BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|255764504|ref|YP_003064930.2| DNA-methyltransferase MKpn2kI [Candidatus Liberibacter asiaticus str. psy62] (101 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|78777762|ref|YP_394077.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM 1251] gi|78498302|gb|ABB44842.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM 1251] Length = 328 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 60/101 (59%), Positives = 78/101 (77%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+GVPQ RER+YI+ FL+ VEF+FP P+ ++GDILE+ +D+K TIS+KLW G Sbjct: 163 LNAKDYGVPQNRERIYIVGFLDNEVEFEFPKPIEKYVKVGDILEDKVDEKYTISDKLWAG 222 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 HQ+RK +K G GFGY +F ENS T+T+SARYYKDGSEI Sbjct: 223 HQRRKIEHKAKGNGFGYSMFNENSIYTSTISARYYKDGSEI 263 >gi|150026187|ref|YP_001297013.1| type II modification methyltransferase [Flavobacterium psychrophilum JIP02/86] gi|149772728|emb|CAL44211.1| Probable type II modification methyltransferase [Flavobacterium psychrophilum JIP02/86] Length = 335 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 63/101 (62%), Positives = 83/101 (82%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 +KA +FG+PQ RER+YI+ FL+ S++FKFPTP + ++GDILE+ +D+K TIS++LWEG Sbjct: 152 LKAKEFGLPQNRERIYIVGFLDNSIKFKFPTPTKLPTKVGDILEQKVDEKYTISDRLWEG 211 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 HQ+RK NK GKGFG+G+ ENS TNT+SARYYKDGSEI Sbjct: 212 HQRRKIANKEKGKGFGFGIVNENSEYTNTISARYYKDGSEI 252 >gi|313667524|ref|YP_004047808.1| cytosine-specific methyltransferase [Neisseria lactamica ST-640] gi|309378245|emb|CBX23130.1| DNA cytosine methyltransferase M.NlaX [Neisseria lactamica Y92-1009] gi|313004986|emb|CBN86414.1| cytosine-specific methyltransferase [Neisseria lactamica 020-06] Length = 313 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 65/101 (64%), Positives = 81/101 (80%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 +KA DFG+PQ RER+Y++ FLN V+F+FP P+G +GDILE + D+K TIS+KLW+G Sbjct: 145 LKARDFGIPQNRERIYLVGFLNHDVDFRFPQPIGQATAVGDILEAYPDEKYTISDKLWQG 204 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 HQ+RK N+ AGKGFGYGLF SA TNT+SARYYKDGSEI Sbjct: 205 HQRRKAENRAAGKGFGYGLFNAESAYTNTISARYYKDGSEI 245 >gi|224418923|ref|ZP_03656929.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT 98-5491] gi|253827874|ref|ZP_04870759.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT 98-5491] gi|313142438|ref|ZP_07804631.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT 98-5491] gi|253511280|gb|EES89939.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT 98-5491] gi|313131469|gb|EFR49086.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT 98-5491] Length = 328 Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats. Identities = 60/101 (59%), Positives = 73/101 (72%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+GVPQ RER+ I+ F + +V F FP P +LGDILE+ D+K TISN+LWE Sbjct: 164 LNARDYGVPQNRERIIIVGFKDHNVHFDFPKPYNYSVKLGDILEKTPDEKYTISNRLWES 223 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 HQ+RKE K G GFGY LF ENS T+T+SARYYKDGSEI Sbjct: 224 HQQRKELQKAKGNGFGYRLFDENSPYTSTISARYYKDGSEI 264 >gi|127471|sp|P24581|MTNX_NEILA RecName: Full=Cytosine-specific methyltransferase NlaX; Short=M.NlaX gi|45004|emb|CAA38357.1| cytosine-specific methyltransferase of NlaIII [Neisseria lactamica] Length = 313 Score = 143 bits (360), Expect = 9e-33, Method: Composition-based stats. Identities = 64/101 (63%), Positives = 81/101 (80%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 +KA DFG+PQ RER+Y++ FLN V+F+FP P+G +GDILE + D+K TIS+KLW+G Sbjct: 145 LKARDFGIPQNRERIYLVGFLNHDVDFRFPQPIGQATAVGDILEAYPDEKYTISDKLWQG 204 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 +Q+RK N+ AGKGFGYGLF SA TNT+SARYYKDGSEI Sbjct: 205 YQRRKAENRAAGKGFGYGLFNAESAYTNTISARYYKDGSEI 245 >gi|261400948|ref|ZP_05987073.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970] gi|269209191|gb|EEZ75646.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970] Length = 313 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 64/101 (63%), Positives = 81/101 (80%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 +KA DFG+PQ RER+Y++ FLN V+F+FP P+G +GDILE + D+K TIS+KLW+G Sbjct: 145 LKARDFGIPQNRERIYLVGFLNHDVDFRFPQPIGQATAVGDILEAYPDEKYTISDKLWQG 204 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 +Q+RK N+ AGKGFGYGLF SA TNT+SARYYKDGSEI Sbjct: 205 YQRRKAENRAAGKGFGYGLFNAESAYTNTISARYYKDGSEI 245 >gi|315637499|ref|ZP_07892709.1| modification methylase EcoRII [Arcobacter butzleri JV22] gi|315478217|gb|EFU68940.1| modification methylase EcoRII [Arcobacter butzleri JV22] Length = 326 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 65/101 (64%), Positives = 81/101 (80%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFGVPQ RER+YII FL+ S++FK+P PL K RLGDIL++++DDK TIS+KLW G Sbjct: 163 LNAKDFGVPQNRERIYIIAFLDHSIDFKYPKPLNKKNRLGDILDDNVDDKYTISDKLWAG 222 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 HQ+RK+ +K G GFGY LF NS T+T+SARYYKDGSEI Sbjct: 223 HQRRKKEHKEKGNGFGYSLFTHNSEYTSTISARYYKDGSEI 263 >gi|50914506|ref|YP_060478.1| Type II restriction-modification system methylation subunit [Streptococcus pyogenes MGAS10394] gi|40218542|gb|AAR83196.1| type II modification methylase [Streptococcus pyogenes] gi|50261587|gb|AAT72355.1| methylase [Streptococcus pyogenes] gi|50903580|gb|AAT87295.1| Type II restriction-modification system methylation subunit [Streptococcus pyogenes MGAS10394] gi|114386439|gb|ABI74454.1| DNA methyltransferase [Streptococcus pyogenes] Length = 408 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 61/104 (58%), Positives = 75/104 (72%), Gaps = 4/104 (3%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE----FKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 KA DFGVPQ RER+YI+ F V F+FP P ++ +LG+IL+ +D+K TIS+KL Sbjct: 243 KARDFGVPQNRERIYIVGFDKTCVNNFSEFRFPEPFHLETKLGNILQTDVDEKYTISDKL 302 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 WEGHQ+RK +K G GFGY LF +S TNTLSARYYKDGSEI Sbjct: 303 WEGHQRRKAEHKTKGNGFGYSLFNADSPYTNTLSARYYKDGSEI 346 >gi|319407456|emb|CBI81106.1| Cytosine-specific methyltransferase NlaX [Bartonella sp. 1-1C] Length = 307 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 68/101 (67%), Positives = 80/101 (79%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 +KA DFGVPQ RER+YI+ FL+ S FKFP+P+ IK R+GDIL+ +D+K TISN LW G Sbjct: 147 LKARDFGVPQNRERIYIVGFLDHSTNFKFPSPMNIKTRVGDILDNDVDEKYTISNTLWHG 206 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 HQ+RK NK+ GKGFGYGLF S TNTLSARYYKDGSEI Sbjct: 207 HQRRKAQNKLNGKGFGYGLFNMESPYTNTLSARYYKDGSEI 247 >gi|119026301|ref|YP_910146.1| DNA-methyltransferase MKpn2kI [Bifidobacterium adolescentis ATCC 15703] gi|118765885|dbj|BAF40064.1| DNA-methyltransferase MKpn2kI [Bifidobacterium adolescentis ATCC 15703] Length = 383 Score = 137 bits (344), Expect = 7e-31, Method: Composition-based stats. Identities = 66/105 (62%), Positives = 79/105 (75%), Gaps = 4/105 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV----EFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A DFGVPQ RER+YI+ F V +FK+P P I RLGDILE+++DDK TIS+ Sbjct: 214 LAAKDFGVPQNRERIYIVGFDKEQVPNWADFKYPEPPCIPTRLGDILEKNVDDKYTISDA 273 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 LW GHQ+RK+ NK AGKGFGYGLF E+S NT+SARYYKDGSEI Sbjct: 274 LWAGHQRRKQENKKAGKGFGYGLFDEDSPYANTISARYYKDGSEI 318 >gi|299536257|ref|ZP_07049570.1| DNA-methyltransferase MKpn2kI [Lysinibacillus fusiformis ZC1] gi|298728243|gb|EFI68805.1| DNA-methyltransferase MKpn2kI [Lysinibacillus fusiformis ZC1] Length = 403 Score = 136 bits (343), Expect = 8e-31, Method: Composition-based stats. Identities = 61/105 (58%), Positives = 76/105 (72%), Gaps = 4/105 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLN----PSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 ++A DFGVPQ RER++++ F V FKFP PL LGDIL + +D+K TIS+K Sbjct: 212 LRAADFGVPQNRERVFMVGFNKRIGGELVPFKFPKPLSTPTNLGDILFKKVDEKYTISDK 271 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 L+EGH +RKE +K G GFG+ LF ENS+ TNTLSARYYKDGSEI Sbjct: 272 LYEGHLRRKEMHKQKGNGFGFSLFDENSSYTNTLSARYYKDGSEI 316 >gi|255066464|ref|ZP_05318319.1| modification methylase EcoRII [Neisseria sicca ATCC 29256] gi|298369378|ref|ZP_06980696.1| modification methylase EcoRII [Neisseria sp. oral taxon 014 str. F0314] gi|255049344|gb|EET44808.1| modification methylase EcoRII [Neisseria sicca ATCC 29256] gi|298283381|gb|EFI24868.1| modification methylase EcoRII [Neisseria sp. oral taxon 014 str. F0314] Length = 357 Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 56/101 (55%), Positives = 70/101 (69%), Gaps = 2/101 (1%) Query: 3 ACDFGVPQRRERLYIIDFL--NPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 A DF +PQ RER+YI+ F + +F+FP PL ++GDILE D K TIS++LW+G Sbjct: 192 AKDFNLPQNRERIYIVGFRSAKDAAQFEFPHPLPKTVKVGDILESFPDAKYTISDRLWQG 251 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 H +RK +K G GFGYGLF S TNT+SARYYKDGSEI Sbjct: 252 HLRRKAEHKQKGNGFGYGLFNAQSEYTNTISARYYKDGSEI 292 >gi|157737722|ref|YP_001490405.1| DNA (cytosine-5-)-methyltransferase [Arcobacter butzleri RM4018] gi|157699576|gb|ABV67736.1| DNA (Cytosine-5-)-methyltransferase [Arcobacter butzleri RM4018] Length = 326 Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 62/101 (61%), Positives = 78/101 (77%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A +FGVPQ RER+YII FL+ S++FK+P L K RLGDIL+ ++DDK TIS+KLW G Sbjct: 163 LNARNFGVPQNRERIYIIAFLDHSIDFKYPKSLNKKNRLGDILDNNVDDKYTISDKLWAG 222 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 HQ+RK+ +K G GFGY LF S T+T+SARYYKDGSEI Sbjct: 223 HQRRKKEHKEKGNGFGYSLFTHESEYTSTISARYYKDGSEI 263 >gi|294788070|ref|ZP_06753314.1| modification methylase EcoRII [Simonsiella muelleri ATCC 29453] gi|294484363|gb|EFG32046.1| modification methylase EcoRII [Simonsiella muelleri ATCC 29453] Length = 355 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 51/106 (48%), Positives = 69/106 (65%), Gaps = 5/106 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-----SVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + A +FGVPQ RER+YI+ N +++F + ++GDIL+ +D+K TIS+ Sbjct: 184 LNAKNFGVPQNRERIYIVAIRNDFNPTFNLDFDKLKNTKVNCQVGDILQNQVDEKYTISD 243 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 KLW GHQ+RK + G GFGY LF S T+T+SARYYKDGSEI Sbjct: 244 KLWAGHQRRKAEHIEKGNGFGYSLFNAQSPYTSTISARYYKDGSEI 289 >gi|1709152|sp|P50185|MTD5_DACSA RecName: Full=Modification methylase DsaV; Short=M.DsaV; AltName: Full=Cytosine-specific methyltransferase DsaV gi|505694|gb|AAA86046.1| DsaV methyltransferase [Dactylococcopsis salina] Length = 351 Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats. Identities = 48/104 (46%), Positives = 76/104 (73%), Gaps = 3/104 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A DF +PQ+RER++I+ F + + + F FP P+ + ++GD+LE+ +D+K TI++++ Sbjct: 146 ISATDFNLPQKRERIFIVGFQDKNNKNLIFDFPKPIELTAKVGDLLEKEVDEKYTITDRM 205 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 WEGHQ RK+ ++ G GFG+ L NS+ T T+SARYYKDGSE+ Sbjct: 206 WEGHQNRKKAHRKRGNGFGFSLVNRNSSYTRTISARYYKDGSEV 249 >gi|170729237|ref|YP_001763263.1| DNA-cytosine methyltransferase [Shewanella woodyi ATCC 51908] gi|169814584|gb|ACA89168.1| DNA-cytosine methyltransferase [Shewanella woodyi ATCC 51908] Length = 416 Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats. Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 1/102 (0%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 M++ DFGVPQ R+R+YII + + +E F++P P G ++ DILE +K TIS+KLW Sbjct: 255 MRSVDFGVPQNRQRIYIILWKDGLIEQFQYPKPSGKDTKVADILESEPCEKLTISDKLWA 314 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 GH++RK NK GKGFGYGL S TNT+SARYYKDGSEI Sbjct: 315 GHKRRKIENKAKGKGFGYGLVSPESEYTNTISARYYKDGSEI 356 >gi|321310755|ref|YP_004193084.1| C-5 cytosine-specific DNA methylase [Mycoplasma haemofelis str. Langford 1] gi|319802599|emb|CBY93245.1| C-5 cytosine-specific DNA methylase [Mycoplasma haemofelis str. Langford 1] Length = 362 Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 62/105 (59%), Positives = 71/105 (67%), Gaps = 4/105 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV----EFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 ++A DFGVPQ RER+YI+ F +V FKFP LGDILE +DDK TISN Sbjct: 196 LRARDFGVPQNRERIYIVGFDKDAVQGYRNFKFPEATHKNTCLGDILESEVDDKYTISNT 255 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 LWEGH++RK NK GKGFGY LF S NTLSARYYKDGSE+ Sbjct: 256 LWEGHKRRKVENKKKGKGFGYSLFNFESPYANTLSARYYKDGSEV 300 >gi|1657420|gb|AAC45971.1| DNA cytosine methyltransferase M.SenPI [Salmonella enterica subsp. enterica serovar Enteritidis] Length = 379 Score = 133 bits (336), Expect = 5e-30, Method: Composition-based stats. Identities = 66/103 (64%), Positives = 76/103 (73%), Gaps = 4/103 (3%) Query: 3 ACDFGVPQRRERLYIIDFLNPSV----EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 A DFGVPQ RER+YI+ F V F FPTPL K R+GDILE+ +D+K T+S+ LW Sbjct: 215 AKDFGVPQNRERIYIVGFNKEKVRNHEHFTFPTPLKTKTRVGDILEKSVDNKYTLSDALW 274 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 GHQ+RK N AGKGFGYGLF ENS TNT+SARYYKDGSEI Sbjct: 275 NGHQRRKLVNAAAGKGFGYGLFNENSPYTNTISARYYKDGSEI 317 >gi|1871451|dbj|BAA11167.1| C5-cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi] gi|3421011|emb|CAA76526.1| M.Ecl18kI (DNA-methyltransferase) [Enterobacter cloacae] Length = 379 Score = 133 bits (336), Expect = 5e-30, Method: Composition-based stats. Identities = 66/103 (64%), Positives = 76/103 (73%), Gaps = 4/103 (3%) Query: 3 ACDFGVPQRRERLYIIDFLNPSV----EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 A DFGVPQ RER+YI+ F V F FPTPL K R+GDILE+ +D+K T+S+ LW Sbjct: 215 AKDFGVPQNRERIYIVGFNKEKVRNHEHFTFPTPLKTKTRVGDILEKSVDNKYTLSDALW 274 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 GHQ+RK N AGKGFGYGLF ENS TNT+SARYYKDGSEI Sbjct: 275 NGHQRRKLVNAAAGKGFGYGLFNENSPYTNTISARYYKDGSEI 317 >gi|32470131|ref|NP_863573.1| DNA-methyltransferase MKpn2kI [Klebsiella pneumoniae] gi|462656|sp|P34879|MTS2_SHISO RecName: Full=Modification methylase SsoII; Short=M.SsoII; AltName: Full=Cytosine-specific methyltransferase SsoII gi|11559818|gb|AAG38101.1|AF300473_2 DNA-methyltransferase MKpn2kI [Klebsiella pneumoniae] gi|294244|gb|AAA98279.1| C5-cytosine methylase [Plasmid P4] Length = 379 Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats. Identities = 66/103 (64%), Positives = 76/103 (73%), Gaps = 4/103 (3%) Query: 3 ACDFGVPQRRERLYIIDFLNPSV----EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 A DFGVPQ RER+YI+ F V F FPTPL K R+GDILE+ +D+K T+S+ LW Sbjct: 215 AKDFGVPQNRERIYIVGFNKEKVRNHEHFTFPTPLKTKTRVGDILEKSVDNKYTLSDALW 274 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 GHQ+RK N AGKGFGYGLF ENS TNT+SARYYKDGSEI Sbjct: 275 NGHQRRKLVNAAAGKGFGYGLFNENSPYTNTISARYYKDGSEI 317 >gi|323495143|ref|ZP_08100228.1| DNA-methyltransferase MKpn2kI [Vibrio brasiliensis LMG 20546] gi|323310583|gb|EGA63762.1| DNA-methyltransferase MKpn2kI [Vibrio brasiliensis LMG 20546] Length = 443 Score = 133 bits (335), Expect = 7e-30, Method: Composition-based stats. Identities = 56/118 (47%), Positives = 70/118 (59%), Gaps = 17/118 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-------FKFPTPLGIKPRLGDILEEHID----- 48 ++A DFGVPQ RER++II F F +P P ++GDIL+ + Sbjct: 248 LRAADFGVPQNRERIFIIGFDKDYYTGVDFDQVFNWPEPPKTPTKVGDILQSDQELEAEA 307 Query: 49 -----DKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 D TIS++LWEGHQKRKE +K G GFGY L+ S TNT+SARYYKDGSEI Sbjct: 308 KVIGKDCYTISDRLWEGHQKRKEGHKTKGNGFGYTLYNAESEYTNTISARYYKDGSEI 365 >gi|283471715|emb|CAQ50926.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Staphylococcus aureus subsp. aureus ST398] Length = 397 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 59/105 (56%), Positives = 73/105 (69%), Gaps = 4/105 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV----EFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 ++A DFG PQ RER+YI+ F + F FP PL I+ LG ILE +++DK TIS++ Sbjct: 227 LRARDFGCPQNRERIYIVGFDKQQIKNAENFSFPEPLPIETSLGSILESNVNDKYTISDR 286 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 LW GHQ+RK +K G GFGY +F E S TNTLSARYYKDGSEI Sbjct: 287 LWYGHQRRKREHKAKGNGFGYSIFNETSPYTNTLSARYYKDGSEI 331 >gi|323968851|gb|EGB64187.1| DNA-cytosine methyltransferase [Escherichia coli TA007] Length = 282 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 66/103 (64%), Positives = 76/103 (73%), Gaps = 4/103 (3%) Query: 3 ACDFGVPQRRERLYIIDFLNPSV----EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 A DFGVPQ RER+YI+ F V F FPTPL K R+GDILE+ +D+K T+S+ LW Sbjct: 118 AKDFGVPQNRERIYIVGFNKEKVRNHEHFTFPTPLKTKTRVGDILEKSVDNKYTLSDALW 177 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 GHQ+RK N AGKGFGYGLF ENS TNT+SARYYKDGSEI Sbjct: 178 NGHQRRKLVNAAAGKGFGYGLFNENSPYTNTISARYYKDGSEI 220 >gi|152998369|ref|YP_001343204.1| DNA-cytosine methyltransferase [Marinomonas sp. MWYL1] gi|150839293|gb|ABR73269.1| DNA-cytosine methyltransferase [Marinomonas sp. MWYL1] Length = 417 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 57/102 (55%), Positives = 79/102 (77%), Gaps = 1/102 (0%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 +K+ DFGVPQ R+R+YI+ + + ++ F +P +G+ R+GDILE + + K TIS++LWE Sbjct: 255 LKSVDFGVPQNRQRIYIVLWKDGEIDKFDYPESMGLDTRVGDILEANPNPKLTISDRLWE 314 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 GHQ+RK NKI GKGFGYG+ E+S TNT+SARYYKDGSE+ Sbjct: 315 GHQRRKMQNKINGKGFGYGIVTEDSPYTNTISARYYKDGSEV 356 >gi|262402975|ref|ZP_06079535.1| DNA-methyltransferase MKpn2kI [Vibrio sp. RC586] gi|262350474|gb|EEY99607.1| DNA-methyltransferase MKpn2kI [Vibrio sp. RC586] Length = 410 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 57/118 (48%), Positives = 71/118 (60%), Gaps = 17/118 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-------FKFPTPLGIKPRLGDILEEHI------ 47 ++A DFGVPQ RER++I+ F F +P R+GDILE Sbjct: 216 LRAADFGVPQNRERIFIVGFDKNYFRGVNFDSLFSWPEAPKTPTRVGDILEPQHVLDEEK 275 Query: 48 ----DDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 D+ TIS+KLW+GH+KRKE +KI G GFGY LF +S TNT+SARYYKDGSEI Sbjct: 276 QALGKDRYTISDKLWDGHKKRKEEHKIKGNGFGYSLFNADSEYTNTISARYYKDGSEI 333 >gi|124024750|ref|YP_001013866.1| site-specific DNA methylase [Prochlorococcus marinus str. NATL1A] gi|123959818|gb|ABM74601.1| Site-specific DNA methylase [Prochlorococcus marinus str. NATL1A] Length = 305 Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats. Identities = 50/101 (49%), Positives = 75/101 (74%), Gaps = 1/101 (0%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFGVPQ RER++I ++ + F+FP P ++ ++GDIL++++ DK T+S+K+W Sbjct: 146 LNAKDFGVPQNRERIFIFGYI-DFIFFEFPEPSKVQTKVGDILDDNVPDKFTLSDKMWTN 204 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 +RKENN+ G GFG+ LF ++S T+T+SARYYKDGSEI Sbjct: 205 AIRRKENNRKRGYGFGFSLFDKDSEYTSTISARYYKDGSEI 245 >gi|255764504|ref|YP_003064930.2| DNA-methyltransferase MKpn2kI [Candidatus Liberibacter asiaticus str. psy62] gi|254547855|gb|ACT56990.2| DNA-methyltransferase MKpn2kI [Candidatus Liberibacter asiaticus str. psy62] Length = 101 Score = 130 bits (326), Expect = 7e-29, Method: Composition-based stats. Identities = 101/101 (100%), Positives = 101/101 (100%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG Sbjct: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI Sbjct: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 >gi|256760956|ref|ZP_05501536.1| type II restriction-modification system methylation subunit [Enterococcus faecalis T3] gi|256682207|gb|EEU21902.1| type II restriction-modification system methylation subunit [Enterococcus faecalis T3] Length = 405 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 58/104 (55%), Positives = 74/104 (71%), Gaps = 4/104 (3%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE----FKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 KA DFG PQ RER+YI+ F S++ F+FPT K +GDILE+ +D+K TIS+ L Sbjct: 237 KARDFGAPQNRERIYIVGFDKLSLKNIDLFEFPTAPKPKTCVGDILEDSVDEKYTISDTL 296 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 WEGH++RK +K G GFG+ LF +S TNT+SARYYKDGSEI Sbjct: 297 