HHsearch alignment for GI: 255764501 and conserved domain: COG4239
>COG4239 ABC-type uncharacterized transport system, permease component [General function prediction only].
Probab=98.28 E-value=8.8e-05 Score=42.15 Aligned_cols=151 Identities=16% Similarity=0.166 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCC
Q ss_conf 99999999999999999999999999970799617999999999998899999999999972278542103315888764
Q gi|255764501|r 55 VIGFTFWQALLSTLLSVIPSIFLAKSLFRRHFPGRILFLRLHTMIFVLPVFVVIMGVFTVYGRTGWIAQLCQWLGIVYQF 134 (535)
Q Consensus 55 ~l~nTl~~a~~s~~~~~~ig~~~A~~~~~~~~~~~~~~~~~~~lp~~~P~~v~~~~~~~~~~~~G~~~~~l~~~g~~~~~ 134 (535)
T Consensus 143 SvLfgL~lT~~SaliGv~~GA~qGyfgg~vdL~~QRfIEvws~mP~lyllii~----as~~~p----------------- 201 (341)
T COG4239 143 SVLFGLSLTLISALIGVLAGALQGYFGGWVDLLGQRFIEVWSGMPTLYLLIIL----ASIFQP----------------- 201 (341)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHH----HHHHCC-----------------
T ss_conf 99999999999999999888775341300488770599998447299999999----999685-----------------
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHH
Q ss_conf 33326999999999876654899999985088899999986214714677544200166402457778777652584156
Q gi|255764501|r 135 NLYGIKGILLVHVFFNMPLAIRMLLQALDSISIEQRQLALQLGMNPWYFFRFVEWPYLRRQILPTSSLIFMLCFASFATV 214 (535)
Q Consensus 135 ~~~~~~~iii~~~~~~~p~~~l~~~~~l~~i~~~~~eaA~~lGas~~~~f~~v~lP~~~p~i~~~~~l~f~~~~~~f~~~ 214 (535)
T Consensus 202 ~f~~ll~i~llf~W--m~lv~vvRaefLr~Rn~dYvkAArAlGv~d~~Ii~rHilPnamvatlTflPf~l~~sitTltsL 279 (341)
T COG4239 202 NFWWLLGIMLLFGW--MSLVGVVRAEFLRARNLDYVKAARALGVSDRRIILRHILPNAMVATLTFLPFILSGSITTLTSL 279 (341)
T ss_pred CHHHHHHHHHHHHH--HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEHHHHCCHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 47999999999999--9999999999998602688999997398865030213262988999998789870633230016
Q ss_pred HHHC--CCCCCCCHHH
Q ss_conf 6403--6655441145
Q gi|255764501|r 215 LTLG--GGPASTTIEL 228 (535)
Q Consensus 215 ~~lg--g~~~~~tl~~ 228 (535)
T Consensus 280 dFLgfglp~gspSLGE 295 (341)
T COG4239 280 DFLGFGLPPGSPSLGE 295 (341)
T ss_pred HHHCCCCCCCCCCHHH
T ss_conf 6652699999967899