HHsearch alignment for GI: 255764501 and conserved domain: TIGR03416

>TIGR03416 ABC_choXWV_perm choline ABC transporter, permease protein.
Probab=99.74  E-value=8.1e-17  Score=106.19  Aligned_cols=178  Identities=15%  Similarity=0.246  Sum_probs=133.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             38354799999999999976566521111221000221156512679999999746553237667664301234677566
Q gi|255764501|r  324 QQSGLWSSFFNSIYIAINAGVLCMIFTIMLLWTKRELRLRRLKFFNHIFELSELLILAVPSIVLAVGFFLLLKNTVNLTS  403 (535)
Q Consensus       324 ~~~~~~~a~~~Sl~~s~~~~~i~~~l~l~~a~~~~~~~~~~~~~~~~~~~~~~~lp~~iP~iv~~~~~~~~~~~~~~~~~  403 (535)
T Consensus        80 ~~~G~W~~am~Tlalv~~av~la~~iGiPlGI~~~~s-----~~~~~~l~pild~mQTiP~fvyLip~i~lfG-------  147 (267)
T TIGR03416        80 INQGYWEETVETLALVLSATVVCMVIGVPLGIAAAHR-----PWLYAIMRPVLDLMQTLPTFVYLIPALVLFG-------  147 (267)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC-------
T ss_conf             9871589999999999999999999999999999816-----9999999999987431546799999999948-------


Q ss_pred             CCCCCCCEEEEEEECHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             55344310246521215699999989728977899999739787699999999954689999999999998511011678
Q gi|255764501|r  404 SSYSLIIVTNALMAVPYAVKILENPMYDLAERYNALCISLQIKGINRLYLIEFKALKRLMAQTFSFSCLLSIGDFGIIAL  483 (535)
Q Consensus       404 ~~~~~iila~~~~~lP~~~~~l~~~l~~i~~~l~eaA~~lGa~~~~~f~~I~lPll~p~i~~~~~l~f~~s~~e~~~~~l  483 (535)
T Consensus       148 iG~~~aiia~~iya~~P~ir~T~~Gir~V~~~~iEaa~~~G~s~~q~l~~V~lPlA~P~Il~G~nq~i~~al~mvviaa~  227 (267)
T TIGR03416       148 LGMVPGLISTVIFAIPAPIRLTHLGISSVPQELVEAGEAFGATPSQLLWKVELPYAMPQIMAGLTQTIMLSLSMVVIAAL  227 (267)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             87056999999999889999999999856768999999839989889799418415899999999999999999999999


Q ss_pred             ECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf             648983028989998861798136999999999
Q gi|255764501|r  484 FGNDNFCTLPCYLYQQLGSYRQSDAVVTALLLL  516 (535)
Q Consensus       484 l~~~~~~Tl~~~i~~~~~~~~~~~a~a~a~il~  516 (535)
T Consensus       228 IGa~G---LG~~v~~~l~~~~~g~~l~~gi~iv  257 (267)
T TIGR03416       228 VGADG---LGVPVVRALNTVNIALGFEAGLAIV  257 (267)
T ss_pred             HCCCC---CHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf             67885---3699999986335688999999999