WEGHKRRKLEHKEKGNGFGFSLFNSSSPYTNTISARYYKDGSEI 340 >gi|260554958|ref|ZP_05827179.1| DNA-methyltransferase MKpn2kI [Acinetobacter baumannii ATCC 19606] gi|260411500|gb|EEX04797.1| DNA-methyltransferase MKpn2kI [Acinetobacter baumannii ATCC 19606] Length = 413 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 56/114 (49%), Positives = 72/114 (63%), Gaps = 13/114 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--------FKFPTPLGIKPRLGDILEEHIDDK-- 50 ++A DFGVPQ RER++++ F F +P P + RLGDILE+ K Sbjct: 222 LRAADFGVPQNRERIFLVGFDKNYFGEECNFDQLFSWPVPPKKQTRLGDILEDVSKLKKS 281 Query: 51 ---STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 TIS++LW+GHQ+RKE + I G GFGY L+ +S TNTLSARYYKDGSEI Sbjct: 282 EDVYTISDRLWQGHQRRKEEHGIKGNGFGYTLYTGDSPYTNTLSARYYKDGSEI 335 >gi|325989685|ref|YP_004249384.1| cytosine-specific methyltransferase [Mycoplasma suis KI3806] gi|323574770|emb|CBZ40430.1| Cytosine-specific methyltransferase [Mycoplasma suis] Length = 326 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 57/105 (54%), Positives = 77/105 (73%), Gaps = 4/105 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV----EFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 +K+ DFG+PQ RER+YI+ F V F P+P +GDILE+ +++K TIS+ Sbjct: 160 LKSRDFGIPQNRERIYIVGFNKDLVESYENFSMPSPTLKATCVGDILEKEVNNKYTISDL 219 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 LWEGH++RKE +K+ G+GFG+ LF ENS+ TNT+SARYYKDGSEI Sbjct: 220 LWEGHKRRKEEHKLKGRGFGFSLFSENSSYTNTISARYYKDGSEI 264 >gi|325973250|ref|YP_004250314.1| cytosine-specific DNA modification methylase, HpaII-like protein [Mycoplasma suis str. Illinois] gi|323651852|gb|ADX97934.1| cytosine-specific DNA modification methylase, HpaII-like protein [Mycoplasma suis str. Illinois] Length = 326 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 57/105 (54%), Positives = 77/105 (73%), Gaps = 4/105 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV----EFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 +K+ DFG+PQ RER+YI+ F V F P+P +GDILE+ +++K TIS+ Sbjct: 160 LKSRDFGIPQNRERIYIVGFNKDLVESYENFSMPSPTLKATCVGDILEKEVNNKYTISDL 219 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 LWEGH++RKE +K+ G+GFG+ LF ENS+ TNT+SARYYKDGSEI Sbjct: 220 LWEGHKRRKEEHKLKGRGFGFSLFSENSSYTNTISARYYKDGSEI 264 >gi|319893523|ref|YP_004150398.1| DNA-cytosine methyltransferase [Staphylococcus pseudintermedius HKU10-03] gi|317163219|gb|ADV06762.1| DNA-cytosine methyltransferase [Staphylococcus pseudintermedius HKU10-03] Length = 394 Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 55/105 (52%), Positives = 73/105 (69%), Gaps = 4/105 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV----EFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 +KA DFGVPQ RER+YI+ F + ++ P P + LG ILE+++D+K TIS+K Sbjct: 227 LKAKDFGVPQNRERIYIVGFDKRRIKKWRDYIPPKPPKSQTLLGKILEKNVDEKYTISDK 286 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 LW GH++RK +K+ G GFG+ L+ S TNTLSARYYKDGSEI Sbjct: 287 LWSGHKRRKAEHKLKGNGFGFTLYNGESPYTNTLSARYYKDGSEI 331 >gi|462657|sp|P34877|MTSA_LACLC RecName: Full=Modification methylase ScrFIA; Short=M.ScrFI-A; Short=M.ScrFIA; AltName: Full=Cytosine-specific methyltransferase ScrFIA gi|149493|gb|AAA25220.1| SCRFI methylase [Lactococcus lactis] gi|2327034|gb|AAB66696.1| 5-methyl-cytosine methyltransferase [Lactococcus lactis subsp. cremoris] Length = 389 Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 65/104 (62%), Positives = 79/104 (75%), Gaps = 4/104 (3%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV----EFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 KA DFG+PQ RER+YI+ F S+ +F+ PTPL K R+G+ILE +DDK TIS+KL Sbjct: 221 KARDFGLPQNRERIYIVGFDRKSISNYSDFQMPTPLQEKTRVGNILESVVDDKYTISDKL 280 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 W+GHQ+RK NK GKGFGY LF ++S TNTLSARYYKDGSEI Sbjct: 281 WDGHQRRKTENKKNGKGFGYTLFNQDSEYTNTLSARYYKDGSEI 324 >gi|229530048|ref|ZP_04419438.1| type II restriction-modification system methylation subunit [Vibrio cholerae 12129(1)] gi|229333822|gb|EEN99308.1| type II restriction-modification system methylation subunit [Vibrio cholerae 12129(1)] Length = 270 Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats. Identities = 56/118 (47%), Positives = 69/118 (58%), Gaps = 17/118 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-------FKFPTPLGIKPRLGDILEEHID----- 48 ++A DFG PQ RER++II F F +P R+GDIL+ + Sbjct: 76 LRAADFGSPQNRERIFIIGFNKDEFPNIDFDKLFSWPKAPKTPTRVGDILQTQQELELDK 135 Query: 49 -----DKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 D+ TIS+KLWEGHQKRK +K G GFGY LF +S TNT+SARYYKDGSEI Sbjct: 136 KLHGKDRFTISDKLWEGHQKRKAEHKTKGNGFGYSLFNADSEYTNTISARYYKDGSEI 193 >gi|315931535|gb|EFV10502.1| DNA (cytosine-5) methyltransferase [Campylobacter jejuni subsp. jejuni 327] Length = 284 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 57/106 (53%), Positives = 73/106 (68%), Gaps = 5/106 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-----EFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + A +FG+PQ RER+YI+ FL F + IK +LGDILE+++D+K TIS+ Sbjct: 151 LNARNFGIPQNRERIYIVAFLKNKFKNISFNFNELKNIEIKSKLGDILEKNVDEKYTISD 210 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 KLW GHQ+RK +K G GFGY LF NS T+T+SARYYKDGSEI Sbjct: 211 KLWAGHQRRKLEHKKKGNGFGYSLFNHNSDYTSTISARYYKDGSEI 256 >gi|157414453|ref|YP_001481709.1| hypothetical protein C8J_0133 [Campylobacter jejuni subsp. jejuni 81116] gi|283955585|ref|ZP_06373079.1| hypothetical protein C1336_000030018 [Campylobacter jejuni subsp. jejuni 1336] gi|157385417|gb|ABV51732.1| hypothetical protein C8J_0133 [Campylobacter jejuni subsp. jejuni 81116] gi|283792928|gb|EFC31703.1| hypothetical protein C1336_000030018 [Campylobacter jejuni subsp. jejuni 1336] Length = 321 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 57/106 (53%), Positives = 73/106 (68%), Gaps = 5/106 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-----EFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + A +FG+PQ RER+YI+ FL F + IK +LGDILE+++D+K TIS+ Sbjct: 151 LNARNFGIPQNRERIYIVAFLKNKFKNISFNFNELKNIEIKSKLGDILEKNVDEKYTISD 210 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 KLW GHQ+RK +K G GFGY LF NS T+T+SARYYKDGSEI Sbjct: 211 KLWAGHQRRKLEHKKKGNGFGYSLFNHNSDYTSTISARYYKDGSEI 256 >gi|308126237|ref|ZP_05908633.2| DNA (cytosine-5-)-methyltransferase [Vibrio parahaemolyticus AQ4037] gi|308107574|gb|EFO45114.1| DNA (cytosine-5-)-methyltransferase [Vibrio parahaemolyticus AQ4037] Length = 426 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 50/108 (46%), Positives = 64/108 (59%), Gaps = 8/108 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-------FKFPTPLGIKPRLGDILEE-HIDDKST 52 ++A DFG PQ RER+Y++ F F+FP P ++GDILE D T Sbjct: 248 LRAADFGAPQNRERIYLVGFDKDYFGDLDFNSIFQFPEPTMKPTKVGDILETSDYVDSFT 307 Query: 53 ISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSE 100 IS+K+W HQKRK +K G GFG+ L + TNT+SARYYKDGSE Sbjct: 308 ISDKIWASHQKRKAGHKNKGNGFGFTLVNSETKYTNTISARYYKDGSE 355 >gi|317497297|ref|ZP_07955620.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium 5_1_63FAA] gi|316895366|gb|EFV17525.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium 5_1_63FAA] Length = 385 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 51/106 (48%), Positives = 70/106 (66%), Gaps = 6/106 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-----VEFKFPT-PLGIKPRLGDILEEHIDDKSTIS 54 + A FG+PQ RER+ I+ F +FK+P + K +GDILE+ + ++ TIS Sbjct: 213 LNAYHFGIPQNRERIIIVGFNKDYLPKKFKDFKYPVGKIDKKVCVGDILEKEVGERFTIS 272 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSE 100 +KLWEGHQ RK +K G GFG+ LF ++S T+T+SARYYKDGSE Sbjct: 273 DKLWEGHQARKRMHKKKGNGFGFCLFNKDSKYTSTISARYYKDGSE 318 >gi|17863973|gb|AAL46998.1|AF448250_2 putative C-5 cytosine-specific DNA methylase [Bacteroides coprosuis DSM 18011] Length = 401 Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 53/110 (48%), Positives = 67/110 (60%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--------FKFPTPLGIKPRLGDILEEHI--DDK 50 + A DFG PQ RER+YI+ F F+FP P K + D+LE+ D Sbjct: 237 LNAKDFGSPQNRERIYIVGFNKNHFTKIDDFNEIFQFPEPSKEKVSVKDVLEKIPANDTI 296 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSE 100 TIS ++W+GHQKRK ++ G GFG+ LF ENS TNT+SARYYKDGSE Sbjct: 297 YTISERIWQGHQKRKLKHQNKGNGFGFSLFNENSEYTNTISARYYKDGSE 346 >gi|15677157|ref|NP_274310.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis MC58] gi|161870164|ref|YP_001599334.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis 053442] gi|218768314|ref|YP_002342826.1| putative modification methylase [Neisseria meningitidis Z2491] gi|7226530|gb|AAF41666.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis MC58] gi|121052322|emb|CAM08652.1| putative modification methylase [Neisseria meningitidis Z2491] gi|161595717|gb|ABX73377.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis 053442] gi|254670478|emb|CBA06174.1| putative DNA modification methylase [Neisseria meningitidis alpha153] gi|308389411|gb|ADO31731.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis alpha710] gi|316984080|gb|EFV63058.1| modification methylase SsoII [Neisseria meningitidis H44/76] gi|319410559|emb|CBY90927.1| putative type II restriction-modification system enzyme Mod [Neisseria meningitidis WUE 2594] gi|325134466|gb|EGC57111.1| modification methylase EcoRII [Neisseria meningitidis M13399] gi|325136204|gb|EGC58812.1| modification methylase EcoRII [Neisseria meningitidis M0579] gi|325140483|gb|EGC63004.1| modification methylase EcoRII [Neisseria meningitidis CU385] gi|325144567|gb|EGC66866.1| modification methylase EcoRII [Neisseria meningitidis M01-240013] gi|325200082|gb|ADY95537.1| modification methylase EcoRII [Neisseria meningitidis H44/76] gi|325201996|gb|ADY97450.1| modification methylase EcoRII [Neisseria meningitidis M01-240149] gi|325205934|gb|ADZ01387.1| modification methylase EcoRII [Neisseria meningitidis M04-240196] gi|325208252|gb|ADZ03704.1| modification methylase EcoRII [Neisseria meningitidis NZ-05/33] Length = 337 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 46/105 (43%), Positives = 63/105 (60%), Gaps = 6/105 (5%) Query: 1 MKACDFGVPQRRERLYIIDFL----NPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 M A + VPQ RER++I+ F N + F FP+P +P+L ILE+ +D+ T+S+ Sbjct: 171 MNAKYY-VPQNRERIFIVGFDRQYFNKEINFNFPSPPESQPKLKQILEDDVDNSFTLSDN 229 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 LW Q + +K G GFG+GL + TLSARYYKDGSEI Sbjct: 230 LWLYLQNYAKKHKAKGNGFGFGLVD-LDGISRTLSARYYKDGSEI 273 >gi|325130344|gb|EGC53110.1| modification methylase EcoRII [Neisseria meningitidis OX99.30304] Length = 337 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 46/105 (43%), Positives = 63/105 (60%), Gaps = 6/105 (5%) Query: 1 MKACDFGVPQRRERLYIIDFL----NPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 M A + VPQ RER++I+ F N + F FP+P +P+L ILE+ +D+ T+S+ Sbjct: 171 MNAKYY-VPQNRERIFIVGFDRQYFNKEINFNFPSPPESQPKLKQILEDDVDNSFTLSDN 229 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 LW Q + +K G GFG+GL + TLSARYYKDGSEI Sbjct: 230 LWLYLQNYAKKHKAKGNGFGFGLVD-LDGISRTLSARYYKDGSEI 273 >gi|304387412|ref|ZP_07369603.1| modification methylase EcoRII [Neisseria meningitidis ATCC 13091] gi|304338505|gb|EFM04624.1| modification methylase EcoRII [Neisseria meningitidis ATCC 13091] Length = 336 Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats. Identities = 46/105 (43%), Positives = 63/105 (60%), Gaps = 6/105 (5%) Query: 1 MKACDFGVPQRRERLYIIDFL----NPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 M A + VPQ RER++I+ F N + F FP+P +P+L ILE+ +D+ T+S+ Sbjct: 171 MNAKYY-VPQNRERIFIVGFDRQYFNKEINFNFPSPPESQPKLKQILEDDVDNSFTLSDN 229 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 LW Q + +K G GFG+GL + TLSARYYKDGSEI Sbjct: 230 LWLYLQNYAKKHKAKGNGFGFGLVD-LDGISRTLSARYYKDGSEI 273 >gi|166368844|ref|YP_001661117.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa NIES-843] gi|166091217|dbj|BAG05925.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa NIES-843] Length = 338 Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats. Identities = 46/94 (48%), Positives = 59/94 (62%), Gaps = 2/94 (2%) Query: 8 VPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQKRKEN 67 VPQ R+R++I+ F PS F FP I P++ DILE +D K T+++ LW+ QK + Sbjct: 158 VPQNRKRIFIVGFEKPS-RFMFPEIPDIHPKIKDILEGEVDSKYTLTDHLWDYLQKYADK 216 Query: 68 NKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 +K G GFGYGL TLSARYYKDGSEI Sbjct: 217 HKEKGNGFGYGLVN-LEGIARTLSARYYKDGSEI 249 >gi|313158099|gb|EFR57504.1| putative DNA (cytosine-5-)-methyltransferase [Alistipes sp. HGB5] Length = 431 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 5/100 (5%) Query: 6 FGVPQRRERLYIIDFLNPSV----EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 + VPQ RER+ I+ F N +FKFP + ++ +ILE +D K T+++KLW Sbjct: 265 YFVPQHRERIMIVGFRNNLFHGVEKFKFPELKDVSHKIRNILEPEVDPKYTLTDKLWVYL 324 Query: 62 QKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 Q + ++ +G GFG+GL TLSARYYKDGSEI Sbjct: 325 QNYAKKHQDSGNGFGFGLVD-LDGIARTLSARYYKDGSEI 363 >gi|66391578|ref|YP_239103.1| hypothetical protein RB43ORF127c [Enterobacteria phage RB43] gi|62288666|gb|AAX78649.1| hypothetical protein RB43ORF127c [Enterobacteria phage RB43] Length = 302 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 48/98 (48%), Positives = 65/98 (66%), Gaps = 2/98 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + DFG+PQRRER++I+ FL+ F FP P R+GDIL E +DD T+S+ W+G Sbjct: 144 LNTKDFGLPQRRERVFIVCFLDDVF-FSFPVPPRTPTRVGDIL-EDVDDSYTLSDNAWKG 201 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 ++RKE NK GKGFGY +S T T++A+YYKDG Sbjct: 202 FRERKERNKANGKGFGYQAVTADSTHTGTITAQYYKDG 239 >gi|304373674|ref|YP_003858419.1| putative DNA-methyltransferase, type II restriction-modification system [Enterobacteria phage RB16] gi|299829630|gb|ADJ55423.1| putative DNA-methyltransferase, type II restriction-modification system [Enterobacteria phage RB16] Length = 302 Score = 113 bits (283), Expect = 7e-24, Method: Composition-based stats. Identities = 48/98 (48%), Positives = 64/98 (65%), Gaps = 2/98 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + DFG+PQRRER++I+ FL+ F FP P R+GDIL E DD T+S+ W+G Sbjct: 144 LNTKDFGLPQRRERVFIVCFLDDVF-FSFPVPPRTPTRVGDIL-EDADDSYTLSDNAWKG 201 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 ++RKE NK GKGFGY +S T T++A+YYKDG Sbjct: 202 FRERKERNKANGKGFGYQAVTADSTHTGTITAQYYKDG 239 >gi|238922589|ref|YP_002936102.1| modification methylase [Eubacterium rectale ATCC 33656] gi|238874261|gb|ACR73968.1| modification methylase [Eubacterium rectale ATCC 33656] Length = 392 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 46/106 (43%), Positives = 63/106 (59%), Gaps = 7/106 (6%) Query: 1 MKACDFGVPQRRERLYIIDFL----NPSVEFKFP-TPLGIKPRLGDILEEHIDDKSTISN 55 + +F VPQ RER+ I+ F +EF F TP+ KP + DILE+ +DDK T+S+ Sbjct: 214 LDGQNF-VPQHRERIIIVGFDMERYGDDIEFDFDITPVNPKPVMRDILEKKVDDKYTLSD 272 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 LW Q ++ AG GFGYG+ + T+SARY+KDGSEI Sbjct: 273 NLWTYLQNYAAKHRAAGNGFGYGIA-PLDGVSRTISARYHKDGSEI 317 >gi|53714966|ref|YP_100958.1| C-5 cytosine-specific DNA-methylase [Bacteroides fragilis YCH46] gi|52217831|dbj|BAD50424.1| C-5 cytosine-specific DNA-methylase [Bacteroides fragilis YCH46] Length = 431 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 5/98 (5%) Query: 8 VPQRRERLYIIDFLNP----SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQK 63 VPQ RER+ I+ F +F FP + +IL+ ID K T+S+KLW Q Sbjct: 270 VPQHRERIMIVGFNQDVFHGKEQFAFPEQKQSTRSIKEILDPDIDGKYTLSDKLWSYLQN 329 Query: 64 RKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 E ++ G GFG+G+ + + TLSARYYKDGSEI Sbjct: 330 YAEKHRAKGNGFGFGMVD-LNGISRTLSARYYKDGSEI 366 >gi|237713924|ref|ZP_04544405.1| C-5 cytosine-specific DNA-methylase [Bacteroides sp. D1] gi|262409168|ref|ZP_06085712.1| C-5 cytosine-specific DNA-methylase [Bacteroides sp. 2_1_22] gi|229446080|gb|EEO51871.1| C-5 cytosine-specific DNA-methylase [Bacteroides sp. D1] gi|262352915|gb|EEZ02011.1| C-5 cytosine-specific DNA-methylase [Bacteroides sp. 2_1_22] Length = 361 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 43/98 (43%), Positives = 56/98 (57%), Gaps = 5/98 (5%) Query: 8 VPQRRERLYIIDFLNPSV----EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQK 63 VPQ RER+ I+ F +F FP + +ILE IDDK T+S+KLW Q Sbjct: 186 VPQHRERIMIVGFNREIFHGEEQFCFPEQKQSTRGIREILESDIDDKYTLSDKLWSYLQN 245 Query: 64 RKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 E ++ G GFG+G+ + + TLSARYYKDGSEI Sbjct: 246 YAEKHRAKGNGFGFGMVD-LNGISRTLSARYYKDGSEI 282 >gi|255262721|ref|ZP_05342063.1| cytosine-specific methyltransferase NlaX [Thalassiobium sp. R2A62] gi|255105056|gb|EET47730.1| cytosine-specific methyltransferase NlaX [Thalassiobium sp. R2A62] Length = 421 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 48/114 (42%), Positives = 65/114 (57%), Gaps = 13/114 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE----FKFP-------TPLGIKPRLGDILEEH--I 47 + A +FGVPQ RER+YI+ F V P + RLGD+LE + + Sbjct: 243 LAAKNFGVPQNRERVYIVGFDRDQVSEAEARDLPREILDGLKERKSETRLGDVLETNASV 302 Query: 48 DDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 D K TIS++L GH++R ++ G GFG+ LF S NT+SARYYKDGSE+ Sbjct: 303 DPKFTISDRLLAGHERRLRAHRAKGNGFGFSLFNAESPYCNTISARYYKDGSEV 356 >gi|294646710|ref|ZP_06724334.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CC 2a] gi|294807186|ref|ZP_06766001.1| DNA (cytosine-5-)-methyltransferase [Bacteroides xylanisolvens SD CC 1b] gi|292637950|gb|EFF56344.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CC 2a] gi|294445609|gb|EFG14261.1| DNA (cytosine-5-)-methyltransferase [Bacteroides xylanisolvens SD CC 1b] Length = 445 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 43/98 (43%), Positives = 56/98 (57%), Gaps = 5/98 (5%) Query: 8 VPQRRERLYIIDFLNPSV----EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQK 63 VPQ RER+ I+ F +F FP + +ILE IDDK T+S+KLW Q Sbjct: 270 VPQHRERIMIVGFNREIFHGEEQFCFPEQKQSTRGIREILESDIDDKYTLSDKLWSYLQN 329 Query: 64 RKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 E ++ G GFG+G+ + + TLSARYYKDGSEI Sbjct: 330 YAEKHRAKGNGFGFGMVD-LNGISRTLSARYYKDGSEI 366 >gi|210631776|ref|ZP_03297018.1| hypothetical protein COLSTE_00903 [Collinsella stercoris DSM 13279] gi|210159896|gb|EEA90867.1| hypothetical protein COLSTE_00903 [Collinsella stercoris DSM 13279] Length = 390 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 5/103 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP--LGIKPRLGDILEEHIDDKSTISNKLW 58 + + + Q RER+YI+ F + V+F + + +ILE +DD+ +S+KLW Sbjct: 223 LDSKGW-TCQHRERIYIVGFRDD-VDFSWDDLDCPQNGQKAAEILETDVDDRYVLSDKLW 280 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + K ++ AG GFGYGL S TT TLSARY+KDGSEI Sbjct: 281 SYLKAYKAKHEAAGNGFGYGLITP-SDTTRTLSARYHKDGSEI 322 >gi|294661528|ref|YP_003579981.1| hypothetical protein KP-KP15_gp115 [Klebsiella phage KP15] gi|292660689|gb|ADE34937.1| hypothetical protein [Klebsiella phage KP15] Length = 308 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 49/98 (50%), Positives = 63/98 (64%), Gaps = 2/98 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 M DFG+PQRRER++I+ F V F FP P R+GDILE D TIS++ W+G Sbjct: 144 MNTKDFGLPQRRERVFIVCFR-DPVFFSFPVPPRTPTRVGDILEPDNDQ-YTISDRAWKG 201 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 ++RKE NK GKGFGY +S T T++A+YYKDG Sbjct: 202 FRERKELNKANGKGFGYQAVTVDSVCTGTITAQYYKDG 239 >gi|238783073|ref|ZP_04627100.1| Modification methylase EcoRII [Yersinia bercovieri ATCC 43970] gi|238716074|gb|EEQ08059.1| Modification methylase EcoRII [Yersinia bercovieri ATCC 43970] Length = 475 Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 10/109 (9%) Query: 2 KACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLG----IKPRLGDILEEHIDDKSTIS 54 +F +PQ RER+ ++ F +F +P G++LE +DDK ++ Sbjct: 276 DGKNF-LPQHRERIVLVGFRKDLNIDKDFTLKDIHKFFPEKRPTFGELLEPVVDDKYILT 334 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFE--NSATTNTLSARYYKDGSEI 101 LW+ + ++ G GFG+GL + + TLSARY+KDGSEI Sbjct: 335 PHLWKYLYNYAKKHQAKGNGFGFGLVDPTNSDSVARTLSARYHKDGSEI 383 >gi|163732386|ref|ZP_02139832.1| hypothetical protein RLO149_03007 [Roseobacter litoralis Och 149] gi|161394684|gb|EDQ19007.1| hypothetical protein RLO149_03007 [Roseobacter litoralis Och 149] Length = 410 Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 45/121 (37%), Positives = 57/121 (47%), Gaps = 23/121 (19%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT---PLGIKPRLGDILEEH----------- 46 + A F VPQ RER+ I+ F F F P + R+ DIL Sbjct: 216 IDAAHF-VPQHRERIVIVGFREDVP-FSFDDVILPPHRERRMRDILHPENGNENPESHFT 273 Query: 47 ------IDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSE 100 + K T+S+KLW+ Q +K G GFG+GL +S TLSARYYKDGSE Sbjct: 274 LGNDAAVSGKYTLSDKLWKYLQDYAAKHKAKGNGFGFGLVDGDS-IARTLSARYYKDGSE 332 Query: 101 I 101 I Sbjct: 333 I 333 >gi|323486195|ref|ZP_08091524.1| cytosine-specific methyltransferase [Clostridium symbiosum WAL-14163] gi|323400521|gb|EGA92890.1| cytosine-specific methyltransferase [Clostridium symbiosum WAL-14163] Length = 382 Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 46/106 (43%), Positives = 63/106 (59%), Gaps = 7/106 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNP----SVEFKF-PTPLGIKPRLGDILEEHIDDKSTISN 55 + +F VPQ RER+ I+ F ++F F TP KP + DIL++ +D+K T+S+ Sbjct: 204 LDGQNF-VPQHRERIIIVGFDRERYGQDIKFDFEITPAIPKPVMKDILDKKVDEKYTLSD 262 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 KLW Q +K AG GFGYG+ + T+SARYYKDGSEI Sbjct: 263 KLWIYLQSYAAKHKAAGNGFGYGIA-PLDGVSRTISARYYKDGSEI 307 >gi|312898460|ref|ZP_07757850.1| DNA (cytosine-5-)-methyltransferase [Megasphaera micronuciformis F0359] gi|310620379|gb|EFQ03949.1| DNA (cytosine-5-)-methyltransferase [Megasphaera micronuciformis F0359] Length = 400 Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats. Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 7/106 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNP----SVEFKF-PTPLGIKPRLGDILEEHIDDKSTISN 55 + ++ VPQ RER+ I+ F + F+F P+ KP + ILE +DDK T+++ Sbjct: 202 LDGQNY-VPQHRERILIVGFDRKRYGRDIGFRFSIAPVNPKPAIKAILETKVDDKYTLTD 260 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 KLW Q ++ AG GFGYG+ N + TLSARYYKDGSEI Sbjct: 261 KLWTYLQNYAAKHRAAGNGFGYGIADPN-GVSRTLSARYYKDGSEI 305 >gi|118576810|ref|YP_876553.1| C-5 cytosine-specific DNA methylase [Cenarchaeum symbiosum A] gi|118195331|gb|ABK78249.1| C-5 cytosine-specific DNA methylase [Cenarchaeum symbiosum A] Length = 325 Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats. Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 2/94 (2%) Query: 8 VPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQKRKEN 67 VPQ RERL+I+ F VEF+FP KPRL DILE + ++ +W ++ KE Sbjct: 159 VPQHRERLFIVGFDRE-VEFEFPKMKNAKPRLRDILEPDPGSEYVLTPGVWAALKRHKEA 217 Query: 68 NKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + G GFGYG+ T TLS RYYKDGSEI Sbjct: 218 CRARGAGFGYGIADP-DGVTRTLSRRYYKDGSEI 250 >gi|237725529|ref|ZP_04556010.1| DNA (cytosine-5-)-methyltransferase [Bacteroides sp. D4] gi|229436216|gb|EEO46293.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei 5_1_36/D4] Length = 374 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 54/123 (43%), Positives = 69/123 (56%), Gaps = 22/123 (17%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFP-------------------TPLGIKPR 38 + A FGVPQ RERL+I+ + V+ FKFP + K Sbjct: 166 LNAKYFGVPQNRERLFIVAWYKDIVKATTFKFPYGIAPDGSTIYEKSKDLGDKVIKTKVS 225 Query: 39 LGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 E+ ID TIS++LW GHQ+RK+ NK GKGFGY LF ENS ++T+SARY+KDG Sbjct: 226 DIFEPEDSIDSYYTISDRLWIGHQERKKRNKANGKGFGYSLFNENSVYSSTISARYWKDG 285 Query: 99 SEI 101 SEI Sbjct: 286 SEI 288 >gi|296103580|ref|YP_003613726.1| DNA cytosine methylase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058039|gb|ADF62777.1| DNA cytosine methylase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 471 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 9/105 (8%) Query: 6 FGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTISNKLW 58 + +PQ RER+ ++ F +F + P + D+LE +D K ++ LW Sbjct: 269 YFLPQHRERIVLVGFRRDLNLKGDFTLRDIPSLYPARRPSVADLLEPAVDAKFILTPVLW 328 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + + ++ G GFG+GL N T TLSARYYKDG+EI Sbjct: 329 KYLYRYAKKHQAKGNGFGFGLVNPNDPHCVTRTLSARYYKDGAEI 373 >gi|260909972|ref|ZP_05916659.1| modification methylase EcoRII [Prevotella sp. oral taxon 472 str. F0295] gi|260635922|gb|EEX53925.1| modification methylase EcoRII [Prevotella sp. oral taxon 472 str. F0295] Length = 370 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 52/121 (42%), Positives = 71/121 (58%), Gaps = 20/121 (16%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFP----------------TPLGIKPRLGD 41 + A FGVPQ RERL+II + V+ FKFP I ++ + Sbjct: 166 LNAKYFGVPQNRERLFIIAWNRELVDVDCFKFPYGIAIDGTSIYEKRKLKGRTIPTKVSE 225 Query: 42 IL-EEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSE 100 I +++ TI++++WEGH+ RKE NK+ GKGFGY LF NS T+T+SARY+KDGSE Sbjct: 226 IFEPDNVTTPFTITDRMWEGHKTRKERNKMNGKGFGYSLFNANSEYTSTISARYWKDGSE 285 Query: 101 I 101 I Sbjct: 286 I 286 >gi|228469904|ref|ZP_04054843.1| cytosine-specific methyltransferase NlaX [Porphyromonas uenonis 60-3] gi|228308539|gb|EEK17327.1| cytosine-specific methyltransferase NlaX [Porphyromonas uenonis 60-3] Length = 395 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 21/122 (17%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFP----------------TPLGIKPRLGD 41 + A FGVPQ RERL+I+ + + F FP I+ ++ D Sbjct: 188 LNAKYFGVPQNRERLFIVAWSKDLISADRFLFPYGIDAEGNTIYDKQMAKRCAIRTKVSD 247 Query: 42 ILEEHIDDK--STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGS 99 I E ++ TIS+++W GHQ RK+ N++ GKGFGY F NS T+T+SARY+KDGS Sbjct: 248 IFEPQSIERDGFTISDRMWLGHQTRKKRNRLNGKGFGYSKFTGNSVYTSTISARYWKDGS 307 Query: 100 EI 101 EI Sbjct: 308 EI 309 >gi|261340425|ref|ZP_05968283.1| DNA (cytosine-5-)-methyltransferase [Enterobacter cancerogenus ATCC 35316] gi|288317516|gb|EFC56454.1| DNA (cytosine-5-)-methyltransferase [Enterobacter cancerogenus ATCC 35316] Length = 477 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS---VEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F + P + D+LE +D K + Sbjct: 271 IDGKHF-LPQHRERIVLVGFRRDLNLMGDFTLRNLPALYPARRPTIADLLEPAVDAKFIL 329 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFG+G+ N T TLSARYYKDG+EI Sbjct: 330 TPVLWKYLYRYAKKHQAKGNGFGFGMVNPNDPHSVTRTLSARYYKDGAEI 379 >gi|161505003|ref|YP_001572115.1| DNA cytosine methylase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866350|gb|ABX22973.1| hypothetical protein SARI_03133 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 474 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLG----IKPRLGDILEEHIDDKSTI 53 + +F +PQ RER+ ++ F F +P G +L+ +D K + Sbjct: 275 IDGKNF-LPQHRERIVLVGFRRDLNIHQGFTLKNIHKFYPEKRPTFGQLLDPAVDSKYIL 333 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 S KLWE + + G GFG+GL N+ TLSARY+KDGSEI Sbjct: 334 SPKLWEYLYNYAKKHAAKGNGFGFGLVDPNNENSVARTLSARYHKDGSEI 383 >gi|157147667|ref|YP_001454986.1| DNA cytosine methylase [Citrobacter koseri ATCC BAA-895] gi|157084872|gb|ABV14550.1| hypothetical protein CKO_03470 [Citrobacter koseri ATCC BAA-895] Length = 474 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLG----IKPRLGDILEEHIDDKSTI 53 + +F +PQ RER+ ++ F F +P G +L+ +D K + Sbjct: 275 IDGKNF-LPQHRERIVLVGFRRDLNIHQGFTLKNIHKFYPEKRPTFGQLLDPAVDSKYIL 333 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 S KLWE + + G GFG+GL N+ TLSARY+KDGSEI Sbjct: 334 SPKLWEYLYNYAKKHAAKGNGFGFGLVDPNNENSVARTLSARYHKDGSEI 383 >gi|85709931|ref|ZP_01040996.1| Type II restriction-modification system methylation subunit [Erythrobacter sp. NAP1] gi|85688641|gb|EAQ28645.1| Type II restriction-modification system methylation subunit [Erythrobacter sp. NAP1] Length = 370 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 10/111 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-------FKFPTPLGIKPRLGDILEEHIDD---K 50 + A +FGVPQ+RER+YI+ F F G RLGD LE + + Sbjct: 184 LAATEFGVPQKRERVYIVGFDRDHFGNIDANDVFAQLERGGHPTRLGDALEPEGANSLAR 243 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 TIS+KLW G +R ++ G GFG+ +F + NT+++RYYKDG EI Sbjct: 244 YTISDKLWSGLIRRMARHEAKGNGFGHKVFNYDDPYCNTITSRYYKDGREI 294 >gi|157368818|ref|YP_001476807.1| DNA cytosine methylase [Serratia proteamaculans 568] gi|157320582|gb|ABV39679.1| DNA-cytosine methyltransferase [Serratia proteamaculans 568] Length = 491 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 16/113 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFK-------FPTPLGIKPRLGDILEEHIDDK 50 + +F +PQ RER+ ++ F +F FP +P G++L E + K Sbjct: 291 IDGKNF-LPQHRERIVLVGFRRDLNIHGDFSLKNLSQFFPK---KRPSFGELLLEDVAPK 346 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFEN--SATTNTLSARYYKDGSEI 101 ++ LW+ + ++ G GFG+GL S+ TLSARY+KDGSEI Sbjct: 347 YILTEHLWKYLYNYAKKHQAKGNGFGFGLVNPKNESSVARTLSARYHKDGSEI 399 >gi|168234623|ref|ZP_02659681.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736513|ref|YP_002117411.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194712015|gb|ACF91236.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291717|gb|EDY31067.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 474 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 16/113 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNP----------SVEFKFPTPLGIKPRLGDILEEHIDDK 50 + +F +PQ RER+ ++ F +++ +P +P G +L+ +D K Sbjct: 275 IDGKNF-LPQHRERIVLVGFRRDLNIHQGFTLKNIDKFYPE---KRPTFGQLLDSVVDSK 330 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 +S KLWE + + G GFG+GL N+ TLSARY+KDGSEI Sbjct: 331 YILSPKLWEYLYNYAKKHAAKGNGFGFGLVDPNNENSVARTLSARYHKDGSEI 383 >gi|161617789|ref|YP_001591754.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161367153|gb|ABX70921.1| hypothetical protein SPAB_05653 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 474 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 16/113 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNP----------SVEFKFPTPLGIKPRLGDILEEHIDDK 50 + +F +PQ RER+ ++ F +++ +P +P G +L+ +D K Sbjct: 275 IDGKNF-LPQHRERIVLVGFRRDLNIHQGFTLKNIDKFYPE---KRPTFGQLLDSVVDSK 330 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 +S KLWE + + G GFG+GL N+ TLSARY+KDGSEI Sbjct: 331 YILSPKLWEYLYNYAKKHAAKGNGFGFGLVDPNNENSVARTLSARYHKDGSEI 383 >gi|239621327|ref|ZP_04664358.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515788|gb|EEQ55655.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 343 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 41/103 (39%), Positives = 54/103 (52%), Gaps = 3/103 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPL-GIKPRLGDILEEHIDDKSTISNKLW 58 + A F VPQ RER YI+ F + F P+ + + DK +S+KLW Sbjct: 179 IDAAGF-VPQHRERTYIVGFREENGFTFDDVKPIAHGNVGSILLPASQVPDKYVLSDKLW 237 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 Q K+ ++ AG GFGYG+ + T TLSARY KDGSEI Sbjct: 238 TYLQNYKKKHEAAGNGFGYGMVDAATDHTRTLSARYGKDGSEI 280 >gi|133756232|ref|YP_001096382.1| DNA cytosine methylase [Escherichia coli] gi|110084067|gb|ABG49221.1| hypothetical protein [Escherichia coli] Length = 566 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F +P G++LE +D K + Sbjct: 364 IDGKHF-LPQHRERIVLVGFRRDLNIHQGFTLRDISRFYPEQRPSFGELLEPVVDSKYIL 422 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + KLWE + + G GFG+GL + TLSARY+KDGSEI Sbjct: 423 TPKLWEYLYNYAKKHAAKGNGFGFGLVNPENKESIARTLSARYHKDGSEI 472 >gi|23466029|ref|NP_696632.1| modification methylase very EcoRII (cytosine-specificmethyltransferase [Bifidobacterium longum NCC2705] gi|23326750|gb|AAN25268.1| modification methylase very similar to EcoRII (cytosine-specificmethyltransferase [Bifidobacterium longum NCC2705] Length = 323 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 41/103 (39%), Positives = 54/103 (52%), Gaps = 3/103 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPL-GIKPRLGDILEEHIDDKSTISNKLW 58 + A F VPQ RER YI+ F + F P+ + + DK +S+KLW Sbjct: 159 IDAAGF-VPQHRERTYIVGFREENGFTFDDVKPIAHGNVGSILLPASQVPDKYVLSDKLW 217 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 Q K+ ++ AG GFGYG+ + T TLSARY KDGSEI Sbjct: 218 TYLQNYKKKHEAAGNGFGYGMVDAATDHTRTLSARYGKDGSEI 260 >gi|189439219|ref|YP_001954300.1| site-specific DNA methylase [Bifidobacterium longum DJO10A] gi|189427654|gb|ACD97802.1| Site-specific DNA methylase [Bifidobacterium longum DJO10A] Length = 323 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 41/103 (39%), Positives = 54/103 (52%), Gaps = 3/103 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPL-GIKPRLGDILEEHIDDKSTISNKLW 58 + A F VPQ RER YI+ F + F P+ + + DK +S+KLW Sbjct: 159 IDAAGF-VPQHRERTYIVGFREENGFTFDDVKPIAHGNVGSILLPASQVPDKYVLSDKLW 217 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 Q K+ ++ AG GFGYG+ + T TLSARY KDGSEI Sbjct: 218 TYLQNYKKKHEAAGNGFGYGMVDAATDHTRTLSARYGKDGSEI 260 >gi|215487159|ref|YP_002329590.1| DNA cytosine methylase [Escherichia coli O127:H6 str. E2348/69] gi|312967158|ref|ZP_07781376.1| DNA-cytosine methyltransferase [Escherichia coli 2362-75] gi|215265231|emb|CAS09622.1| DNA cytosine methylase [Escherichia coli O127:H6 str. E2348/69] gi|312288622|gb|EFR16524.1| DNA-cytosine methyltransferase [Escherichia coli 2362-75] Length = 472 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISKCFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|46191283|ref|ZP_00120453.2| COG0270: Site-specific DNA methylase [Bifidobacterium longum DJO10A] Length = 315 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 41/103 (39%), Positives = 54/103 (52%), Gaps = 3/103 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPL-GIKPRLGDILEEHIDDKSTISNKLW 58 + A F VPQ RER YI+ F + F P+ + + DK +S+KLW Sbjct: 151 IDAAGF-VPQHRERTYIVGFREENGFTFDDVKPIAHGNVGSILLPASQVPDKYVLSDKLW 209 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 Q K+ ++ AG GFGYG+ + T TLSARY KDGSEI Sbjct: 210 TYLQNYKKKHEAAGNGFGYGMVDAATDHTRTLSARYGKDGSEI 252 >gi|323186716|gb|EFZ72038.1| DNA-cytosine methyltransferase [Escherichia coli RN587/1] Length = 472 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISKCFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|295098276|emb|CBK87366.1| DNA-methyltransferase (dcm) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 477 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F + P + D+LE +D K + Sbjct: 271 IDGKHF-LPQHRERIVLVGFRRDLNLKGDFTLRDLPSLYPARRPTVADLLEPAVDAKFIL 329 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFE--NSATTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFG+G+ + T TLSARYYKDG+EI Sbjct: 330 TPVLWKYLYRYAKKHQAKGNGFGFGMVNPLNPDSVTRTLSARYYKDGAEI 379 >gi|94501925|ref|ZP_01308434.1| DNA-cytosine methyltransferase [Oceanobacter sp. RED65] gi|94425919|gb|EAT10918.1| DNA-cytosine methyltransferase [Oceanobacter sp. RED65] Length = 287 Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats. Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 10/109 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EF---KFPTPLGIKPRLGDILEEHIDDKSTIS 54 + +F +PQ RER+ ++ F F P P P L +LE+ +D+K ++ Sbjct: 88 IDGANF-LPQHRERIVLVGFRKDLNLTNRFTLTNLPKPRE-VPSLSSLLEKSVDEKYVLT 145 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 +LWE + + ++ G GFGYGL ++ TLSARY+KDGSEI Sbjct: 146 PRLWEYLYEYAKKHQAKGNGFGYGLVDPKNSSAVCRTLSARYHKDGSEI 194 >gi|260855934|ref|YP_003229825.1| DNA cytosine methylase [Escherichia coli O26:H11 str. 11368] gi|300822269|ref|ZP_07102410.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 119-7] gi|257754583|dbj|BAI26085.1| DNA cytosine methylase [Escherichia coli O26:H11 str. 11368] gi|300525152|gb|EFK46221.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 119-7] gi|309702249|emb|CBJ01566.1| DNA-cytosine methyltransferase [Escherichia coli ETEC H10407] gi|323937230|gb|EGB33510.1| DNA-cytosine methyltransferase [Escherichia coli E1520] Length = 472 Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISKCFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|323977859|gb|EGB72945.1| DNA-cytosine methyltransferase [Escherichia coli TW10509] Length = 472 Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLREISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|323968376|gb|EGB63783.1| DNA-cytosine methyltransferase [Escherichia coli M863] gi|327253092|gb|EGE64746.1| DNA-cytosine methyltransferase [Escherichia coli STEC_7v] Length = 472 Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLREISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|323962004|gb|EGB57603.1| DNA-cytosine methyltransferase [Escherichia coli H489] Length = 472 Score = 107 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISKCFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|301018179|ref|ZP_07182696.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 69-1] gi|300399832|gb|EFJ83370.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 69-1] Length = 472 Score = 107 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|300994233|ref|ZP_07180788.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1] gi|300304943|gb|EFJ59463.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1] Length = 477 Score = 107 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 271 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 329 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 330 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 379 >gi|218695565|ref|YP_002403232.1| DNA cytosine methylase [Escherichia coli 55989] gi|256022383|ref|ZP_05436248.1| DNA cytosine methylase [Escherichia sp. 4_1_40B] gi|218352297|emb|CAU98056.1| DNA cytosine methylase [Escherichia coli 55989] gi|323972739|gb|EGB67939.1| DNA-cytosine methyltransferase [Escherichia coli TA007] gi|332343686|gb|AEE57020.1| DNA-cytosine methyltransferase [Escherichia coli UMNK88] Length = 472 Score = 107 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F G P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISGCFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|218705454|ref|YP_002412973.1| DNA cytosine methylase [Escherichia coli UMN026] gi|293405443|ref|ZP_06649435.1| DNA cytosine methylase [Escherichia coli FVEC1412] gi|298381087|ref|ZP_06990686.1| DNA cytosine methylase [Escherichia coli FVEC1302] gi|218432551|emb|CAR13444.1| DNA cytosine methylase [Escherichia coli UMN026] gi|291427651|gb|EFF00678.1| DNA cytosine methylase [Escherichia coli FVEC1412] gi|298278529|gb|EFI20043.1| DNA cytosine methylase [Escherichia coli FVEC1302] Length = 472 Score = 107 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISKCFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|238787820|ref|ZP_04631617.1| Modification methylase EcoRII [Yersinia frederiksenii ATCC 33641] gi|238724163|gb|EEQ15806.1| Modification methylase EcoRII [Yersinia frederiksenii ATCC 33641] Length = 475 Score = 107 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + +F +PQ RER+ ++ F +F +P G++LE + DK + Sbjct: 275 IDGKNF-LPQHRERIVLVGFRKDLNIDKDFTLKDINKFFPEKRPEFGELLESVVADKYIL 333 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + ++ G GFG+GL ++ TLSARY+KDGSEI Sbjct: 334 TPHLWKYLYNYAKKHQAKGNGFGFGLVDPTNSESVARTLSARYHKDGSEI 383 >gi|309795932|ref|ZP_07690345.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 145-7] gi|308120382|gb|EFO57644.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 145-7] Length = 472 Score = 107 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|301029418|ref|ZP_07192512.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 196-1] gi|299877722|gb|EFI85933.