RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|255764499|ref|YP_003064993.2| 1-acyl-sn-glycerol-3-phosphate
acyltransferase [Candidatus Liberibacter asiaticus str. psy62]
         (266 letters)



>d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase
           {Cushaw squash (Cucurbita moschata) [TaxId: 3662]}
          Length = 367

 Score = 55.0 bits (132), Expect = 6e-09
 Identities = 26/200 (13%), Positives = 58/200 (29%), Gaps = 34/200 (17%)

Query: 64  EGVDNIP-STGCIIAIKHQSSWDTFYFLTCI--------QDPIFILKHTVFYIPIIGFYC 114
           +  + +      ++   HQ+  D       +        ++ IF+    V   P+   + 
Sbjct: 121 DIEEKLQQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFS 180

Query: 115 FKQGMIGVKRNSKNLDMKSIINRAKKAVMDNRQ------------LIIYPEGTRRSPGDM 162
             + +I V       D+  +    +KA   + +            + I P G R  P   
Sbjct: 181 IGRNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPS 240

Query: 163 ----------PIYKKGIAHIYESLSVP--VIPIVVHAGLFWPR-KKFMRYPGNFKVRVLK 209
                           +  + +   VP  + P+ +      P   +     G  +V    
Sbjct: 241 TGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLCHDIMPPPSQVEIEIGEKRVIAFN 300

Query: 210 PIPAGIPRKIFFAELQEKME 229
                +  +I F E+    +
Sbjct: 301 GAGLSVAPEISFEEIAATHK 320


>d1vmia_ c.77.1.5 (A:) Ethanolamine utilization protein EutD
           {Escherichia coli [TaxId: 562]}
          Length = 329

 Score = 27.0 bits (59), Expect = 1.6
 Identities = 4/25 (16%), Positives = 14/25 (56%)

Query: 131 MKSIINRAKKAVMDNRQLIIYPEGT 155
           +++II R ++  +     +++P+  
Sbjct: 5   LRAIIERCRELALRAPARVVFPDAL 29


>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase)
           {Basidomycetos fungus (Phanerochaete chrysosporium)
           [TaxId: 5306]}
          Length = 357

 Score = 26.9 bits (59), Expect = 2.0
 Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 6/48 (12%)

Query: 115 FKQGMIGVKRNSKNLDMKSIINRAKKAVMDNRQLIIYPEGTRRSPGDM 162
            K  ++G  RNS  +D   ++   K A        ++P  T   P D+
Sbjct: 274 SKLAVLGHNRNSL-IDCSDVVPVPKPATGQP---AMFPAST--GPQDL 315


>d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId:
           10116]}
          Length = 159

 Score = 25.7 bits (56), Expect = 4.3
 Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 161 DMPIYKKGIAHIYESLSVPVIPIVVHAGLFWPRKKFMRYPGNFKVRVLKPIPAGIPR 217
            +P  +      Y   + P + I V+ G      K     G F++  + P P G+P+
Sbjct: 35  TIPTKQTQTFTTYSD-NQPGVLIQVYEGER-AMTKDNNLLGKFELTGIPPAPRGVPQ 89


>d1xcoa_ c.77.1.5 (A:) Phosphotransacetylase Pta {Bacillus subtilis
           [TaxId: 1423]}
          Length = 324

 Score = 25.1 bits (54), Expect = 6.1
 Identities = 6/25 (24%), Positives = 12/25 (48%)

Query: 131 MKSIINRAKKAVMDNRQLIIYPEGT 155
           M  + +  ++ V      I++PEG 
Sbjct: 2   MADLFSTVQEKVAGKDVKIVFPEGL 26


>d1r5ja_ c.77.1.5 (A:) Phosphotransacetylase Pta {Streptococcus
           pyogenes [TaxId: 1314]}
          Length = 329

 Score = 25.1 bits (54), Expect = 7.1
 Identities = 5/25 (20%), Positives = 14/25 (56%)

Query: 131 MKSIINRAKKAVMDNRQLIIYPEGT 155
           ++S+    ++ ++     I++PEG 
Sbjct: 3   IRSLFGGLREKILGKNMKIVFPEGN 27


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.330    0.144    0.446 

Gapped
Lambda     K      H
   0.267   0.0520    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,031,265
Number of extensions: 48467
Number of successful extensions: 136
Number of sequences better than 10.0: 1
Number of HSP's gapped: 134
Number of HSP's successfully gapped: 9
Length of query: 266
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 182
Effective length of database: 1,254,276
Effective search space: 228278232
Effective search space used: 228278232
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 52 (24.3 bits)