HHsearch alignment for GI: 255764501 and conserved domain: TIGR01726
>TIGR01726 HEQRo_perm_3TM amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; InterPro: IPR010065 This entry represents one of several classes of multiple membrane spanning regions found in the inner membrane component of binding-protein-dependent transport systems. The region covered by this entry generally is predicted to contain three transmembrane helices. Substrate specificities attributed to members of this family include histidine, arginine, glutamine, glutamate, and (in Agrobacterium) the opines octopine and nopaline.; GO: 0005215 transporter activity, 0006810 transport, 0009276 1-2nm peptidoglycan-based cell wall, 0016021 integral to membrane.
Probab=92.24 E-value=0.52 Score=22.07 Aligned_cols=97 Identities=15% Similarity=0.211 Sum_probs=64.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHC
Q ss_conf 98999999999999999999999999999999970799617999999999998899999999999972278542103315
Q gi|255764501|r 49 DSYLWHVIGFTFWQALLSTLLSVIPSIFLAKSLFRRHFPGRILFLRLHTMIFVLPVFVVIMGVFTVYGRTGWIAQLCQWL 128 (535)
Q Consensus 49 ~~~~~~~l~nTl~~a~~s~~~~~~ig~~~A~~~~~~~~~~~~~~~~~~~lp~~~P~~v~~~~~~~~~~~~G~~~~~l~~~ 128 (535)
T Consensus 2 ~p~l~~G~~~Tl~~~~~~~~~g~~~Gl~~al~r~s~~~~l~~~~~~Y~~~~Rg~PlLvqlf~~yfgLP----------~~ 71 (99)
T TIGR01726 2 LPFLLKGLLLTLLISVLSILLGLVLGLLLALLRLSGNRPLRWIATVYVELFRGTPLLVQLFFIYFGLP----------LI 71 (99)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HC
T ss_conf 17899999999999999999999999999999871359999999999999962079999999998435----------42
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8887643332699999999987665489999
Q gi|255764501|r 129 GIVYQFNLYGIKGILLVHVFFNMPLAIRMLL 159 (535)
Q Consensus 129 g~~~~~~~~~~~~iii~~~~~~~p~~~l~~~ 159 (535)
T Consensus 72 Gi~l~----~~~Aa~~al~l~~~AY~aEi~R 98 (99)
T TIGR01726 72 GIRLS----PLTAAVIALTLFEGAYLAEIFR 98 (99)
T ss_pred CCCCC----HHHHHHHHHHHHHHHHHHHHHC
T ss_conf 77067----7899999999987999987653