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 196-1] Length = 476 Score = 107 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F G P L +L+ ++ K + Sbjct: 270 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISGCFPAQRVTLAQLLDPMVEAKYIL 328 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 329 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 378 >gi|291283137|ref|YP_003499955.1| DNA-cytosine methyltransferase [Escherichia coli O55:H7 str. CB9615] gi|209766674|gb|ACI81649.1| DNA cytosine methylase [Escherichia coli] gi|290763010|gb|ADD56971.1| DNA-cytosine methyltransferase [Escherichia coli O55:H7 str. CB9615] Length = 472 Score = 107 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|167035739|ref|YP_001670970.1| DNA cytosine methylase [Pseudomonas putida GB-1] gi|166862227|gb|ABZ00635.1| DNA-cytosine methyltransferase [Pseudomonas putida GB-1] Length = 447 Score = 107 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 42/103 (40%), Positives = 55/103 (53%), Gaps = 8/103 (7%) Query: 6 FGVPQRRERLYIIDFLNPSV---EFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLW 58 + PQ RER+ ++ F F +P LGDIL+E +DDK ++ KLW Sbjct: 259 YFTPQHRERIVLVGFRKDLGVHSGFTLKDIAELFPKKRPALGDILDEKVDDKYILTPKLW 318 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + +K G GFG+GL S+ T TLSARYYKDGSEI Sbjct: 319 QYLFNYAIKHKAKGNGFGFGLV-GKSSVTRTLSARYYKDGSEI 360 >gi|330911766|gb|EGH40276.1| DNA-cytosine methyltransferase [Escherichia coli AA86] Length = 472 Score = 107 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|74312499|ref|YP_310918.1| DNA cytosine methylase [Shigella sonnei Ss046] gi|73855976|gb|AAZ88683.1| DNA cytosine methylase [Shigella sonnei Ss046] gi|323168918|gb|EFZ54598.1| DNA-cytosine methyltransferase [Shigella sonnei 53G] Length = 472 Score = 107 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|194430436|ref|ZP_03062919.1| DNA-cytosine methyltransferase [Escherichia coli B171] gi|194411515|gb|EDX27854.1| DNA-cytosine methyltransferase [Escherichia coli B171] Length = 472 Score = 107 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQCVTRTLSARYYKDGAEI 374 >gi|300975476|ref|ZP_07173024.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 45-1] gi|300410366|gb|EFJ93904.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 45-1] Length = 472 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|297622183|ref|YP_003675732.1| EcoRII cytosine-methyltransferase [Klebsiella oxytoca KOX105] gi|296492002|gb|ADH29504.1| EcoRII cytosine-methyltransferase [Klebsiella oxytoca KOX105] Length = 491 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F +P G++LE +D K + Sbjct: 289 IDGKHF-LPQHRERIVLVGFRRDLNIHQGFTLRDISRFYPEQRPSFGELLEPVVDSKYIL 347 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + KLWE + + G GFG+GL + TLSARY+KDGSEI Sbjct: 348 TPKLWEYLYNYAKKHAAKGNGFGFGLVNPENKESIARTLSARYHKDGSEI 397 >gi|24113334|ref|NP_707844.1| DNA cytosine methylase [Shigella flexneri 2a str. 301] gi|30063396|ref|NP_837567.1| DNA cytosine methylase [Shigella flexneri 2a str. 2457T] gi|110805927|ref|YP_689447.1| DNA cytosine methylase [Shigella flexneri 5 str. 8401] gi|24052347|gb|AAN43551.1| DNA cytosine methylase [Shigella flexneri 2a str. 301] gi|30041648|gb|AAP17376.1| DNA cytosine methylase [Shigella flexneri 2a str. 2457T] gi|110615475|gb|ABF04142.1| DNA cytosine methylase [Shigella flexneri 5 str. 8401] gi|281601397|gb|ADA74381.1| Cytosine-specific methyltransferase [Shigella flexneri 2002017] gi|313650184|gb|EFS14597.1| DNA-cytosine methyltransferase [Shigella flexneri 2a str. 2457T] gi|332756118|gb|EGJ86471.1| DNA-cytosine methyltransferase [Shigella flexneri 4343-70] gi|332757312|gb|EGJ87649.1| DNA-cytosine methyltransferase [Shigella flexneri 2747-71] gi|332757528|gb|EGJ87863.1| DNA-cytosine methyltransferase [Shigella flexneri K-671] gi|332766700|gb|EGJ96904.1| cytosine-specific methyltransferase [Shigella flexneri 2930-71] gi|333003060|gb|EGK22614.1| DNA-cytosine methyltransferase [Shigella flexneri VA-6] gi|333003307|gb|EGK22853.1| DNA-cytosine methyltransferase [Shigella flexneri K-218] gi|333004068|gb|EGK23602.1| DNA-cytosine methyltransferase [Shigella flexneri K-272] gi|333017687|gb|EGK36999.1| DNA-cytosine methyltransferase [Shigella flexneri K-304] gi|333017841|gb|EGK37148.1| DNA-cytosine methyltransferase [Shigella flexneri K-227] Length = 472 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|323191533|gb|EFZ76794.1| modification methylase EcoRII [Escherichia coli RN587/1] Length = 474 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F +P G++L+ ++DDK + Sbjct: 275 IDGKHF-LPQHRERIVLVGFRRDLNIHKDFTLRNINRFYPQNRPTFGELLDHNVDDKYIL 333 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFEN--SATTNTLSARYYKDGSEI 101 + +LWE + + G GFG+GL + TLSARY+KDGSEI Sbjct: 334 TPRLWEYLYNYAKKHAAKGNGFGFGLVDPKNPDSIARTLSARYHKDGSEI 383 >gi|37524351|ref|NP_927695.1| DNA cytosine methylase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36783775|emb|CAE12633.1| DNA-cytosine methyltransferase [Photorhabdus luminescens subsp. laumondii TTO1] Length = 478 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 9/105 (8%) Query: 6 FGVPQRRERLYIIDFLNPSV---EFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLW 58 + +PQ RER+ ++ F F +P L D+LE +D K ++ LW Sbjct: 279 YFLPQHRERIVLVGFRKDLNIHQGFTLRDISRYFPKERPTLADLLEPEVDSKYILTPNLW 338 Query: 59 EGHQKRKENNKIAGKGFGYGLFFEN--SATTNTLSARYYKDGSEI 101 + ++ G GFG+GL N + T TLSARY+KDGSEI Sbjct: 339 KYLYNYARKHQAKGNGFGFGLIDPNNKDSVTRTLSARYHKDGSEI 383 >gi|320641809|gb|EFX11197.1| DNA cytosine methylase [Escherichia coli O157:H7 str. G5101] Length = 472 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|315296465|gb|EFU55762.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 16-3] Length = 476 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 270 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 328 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 329 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 378 >gi|300931174|ref|ZP_07146520.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 187-1] gi|300461007|gb|EFK24500.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 187-1] Length = 477 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 271 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 329 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 330 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 379 >gi|91211180|ref|YP_541166.1| DNA cytosine methylase [Escherichia coli UTI89] gi|117624099|ref|YP_853012.1| DNA cytosine methylase [Escherichia coli APEC O1] gi|218558817|ref|YP_002391730.1| DNA cytosine methylase [Escherichia coli S88] gi|91072754|gb|ABE07635.1| DNA cytosine methylase [Escherichia coli UTI89] gi|115513223|gb|ABJ01298.1| DNA cytosine methylase [Escherichia coli APEC O1] gi|218365586|emb|CAR03313.1| DNA cytosine methylase [Escherichia coli S88] gi|294492656|gb|ADE91412.1| DNA-cytosine methyltransferase [Escherichia coli IHE3034] gi|307626564|gb|ADN70868.1| DNA cytosine methylase [Escherichia coli UM146] gi|323952452|gb|EGB48325.1| DNA-cytosine methyltransferase [Escherichia coli H252] Length = 472 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|15802395|ref|NP_288421.1| DNA cytosine methylase [Escherichia coli O157:H7 EDL933] gi|15831953|ref|NP_310726.1| DNA cytosine methylase [Escherichia coli O157:H7 str. Sakai] gi|16129907|ref|NP_416470.1| DNA cytosine methyltransferase [Escherichia coli str. K-12 substr. MG1655] gi|89108792|ref|AP_002572.1| DNA cytosine methylase [Escherichia coli str. K-12 substr. W3110] gi|168752207|ref|ZP_02777229.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4113] gi|168758275|ref|ZP_02783282.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4401] gi|168771615|ref|ZP_02796622.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4486] gi|168777717|ref|ZP_02802724.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4196] gi|168783359|ref|ZP_02808366.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4076] gi|168789321|ref|ZP_02814328.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC869] gi|168801737|ref|ZP_02826744.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC508] gi|170081604|ref|YP_001730924.1| DNA cytosine methylase [Escherichia coli str. K-12 substr. DH10B] gi|195939267|ref|ZP_03084649.1| DNA cytosine methylase [Escherichia coli O157:H7 str. EC4024] gi|208810340|ref|ZP_03252216.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4206] gi|208816602|ref|ZP_03257722.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4045] gi|208821263|ref|ZP_03261583.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4042] gi|209400193|ref|YP_002271076.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4115] gi|209919382|ref|YP_002293466.1| DNA cytosine methylase [Escherichia coli SE11] gi|217328629|ref|ZP_03444710.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. TW14588] gi|218689956|ref|YP_002398168.1| DNA cytosine methylase [Escherichia coli ED1a] gi|238901165|ref|YP_002926961.1| DNA cytosine methylase [Escherichia coli BW2952] gi|253773091|ref|YP_003035922.1| DNA cytosine methylase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254793611|ref|YP_003078448.1| DNA cytosine methylase [Escherichia coli O157:H7 str. TW14359] gi|256017846|ref|ZP_05431711.1| DNA cytosine methylase [Shigella sp. D9] gi|261227545|ref|ZP_05941826.1| DNA cytosine methylase [Escherichia coli O157:H7 str. FRIK2000] gi|261254631|ref|ZP_05947164.1| DNA cytosine methylase [Escherichia coli O157:H7 str. FRIK966] gi|293415271|ref|ZP_06657914.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185] gi|300818618|ref|ZP_07098826.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 107-1] gi|300920181|ref|ZP_07136630.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 115-1] gi|301327749|ref|ZP_07220953.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1] gi|301644580|ref|ZP_07244570.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 146-1] gi|307312454|ref|ZP_07592088.1| DNA-cytosine methyltransferase [Escherichia coli W] gi|312973821|ref|ZP_07787993.1| DNA-cytosine methyltransferase [Escherichia coli 1827-70] gi|332278872|ref|ZP_08391285.1| DNA cytosine methylase [Shigella sp. D9] gi|83305674|sp|P0AEE0|DCM_ECO57 RecName: Full=DNA-cytosine methyltransferase gi|83305675|sp|P0AED9|DCM_ECOLI RecName: Full=DNA-cytosine methyltransferase; AltName: Full=M.EcoDcm gi|12516070|gb|AAG56975.1|AE005418_3 DNA cytosine methylase [Escherichia coli O157:H7 str. EDL933] gi|41239|emb|CAA31705.1| unnamed protein product [Escherichia coli K-12] gi|145719|gb|AAA03723.1| DNA cytosine methylase [Escherichia coli] gi|1736630|dbj|BAA15788.1| DNA cytosine methylase [Escherichia coli str. K12 substr. W3110] gi|1788271|gb|AAC75027.1| DNA cytosine methyltransferase [Escherichia coli str. K-12 substr. MG1655] gi|13362167|dbj|BAB36122.1| DNA cytosine methylase [Escherichia coli O157:H7 str. Sakai] gi|169889439|gb|ACB03146.1| DNA cytosine methylase [Escherichia coli str. K-12 substr. DH10B] gi|187767102|gb|EDU30946.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4196] gi|188013903|gb|EDU52025.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4113] gi|188999305|gb|EDU68291.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4076] gi|189354901|gb|EDU73320.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4401] gi|189359668|gb|EDU78087.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4486] gi|189371047|gb|EDU89463.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC869] gi|189376137|gb|EDU94553.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC508] gi|208724856|gb|EDZ74563.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4206] gi|208730945|gb|EDZ79634.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4045] gi|208741386|gb|EDZ89068.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4042] gi|209161593|gb|ACI39026.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4115] gi|209766668|gb|ACI81646.1| DNA cytosine methylase [Escherichia coli] gi|209766670|gb|ACI81647.1| DNA cytosine methylase [Escherichia coli] gi|209766672|gb|ACI81648.1| DNA cytosine methylase [Escherichia coli] gi|209766676|gb|ACI81650.1| DNA cytosine methylase [Escherichia coli] gi|209912641|dbj|BAG77715.1| DNA cytosine methylase [Escherichia coli SE11] gi|217317976|gb|EEC26403.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. TW14588] gi|218427520|emb|CAR08415.2| DNA cytosine methylase [Escherichia coli ED1a] gi|238860813|gb|ACR62811.1| DNA cytosine methylase [Escherichia coli BW2952] gi|253324135|gb|ACT28737.1| DNA-cytosine methyltransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254593011|gb|ACT72372.1| DNA cytosine methylase [Escherichia coli O157:H7 str. TW14359] gi|260448927|gb|ACX39349.1| DNA-cytosine methyltransferase [Escherichia coli DH1] gi|291432919|gb|EFF05898.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185] gi|300412803|gb|EFJ96113.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 115-1] gi|300528790|gb|EFK49852.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 107-1] gi|300845711|gb|EFK73471.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1] gi|301077088|gb|EFK91894.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 146-1] gi|306907625|gb|EFN38128.1| DNA-cytosine methyltransferase [Escherichia coli W] gi|310332416|gb|EFP99651.1| DNA-cytosine methyltransferase [Escherichia coli 1827-70] gi|315061260|gb|ADT75587.1| DNA cytosine methylase [Escherichia coli W] gi|315136597|dbj|BAJ43756.1| DNA cytosine methylase [Escherichia coli DH1] gi|320191934|gb|EFW66581.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC1212] gi|320198651|gb|EFW73251.1| DNA-cytosine methyltransferase [Escherichia coli EC4100B] gi|320647167|gb|EFX16000.1| DNA cytosine methylase [Escherichia coli O157:H- str. 493-89] gi|320652452|gb|EFX20750.1| DNA cytosine methylase [Escherichia coli O157:H- str. H 2687] gi|320658054|gb|EFX25816.1| DNA cytosine methylase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658625|gb|EFX26319.1| DNA cytosine methylase [Escherichia coli O55:H7 str. USDA 5905] gi|320668523|gb|EFX35350.1| DNA cytosine methylase [Escherichia coli O157:H7 str. LSU-61] gi|323174657|gb|EFZ60277.1| DNA-cytosine methyltransferase [Escherichia coli LT-68] gi|323183944|gb|EFZ69331.1| DNA-cytosine methyltransferase [Escherichia coli 1357] gi|323378163|gb|ADX50431.1| DNA-cytosine methyltransferase [Escherichia coli KO11] gi|323948336|gb|EGB44323.1| DNA-cytosine methyltransferase [Escherichia coli H120] gi|326342371|gb|EGD66152.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. 1044] gi|326344875|gb|EGD68622.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. 1125] gi|332101224|gb|EGJ04570.1| DNA cytosine methylase [Shigella sp. D9] Length = 472 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|110642066|ref|YP_669796.1| DNA cytosine methylase [Escherichia coli 536] gi|191173268|ref|ZP_03034798.1| DNA-cytosine methyltransferase [Escherichia coli F11] gi|110343658|gb|ABG69895.1| DNA-cytosine methyltransferase [Escherichia coli 536] gi|190906385|gb|EDV65994.1| DNA-cytosine methyltransferase [Escherichia coli F11] gi|222033699|emb|CAP76440.1| DNA-cytosine methyltransferase [Escherichia coli LF82] gi|312946553|gb|ADR27380.1| DNA cytosine methylase [Escherichia coli O83:H1 str. NRG 857C] gi|324013473|gb|EGB82692.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 60-1] Length = 472 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|56751653|ref|YP_172354.1| hypothetical protein syc1644_d [Synechococcus elongatus PCC 6301] gi|81301269|ref|YP_401477.1| DNA-cytosine methyltransferase [Synechococcus elongatus PCC 7942] gi|56686612|dbj|BAD79834.1| hypothetical protein [Synechococcus elongatus PCC 6301] gi|81170150|gb|ABB58490.1| DNA-cytosine methyltransferase [Synechococcus elongatus PCC 7942] Length = 424 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 23/121 (19%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFP---TPLGIKPRLGDILEEH----------- 46 + A F VPQ RER+YI+ F V F + P + DIL + Sbjct: 228 IDAKGF-VPQHRERIYIVGFREE-VGFNWDSFSQPPTDTKCMADILHPNDGSEEVEEPYT 285 Query: 47 ------IDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSE 100 ++DK T+S+KLW Q ++ AG GFG+GL ++S TLSARYYKDGSE Sbjct: 286 VGIEAKVNDKYTLSDKLWNYLQNYANKHRAAGNGFGFGLVNKDS-IARTLSARYYKDGSE 344 Query: 101 I 101 I Sbjct: 345 I 345 >gi|238919389|ref|YP_002932904.1| DNA cytosine methylase [Edwardsiella ictaluri 93-146] gi|238868958|gb|ACR68669.1| modification methylase [Edwardsiella ictaluri 93-146] Length = 471 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F KP G++LE +D K + Sbjct: 273 IDGKHF-LPQHRERIVLVGFRRDLNIHHDFTLQKIQQFYPEKKPTFGELLEPAVDSKYIL 331 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 S KLWE + + G GFG+GL + TLSARY+KDGSEI Sbjct: 332 SPKLWEYLYNYAKKHAEKGNGFGFGLVDPKNKESIARTLSARYHKDGSEI 381 >gi|296538000|gb|ADH30019.1| EcoRII cytosine methylase [Escherichia coli O25b:H4 str. EC958] Length = 477 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F +P G++LE +D K + Sbjct: 275 IDGKHF-LPQHRERIVLVGFRRDLNIHQGFTLRDISRFYPEQRPSFGELLEPVVDSKYIL 333 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + KLWE + + G GFG+GL + TLSARY+KDGSEI Sbjct: 334 TPKLWEYLYNYAKKHAAKGNGFGFGLVNPENKESIARTLSARYHKDGSEI 383 >gi|26248232|ref|NP_754272.1| DNA cytosine methylase [Escherichia coli CFT073] gi|227885611|ref|ZP_04003416.1| DNA cytosine methylase [Escherichia coli 83972] gi|237705920|ref|ZP_04536401.1| DNA-cytosine methyltransferase [Escherichia sp. 3_2_53FAA] gi|331647554|ref|ZP_08348646.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M605] gi|26108636|gb|AAN80839.1|AE016762_92 DNA-cytosine methyltransferase [Escherichia coli CFT073] gi|226900677|gb|EEH86936.1| DNA-cytosine methyltransferase [Escherichia sp. 3_2_53FAA] gi|227837184|gb|EEJ47650.1| DNA cytosine methylase [Escherichia coli 83972] gi|281179022|dbj|BAI55352.1| DNA cytosine methylase [Escherichia coli SE15] gi|307553973|gb|ADN46748.1| DNA cytosine methylase [Escherichia coli ABU 83972] gi|320194327|gb|EFW68958.1| DNA-cytosine methyltransferase [Escherichia coli WV_060327] gi|323956356|gb|EGB52099.1| DNA-cytosine methyltransferase [Escherichia coli H263] gi|324005878|gb|EGB75097.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 57-2] gi|331043278|gb|EGI15416.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M605] Length = 472 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|191169235|ref|ZP_03030988.1| DNA-cytosine methyltransferase [Escherichia coli B7A] gi|190900713|gb|EDV60509.1| DNA-cytosine methyltransferase [Escherichia coli B7A] Length = 472 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|315286667|gb|EFU46100.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 110-3] Length = 475 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 269 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 327 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 328 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 377 >gi|300923873|ref|ZP_07139889.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 182-1] gi|300419870|gb|EFK03181.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 182-1] Length = 477 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 271 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 329 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 330 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 379 >gi|170681403|ref|YP_001743285.1| DNA cytosine methylase [Escherichia coli SMS-3-5] gi|170519121|gb|ACB17299.1| DNA-cytosine methyltransferase [Escherichia coli SMS-3-5] gi|324119009|gb|EGC12898.1| DNA-cytosine methyltransferase [Escherichia coli E1167] Length = 472 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|113706802|ref|YP_724464.1| DNA cytosine methylase [Escherichia coli] gi|190576899|ref|YP_001966231.1| M.EcoRII DNA methylase [Klebsiella pneumoniae] gi|194433606|ref|ZP_03065883.1| modification methylase EcoRII [Shigella dysenteriae 1012] gi|209901141|ref|YP_002286923.1| DNA cytosine methylase [Klebsiella pneumoniae] gi|209901236|ref|YP_002287017.1| DNA cytosine methylase [Klebsiella pneumoniae] gi|215528089|ref|YP_002332862.1| EcoRII cytosine methylase [Klebsiella pneumoniae] gi|302141639|ref|YP_003813098.1| EcoRII methylase [Klebsiella pneumoniae] gi|127448|sp|P05101|MTE2_ECOLX RecName: Full=Modification methylase EcoRII; Short=M.EcoRII; AltName: Full=Cytosine-specific methyltransferase EcoRII gi|41317|emb|CAA28725.1| unnamed protein product [Escherichia coli HB101] gi|109390538|gb|ABG33840.1| EcoRII modification enzyme [Escherichia coli] gi|110264483|gb|ABG56846.1| M.EcoRII DNA methylase [Klebsiella pneumoniae] gi|165928612|gb|ABY74380.1| EcoRII cytosine methylase [Klebsiella pneumoniae] gi|194418198|gb|EDX34290.1| modification methylase EcoRII [Shigella dysenteriae 1012] gi|197092209|gb|ACH42172.1| EcoRII cytosine methylase [Klebsiella pneumoniae] gi|209574187|gb|ACI63075.1| modification methylase [Klebsiella pneumoniae] gi|209574298|gb|ACI63184.1| modification methylase [Klebsiella pneumoniae] gi|296033904|gb|ADG84867.1| EcoRII methylase [Klebsiella pneumoniae] Length = 477 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F +P G++LE +D K + Sbjct: 275 IDGKHF-LPQHRERIVLVGFRRDLNIHQGFTLRDISRFYPEQRPSFGELLEPVVDSKYIL 333 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + KLWE + + G GFG+GL + TLSARY+KDGSEI Sbjct: 334 TPKLWEYLYNYAKKHAAKGNGFGFGLVNPENKESIARTLSARYHKDGSEI 383 >gi|193071315|ref|ZP_03052233.1| DNA-cytosine methyltransferase [Escherichia coli E110019] gi|331683510|ref|ZP_08384111.