HHsearch alignment for GI: 255764501 and conserved domain: COG4209
>COG4209 LplB ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].
Probab=99.89 E-value=1.4e-21 Score=131.52 Aligned_cols=235 Identities=15% Similarity=0.188 Sum_probs=177.6
Q ss_pred HHHHHHHHCCCCCCCCC--------CC------CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999974123221000--------11------00134676438354799999999999976566521111221000221
Q gi|255764501|r 296 SCAIWFFILPLLAIIIE--------GM------NAKLLLRLLQQSGLWSSFFNSIYIAINAGVLCMIFTIMLLWTKRELR 361 (535)
Q Consensus 296 ~~~~l~~i~pl~~ii~~--------~~------~~~~~~~~~~~~~~~~a~~~Sl~~s~~~~~i~~~l~l~~a~~~~~~~ 361 (535)
T Consensus 31 iw~liF~YiPm~G~viAFkDy~p~~~i~~S~WVG~~~F~~lF~~~~ff~i~rNTl~~s~~~li~gf~~pI~lAillnEl- 109 (309)
T COG4209 31 IWFLIFKYIPMFGNVIAFKDYRPFLSITGSEWVGLKNFKFLFSSPDFFIILRNTLLYSVLFLILGFPVPIILAILLNEL- 109 (309)
T ss_pred HHHHHHHHHHHHHHEEEECCCCHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf 9999999874665312212564011135797513899999971873999999999999999999537999999999999-
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---------------CCCCCC-CC--CCCCCEEEEEEECHHHHH
Q ss_conf 156512679999999746553237667664301234---------------677566-55--344310246521215699
Q gi|255764501|r 362 LRRLKFFNHIFELSELLILAVPSIVLAVGFFLLLKN---------------TVNLTS-SS--YSLIIVTNALMAVPYAVK 423 (535)
Q Consensus 362 ~~~~~~~~~~~~~~~~lp~~iP~iv~~~~~~~~~~~---------------~~~~~~-~~--~~~iila~~~~~lP~~~~ 423 (535)
T Consensus 110 --r~~~~kk~~QT~~y~PhFlSWVVv~~~v~~fls~d~GiiN~ll~~~g~~pi~fl~~~~wf~~i~i~~~vWK~~G~~SI 187 (309)
T COG4209 110 --RNKVFKKVVQTISYLPHFLSWVVVSGFVFAFLSIDGGIINQLLMSLGGDPINFLTNPDWFRPIIIFSSVWKGAGWNSI 187 (309)
T ss_pred --HHHHHHHHHHHHHHHCHHEEEHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEHHCCCCCHHHHHHHHHHHHHCCHHHH
T ss_conf --877788887663330002100305657887636675189999998289831021588602678878988842367889
Q ss_pred HHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCEEEEECCCC----CCHHHHHHHH
Q ss_conf 99998972897789999973978769999999995468999999999999851-101167864898----3028989998
Q gi|255764501|r 424 ILENPMYDLAERYNALCISLQIKGINRLYLIEFKALKRLMAQTFSFSCLLSIG-DFGIIALFGNDN----FCTLPCYLYQ 498 (535)
Q Consensus 424 ~l~~~l~~i~~~l~eaA~~lGa~~~~~f~~I~lPll~p~i~~~~~l~f~~s~~-e~~~~~ll~~~~----~~Tl~~~i~~ 498 (535)
T Consensus 188 iylAai~~Idpt~YEAA~vDGA~rwqqiwhITlP~i~P~ivIllIL~iG~i~~~gFe~~yll~~~~~~~v~~vldtYVy~ 267 (309)
T COG4209 188 IYLAAIAGIDPTLYEAAMVDGASRWQQIWHITLPAIRPLIVILLILNIGNIFNAGFELFYLLPNPSGYDVTEVLDTYVYR 267 (309)
T ss_pred HHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCHHHHHHHHHHH
T ss_conf 99999972799999999805488778888211032314999999998523765372560660576687489899999998
Q ss_pred H-HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 8-6179813699999999999999999999971466
Q gi|255764501|r 499 Q-LGSYRQSDAVVTALLLLSLCLGLFSLLEYLSGKE 533 (535)
Q Consensus 499 ~-~~~~~~~~a~a~a~il~~i~~~~~~l~~~l~~r~ 533 (535)
T Consensus 268 ~gl~~Gd~s~sTAaGlf~svVg~iLl~~aN~iakr~ 303 (309)
T COG4209 268 GGLVTGDYSYSTAAGLFQSVVGFILLFLANRIAKRF 303 (309)
T ss_pred HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 101357511899999999999999999999999970