RPSBLAST alignment for GI: 255764501 and conserved domain: COG1177
>gnl|CDD|31370 COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]. Length = 267
Score = 58.3 bits (141), Expect = 5e-09
Identities = 50/262 (19%), Positives = 89/262 (33%), Gaps = 19/262 (7%)
Query: 284 SRWSRWWDFFLISCAIWFFILPLLAIIIEGMNA-------------KLLLRLLQQSGLWS 330
W+R + ++ + F LPLL +++ N+ K L L S
Sbjct: 6 RIWARIFLKLYLALVLLFLYLPLLVLVLYSFNSSRLGLVFPPGFSLKWYGALFSDPRLLS 65
Query: 331 SFFNSIYIAINAGVLCMIFTIMLLWTKRELRLRRLKFFNHIFELSELLILAVPSIVLAVG 390
+ +NS+ IA+ + +L + + R R + LL L VP IV +
Sbjct: 66 ALWNSLLIALLSALLATLLGTLAALALARYRFRGKNLLEGLI----LLPLVVPDIVTGIA 121
Query: 391 FFLLLKNTVNLTSSSYSLIIVTNALMAVPYAVKILENPMYDLAERYNALCISLQIKGINR 450
LL + I++ + + A+P+ V ++ + L
Sbjct: 122 LLLLF--AALGLPGGFWTIVLAHIVFALPFVVVVVSARLQGFDRSLEEAARDLGASPWQT 179
Query: 451 LYLIEFKALKRLMAQTFSFSCLLSIGDFGIIALFGNDNFCTLPCYLYQQLGSYRQSDAVV 510
+ + + + LS +F I F TLP +Y + +
Sbjct: 180 FRRVTLPLILPGILSGALLAFTLSFDEFVITFFLAGPGFTTLPLQIYSMIRRGITPEINA 239
Query: 511 TALLLLSLCLGLFSLLEYLSGK 532
+ LLL L L L L L +
Sbjct: 240 LSTLLLLLSLLLILLASRLLRR 261