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H299] gi|192955357|gb|EDV85842.1| DNA-cytosine methyltransferase [Escherichia coli E110019] gi|331079725|gb|EGI50922.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H299] Length = 472 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F G P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISGCFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|301050676|ref|ZP_07197538.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 185-1] gi|300297633|gb|EFJ54018.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 185-1] Length = 477 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 271 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 329 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 330 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 379 >gi|218699478|ref|YP_002407107.1| DNA cytosine methylase [Escherichia coli IAI39] gi|218369464|emb|CAR17229.1| DNA cytosine methylase [Escherichia coli IAI39] Length = 472 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|331671799|ref|ZP_08372595.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Escherichia coli TA280] gi|331070788|gb|EGI42147.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Escherichia coli TA280] Length = 474 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F +P G++L+ +DDK + Sbjct: 275 IDGKHF-LPQHRERIVLVGFRRDLNIHKDFTLRNINRFYPQNRPTFGELLDHDVDDKYIL 333 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFEN--SATTNTLSARYYKDGSEI 101 + +LWE + + G GFG+GL + TLSARY+KDGSEI Sbjct: 334 TPRLWEYLYNYAKKHAAKGNGFGFGLVDPKNPDSIARTLSARYHKDGSEI 383 >gi|300940416|ref|ZP_07155001.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 21-1] gi|300454810|gb|EFK18303.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 21-1] Length = 476 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 270 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 328 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 329 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 378 >gi|160431610|ref|YP_001551777.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Dublin] gi|298206539|ref|YP_003717476.1| EcoRII modification enzyme [Escherichia coli] gi|159885479|dbj|BAF93082.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Dublin] gi|296537944|gb|ADH29964.1| EcoRII modification enzyme [Escherichia coli O25b:H4 str. EC958] Length = 477 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F +P G++LE +D K + Sbjct: 275 IDGKHF-LPQHRERIVLVGFRRDLNIHQGFTLRDISRFYPEQRPSFGELLEPVVDSKYIL 333 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + KLWE + + G GFG+GL + TLSARY+KDGSEI Sbjct: 334 TPKLWEYLYNYAKKHAAKGNGFGFGLVNPENKESIARTLSARYHKDGSEI 383 >gi|300899219|ref|ZP_07117494.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 198-1] gi|300357175|gb|EFJ73045.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 198-1] Length = 477 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F G P L +L+ ++ K + Sbjct: 271 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISGCFPAQRVTLAQLLDPMVEAKYIL 329 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 330 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 379 >gi|284921868|emb|CBG34943.1| DNA-cytosine methyltransferase [Escherichia coli 042] Length = 472 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|82543581|ref|YP_407528.1| DNA cytosine methylase [Shigella boydii Sb227] gi|81244992|gb|ABB65700.1| DNA cytosine methylase [Shigella boydii Sb227] gi|332096894|gb|EGJ01883.1| DNA-cytosine methyltransferase [Shigella boydii 3594-74] Length = 472 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|187732725|ref|YP_001879611.1| DNA cytosine methylase [Shigella boydii CDC 3083-94] gi|293446340|ref|ZP_06662762.1| DNA-cytosine methyltransferase [Escherichia coli B088] gi|187429717|gb|ACD08991.1| DNA-cytosine methyltransferase [Shigella boydii CDC 3083-94] gi|291323170|gb|EFE62598.1| DNA-cytosine methyltransferase [Escherichia coli B088] gi|320175451|gb|EFW50550.1| DNA-cytosine methyltransferase [Shigella dysenteriae CDC 74-1112] gi|320184499|gb|EFW59303.1| DNA-cytosine methyltransferase [Shigella flexneri CDC 796-83] Length = 472 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|331663456|ref|ZP_08364366.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA143] gi|331059255|gb|EGI31232.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA143] Length = 472 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|293410317|ref|ZP_06653893.1| conserved hypothetical protein [Escherichia coli B354] gi|291470785|gb|EFF13269.1| conserved hypothetical protein [Escherichia coli B354] Length = 472 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|170019707|ref|YP_001724661.1| DNA cytosine methylase [Escherichia coli ATCC 8739] gi|169754635|gb|ACA77334.1| DNA-cytosine methyltransferase [Escherichia coli ATCC 8739] gi|323940380|gb|EGB36571.1| DNA-cytosine methyltransferase [Escherichia coli E482] gi|332093084|gb|EGI98148.1| DNA-cytosine methyltransferase [Shigella boydii 5216-82] Length = 472 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|188494720|ref|ZP_03001990.1| DNA-cytosine methyltransferase [Escherichia coli 53638] gi|188489919|gb|EDU65022.1| DNA-cytosine methyltransferase [Escherichia coli 53638] Length = 472 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F G P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDINLKADFTLRDISGCFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|82776352|ref|YP_402701.1| DNA cytosine methylase [Shigella dysenteriae Sd197] gi|309789422|ref|ZP_07684012.1| DNA-cytosine methyltransferase [Shigella dysenteriae 1617] gi|81240500|gb|ABB61210.1| DNA cytosine methylase [Shigella dysenteriae Sd197] gi|308922816|gb|EFP68333.1| DNA-cytosine methyltransferase [Shigella dysenteriae 1617] Length = 472 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F G P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISGCFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|331643338|ref|ZP_08344469.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Escherichia coli H736] gi|331036809|gb|EGI09033.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Escherichia coli H736] Length = 491 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F +P G++LE +D K + Sbjct: 289 IDGKHF-LPQHRERIVLVGFRRDLNIHKGFTLRDISRFYPEHRPSFGELLEPVVDSKYIL 347 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + KLWE + + G GFG+GL + TLSARY+KDGSEI Sbjct: 348 TPKLWEYLYNYAKKHAAKGNGFGFGLVNPENKESIARTLSARYHKDGSEI 397 >gi|331645413|ref|ZP_08346517.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Escherichia coli M605] gi|331045575|gb|EGI17701.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Escherichia coli M605] Length = 474 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F +P G++L+ ++DDK + Sbjct: 275 IDGKHF-LPQHRERIVLVGFRRDLNIHKDFTLRNINRFYPQNRPTFGELLDHNVDDKYIL 333 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFEN--SATTNTLSARYYKDGSEI 101 + +LWE + + G GFG+GL + TLSARY+KDGSEI Sbjct: 334 TPRLWEYLYNYAKKHAAKGNGFGFGLVDPKNPDSIARTLSARYHKDGSEI 383 >gi|218701133|ref|YP_002408762.1| DNA cytosine methylase [Escherichia coli IAI39] gi|218371119|emb|CAR18947.1| Modification methylase EcoRII (M.EcoRII) (Cytosine-specific methyltransferase EcoRII) [Escherichia coli IAI39] Length = 491 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F +P G++LE +D K + Sbjct: 289 IDGKHF-LPQHRERIVLVGFRRDLNIHKGFTLRDISRFYPEHRPSFGELLEPVVDSKYIL 347 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + KLWE + + G GFG+GL + TLSARY+KDGSEI Sbjct: 348 TPKLWEYLYNYAKKHAAKGNGFGFGLVNPENKESIARTLSARYHKDGSEI 397 >gi|157158517|ref|YP_001463262.1| DNA cytosine methylase [Escherichia coli E24377A] gi|157080547|gb|ABV20255.1| DNA-cytosine methyltransferase [Escherichia coli E24377A] Length = 472 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDSMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|315290247|gb|EFU49625.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 153-1] Length = 478 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 272 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 330 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 331 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 380 >gi|331653374|ref|ZP_08354379.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M718] gi|331049472|gb|EGI21544.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M718] Length = 472 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|300904853|ref|ZP_07122678.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1] gi|301304244|ref|ZP_07210359.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1] gi|300403236|gb|EFJ86774.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1] gi|300840501|gb|EFK68261.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1] gi|315257206|gb|EFU37174.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 85-1] Length = 472 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISKCFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + +++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQVRGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|218554541|ref|YP_002387454.1| DNA cytosine methylase [Escherichia coli IAI1] gi|260868553|ref|YP_003234955.1| DNA cytosine methylase [Escherichia coli O111:H- str. 11128] gi|218361309|emb|CAQ98893.1| DNA cytosine methylase [Escherichia coli IAI1] gi|257764909|dbj|BAI36404.1| DNA cytosine methylase [Escherichia coli O111:H- str. 11128] gi|323180787|gb|EFZ66327.1| DNA-cytosine methyltransferase [Escherichia coli 1180] Length = 472 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|324018843|gb|EGB88062.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 117-3] Length = 472 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|300956520|ref|ZP_07168803.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 175-1] gi|300316661|gb|EFJ66445.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 175-1] Length = 477 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 271 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 329 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 330 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 379 >gi|320182772|gb|EFW57655.1| DNA-cytosine methyltransferase [Shigella boydii ATCC 9905] Length = 472 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|307138628|ref|ZP_07497984.1| DNA cytosine methylase [Escherichia coli H736] gi|331642581|ref|ZP_08343716.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H736] gi|331039379|gb|EGI11599.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H736] Length = 472 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|193066646|ref|ZP_03047681.1| DNA-cytosine methyltransferase [Escherichia coli E22] gi|260844359|ref|YP_003222137.1| DNA cytosine methylase [Escherichia coli O103:H2 str. 12009] gi|192925721|gb|EDV80380.1| DNA-cytosine methyltransferase [Escherichia coli E22] gi|257759506|dbj|BAI31003.1| DNA cytosine methylase [Escherichia coli O103:H2 str. 12009] Length = 472 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|311279100|ref|YP_003941331.1| DNA-cytosine methyltransferase [Enterobacter cloacae SCF1] gi|308748295|gb|ADO48047.1| DNA-cytosine methyltransferase [Enterobacter cloacae SCF1] Length = 492 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F G+ P G++LE +D K + Sbjct: 287 IDGRHF-LPQHRERIVLVGFRRDLNLHQGFSLRALPGLYPAQRPTFGELLEPTVDAKFIL 345 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFE--NSATTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYGL + TLSARYYKDG+EI Sbjct: 346 TPVLWKYLYRYAKKHQARGNGFGYGLVDPTNPDSVARTLSARYYKDGAEI 395 >gi|300951590|ref|ZP_07165422.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 116-1] gi|300449174|gb|EFK12794.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 116-1] Length = 478 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 272 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 330 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 331 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 380 >gi|194433657|ref|ZP_03065933.1| DNA-cytosine methyltransferase [Shigella dysenteriae 1012] gi|194418086|gb|EDX34179.1| DNA-cytosine methyltransferase [Shigella dysenteriae 1012] gi|332095525|gb|EGJ00541.1| DNA-cytosine methyltransferase [Shigella dysenteriae 155-74] Length = 472 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDFNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|307139342|ref|ZP_07498698.1| DNA cytosine methylase [Escherichia coli H736] Length = 477 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F +P G++LE +D K + Sbjct: 275 IDGKHF-LPQHRERIVLVGFRRDLNIHKGFTLRDISRFYPEHRPSFGELLEPVVDSKYIL 333 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + KLWE + + G GFG+GL + TLSARY+KDGSEI Sbjct: 334 TPKLWEYLYNYAKKHAAKGNGFGFGLVNPENKESIARTLSARYHKDGSEI 383 >gi|323960520|gb|EGB56149.1| DNA-cytosine methyltransferase [Escherichia coli H489] Length = 477 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F +P G++LE +D K + Sbjct: 275 IDGKHF-LPQHRERIVLVGFRRDLNIHKGFTLRDISRFYPEHRPSFGELLEPVVDSKYIL 333 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + KLWE + + G GFG+GL + TLSARY+KDGSEI Sbjct: 334 TPKLWEYLYNYAKKHAAKGNGFGFGLVNPENKESIARTLSARYHKDGSEI 383 >gi|327254549|gb|EGE66165.1| modification methylase EcoRII [Escherichia coli STEC_7v] Length = 474 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F +P G++L+ +DDK + Sbjct: 275 IDGKHF-LPQHRERIVLVGFRRDLNIHKDFTLRNINRFYPQNRPTFGELLDHDVDDKYIL 333 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFEN--SATTNTLSARYYKDGSEI 101 + +LWE + + G GFG+GL + TLSARY+KDGSEI Sbjct: 334 TPRLWEYLYNYAKKHAAKGNGFGFGLVDPKNPDSIARTLSARYHKDGSEI 383 >gi|157161430|ref|YP_001458748.1| DNA cytosine methylase [Escherichia coli HS] gi|157067110|gb|ABV06365.1| DNA-cytosine methyltransferase [Escherichia coli HS] Length = 472 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQTRGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|331668651|ref|ZP_08369499.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA271] gi|331063845|gb|EGI35756.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA271] Length = 458 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 252 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 310 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 311 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 360 >gi|296114735|ref|ZP_06833385.1| DNA-cytosine methyltransferase [Gluconacetobacter hansenii ATCC 23769] gi|295978659|gb|EFG85387.1| DNA-cytosine methyltransferase [Gluconacetobacter hansenii ATCC 23769] Length = 419 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 42/107 (39%), Positives = 59/107 (55%), Gaps = 9/107 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT----PLGIKPRLGDIL--EEHIDDKSTIS 54 + A + VPQ+RER++I+ F +F + P+ PRLG IL ++ K T++ Sbjct: 224 ISAASW-VPQKRERIFIVGFR-EKTDFDLKSLVVPPIEKGPRLGSILLPHAEVEPKYTLT 281 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 LW Q K + AG GFG+GL + TLSARY+KDGSEI Sbjct: 282 EHLWNYLQNYKAKHAAAGNGFGFGLCGPDD-VARTLSARYFKDGSEI 327 >gi|331658007|ref|ZP_08358969.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA206] gi|331056255|gb|EGI28264.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA206] Length = 472 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPIVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|165938005|ref|ZP_02226565.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Yersinia pestis biovar Orientalis str. IP275] gi|165914028|gb|EDR32645.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Yersinia pestis biovar Orientalis str. IP275] Length = 282 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F +P G++LE +D K + Sbjct: 80 IDGKHF-LPQHRERIVLVGFRRDLNIHQGFTLRDISRFYPEQRPSFGELLEPVVDSKYIL 138 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + KLWE + + G GFG+GL + TLSARY+KDGSEI Sbjct: 139 TPKLWEYLYNYAKKHAAKGNGFGFGLVNPENKESIARTLSARYHKDGSEI 188 >gi|62180565|ref|YP_216982.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62128198|gb|AAX65901.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715041|gb|EFZ06612.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 476 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F +P L ++LE ++ K ++ LW+ Sbjct: 276 LPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKY 335 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 336 LYRYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEI 378 >gi|322616984|gb|EFY13892.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618223|gb|EFY15115.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625894|gb|EFY22713.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626346|gb|EFY23156.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632761|gb|EFY29506.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639103|gb|EFY35796.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640419|gb|EFY37075.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647220|gb|EFY43719.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648528|gb|EFY44979.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655540|gb|EFY51848.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660318|gb|EFY56556.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662999|gb|EFY59206.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668184|gb|EFY64343.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674057|gb|EFY70151.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675591|gb|EFY71665.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682998|gb|EFY79014.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686692|gb|EFY82670.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195420|gb|EFZ80600.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198052|gb|EFZ83169.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204476|gb|EFZ89482.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207566|gb|EFZ92514.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210995|gb|EFZ95855.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217551|gb|EGA02270.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323226697|gb|EGA10894.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231573|gb|EGA15686.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236016|gb|EGA20095.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240586|gb|EGA24629.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245478|gb|EGA29478.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247596|gb|EGA31547.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254424|gb|EGA38240.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257764|gb|EGA41444.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262129|gb|EGA45692.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266252|gb|EGA49742.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270729|gb|EGA54168.