HHsearch alignment for GI: 255764501 and conserved domain: PRK10592
>PRK10592 putrescine transporter subunit: membrane component of ABC superfamily; Provisional.
Probab=100.00 E-value=0 Score=268.81 Aligned_cols=239 Identities=14% Similarity=0.198 Sum_probs=206.4
Q ss_pred HHHHHHHHHHHCCCCCCCCCC------------CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999741232210001------------10013467643835479999999999997656652111122100022
Q gi|255764501|r 293 FLISCAIWFFILPLLAIIIEG------------MNAKLLLRLLQQSGLWSSFFNSIYIAINAGVLCMIFTIMLLWTKREL 360 (535)
Q Consensus 293 ~~~~~~~l~~i~pl~~ii~~~------------~~~~~~~~~~~~~~~~~a~~~Sl~~s~~~~~i~~~l~l~~a~~~~~~ 360 (535)
T Consensus 14 vi~~l~~~fl~~Pi~~iv~~SF~~~~~~~~~~gftl~~y~~lf~~~~~~~a~~~Sl~ia~~~t~i~~~lG~~~A~~l~r~ 93 (281)
T PRK10592 14 VILLLGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYGELFRDDAMMSAVGLSLTIAACAATMAAILGTIAAVVMVRF 93 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999936987678889877999999977978999999999999999999999999999999980
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC----CCCCCCCCCEEEEEEECHHHHHHHHHHHHHCCHHH
Q ss_conf 11565126799999997465532376676643012346775----66553443102465212156999999897289778
Q gi|255764501|r 361 RLRRLKFFNHIFELSELLILAVPSIVLAVGFFLLLKNTVNL----TSSSYSLIIVTNALMAVPYAVKILENPMYDLAERY 436 (535)
Q Consensus 361 ~~~~~~~~~~~~~~~~~lp~~iP~iv~~~~~~~~~~~~~~~----~~~~~~~iila~~~~~lP~~~~~l~~~l~~i~~~l 436 (535)
T Consensus 94 ---~~~~g~~~~~~l~~~Pl~vP~iv~gl~l~~~f~~~g~~~g~~~~~~~~~i~i~~~~~~~P~~~~~i~a~l~~id~~l 170 (281)
T PRK10592 94 ---GRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALGHAIGWPADRGMLTIWLAHVTFCTAYVAVVISSRLRELDRSI 170 (281)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf ---55330699999999899867899999999999984632253200237899999999999999999999998589279
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 99999739787699999999954689999999999998511011678648983028989998861798136999999999
Q gi|255764501|r 437 NALCISLQIKGINRLYLIEFKALKRLMAQTFSFSCLLSIGDFGIIALFGNDNFCTLPCYLYQQLGSYRQSDAVVTALLLL 516 (535)
Q Consensus 437 ~eaA~~lGa~~~~~f~~I~lPll~p~i~~~~~l~f~~s~~e~~~~~ll~~~~~~Tl~~~i~~~~~~~~~~~a~a~a~il~ 516 (535)
T Consensus 171 eEAA~~LGAs~~~~f~~V~LPli~Pgiiag~il~F~~s~~ef~~~~~l~g~~~~TLpv~iy~~~~~~~~p~~~A~~~l~~ 250 (281)
T PRK10592 171 EEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALATLIL 250 (281)
T ss_pred HHHHHHCCCCHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 99998819998888343541711598999999999999987778862108998456999999987179879999999999
Q ss_pred HHHHHHHHHHHHHHCCCC
Q ss_conf 999999999999714668
Q gi|255764501|r 517 SLCLGLFSLLEYLSGKEY 534 (535)
Q Consensus 517 ~i~~~~~~l~~~l~~r~~ 534 (535)
T Consensus 251 ~v~~~~~~ia~~l~~R~~ 268 (281)
T PRK10592 251 GVVGIVGFIAWYLMARAE 268 (281)
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 999999999999998889