 --g~r~ii----k~Lk~g~~v~~l~DQd~g~~~gvfv~FFG~~a~T~~~~~~lA~~~~a~Vvp~~~~~----~-----~~  254 (317)
T PRK08943        190 --GIKPFI----QSVRQGYWGYYLPDEDHGPEQSVFVDFFATYKATLPGIGRLAKVCRAKVVPLFPVY----N-----AK  254 (317)
T ss_pred             --HHHHHH----HHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEE----E-----CC
T ss_conf             --699999----98736972689524446887661116679845410499999998399679999999----6-----58


Q ss_pred             CCEEEEEECCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             85799996488889--8997899999999999999999999875078778
Q gi|255764499|r  200 PGNFKVRVLKPIPA--GIPRKIFFAELQEKMEHASNNLLLETIRDNPQLY  247 (266)
Q Consensus       200 ~g~v~v~~~~pI~~--~~~~~~~~~~l~~~i~~~~~~l~~e~~~~~~~~~  247 (266)
T Consensus       255 ~g~y~v~~~p~~~~~~~~d~~~~~~~--------~n~~lE~~Ir~~PeQy  296 (317)
T PRK08943        255 THRLEIEIRPPMDDLPSADDETIARA--------MNEEVEQFVGPYPEQY  296 (317)
T ss_pred             CCEEEEEEECCCCCCCCCCHHHHHHH--------HHHHHHHHHHCCCHHH
T ss_conf             97399999637778899999999999--------9999999997591664