HHsearch alignment for GI: 255764501 and conserved domain: COG4174
>COG4174 ABC-type uncharacterized transport system, permease component [General function prediction only].
Probab=96.35 E-value=0.0055 Score=32.56 Aligned_cols=159 Identities=13% Similarity=0.165 Sum_probs=88.3
Q ss_pred CCHHHHHHHHCCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 100134676438354799999----9999999765665211112210002211565126799999997465532376676
Q gi|255764501|r 314 MNAKLLLRLLQQSGLWSSFFN----SIYIAINAGVLCMIFTIMLLWTKRELRLRRLKFFNHIFELSELLILAVPSIVLAV 389 (535)
Q Consensus 314 ~~~~~~~~~~~~~~~~~a~~~----Sl~~s~~~~~i~~~l~l~~a~~~~~~~~~~~~~~~~~~~~~~~lp~~iP~iv~~~ 389 (535)
T Consensus 110 ~rfDfGeS~fr~~~VidLI~eklPVSiSlGlw~tli~YliSIPLGI~KA---v~~gs~fDvwsS~viiigyAiP~Flfai 186 (364)
T COG4174 110 ARFDFGESFFRDASVIDLIKEKLPVSISLGLWSTLIIYLISIPLGIRKA---VRNGSRFDVWSSAVIIIGYAIPAFLFAI 186 (364)
T ss_pred HHCCCCHHHHCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCHHHHHH---HHCCCCCEEEEEEEEEEECCCHHHHHHH
T ss_conf 7103338764577199999974782787689999999997433328888---7479842022113688732427999999
Q ss_pred HHHHCCCCCCCC-------------CCCCCCCCCEEEEE-EECH--------HHH---HHHHHHHHHCCHHHHHHHHHCC
Q ss_conf 643012346775-------------66553443102465-2121--------569---9999989728977899999739
Q gi|255764501|r 390 GFFLLLKNTVNL-------------TSSSYSLIIVTNAL-MAVP--------YAV---KILENPMYDLAERYNALCISLQ 444 (535)
Q Consensus 390 ~~~~~~~~~~~~-------------~~~~~~~iila~~~-~~lP--------~~~---~~l~~~l~~i~~~l~eaA~~lG 444 (535)
T Consensus 187 lLiVlFaGGsy~dwFPLRGLvSdnf~~L~~~~ki~DYlWH~tLPv~a~v~g~FAt~TlLtKNSFldEi~KqYVvTARAKG 266 (364)
T COG4174 187 LLIVLFAGGSYFDWFPLRGLVSDNFDQLSWYGKITDYLWHITLPVLALVLGGFATLTLLTKNSFLDEIRKQYVVTARAKG 266 (364)
T ss_pred HHHHHHCCCCCEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCC
T ss_conf 99974158761012001463458834347278889999998888999998667778887530589997645266323158
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7876999999999546899999999999985
Q gi|255764501|r 445 IKGINRLYLIEFKALKRLMAQTFSFSCLLSI 475 (535)
Q Consensus 445 a~~~~~f~~I~lPll~p~i~~~~~l~f~~s~ 475 (535)
T Consensus 267 lserrvly~HVFRNAMLlviaGfP~afis~F 297 (364)
T COG4174 267 LSERRVLYKHVFRNAMLLVIAGFPAAFISMF 297 (364)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 8554526998863427887617809999999