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 476 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F +P L ++LE ++ K ++ LW+ Sbjct: 276 LPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKY 335 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 336 LYRYAKKHQARGNGFGYGMVYPDNPGSVARTLSARYYKDGAEI 378 >gi|168239231|ref|ZP_02664289.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734985|ref|YP_002115026.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|204931362|ref|ZP_03222061.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|194710487|gb|ACF89708.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288080|gb|EDY27467.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204319845|gb|EDZ05054.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 476 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F +P L ++LE ++ K ++ LW+ Sbjct: 276 LPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKY 335 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 336 LYRYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEI 378 >gi|323158561|gb|EFZ44575.1| DNA-cytosine methyltransferase [Escherichia coli E128010] Length = 472 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLG----DILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVMLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQCVTRTLSARYYKDGAEI 374 >gi|168462467|ref|ZP_02696398.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194443436|ref|YP_002041256.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|238912436|ref|ZP_04656273.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194402099|gb|ACF62321.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|195634356|gb|EDX52708.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 476 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F +P L ++LE ++ K ++ LW+ Sbjct: 276 LPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKY 335 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 336 LYRYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEI 378 >gi|167552776|ref|ZP_02346527.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322616|gb|EDZ10455.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 476 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F +P L ++LE ++ K ++ LW+ Sbjct: 276 LPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKY 335 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 336 LYRYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEI 378 >gi|161613440|ref|YP_001587405.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|205352316|ref|YP_002226117.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856496|ref|YP_002243147.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|161362804|gb|ABX66572.1| hypothetical protein SPAB_01156 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|205272097|emb|CAR36949.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206708299|emb|CAR32602.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326627365|gb|EGE33708.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 476 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F +P L ++LE ++ K ++ LW+ Sbjct: 276 LPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKY 335 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 336 LYRYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEI 378 >gi|317048624|ref|YP_004116272.1| DNA-cytosine methyltransferase [Pantoea sp. At-9b] gi|316950241|gb|ADU69716.1| DNA-cytosine methyltransferase [Pantoea sp. At-9b] Length = 467 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 39/110 (35%), Positives = 51/110 (46%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + A F +PQ RER+ ++ S F P L +LE D K T+ Sbjct: 271 IDARHF-LPQHRERIVLVGIRRDTRLSEGFTLRALAQLYPKKVPTLKSLLEPQPDAKYTL 329 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 S LW + + +K G GFG+GL + TLSARYYKDGSEI Sbjct: 330 SPVLWNYLYQYAKKHKAKGNGFGFGLNDPRNPSVCVRTLSARYYKDGSEI 379 >gi|168259722|ref|ZP_02681695.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205351069|gb|EDZ37700.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 476 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F +P L ++LE ++ K ++ LW+ Sbjct: 276 LPQHRERIVLVGFRRDLNLKTDFTLRNISRCYPPRRPTLAELLEPVVEAKYILTPVLWKY 335 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 336 LYRYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEI 378 >gi|200390041|ref|ZP_03216652.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199602486|gb|EDZ01032.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 476 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F +P L ++LE ++ K ++ LW+ Sbjct: 276 LPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKY 335 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 336 LYRYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEI 378 >gi|56413096|ref|YP_150171.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362022|ref|YP_002141659.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127353|gb|AAV76859.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093499|emb|CAR58960.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 476 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F +P L ++LE ++ K ++ LW+ Sbjct: 276 LPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKY 335 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 336 LYRYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEI 378 >gi|198242597|ref|YP_002215094.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197937113|gb|ACH74446.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326622842|gb|EGE29187.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 476 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F +P L ++LE ++ K ++ LW+ Sbjct: 276 LPQHRERIVLVGFRRDLNLKTDFTLRNISRCYPPRRPTLAELLEPVVEAKYILTPVLWKY 335 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 336 LYRYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEI 378 >gi|197251440|ref|YP_002146032.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197215143|gb|ACH52540.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 476 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F +P L ++LE ++ K ++ LW+ Sbjct: 276 LPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKY 335 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 336 LYRYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEI 378 >gi|16765328|ref|NP_460943.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167993566|ref|ZP_02574660.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|16420526|gb|AAL20902.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205328427|gb|EDZ15191.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261247157|emb|CBG24980.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993981|gb|ACY88866.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158505|emb|CBW18015.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912981|dbj|BAJ36955.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224636|gb|EFX49699.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130270|gb|ADX17700.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332988880|gb|AEF07863.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 476 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F +P L ++LE ++ K ++ LW+ Sbjct: 276 LPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKY 335 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 336 LYRYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEI 378 >gi|224583511|ref|YP_002637309.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224468038|gb|ACN45868.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 476 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F +P L ++LE ++ K ++ LW+ Sbjct: 276 LPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKY 335 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 336 LYRYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEI 378 >gi|168244842|ref|ZP_02669774.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194449372|ref|YP_002046042.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194407676|gb|ACF67895.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205336375|gb|EDZ23139.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 476 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F +P L ++LE ++ K ++ LW+ Sbjct: 276 LPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKY 335 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 336 LYRYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEI 378 >gi|134044844|ref|YP_001102126.1| cytosine-specific methyltransferase [Yersinia pestis biovar Orientalis str. IP275] gi|133905378|gb|ABO42140.1| cytosine-specific methyltransferase [Yersinia pestis biovar Orientalis str. IP275] Length = 274 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F +P G++LE +D K + Sbjct: 72 IDGKHF-LPQHRERIVLVGFRRDLNIHQGFTLRDISRFYPEQRPSFGELLEPVVDSKYIL 130 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + KLWE + + G GFG+GL + TLSARY+KDGSEI Sbjct: 131 TPKLWEYLYNYAKKHAAKGNGFGFGLVNPENKESIARTLSARYHKDGSEI 180 >gi|168234164|ref|ZP_02659222.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168821682|ref|ZP_02833682.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194470868|ref|ZP_03076852.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197263635|ref|ZP_03163709.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|194457232|gb|EDX46071.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197241890|gb|EDY24510.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205331847|gb|EDZ18611.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205341769|gb|EDZ28533.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320085391|emb|CBY95172.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 476 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F +P L ++LE ++ K ++ LW+ Sbjct: 276 LPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKY 335 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 336 LYRYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEI 378 >gi|16760934|ref|NP_456551.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141374|ref|NP_804716.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213424982|ref|ZP_03357732.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|289829483|ref|ZP_06547095.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25286126|pir||AH0754 site-specific DNA-methyltransferase (cytosine-specific) (EC 2.1.1.73) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503231|emb|CAD05739.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Typhi] gi|29137001|gb|AAO68565.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 476 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F +P L ++LE ++ K ++ LW+ Sbjct: 276 LPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKY 335 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 336 LYRYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEI 378 >gi|331673470|ref|ZP_08374238.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA280] gi|331069668|gb|EGI41055.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA280] Length = 472 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIK----PRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFSAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|306814216|ref|ZP_07448382.1| DNA cytosine methylase [Escherichia coli NC101] gi|305852375|gb|EFM52826.1| DNA cytosine methylase [Escherichia coli NC101] Length = 472 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISACFPAQRVTLAQLLDPIVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|283785730|ref|YP_003365595.1| DNA-cytosine methyltransferase [Citrobacter rodentium ICC168] gi|282949184|emb|CBG88792.1| DNA-cytosine methyltransferase [Citrobacter rodentium ICC168] Length = 477 Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 9/105 (8%) Query: 6 FGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTISNKLW 58 + +PQ RER+ ++ F +F P L ++LE ++ K ++ LW Sbjct: 275 YFLPQHRERIVLVGFRRDLNLKGDFTLRDISTRYPQRRTTLAELLEPVVEAKYVLTPVLW 334 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + + ++ G GFGYG+ + T TLSARYYKDG+EI Sbjct: 335 KYLYRYAKKHQAKGNGFGYGMVSPSDPNSVTRTLSARYYKDGAEI 379 >gi|146312197|ref|YP_001177271.1| DNA cytosine methylase [Enterobacter sp. 638] gi|145319073|gb|ABP61220.1| DNA-cytosine methyltransferase [Enterobacter sp. 638] Length = 471 Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F + P + ++LE D K + Sbjct: 265 IDGKHF-LPQHRERIVLVGFRRDLNLKGDFTLRDIPSLYPAHRPSVAELLEPAFDAKFIL 323 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFG+G+ + T TLSARYYKDG+EI Sbjct: 324 TPVLWKYLYRYAKKHQAKGNGFGFGMVDPRNPHSVTRTLSARYYKDGAEI 373 >gi|118614638|ref|YP_908421.1| DNA methyltrasferase [Photobacterium damselae subsp. piscicida] gi|118596729|dbj|BAF38033.1| DNA methyltrasferase [Photobacterium damselae subsp. piscicida] Length = 266 Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F +P G++LE +D K + Sbjct: 64 IDGKHF-LPQHRERIVLVGFRRDLNIHQGFTLRDISRFYPEQRPSFGELLEPVVDSKYIL 122 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + KLWE + + G GFG+GL + TLSARY+KDGSEI Sbjct: 123 TPKLWEYLYNYAKKHAAKGNGFGFGLVNPENKESIARTLSARYHKDGSEI 172 >gi|48093754|gb|AAT40239.1| Eco128I DNA methylase [Escherichia coli] Length = 332 Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F +P G++LE +D K + Sbjct: 194 IDGKHF-LPQHRERIVLVGFRRDLNIHQGFTLRDISRFYPEQRPSFGELLEPVVDSKYIL 252 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + KLWE + + G GFG+GL + TLSARY+KDGSEI Sbjct: 253 TPKLWEYLYNYAKKHAAKGNGFGFGLVNPENKESIARTLSARYHKDGSEI 302 >gi|114571596|ref|YP_758276.1| DNA-cytosine methyltransferase [Maricaulis maris MCS10] gi|114342058|gb|ABI67338.1| DNA-cytosine methyltransferase [Maricaulis maris MCS10] Length = 406 Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats. Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 10/102 (9%) Query: 8 VPQRRERLYIIDFLNPSVEFKF-----PTPLGIKPRLGDILEEHIDD---KSTISNKLWE 59 VPQ+RER++I+ F S +F F P D + + ++ K T++ KLW+ Sbjct: 228 VPQKRERVFIVGFR-DSTDFSFEGFERLIPHASNHPTLDSILQSHNEIGQKYTLTEKLWD 286 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 Q ++ ++ G GFGY LF + TLSARY+KDGSEI Sbjct: 287 YLQAYRQKHESKGNGFGYSLFGPDD-VARTLSARYHKDGSEI 327 >gi|296282358|ref|ZP_06860356.1| DNA-cytosine methyltransferase [Citromicrobium bathyomarinum JL354] Length = 439 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 8/100 (8%) Query: 8 VPQRRERLYIIDFLNPSV----EFKFPTPLGIKPRLGDIL--EEHIDDKSTISNKLWEGH 61 VPQ+RER++I+ F S + P + P+LG IL + +D K T++ +LWE Sbjct: 250 VPQKRERIFIVGFREKSAFNLAGLEIPA-VADGPKLGSILEPHDQVDPKYTLTPRLWEYL 308 Query: 62 QKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 Q+ ++ ++ G GFGY LF TLSARY+KDGSEI Sbjct: 309 QEYRKKHEAKGNGFGYSLFGPGD-VARTLSARYHKDGSEI 347 >gi|294979850|pdb|3ME5|A Chain A, Crystal Structure Of Putative Dna Cytosine Methylase From Shigella Flexneri 2a Str. 301 Length = 482 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 268 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPXVEAKYIL 326 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG + N+ T TLSARYYKDG+EI Sbjct: 327 TPVLWKYLYRYAKKHQARGNGFGYGXVYPNNPQSVTRTLSARYYKDGAEI 376 >gi|259909642|ref|YP_002649998.1| DNA cytosine methylase [Erwinia pyrifoliae Ep1/96] gi|224965264|emb|CAX56796.1| Cytosine-specific methyltransferase [Erwinia pyrifoliae Ep1/96] gi|261863687|gb|ACY01298.1| unknown [Erwinia pyrifoliae] gi|283479721|emb|CAY75637.1| DNA cytosine methylase [Erwinia pyrifoliae DSM 12163] Length = 473 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + +F +PQ RER+ ++ F F +P G +LE+ +D K + Sbjct: 275 IDGKNF-LPQHRERIVLVGFRRDLNIHQNFTLSNISRYFPDKRPEFGSLLEKTVDSKYIL 333 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + +LWE + + G GFG+GL ++ TLSARY+KDGSEI Sbjct: 334 TPRLWEYLYNYAKKHAAKGNGFGFGLVDPTNSGSVARTLSARYHKDGSEI 383 >gi|288934555|ref|YP_003438614.1| DNA-cytosine methyltransferase [Klebsiella variicola At-22] gi|288889264|gb|ADC57582.1| DNA-cytosine methyltransferase [Klebsiella variicola At-22] Length = 466 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F ++P G++LE +D K + Sbjct: 260 IDGRHF-LPQHRERIVLVGFRRDLQLHEGFTLRDIAALYPAVRPTFGELLEPTVDAKFIL 318 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + ++ G GFGYGL + TLSARYYKDG+EI Sbjct: 319 TPVLWKYLYRYARKHQARGNGFGYGLVDPGNPHSVARTLSARYYKDGAEI 368 >gi|152970972|ref|YP_001336081.1| DNA cytosine methylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955821|gb|ABR77851.1| DNA cytosine methylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 477 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F ++P G++LE +D K + Sbjct: 271 IDGRHF-LPQHRERIVLVGFRRDLQLHAGFTLRDIAAQYPAVRPTFGELLEPTVDSKFIL 329 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + ++ G GFGYGL + TLSARYYKDG+EI Sbjct: 330 TPVLWKYLYRYARKHQARGNGFGYGLVDPANPHSVARTLSARYYKDGAEI 379 >gi|170769440|ref|ZP_02903893.1| DNA-cytosine methyltransferase [Escherichia albertii TW07627] gi|170121764|gb|EDS90695.1| DNA-cytosine methyltransferase [Escherichia albertii TW07627] Length = 472 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLG----DILEEHIDDKSTI 53 + F +PQ RER+ ++ F F P +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKASFTLRDINQCFPTQRVTLAQLLDPVVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 325 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 374 >gi|206577074|ref|YP_002237693.1| DNA-cytosine methyltransferase [Klebsiella pneumoniae 342] gi|206566132|gb|ACI07908.1| DNA-cytosine methyltransferase [Klebsiella pneumoniae 342] Length = 477 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F ++P G++LE +D K + Sbjct: 271 IDGRHF-LPQHRERIVLVGFRRDLQLHEGFTLRDIAALYPAVRPTFGELLEPTVDAKFIL 329 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + ++ G GFGYGL + TLSARYYKDG+EI Sbjct: 330 TPVLWKYLYRYARKHQARGNGFGYGLVDPGNPHSVARTLSARYYKDGAEI 379 >gi|238895488|ref|YP_002920223.1| DNA cytosine methylase [Klebsiella pneumoniae NTUH-K2044] gi|330000908|ref|ZP_08303852.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. MS 92-3] gi|238547805|dbj|BAH64156.1| DNA cytosine methylase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328537840|gb|EGF64032.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. MS 92-3] Length = 477 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F ++P G++LE +D K + Sbjct: 271 IDGRHF-LPQHRERIVLVGFRRDLQLHAGFTLRDIAAQYPAVRPTFGELLEPTVDAKFIL 329 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + ++ G GFGYGL + TLSARYYKDG+EI Sbjct: 330 TPVLWKYLYRYARKHQARGNGFGYGLVDPANPHSVARTLSARYYKDGAEI 379 >gi|86136173|ref|ZP_01054752.1| hypothetical protein MED193_18659 [Roseobacter sp. MED193] gi|85827047|gb|EAQ47243.1| hypothetical protein MED193_18659 [Roseobacter sp. MED193] Length = 399 Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats. Identities = 49/122 (40%), Positives = 57/122 (46%), Gaps = 23/122 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPT---PLGIKPRLGDILEE----------- 45 + A + VPQ RER++I F F P G PRL DIL Sbjct: 201 IDARSW-VPQHRERIFISGFRRDVPTRFCLDDVVIPPGPNPRLSDILHPENGSEIAEPPY 259 Query: 46 ------HIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGS 99 I DK T+S+KLW Q +K AG GFG+GL S TLSARYYKDGS Sbjct: 260 TEGHLARIADKYTLSDKLWAYLQNYAAKHKAAGNGFGFGLCTPES-VARTLSARYYKDGS 318 Query: 100 EI 101 EI Sbjct: 319 EI 320 >gi|213581465|ref|ZP_03363291.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 295 Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F +P L ++LE ++ K ++ LW+ Sbjct: 108 LPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKY 167 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 168 LYRYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEI 210 >gi|213622824|ref|ZP_03375607.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 324 Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F +P L ++LE ++ K ++ LW+ Sbjct: 124 LPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKY 183 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 184 LYRYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEI 226 >gi|213650730|ref|ZP_03380783.