HHsearch alignment for GI: 255764501 and conserved domain: TIGR03226
>TIGR03226 PhnU 2-aminoethylphosphonate ABC transporter, permease protein. This ABC transporter permease (membrane-spanning) component is found in a region of the salmonella typhimurium LT2 genome responsible for the catabolism of 2-aminoethylphosphonate via the phnWX pathway (GenProp0238).
Probab=100.00 E-value=0 Score=333.61 Aligned_cols=268 Identities=23% Similarity=0.303 Sum_probs=232.7
Q ss_pred CCCCCCHHHH-HHHHHHHHHHHHHHHHHHHHH-----HHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6645310368-999999999999999999999-----7416886799999569899999999999999999999999999
Q gi|255764501|r 3 KCCQPSIRNA-LWPGVIISCFLNFIFFLVVYS-----LWRHMPLISWREFMEDSYLWHVIGFTFWQALLSTLLSVIPSIF 76 (535)
Q Consensus 3 ~~~~~li~~~-l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~nTl~~a~~s~~~~~~ig~~ 76 (535)
T Consensus 35 r~~~~l~p~lll~p~ll~l~~~~~~Pl~~~~~~s~~~~~g~~gl~ny~~~f~~~~~~~al~nTl~~a~~~t~~~lvlG~~ 114 (312)
T TIGR03226 35 KPAENLAPALILALAALVLAPLFFWPLALIAELALLGAHGEIGLAAFRHFFASHDFRDALGNTLQIAFAAAAGALLLGSA 114 (312)
T ss_pred CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 44663152899999999999999999999999974189898639999999779679999999999999999999999999
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH-HCCCCC--CCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999707996179999999999988999999999999722785421033-158887--643332699999999987665
Q gi|255764501|r 77 LAKSLFRRHFPGRILFLRLHTMIFVLPVFVVIMGVFTVYGRTGWIAQLCQ-WLGIVY--QFNLYGIKGILLVHVFFNMPL 153 (535)
Q Consensus 77 ~A~~~~~~~~~~~~~~~~~~~lp~~~P~~v~~~~~~~~~~~~G~~~~~l~-~~g~~~--~~~~~~~~~iii~~~~~~~p~ 153 (535)
T Consensus 115 lA~~L~r~~f~g~~~l~~ll~lp~~lP~~v~a~a~~~l~~~~G~ln~~L~~l~gl~~~p~~~l~s~~gVvla~i~~~~Pf 194 (312)
T TIGR03226 115 LAAILFFIPFPGAELIGRFLDLFIAFPSFLIAFAFIFIYGSAGLLNGALMRAFAFDAPPLDFLFGAGGVILAEITFFTPF 194 (312)
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999962376289999999999998899999999999835770779999962866774577740999999999998999
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf 48999999850888999999862147146775442001664024577787776525841566403665544114555677
Q gi|255764501|r 154 AIRMLLQALDSISIEQRQLALQLGMNPWYFFRFVEWPYLRRQILPTSSLIFMLCFASFATVLTLGGGPASTTIELAIYQS 233 (535)
Q Consensus 154 ~~l~~~~~l~~i~~~~~eaA~~lGas~~~~f~~v~lP~~~p~i~~~~~l~f~~~~~~f~~~~~lgg~~~~~tl~~~iy~~ 233 (535)
T Consensus 195 ~~l~~~a~l~~id~~l~EAA~~lGAs~~~~Fr~VtLPll~P~i~ag~lL~Fi~~~~~F~~~~~lgg~-~~~tl~~~Iy~~ 273 (312)
T TIGR03226 195 VMRPLLAAFAQIDKRLLEAASILGAHGLMLAGQVIFPAALPAIAAGGILCFLLTLNEFGILLFIGAA-GLITLPMAIYSK 273 (312)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC-CCEEHHHHHHHH
T ss_conf 9999999999689789999988499988867874278468999999999999999775411344089-970179999999
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 76532000000134557889999985301343322111
Q gi|255764501|r 234 LSYDFDLNKAAFLSLVQIFCCLSLVLFNQKFNVSFSSG 271 (535)
Q Consensus 234 ~~~~~~~~~aa~la~il~~~~~~~~~~~~~~~~~~~~~ 271 (535)
T Consensus 274 ~~~~~d~~~AaAlavillv~~l~l~~l~r~~~rR~~~~ 311 (312)
T TIGR03226 274 AILDIDLPAAAAGALIMIALSLALFALYRLAARRAGEG 311 (312)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 98757989999999999999999999999998763489