RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|255764499|ref|YP_003064993.2| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Candidatus Liberibacter asiaticus str. psy62] (266 letters) >d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} Length = 367 Score = 55.0 bits (132), Expect = 6e-09 Identities = 26/200 (13%), Positives = 58/200 (29%), Gaps = 34/200 (17%) Query: 64 EGVDNIP-STGCIIAIKHQSSWDTFYFLTCI--------QDPIFILKHTVFYIPIIGFYC 114 + + + ++ HQ+ D + ++ IF+ V P+ + Sbjct: 121 DIEEKLQQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFS 180 Query: 115 FKQGMIGVKRNSKNLDMKSIINRAKKAVMDNRQ------------LIIYPEGTRRSPGDM 162 + +I V D+ + +KA + + + I P G R P Sbjct: 181 IGRNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPS 240 Query: 163 ----------PIYKKGIAHIYESLSVP--VIPIVVHAGLFWPR-KKFMRYPGNFKVRVLK 209 + + + VP + P+ + P + G +V Sbjct: 241 TGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLCHDIMPPPSQVEIEIGEKRVIAFN 300 Query: 210 PIPAGIPRKIFFAELQEKME 229 + +I F E+ + Sbjct: 301 GAGLSVAPEISFEEIAATHK 320 >d1vmia_ c.77.1.5 (A:) Ethanolamine utilization protein EutD {Escherichia coli [TaxId: 562]} Length = 329 Score = 27.0 bits (59), Expect = 1.6 Identities = 4/25 (16%), Positives = 14/25 (56%) Query: 131 MKSIINRAKKAVMDNRQLIIYPEGT 155 +++II R ++ + +++P+ Sbjct: 5 LRAIIERCRELALRAPARVVFPDAL 29 >d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Score = 26.9 bits (59), Expect = 2.0 Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 6/48 (12%) Query: 115 FKQGMIGVKRNSKNLDMKSIINRAKKAVMDNRQLIIYPEGTRRSPGDM 162 K ++G RNS +D ++ K A ++P T P D+ Sbjct: 274 SKLAVLGHNRNSL-IDCSDVVPVPKPATGQP---AMFPAST--GPQDL 315 >d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 159 Score = 25.7 bits (56), Expect = 4.3 Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 2/57 (3%) Query: 161 DMPIYKKGIAHIYESLSVPVIPIVVHAGLFWPRKKFMRYPGNFKVRVLKPIPAGIPR 217 +P + Y + P + I V+ G K G F++ + P P G+P+ Sbjct: 35 TIPTKQTQTFTTYSD-NQPGVLIQVYEGER-AMTKDNNLLGKFELTGIPPAPRGVPQ 89 >d1xcoa_ c.77.1.5 (A:) Phosphotransacetylase Pta {Bacillus subtilis [TaxId: 1423]} Length = 324 Score = 25.1 bits (54), Expect = 6.1 Identities = 6/25 (24%), Positives = 12/25 (48%) Query: 131 MKSIINRAKKAVMDNRQLIIYPEGT 155 M + + ++ V I++PEG Sbjct: 2 MADLFSTVQEKVAGKDVKIVFPEGL 26 >d1r5ja_ c.77.1.5 (A:) Phosphotransacetylase Pta {Streptococcus pyogenes [TaxId: 1314]} Length = 329 Score = 25.1 bits (54), Expect = 7.1 Identities = 5/25 (20%), Positives = 14/25 (56%) Query: 131 MKSIINRAKKAVMDNRQLIIYPEGT 155 ++S+ ++ ++ I++PEG Sbjct: 3 IRSLFGGLREKILGKNMKIVFPEGN 27 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.330 0.144 0.446 Gapped Lambda K H 0.267 0.0520 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 1,031,265 Number of extensions: 48467 Number of successful extensions: 136 Number of sequences better than 10.0: 1 Number of HSP's gapped: 134 Number of HSP's successfully gapped: 9 Length of query: 266 Length of database: 2,407,596 Length adjustment: 84 Effective length of query: 182 Effective length of database: 1,254,276 Effective search space: 228278232 Effective search space used: 228278232 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 52 (24.3 bits)