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 405 Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F +P L ++LE ++ K ++ LW+ Sbjct: 205 LPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKY 264 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 265 LYRYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEI 307 >gi|161502886|ref|YP_001569998.1| DNA cytosine methylase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864233|gb|ABX20856.1| hypothetical protein SARI_00944 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 476 Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ +F +P L ++LE ++ K ++ LW+ Sbjct: 276 LPQHRERIVLVGVRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKY 335 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 336 LYCYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEI 378 >gi|262043463|ref|ZP_06016586.1| DNA (cytosine-5-)-methyltransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039205|gb|EEW40353.1| DNA (cytosine-5-)-methyltransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 477 Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F + P G++LE +D K + Sbjct: 271 IDGRHF-LPQHRERIVLVGFRRDLQLHAGFTLRDIAAQYPAVWPTFGELLEPTVDAKFIL 329 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + ++ G GFGYGL + TLSARYYKDG+EI Sbjct: 330 TPVLWKYLYRYARKHQARGNGFGYGLVDPANPHSVARTLSARYYKDGAEI 379 >gi|148244085|ref|YP_001220322.1| DNA-cytosine methyltransferase [Acidiphilium cryptum JF-5] gi|146400648|gb|ABQ29180.1| DNA-cytosine methyltransferase [Acidiphilium cryptum JF-5] Length = 487 Score = 103 bits (256), Expect = 9e-21, Method: Composition-based stats. Identities = 44/123 (35%), Positives = 59/123 (47%), Gaps = 25/123 (20%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF-----PTPLGIKPRLGDILEEH--------- 46 + A + VPQ RER++I F + + EF F P P PRL IL Sbjct: 285 IDAKSW-VPQHRERIFIAGFRDRNAEFTFKTLDIPDP-ASGPRLASILHPEDGTEKPDGH 342 Query: 47 --------IDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 + ++ T+++ LW Q E ++ AG GFG+GL TLSARYYKDG Sbjct: 343 FTEGPLATVTERYTLTDHLWNYLQNYAEKHRRAGNGFGFGLCGPED-VARTLSARYYKDG 401 Query: 99 SEI 101 SEI Sbjct: 402 SEI 404 >gi|291463698|pdb|3LX6|A Chain A, Structure Of Probable Cytosine-Specific Methyltransferase From Shigella Flexneri gi|291463699|pdb|3LX6|B Chain B, Structure Of Probable Cytosine-Specific Methyltransferase From Shigella Flexneri Length = 410 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 206 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPXVEAKYIL 264 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG + N+ T TLSARYYKDG+EI Sbjct: 265 TPVLWKYLYRYAKKHQARGNGFGYGXVYPNNPQSVTRTLSARYYKDGAEI 314 >gi|304398880|ref|ZP_07380750.1| DNA-cytosine methyltransferase [Pantoea sp. aB] gi|304353584|gb|EFM17961.1| DNA-cytosine methyltransferase [Pantoea sp. aB] Length = 458 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 38/109 (34%), Positives = 52/109 (47%), Gaps = 9/109 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTP----LGIKPRLGDILEEHIDDKSTIS 54 + A F +PQ RER+ ++ +F P L +LE DDK +S Sbjct: 266 IDARHF-LPQHRERIVLVGIRRDLKKQDFTLRDIRRFYPAQVPSLQSLLERAPDDKYILS 324 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 LW + + +K G GFG+GL ++ TLSARYYKDGSEI Sbjct: 325 PVLWRYLYQYAKKHKAKGNGFGFGLNDPHNPDCCVRTLSARYYKDGSEI 373 >gi|212716092|ref|ZP_03324220.1| hypothetical protein BIFCAT_01005 [Bifidobacterium catenulatum DSM 16992] gi|212661459|gb|EEB22034.1| hypothetical protein BIFCAT_01005 [Bifidobacterium catenulatum DSM 16992] Length = 453 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 53/117 (45%), Gaps = 25/117 (21%) Query: 8 VPQRRERLYIIDFLNPSVEFKF-----------------------PTPLGIKPRLGDILE 44 VPQ RER+YI+ F + +F + P R D Sbjct: 242 VPQHRERIYIVGFRS-HTDFTWDDLKLPEHKPVLADILHKNDGTEPYLPWDGDRYFDYEH 300 Query: 45 EHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + DK T++ +LW+ Q K ++ G GFGYGL + TLSARY+KDGSEI Sbjct: 301 NKVQDKYTLTPRLWQYLQDYKAKHEAMGHGFGYGLVTP-DMVSRTLSARYHKDGSEI 356 >gi|188533556|ref|YP_001907353.1| DNA cytosine methylase [Erwinia tasmaniensis Et1/99] gi|188028598|emb|CAO96460.1| DNA-cytosine methyltransferase [Erwinia tasmaniensis Et1/99] Length = 469 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 9/108 (8%) Query: 2 KACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGD----ILEEHIDDKSTISN 55 F +PQ RER+ ++ F F + PR +L+ +++K ++ Sbjct: 275 DGKHF-LPQHRERIVLVGFRRDLQLPAFSLSLLPALYPRQRTPLNALLDSQVEEKYILTP 333 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFFE--NSATTNTLSARYYKDGSEI 101 LW+ + ++ G GFGYGL + TLSARYYKDGSEI Sbjct: 334 TLWKYLYHYAKKHQARGNGFGYGLVDPALENGVVRTLSARYYKDGSEI 381 >gi|237732007|ref|ZP_04562488.1| DNA cytosine methylase [Citrobacter sp. 30_2] gi|226907546|gb|EEH93464.1| DNA cytosine methylase [Citrobacter sp. 30_2] Length = 476 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F + P L ++LE +D K ++ LW+ Sbjct: 276 LPQHRERIVLVGFRRDLNLKSDFTLRDIVTRYPQRRTTLAELLEPTVDAKYILTPVLWKY 335 Query: 61 HQKRKENNKIAGKGFGYGLFFE--NSATTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + + T TLSARYYKDG+EI Sbjct: 336 LYRYAKKHQARGNGFGYGMVYPGNPDSVTRTLSARYYKDGAEI 378 >gi|290508755|ref|ZP_06548126.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. 1_1_55] gi|289778149|gb|EFD86146.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. 1_1_55] Length = 477 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F ++P G++LE D K + Sbjct: 271 IDGRHF-LPQHRERIVLVGFRRDLQLHEGFTLRDIAALYPAVRPTFGELLEPTADAKFIL 329 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + ++ G GFGYGL + TLSARYYKDG+EI Sbjct: 330 TPVLWKYLYRYARKHQARGNGFGYGLVDPGNPHSVARTLSARYYKDGAEI 379 >gi|308187315|ref|YP_003931446.1| DNA cytosine methylase [Pantoea vagans C9-1] gi|308057825|gb|ADO09997.1| DNA cytosine methylase [Pantoea vagans C9-1] Length = 458 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 38/109 (34%), Positives = 52/109 (47%), Gaps = 9/109 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTP----LGIKPRLGDILEEHIDDKSTIS 54 + A F +PQ RER+ ++ +F P L +LE+ DDK +S Sbjct: 266 IDARHF-LPQHRERIVLVGIRRDLKKQDFTLRDIRRFYPAQVPSLQSLLEKAPDDKYILS 324 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 LW + + +K G GFG+GL + TLSARYYKDGSEI Sbjct: 325 PVLWRYLYQYAKKHKAKGNGFGFGLNDPRNPDCCVRTLSARYYKDGSEI 373 >gi|315498495|ref|YP_004087299.1| transcriptional regulator, xre family [Asticcacaulis excentricus CB 48] gi|315416507|gb|ADU13148.1| transcriptional regulator, XRE family [Asticcacaulis excentricus CB 48] Length = 410 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 42/121 (34%), Positives = 55/121 (45%), Gaps = 23/121 (19%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT---PLGIKPRLGDILEEH----------- 46 + A F VPQ RER+ I+ F F + P +L IL Sbjct: 218 IDAQHF-VPQHRERIVIVGFREDVP-FSWDDLNLPPKGSVKLSSILHPENAIEEAEPPYT 275 Query: 47 ------IDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSE 100 + K T+++KLW Q + +K AG GFG+GL + TLSARYYKDGSE Sbjct: 276 TGIRAEVASKYTLTDKLWAYLQNYADKHKAAGNGFGFGLVGPGD-VSRTLSARYYKDGSE 334 Query: 101 I 101 I Sbjct: 335 I 335 >gi|324112381|gb|EGC06359.1| DNA-cytosine methyltransferase [Escherichia fergusonii B253] Length = 473 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F +P G +LE +D K + Sbjct: 275 IDGKHF-LPQHRERIVLVGFRRDLNIHQGFTLRDIDRFYPQQRPLFGQLLESSVDSKYIL 333 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENS--ATTNTLSARYYKDGSEI 101 S KLW+ + + G GFG+GL N+ + TLSARY+KDGSEI Sbjct: 334 SPKLWQYLYNYAKKHAAKGNGFGFGLVDPNNANSVARTLSARYHKDGSEI 383 >gi|325499566|gb|EGC97425.1| DNA cytosine methylase [Escherichia fergusonii ECD227] Length = 473 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F +P G +LE +D K + Sbjct: 275 IDGKHF-LPQHRERIVLVGFRRDLNIHQGFTLRDIDRFYPQQRPLFGQLLESSVDSKYIL 333 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENS--ATTNTLSARYYKDGSEI 101 S KLW+ + + G GFG+GL N+ + TLSARY+KDGSEI Sbjct: 334 SPKLWQYLYNYAKKHAAKGNGFGFGLVDPNNANSVARTLSARYHKDGSEI 383 >gi|218551294|ref|YP_002385086.1| DNA cytosine methylase [Escherichia fergusonii ATCC 35469] gi|218358836|emb|CAQ91493.1| DNA modification methylase [Escherichia fergusonii ATCC 35469] Length = 485 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F +P G +LE +D K + Sbjct: 287 IDGKHF-LPQHRERIVLVGFRRDLNIHQGFTLRDIDRFYPQQRPLFGQLLESSVDSKYIL 345 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENS--ATTNTLSARYYKDGSEI 101 S KLW+ + + G GFG+GL N+ + TLSARY+KDGSEI Sbjct: 346 SPKLWQYLYNYAKKHAAKGNGFGFGLVDPNNANSVARTLSARYHKDGSEI 395 >gi|300724477|ref|YP_003713798.1| DNA cytosine methylase [Xenorhabdus nematophila ATCC 19061] gi|297631015|emb|CBJ91699.1| DNA cytosine methylase [Xenorhabdus nematophila ATCC 19061] Length = 476 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 16/113 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFK-------FPTPLGIKPRLGDILEEHIDDK 50 + +F +PQ RER+ ++ F F FP +P L ++L+ ++D K Sbjct: 275 IDGQNF-LPQHRERIVLVGFRRDLNIHQGFTLRNMNQLFPAQ---RPTLKELLDSNVDKK 330 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 ++ LW+ + ++ G GFG+GL F ++ TLSARY+KDGSEI Sbjct: 331 YILTPALWKYLYNYAKKHQAKGNGFGFGLVFPDNPNSVARTLSARYHKDGSEI 383 >gi|291085206|ref|ZP_06352388.2| DNA (cytosine-5-)-methyltransferase [Citrobacter youngae ATCC 29220] gi|291072321|gb|EFE10430.1| DNA (cytosine-5-)-methyltransferase [Citrobacter youngae ATCC 29220] Length = 476 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F + L D+LE ++ K ++ LW+ Sbjct: 276 LPQHRERIVLVGFRRDLQLKSDFTLRNIATCYPRRRTTLADLLEPTVEAKYVLTPVLWKY 335 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + + T TLSARYYKDG+EI Sbjct: 336 LYRYAKKHQARGNGFGYGMVYPGNPDCVTRTLSARYYKDGAEI 378 >gi|121997219|ref|YP_001002006.1| DNA-cytosine methyltransferase [Halorhodospira halophila SL1] gi|121588624|gb|ABM61204.1| DNA-cytosine methyltransferase [Halorhodospira halophila SL1] Length = 436 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 24/115 (20%) Query: 8 VPQRRERLYIIDFLNPSV----EFKFPTPL-----------------GIKPRLGDILEEH 46 VPQ RER+Y++ F + + FP P GD+ Sbjct: 241 VPQHRERIYMVGFRKDTPFTWNQLDFPAPDARTLREVLHPEDGSEAAEPPYTEGDL--AT 298 Query: 47 IDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + DK +S KLW+ Q + ++ AG GFGY T TLSARY+KDGSEI Sbjct: 299 VGDKYVLSEKLWKYLQDYRAKHEHAGNGFGYSKVGPED-TARTLSARYHKDGSEI 352 >gi|331677842|ref|ZP_08378517.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H591] gi|331074302|gb|EGI45622.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H591] Length = 320 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 114 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYIL 172 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + N+ T TLSARYYKDG+EI Sbjct: 173 TPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEI 222 >gi|10957343|ref|NP_058367.1| DNA cytosine methylase [Salmonella typhi] gi|7800396|gb|AAF69992.1|AF250878_153 EcoRII cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi] gi|145849042|emb|CAM91602.1| ecoRII cytosine methylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 475 Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 16/113 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFK-------FPTPLGIKPRLGDILEEHIDDK 50 + +F PQ RER+ ++ F F +P+ +P LG++L+ +D + Sbjct: 271 IDGKNFR-PQHRERIVLVGFRRDLKLHDGFSLSGVSALYPS---RRPTLGELLDAEVDSR 326 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 +S KLWE + ++ G GFG+GL TLSARYY+DGSEI Sbjct: 327 YILSPKLWEYLYNYAKKHQAKGNGFGFGLVNPLDKSVVCRTLSARYYRDGSEI 379 >gi|310767946|gb|ADP12896.1| DNA cytosine methylase [Erwinia sp. Ejp617] Length = 467 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 9/108 (8%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKF-----PTPLGIKPRL-GDILEEHIDDKSTISN 55 F +PQ RER+ ++ F F P ++ +L+ H++ K ++ Sbjct: 273 DGKHF-LPQHRERIILVGFRRDLKLPAFSLSALPALYPLQRTPLKALLDSHVEAKYILTP 331 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFFE--NSATTNTLSARYYKDGSEI 101 LW+ + + ++ G GFGYGL + TLSARYYKDGSEI Sbjct: 332 TLWKYLYQYAKKHQARGNGFGYGLVDPVLENGVVRTLSARYYKDGSEI 379 >gi|259908144|ref|YP_002648500.1| DNA cytosine methylase [Erwinia pyrifoliae Ep1/96] gi|224963766|emb|CAX55267.1| DNA-cytosine methyltransferase [Erwinia pyrifoliae Ep1/96] gi|283478063|emb|CAY73979.1| DNA cytosine methylase [Erwinia pyrifoliae DSM 12163] Length = 467 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 9/108 (8%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKF-----PTPLGIKPRL-GDILEEHIDDKSTISN 55 F +PQ RER+ ++ F F P ++ +L+ H++ K ++ Sbjct: 273 DGKHF-LPQHRERIILVGFRRDLKLPAFSLSALPALYPLQRTPLKALLDSHVEAKYILTP 331 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFFE--NSATTNTLSARYYKDGSEI 101 LW+ + + ++ G GFGYGL + TLSARYYKDGSEI Sbjct: 332 TLWKYLYQYAKKHQARGNGFGYGLVDPALENGVVRTLSARYYKDGSEI 379 >gi|254526757|ref|ZP_05138809.1| modification methylase EcoRII [Prochlorococcus marinus str. MIT 9202] gi|221538181|gb|EEE40634.1| modification methylase EcoRII [Prochlorococcus marinus str. MIT 9202] Length = 298 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 24/122 (19%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPL----GIKPRLGDILEEH---------- 46 + A F VPQ R+R+YI+ F + F F + P L +L Sbjct: 99 INAKSF-VPQNRQRIYIVGFREEN-NFNFDDLIIPDISKGPTLSSVLHPEDGSENFEDPY 156 Query: 47 -------IDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGS 99 +++K TI+NKLW+ + ++ ++ G GFG+GL TLSARY+KDG+ Sbjct: 157 TIPHLSKVNEKYTITNKLWDYLKMYEKKHRAKGNGFGFGLCKRED-VARTLSARYHKDGA 215 Query: 100 EI 101 EI Sbjct: 216 EI 217 >gi|260752101|ref|YP_003237616.1| putative DNA modification methylase [Escherichia coli O111:H- str. 11128] gi|257767571|dbj|BAI39065.1| putative DNA modification methylase [Escherichia coli O111:H- str. 11128] Length = 475 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 16/113 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFK-------FPTPLGIKPRLGDILEEHIDDK 50 + +F PQ RER+ ++ F F +P+ +P LG++L+ +D + Sbjct: 271 IDGKNFR-PQHRERIVLVGFRRDLKLHDGFSLSGVSALYPS---RRPTLGELLDAEVDSR 326 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 +S KLWE + ++ G GFG+GL TLSARYY+DGSEI Sbjct: 327 YILSPKLWEYLYNYAKKHQAKGNGFGFGLVNPLDKSVVCRTLSARYYRDGSEI 379 >gi|313651376|gb|EFS15772.1| modification methylase EcoRII [Shigella flexneri 2a str. 2457T] Length = 463 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 16/113 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFK-------FPTPLGIKPRLGDILEEHIDDK 50 + +F PQ RER+ ++ F F +P+ +P LG++L+ +D + Sbjct: 259 IDGKNFR-PQHRERIVLVGFRRDLKLHDGFSLSGVSALYPS---RRPTLGELLDAEVDSR 314 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 +S KLWE + ++ G GFG+GL TLSARYY+DGSEI Sbjct: 315 YILSPKLWEYLYNYAKKHQAKGNGFGFGLVNPLDKSVVCRTLSARYYRDGSEI 367 >gi|260598469|ref|YP_003211040.1| DNA cytosine methylase [Cronobacter turicensis z3032] gi|260217646|emb|CBA31957.1| DNA-cytosine methyltransferase [Cronobacter turicensis z3032] Length = 450 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKF---PTP-LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F F P +P G++L+ +D + + Sbjct: 246 IDGKHF-LPQHRERIVLVGFRRDLNLHDGFTLRALPELYPARRPAFGELLDPTVDARYVL 304 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYGL + TLSARYYKDG+EI Sbjct: 305 TPTLWKYLYRYAQKHQAKGNGFGYGLVDPQNPASVARTLSARYYKDGAEI 354 >gi|323222338|gb|EGA06720.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] Length = 259 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F +P L ++LE ++ K ++ LW+ Sbjct: 59 LPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKY 118 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 119 LYRYAKKHQARGNGFGYGMVYPDNPGSVARTLSARYYKDGAEI 161 >gi|18466581|ref|NP_569389.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|160431784|ref|YP_001551898.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Choleraesuis] gi|16505897|emb|CAD09776.1| putative DNA modification methylase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|159885325|dbj|BAF92929.1| putative DNA modification methylase [Salmonella enterica subsp. enterica serovar Choleraesuis] Length = 475 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 16/113 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFK-------FPTPLGIKPRLGDILEEHIDDK 50 + +F PQ RER+ ++ F F +P+ +P LG++L+ +D + Sbjct: 271 IDGKNFR-PQHRERIVLVGFRRDLKLHDGFSLSGVSALYPS---RRPTLGELLDAEVDSR 326 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 +S KLWE + ++ G GFG+GL TLSARYY+DGSEI Sbjct: 327 YILSPKLWEYLYNYAKKHQAKGNGFGFGLVNPLDKSVVCRTLSARYYRDGSEI 379 >gi|226942156|ref|YP_002797230.1| Cytosine-specific methyltransferase [Laribacter hongkongensis HLHK9] gi|226717083|gb|ACO76221.1| Cytosine-specific methyltransferase [Laribacter hongkongensis HLHK9] Length = 420 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 55/125 (44%), Gaps = 27/125 (21%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF---PTPLGIKPRLGDILEEH----------- 46 + F PQ RER+ I F V F + P P L +L Sbjct: 224 IDGAHF-TPQHRERILIAGFR-EPVAFDWDAIPLPPKGSRTLRTVLHRTDGSEPVLPWDG 281 Query: 47 ----------IDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 + DK T++ KLW+ Q E ++ G GFG+GL +S T TLSARYYK Sbjct: 282 DRFFDHQARCVQDKYTLTPKLWDYLQAYAEKHRAKGNGFGFGLVGPDS-VTRTLSARYYK 340 Query: 97 DGSEI 101 DGSEI Sbjct: 341 DGSEI 345 >gi|327394286|dbj|BAK11708.1| modification methylase EcoRII [Pantoea ananatis AJ13355] Length = 459 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + A F +PQ RER+ ++ S +F P L +LE DDK + Sbjct: 266 IDARFF-LPQHRERIVLVGIRRDIAGSAQFSLRDIRQFFPAQVPSLQSLLEPQPDDKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSATT--NTLSARYYKDGSEI 101 S LW + + +K G GFG+GL ++ TLSARYYKDGSEI Sbjct: 325 SPVLWRYLYQYAKKHKARGNGFGFGLNDPHNVHCCVRTLSARYYKDGSEI 374 >gi|291617874|ref|YP_003520616.1| EcoRIIM [Pantoea ananatis LMG 20103] gi|291152904|gb|ADD77488.1| EcoRIIM [Pantoea ananatis LMG 20103] Length = 459 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTI 53 + A F +PQ RER+ ++ S +F P L +LE DDK + Sbjct: 266 IDARFF-LPQHRERIVLVGIRRDIAGSAQFSLRDIRQFFPAQVPSLQSLLEPQPDDKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSATT--NTLSARYYKDGSEI 101 S LW + + +K G GFG+GL ++ TLSARYYKDGSEI Sbjct: 325 SPVLWRYLYQYAKKHKARGNGFGFGLNDPHNVHCCVRTLSARYYKDGSEI 374 >gi|217980150|ref|YP_002364200.1| DNA-cytosine methyltransferase [Thauera sp. MZ1T] gi|217508321|gb|ACK55106.1| DNA-cytosine methyltransferase [Thauera sp. MZ1T] Length = 419 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 42/125 (33%), Positives = 54/125 (43%), Gaps = 27/125 (21%) Query: 2 KACDFGVPQRRERLYIIDFLN-PSVEFKFPT---PLGIKPRLGDILEE------------ 45 F VPQ RER+ I+ F N + F + P + DIL Sbjct: 218 DGAHF-VPQHRERILIVGFRNEDGIRFDWDAVGLPQKGVHVMRDILHRTDGTEPVLPWDG 276 Query: 46 ---------HIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 + DK T++ KLW Q + ++ G GFG+GL S TLSARYYK Sbjct: 277 DRFFDHAGRRVQDKYTLTPKLWRYLQDYADKHRAKGNGFGFGLVHPGS-VARTLSARYYK 335 Query: 97 DGSEI 101 DGSEI Sbjct: 336 DGSEI 340 >gi|300717257|ref|YP_003742060.1| cytosine-specific methyltransferase [Erwinia billingiae Eb661] gi|299063093|emb|CAX60213.1| Cytosine-specific methyltransferase [Erwinia billingiae Eb661] Length = 466 Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 9/109 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLG----DILEEHIDDKSTIS 54 + F +PQ RER+ ++ EF + P+ ++E +D K ++ Sbjct: 272 IDGKHF-LPQHRERIVLVGMRRDLKLPEFTLKALSTLYPKQRIPLRALMEPEVDSKYILT 330 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFE--NSATTNTLSARYYKDGSEI 101 LW+ + ++ G GFGYGL + TLSARYYKDGSEI Sbjct: 331 PTLWKYLYNYAKKHQAKGNGFGYGLVDPQVETGVVRTLSARYYKDGSEI 379 >gi|157145245|ref|YP_001452564.1| DNA cytosine methylase [Citrobacter koseri ATCC BAA-895] gi|157082450|gb|ABV12128.1| hypothetical protein CKO_00981 [Citrobacter koseri ATCC BAA-895] Length = 477 Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L ++LE ++ + + Sbjct: 271 IDGRHF-LPQHRERIVLVGFRRDLNLKTDFTLRDIATRYPQQRITLAELLEPAVEARYVL 329 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYG+ + + T TLSARYYKDG+EI Sbjct: 330 TPVLWKYLYRYAKKHQARGNGFGYGMVYPANPGSVTRTLSARYYKDGAEI 379 >gi|156933419|ref|YP_001437335.1| DNA cytosine methylase [Cronobacter sakazakii ATCC BAA-894] gi|156531673|gb|ABU76499.1| hypothetical protein ESA_01237 [Cronobacter sakazakii ATCC BAA-894] Length = 481 Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MKACDFGVPQRRERLYIIDFL---NPSVEFKF---PTP-LGIKPRLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F N F P +P G++L+ +D + + Sbjct: 277 IDGKHF-LPQHRERIVLVGFRRSLNLHDGFTLRALPEFYPARRPAFGELLDPTVDARYVL 335 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + LW+ + + ++ G GFGYGL + TLSARYYKDG+EI Sbjct: 336 TPTLWKYLYRYAQKHQAKGNGFGYGLVDPQNPASVARTLSARYYKDGAEI 385 >gi|213853126|ref|ZP_03382658.