HHsearch alignment for GI: 255764501 and conserved domain: PRK09881
>PRK09881 ATP-dependent peptide transporter membrane subunit; Provisional.
Probab=99.52 E-value=4.1e-12 Score=81.14 Aligned_cols=190 Identities=12% Similarity=0.069 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 79999999999997656652111122100022115651267999999974655323766766430123467756655344
Q gi|255764501|r 329 WSSFFNSIYIAINAGVLCMIFTIMLLWTKRELRLRRLKFFNHIFELSELLILAVPSIVLAVGFFLLLKNTVNLTSSSYSL 408 (535)
Q Consensus 329 ~~a~~~Sl~~s~~~~~i~~~l~l~~a~~~~~~~~~~~~~~~~~~~~~~~lp~~iP~iv~~~~~~~~~~~~~~~~~~~~~~ 408 (535)
T Consensus 90 l~G~r~sL~i~l~~~~i~~~iG~~lG~~aGy~gG~----~D~il~ri~Dv~~aiP~lll~i~l~~~~g-------~~~~~ 158 (296)
T PRK09881 90 LVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGR----ADAIIMRIMDIMLSIPSLVLTMALAAALG-------PSLFN 158 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH----HHHHHHHHHHHCCCCCCHHHHHHHHHHHC-------CCHHH
T ss_conf 88799999999999999999999999988881760----76655677763015860577788876516-------75168
Q ss_pred CCEEEEEEECHHHHHHHHHHHHHC-CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC--
Q ss_conf 310246521215699999989728-97789999973978769999999995468999999999999851101167864--
Q gi|255764501|r 409 IIVTNALMAVPYAVKILENPMYDL-AERYNALCISLQIKGINRLYLIEFKALKRLMAQTFSFSCLLSIGDFGIIALFG-- 485 (535)
Q Consensus 409 iila~~~~~lP~~~~~l~~~l~~i-~~~l~eaA~~lGa~~~~~f~~I~lPll~p~i~~~~~l~f~~s~~e~~~~~ll~-- 485 (535)
T Consensus 159 ~il~i~l~~w~~~aR~vR~~~l~i~~~~yV~AAr~~G~s~~~Ii~rhiLPni~~~liv~~~~~~~~aIl~ea~LsFLGlG 238 (296)
T PRK09881 159 AMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLG 238 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 88999998799999999999999963499999998398867854142766618899999999999999999999990378
Q ss_pred -CCCCCHHHHHHHHH---HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -89830289899988---6179813699999999999999999999971
Q gi|255764501|r 486 -NDNFCTLPCYLYQQ---LGSYRQSDAVVTALLLLSLCLGLFSLLEYLS 530 (535)
Q Consensus 486 -~~~~~Tl~~~i~~~---~~~~~~~~a~a~a~il~~i~~~~~~l~~~l~ 530 (535)
T Consensus 239 ~~pp~~sWG~mi~~~~~~~~~-~~w~~~~Pg~~i~l~vl~~nllgdgLr 286 (296)
T PRK09881 239 AQQPSAEWGAMVANGRNYVLD-QWWYCAFPGAAILLTAVGFNLFGDGIR 286 (296)
T ss_pred CCCCCCCHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999998599999999999987-729999999999999999999999999