HHsearch alignment for GI: 255764501 and conserved domain: PRK09881
>PRK09881 ATP-dependent peptide transporter membrane subunit; Provisional.
Probab=99.40 E-value=1.1e-11 Score=78.85 Aligned_cols=160 Identities=14% Similarity=0.138 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
Q ss_conf 99999999999999999999999999999997079961799999999999889999999999997227854210331588
Q gi|255764501|r 51 YLWHVIGFTFWQALLSTLLSVIPSIFLAKSLFRRHFPGRILFLRLHTMIFVLPVFVVIMGVFTVYGRTGWIAQLCQWLGI 130 (535)
Q Consensus 51 ~~~~~l~nTl~~a~~s~~~~~~ig~~~A~~~~~~~~~~~~~~~~~~~lp~~~P~~v~~~~~~~~~~~~G~~~~~l~~~g~ 130 (535)
T Consensus 88 rll~G~r~sL~i~l~~~~i~~~iG~~lG~~aGy~gG~~D~il~ri~Dv~~aiP~lll~i~l~~~~g~------------- 154 (296)
T PRK09881 88 RVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGP------------- 154 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC-------------
T ss_conf 9888799999999999999999999999988881760766556777630158605777888765167-------------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
Q ss_conf 876433326999999999876654899999-9850888999999862147146775442001664024577787776525
Q gi|255764501|r 131 VYQFNLYGIKGILLVHVFFNMPLAIRMLLQ-ALDSISIEQRQLALQLGMNPWYFFRFVEWPYLRRQILPTSSLIFMLCFA 209 (535)
Q Consensus 131 ~~~~~~~~~~~iii~~~~~~~p~~~l~~~~-~l~~i~~~~~eaA~~lGas~~~~f~~v~lP~~~p~i~~~~~l~f~~~~~ 209 (535)
T Consensus 155 -------~~~~~il~i~l~~w~~~aR~vR~~~l~i~~~~yV~AAr~~G~s~~~Ii~rhiLPni~~~liv~~~~~~~~aIl 227 (296)
T PRK09881 155 -------SLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRNSLPPLIVQASLDIGSAIL 227 (296)
T ss_pred -------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHHH
T ss_conf -------5168889999987999999999999999634999999983988678541427666188999999999999999
Q ss_pred CCHHHHHHCCCCCCCC--HHHHH
Q ss_conf 8415664036655441--14555
Q gi|255764501|r 210 SFATVLTLGGGPASTT--IELAI 230 (535)
Q Consensus 210 ~f~~~~~lgg~~~~~t--l~~~i 230 (535)
T Consensus 228 ~ea~LsFLGlG~~pp~~sWG~mi 250 (296)
T PRK09881 228 MAATLGFIGLGAQQPSAEWGAMV 250 (296)
T ss_pred HHHHHHHCCCCCCCCCCCHHHHH
T ss_conf 99999990378999998599999