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 219 Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEG 60 +PQ RER+ ++ F +F +P L ++LE ++ K ++ LW+ Sbjct: 19 LPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKY 78 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 + + ++ G GFGYG+ + ++ TLSARYYKDG+EI Sbjct: 79 LYRYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEI 121 >gi|209520785|ref|ZP_03269531.1| DNA-cytosine methyltransferase [Burkholderia sp. H160] gi|209498782|gb|EDZ98891.1| DNA-cytosine methyltransferase [Burkholderia sp. H160] Length = 432 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 25/116 (21%) Query: 9 PQRRERLYIIDFLNPSVEFKF-----------------------PTPLGIKPRLGDILEE 45 PQ RER+ I+ F + F + P R D Sbjct: 238 PQHRERIIIVGFRGET-TFTWDDLRLPEQGPRLGAILHRKDGSEPVLPWDHDRFFDHAAR 296 Query: 46 HIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + K T++ KLW Q ++ AG GFG+GL + +S T TLSARY+KDGSEI Sbjct: 297 RVQPKYTLTPKLWAYLQNYAAKHRAAGNGFGFGLAYPDS-VTRTLSARYHKDGSEI 351 >gi|261337441|ref|ZP_05965325.1| modification methylase HpaII [Bifidobacterium gallicum DSM 20093] gi|270277829|gb|EFA23683.1| modification methylase HpaII [Bifidobacterium gallicum DSM 20093] Length = 442 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 23/116 (19%) Query: 8 VPQRRERLYIIDFLNPSV----EFKFPTPLGI------------------KPRLGDILEE 45 VPQ RER+YI+ F + + + KFP I + D + Sbjct: 231 VPQHRERIYIVGFCSKTDFTWDDLKFPDHQPILADILHKTDGTEPYLPWDGDKYFDFEHQ 290 Query: 46 HIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + DK T++ +LW+ Q ++ ++ G GFGYGL + TLSARY+KDGSEI Sbjct: 291 KVQDKYTLTPRLWQYLQDYRKKHEALGHGFGYGLVTP-DMVSRTLSARYHKDGSEI 345 >gi|170691874|ref|ZP_02883038.1| DNA-cytosine methyltransferase [Burkholderia graminis C4D1M] gi|170143158|gb|EDT11322.1| DNA-cytosine methyltransferase [Burkholderia graminis C4D1M] Length = 438 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 25/116 (21%) Query: 9 PQRRERLYIIDFLNPSVEFKF-----------------------PTPLGIKPRLGDILEE 45 PQ RER+ II F + + EF F P R D ++ Sbjct: 245 PQHRERIVIIGFRSDT-EFSFDDLRLPATGPRLASILHKTDGSEPLLPHDGERFFDHVQR 303 Query: 46 HIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + K T++ LW Q + ++ AG GFG+GL S T TLSARY+KDGSEI Sbjct: 304 KVQPKYTLTPNLWAYLQAYADKHRAAGNGFGFGLVTPAS-VTRTLSARYHKDGSEI 358 >gi|254251049|ref|ZP_04944367.1| Site-specific DNA methylase [Burkholderia dolosa AUO158] gi|124893658|gb|EAY67538.1| Site-specific DNA methylase [Burkholderia dolosa AUO158] Length = 530 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 51/117 (43%), Gaps = 26/117 (22%) Query: 9 PQRRERLYIIDFLNPSVEFKF------------------------PTPLGIKPRLGDILE 44 PQ RER+ I+ F P+ F + P R D + Sbjct: 331 PQHRERIVIVGFREPTP-FSWESLQLPEKGGIKMKDILHKLDGSEPRLEHDGDRYFDHEK 389 Query: 45 EHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + ++DK T++ LW+ Q +K G GFGYGL TLSARYYKDGSEI Sbjct: 390 QKVNDKYTLTPNLWKYLQDYAAKHKAKGNGFGYGLVGPED-IARTLSARYYKDGSEI 445 >gi|323525262|ref|YP_004227415.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1001] gi|323382264|gb|ADX54355.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1001] Length = 428 Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 39/116 (33%), Positives = 50/116 (43%), Gaps = 25/116 (21%) Query: 9 PQRRERLYIIDFLNPSVEFKF-----------------------PTPLGIKPRLGDILEE 45 PQ RER+ I+ F + F F P R D + Sbjct: 235 PQHRERIVIVGFREETG-FSFDDLRLPANGPRLASILHKTDGSEPLLPHDGERFFDHVRR 293 Query: 46 HIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + K T++ LW Q E ++ AG GFG+GL S T TLSARY+KDGSEI Sbjct: 294 KVQPKYTLTPNLWAYLQAYAEKHRAAGNGFGFGLVTPAS-VTRTLSARYHKDGSEI 348 >gi|295675907|ref|YP_003604431.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1002] gi|295435750|gb|ADG14920.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1002] Length = 430 Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 25/116 (21%) Query: 9 PQRRERLYIIDFLNPSVEFKF-----------------------PTPLGIKPRLGDILEE 45 PQ RER+ I+ F + F + P R D Sbjct: 236 PQHRERIIIVGFRGKTA-FTWDDLRLPDEGPRLGAILHRTDGTEPVLPWDHDRFFDHATR 294 Query: 46 HIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + K T++ KLW Q ++ AG GFG+G+ + +S T TLSARY+KDGSEI Sbjct: 295 RVQPKYTLTPKLWAYLQNYAAKHRAAGNGFGFGMAYPDS-VTRTLSARYHKDGSEI 349 >gi|189423370|ref|YP_001950547.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ] gi|189419629|gb|ACD94027.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ] Length = 415 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 52/112 (46%), Gaps = 19/112 (16%) Query: 8 VPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEH-----------------IDD 49 VPQ RER+ I+ F + F P+L IL + + Sbjct: 226 VPQHRERIIIVGFREKTGFSFDSLQLPKEGPKLFSILHPEDGTEQEETPFTVGDKAKVHE 285 Query: 50 KSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 K ++N LW Q +K AG GFG+GL +N T TLSARYYKDGSEI Sbjct: 286 KYILTNNLWSYLQAYAAKHKAAGNGFGFGLVGKND-TARTLSARYYKDGSEI 336 >gi|292488627|ref|YP_003531511.1| DNA cytosine methylase [Erwinia amylovora CFBP1430] gi|292899788|ref|YP_003539157.1| modification methylase EcoRII [Erwinia amylovora ATCC 49946] gi|291199636|emb|CBJ46755.1| modification methylase EcoRII [Erwinia amylovora ATCC 49946] gi|291554058|emb|CBA21160.1| DNA cytosine methylase [Erwinia amylovora CFBP1430] gi|312172770|emb|CBX81026.1| DNA cytosine methylase [Erwinia amylovora ATCC BAA-2158] Length = 469 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 9/108 (8%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKF-----PTPLGIKPRLGD-ILEEHIDDKSTISN 55 F +PQ RER+ ++ F F P + +L+ ++ K ++ Sbjct: 275 DGKHF-LPQHRERIILVGFRRDLKLPAFSLSALPAWYPQQRTPLHALLDTDVEAKYILTP 333 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFFE--NSATTNTLSARYYKDGSEI 101 LW+ + ++ G GFGYGL + TLSARYYKDGSEI Sbjct: 334 TLWKYLYHYAKKHQARGNGFGYGLVDPALENGVVRTLSARYYKDGSEI 381 >gi|329298618|ref|ZP_08255954.1| DNA cytosine methylase [Plautia stali symbiont] Length = 465 Score = 99.3 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 36/109 (33%), Positives = 48/109 (44%), Gaps = 10/109 (9%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV---EFKFPTP----LGIKPRLGDILEEHIDDKSTIS 54 A F +PQ RER+ ++ + F P L +LE K +S Sbjct: 270 DARHF-LPQHRERIVLVGIRRDTGLSEGFSLRALAALYPPEVPALHSLLELQPAAKYILS 328 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENSATT--NTLSARYYKDGSEI 101 LW + + +K G GFG+GL + TLSARYYKDGSEI Sbjct: 329 PTLWHYLYQYAKKHKAKGNGFGFGLNDPRNPHCCVRTLSARYYKDGSEI 377 >gi|254429380|ref|ZP_05043087.1| DNA-cytosine methyltransferase superfamily [Alcanivorax sp. DG881] gi|196195549|gb|EDX90508.1| DNA-cytosine methyltransferase superfamily [Alcanivorax sp. DG881] Length = 435 Score = 99.3 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 26/118 (22%) Query: 8 VPQRRERLYIIDFLNPSVEFKF------------------------PTPLGIKPRLGDIL 43 VPQ RER+ I+ F P F + P R D Sbjct: 244 VPQHRERIAIVGFREPMP-FSWDAMKMAGKGEKRMREVLHREDGSEPYLEWDGDRFFDHG 302 Query: 44 EEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + +++K ++ KLW+ + K ++ G GFG+GL +S TLSARYYKDGSEI Sbjct: 303 KGEVNEKYILTPKLWKYLKDYKAKHQAKGNGFGFGLVGPDS-VARTLSARYYKDGSEI 359 >gi|54293106|ref|YP_125521.1| hypothetical protein lpl0145 [Legionella pneumophila str. Lens] gi|53752938|emb|CAH14374.1| hypothetical protein lpl0145 [Legionella pneumophila str. Lens] Length = 417 Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 42/121 (34%), Positives = 55/121 (45%), Gaps = 23/121 (19%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT---PLGIKPRLGDILEEH----IDDKSTI 53 + A F VPQ RER++I+ F F + P L IL I++K Sbjct: 220 IDANGF-VPQHRERIFIVGFREDLP-FSWNDLRLPPKNSVLLESILHPENGTEIEEKPYT 277 Query: 54 -------------SNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSE 100 S+KLW Q K+ + G GFG+GL E + TLSARY+KDGSE Sbjct: 278 FGEKAEVSSCFTLSDKLWNYLQDYKKKHSEKGNGFGFGLVSEKN-IARTLSARYHKDGSE 336 Query: 101 I 101 I Sbjct: 337 I 337 >gi|296159065|ref|ZP_06841892.1| DNA-cytosine methyltransferase [Burkholderia sp. Ch1-1] gi|295890626|gb|EFG70417.1| DNA-cytosine methyltransferase [Burkholderia sp. Ch1-1] Length = 426 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 25/116 (21%) Query: 9 PQRRERLYIIDFLNPSVEFKF-----------------------PTPLGIKPRLGDILEE 45 PQ RER+ I+ F + F + P R D Sbjct: 232 PQHRERIIIVGFRGET-SFSWDDLHLPENGPRLGSILHRTDGSEPVLPWDHDRFFDHTSR 290 Query: 46 HIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + K T++ LW Q E ++ AG GFG+G+ + +S T TLSARY+KDGSEI Sbjct: 291 RVQPKYTLTPNLWTYLQNYAEKHRAAGNGFGFGMAYPDS-VTRTLSARYHKDGSEI 345 >gi|126464142|ref|YP_001045255.1| DNA-cytosine methyltransferase [Rhodobacter sphaeroides ATCC 17029] gi|126105953|gb|ABN78483.1| DNA-cytosine methyltransferase [Rhodobacter sphaeroides ATCC 17029] Length = 417 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 26/124 (20%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV------EFKFPTPLGIKPRLGDILEE--------- 45 + A F VPQ RER++I+ + P+ + PR G +L + Sbjct: 216 IDARCF-VPQHRERIFIVGVRKDLDMKIDLSKLVLPSGV-TGPRFGTVLHKEDGSELPNN 273 Query: 46 --------HIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKD 97 + D+ T+S+KLW+ Q E ++ G GFG+GL TLSARY+KD Sbjct: 274 RSFLDPEGRVSDRYTLSDKLWKYLQDYAEKHRQKGNGFGFGL-TRRGDVARTLSARYHKD 332 Query: 98 GSEI 101 GSEI Sbjct: 333 GSEI 336 >gi|149184876|ref|ZP_01863193.1| hypothetical protein ED21_17522 [Erythrobacter sp. SD-21] gi|148830987|gb|EDL49421.1| hypothetical protein ED21_17522 [Erythrobacter sp. SD-21] Length = 410 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 58/121 (47%), Gaps = 23/121 (19%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT---PLGIKPRLGDILEEH----------- 46 + A F +PQ RER+ ++ F S F + P+ + R+ +L Sbjct: 216 LNARHF-LPQNRERIVLVGFREKSG-FDWADLKLPVEGEARMRSVLHPENGSEIAESHYT 273 Query: 47 ------IDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSE 100 + K T+SN LW+ + ++ AG GFGYGL + T TLSARYYKDGSE Sbjct: 274 EGELATVSAKYTLSNHLWKYLRDYSAKHRAAGNGFGYGLVGPDD-TCRTLSARYYKDGSE 332 Query: 101 I 101 I Sbjct: 333 I 333 >gi|328947602|ref|YP_004364939.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] gi|328447926|gb|AEB13642.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] Length = 431 Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 41/118 (34%), Positives = 52/118 (44%), Gaps = 26/118 (22%) Query: 8 VPQRRERLYIIDFLNPSVEFKF------------------------PTPLGIKPRLGDIL 43 VPQ RER+ I+ F N V+F P + D Sbjct: 233 VPQHRERIVIVGFRN-KVDFSLEDMELPPKGEVKLASILHKTDGTEPRLPQDGDKYFDFE 291 Query: 44 EEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + DK T+++ LW Q + ++ G GFGYGL EN TLSARYYKDGSEI Sbjct: 292 NNKVLDKYTLTDNLWAYLQAYAQKHRSMGNGFGYGLVNEND-IARTLSARYYKDGSEI 348 >gi|119355933|ref|YP_910577.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM 266] gi|119353282|gb|ABL64153.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM 266] Length = 425 Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 22/121 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFK-FPTPLGIKPRLGDILEEH------------ 46 + A ++ VPQ RER++I F F F P G + + + + Sbjct: 218 IDAGNW-VPQHRERIFIAGFREDCGFSFDRFDLPHGNERPVIETILHPENGMEDEEPPYT 276 Query: 47 ------IDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSE 100 I D+ T+S+ LWE QK E ++ G GFG+GL + TLSARYYKDGSE Sbjct: 277 VGPLARISDRYTLSDHLWEYLQKYAEKHRAKGNGFGFGLVGPHD-VARTLSARYYKDGSE 335 Query: 101 I 101 I Sbjct: 336 I 336 >gi|157412142|ref|YP_001481483.1| DNA cytosine methylase [Escherichia coli APEC O1] gi|99867167|gb|ABF67812.1| cytosine methylase [Escherichia coli APEC O1] Length = 489 Score = 97.8 bits (242), Expect = 4e-19, Method: Composition-based stats. Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 9/102 (8%) Query: 9 PQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEGH 61 PQ RER+ +I F F +P L D+L+ +D K +S KLWE Sbjct: 292 PQHRERIVLIGFRRDLRLKDGFTLRDIKDFYPDKRPSLSDLLDPSVDSKYILSPKLWEYL 351 Query: 62 QKRKENNKIAGKGFGYGLFFEN--SATTNTLSARYYKDGSEI 101 + + G GFG+GL + ++ T TLS+RY KDGSEI Sbjct: 352 YNYAKKHAAKGNGFGFGLVDPSNVNSVTRTLSSRYMKDGSEI 393 >gi|226807724|ref|YP_002791420.1| Dcm [Enterobacter cloacae] gi|226810038|ref|YP_002791733.1| Dcm [Enterobacter cloacae] gi|226425951|gb|ACO54044.1| Dcm [Enterobacter cloacae] gi|226426265|gb|ACO54357.1| Dcm [Enterobacter cloacae] Length = 489 Score = 97.8 bits (242), Expect = 4e-19, Method: Composition-based stats. Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 9/102 (8%) Query: 9 PQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEGH 61 PQ RER+ +I F F +P L D+L+ +D K +S KLWE Sbjct: 292 PQHRERIVLIGFRRDLRLKDGFTLRDIKDFYPDKRPSLSDLLDPSVDSKYILSPKLWEYL 351 Query: 62 QKRKENNKIAGKGFGYGLFFEN--SATTNTLSARYYKDGSEI 101 + + G GFG+GL + ++ T TLS+RY KDGSEI Sbjct: 352 YNYAKKHAAKGNGFGFGLVDPSNVNSVTRTLSSRYMKDGSEI 393 >gi|38347986|ref|NP_941235.1| DNA cytosine methylase [Serratia marcescens] gi|190410308|ref|YP_001965811.1| dcm [Klebsiella pneumoniae] gi|38259463|emb|CAE51691.1| DNA-cytosine methyltransferase [Serratia marcescens] gi|146151102|gb|ABQ02868.1| dcm [Klebsiella pneumoniae] Length = 475 Score = 97.8 bits (242), Expect = 4e-19, Method: Composition-based stats. Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 9/102 (8%) Query: 9 PQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEGH 61 PQ RER+ +I F F +P L D+L+ +D K +S KLWE Sbjct: 278 PQHRERIVLIGFRRDLRLKDGFTLRDIKDFYPDKRPSLSDLLDPSVDSKYILSPKLWEYL 337 Query: 62 QKRKENNKIAGKGFGYGLFFEN--SATTNTLSARYYKDGSEI 101 + + G GFG+GL + ++ T TLS+RY KDGSEI Sbjct: 338 YNYAKKHAAKGNGFGFGLVDPSNVNSVTRTLSSRYMKDGSEI 379 >gi|187923141|ref|YP_001894783.1| DNA-cytosine methyltransferase [Burkholderia phytofirmans PsJN] gi|187714335|gb|ACD15559.1| DNA-cytosine methyltransferase [Burkholderia phytofirmans PsJN] Length = 426 Score = 97.8 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 25/116 (21%) Query: 9 PQRRERLYIIDFLNPSVEFKF-----------------------PTPLGIKPRLGDILEE 45 PQ RER+ I+ F + F + P R D Sbjct: 232 PQHRERIIIVGFRGKTA-FSWDDLRLPQDGPRLGSILHRTDGSEPVLPWDHDRFFDHAGR 290 Query: 46 HIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + K T++ LW Q E ++ AG GFG+G+ + S T TLSARY+KDGSEI Sbjct: 291 RVQPKYTLTPNLWTYLQNYAEKHRAAGNGFGFGMAYPTS-VTRTLSARYHKDGSEI 345 >gi|307729019|ref|YP_003906243.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1003] gi|307583554|gb|ADN56952.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1003] Length = 428 Score = 97.8 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 39/116 (33%), Positives = 50/116 (43%), Gaps = 25/116 (21%) Query: 9 PQRRERLYIIDFLNPSVEFKF-----------------------PTPLGIKPRLGDILEE 45 PQ RER+ I+ F + F F P R D + Sbjct: 235 PQHRERIVIVGFRQETG-FSFDDLKLPASGPRLASILHKTDGSEPLLPHDGERFFDPVRR 293 Query: 46 HIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + K T++ LW Q E ++ AG GFG+GL S T TLSARY+KDGSEI Sbjct: 294 SVQPKYTLTPNLWAYLQAYAEKHRAAGNGFGFGLVTPAS-VTRTLSARYHKDGSEI 348 >gi|327198092|ref|YP_004306459.1| gp47 [Burkholderia phage KL3] gi|310657226|gb|ADP02340.1| gp47 [Burkholderia phage KL3] Length = 422 Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 25/116 (21%) Query: 9 PQRRERLYIIDFLNPSVEFKF-----------------------PTPLGIKPRLGDILEE 45 PQ RER+ I+ F + F + P R D + Sbjct: 229 PQHRERIVIVGFRKKTG-FSWDDLRLPADGPRLASILHKTDGSEPVLPWDGERFFDHEKR 287 Query: 46 HIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + K T++ LW Q E ++ AG GFG+G+ + +S T TLSARY+KDGSEI Sbjct: 288 KVQSKYTLTPNLWTYLQAYAEKHRAAGNGFGFGMAYPDS-VTRTLSARYHKDGSEI 342 >gi|186476891|ref|YP_001858361.1| DNA-cytosine methyltransferase [Burkholderia phymatum STM815] gi|184193350|gb|ACC71315.1| DNA-cytosine methyltransferase [Burkholderia phymatum STM815] Length = 428 Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 40/124 (32%), Positives = 54/124 (43%), Gaps = 26/124 (20%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF-----------------------PTPLGIKP 37 + F PQ RER+ +I F + F + P Sbjct: 230 IDGAHF-TPQHRERIIMIGFRART-SFSWDDLRLPEEGPRLASILHRTDGTEPVLPWDGD 287 Query: 38 RLGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKD 97 R D H+ K T++ KLW Q + ++ AG GFGYG+ + S T TLSARY+KD Sbjct: 288 RFFDHAARHVQPKYTLTPKLWTYLQNYADKHRAAGNGFGYGMAYPQS-VTRTLSARYHKD 346 Query: 98 GSEI 101 GSEI Sbjct: 347 GSEI 350 >gi|91782477|ref|YP_557683.1| C-5 cytosine-specific DNA methylase [Burkholderia xenovorans LB400] gi|91686431|gb|ABE29631.1| C-5 cytosine-specific DNA methylase [Burkholderia xenovorans LB400] Length = 418 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 38/119 (31%), Positives = 51/119 (42%), Gaps = 25/119 (21%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKF-----------------------PTPLGIKPRLGDI 42 + PQ RER+ I+ F + EF F P R D Sbjct: 228 YFTPQHRERIVIVGFREET-EFTFDDLNVPAEGPRLASILHKTDGSEPVLAHDGDRFFDH 286 Query: 43 LEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + + T++ LW Q ++ AG GFG+GL +S T TLSARY+KDGSEI Sbjct: 287 ASREVQPRYTLTANLWAYLQAYAAKHRAAGNGFGFGLVTPDS-VTRTLSARYFKDGSEI 344 >gi|46581246|ref|YP_012054.1| type II DNA modification methyltransferase [Desulfovibrio vulgaris str. Hildenborough] gi|46450667|gb|AAS97314.1| type II DNA modification methyltransferase, putative [Desulfovibrio vulgaris str. Hildenborough] gi|311234912|gb|ADP87766.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1] Length = 358 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 16/116 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLN-----------PSVEFKF--PTPLGIKPRLGDILEEHI 47 + A D+ +PQ RER++++ F +F F + G + L ++E + Sbjct: 166 IDARDW-IPQHRERIFMVGFRLPEACPAGAQKWDVKDFDFGKVSRRGSQKDLESVIEPDV 224 Query: 48 DDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFEN--SATTNTLSARYYKDGSEI 101 +K T+ W + K N+ G+GFGYG+ TT TLSARY+KDG+EI Sbjct: 225 PEKYTLGPGTWNTLVRHKANHAAKGQGFGYGMITPPFAGQTTRTLSARYHKDGAEI 280 >gi|7636053|emb|CAB88410.1| putative methyltransferase [Serratia marcescens] Length = 290 Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 9/102 (8%) Query: 9 PQRRERLYIIDFLNP---SVEFKFPTP----LGIKPRLGDILEEHIDDKSTISNKLWEGH 61 PQ RER+ +I F F +P L D+L+ +D K +S LWE Sbjct: 93 PQHRERIVLIGFRRDLRLKDGFTLRDIKDFYPDKRPSLSDLLDPSVDSKYILSPXLWEYL 152 Query: 62 QKRKENNKIAGKGFGYGLFFEN--SATTNTLSARYYKDGSEI 101 + + G GFG+GL + ++ T TLS+RY KDGSEI Sbjct: 153 YNYAKKHAAKGNGFGFGLVDPSNVNSVTRTLSSRYMKDGSEI 194 >gi|320156908|ref|YP_004189287.1| DNA-cytosine methyltransferase [Vibrio vulnificus MO6-24/O] gi|319932220|gb|ADV87084.1| DNA-cytosine methyltransferase [Vibrio vulnificus MO6-24/O] Length = 552 Score = 95.1 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 17/116 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI-------------LEEHI 47 + +F PQ RER+ ++ VE P + + ++ L E Sbjct: 304 IDGMNF-TPQHRERIVLVGVRKDLVEKN-PEYKKLSLKNIEVPQERLRVSDILTDLSEEE 361 Query: 48 DDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTLSARYYKDGSEI 101 K T++ LW ++ G GFG+GL ++ T TLSARYYKDGSEI Sbjct: 362 TKKYTLTPNLWNYLYHYALKHQSKGNGFGFGLVDPSNPNAVTRTLSARYYKDGSEI 417 >gi|320331203|gb|EFW87160.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea str. race 4] gi|330882725|gb|EGH16874.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea str. race 4] Length = 420 Score = 94.7 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 25/116 (21%) Query: 9 PQRRERLYIIDFLNPSVEFKFPTP-----------------------LGIKPRLGDILEE 45 PQ RER+ I+ F F + + R D + Sbjct: 228 PQHRERIIIVGFR-EKTGFSWDDLRLPTDGPRLASILHKTDGTERVLPWDEDRFFDHKKR 286 Query: 46 HIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + K T++ LW Q E ++ AG GFG+G+ F +S T TLSARY+KDGSEI Sbjct: 287 VVQPKYTLTPNLWAYLQAYAEKHRAAGNGFGFGMAFPDS-VTRTLSARYHKDGSEI 341 >gi|238898088|ref|YP_002923769.1| DNA cytosine methylase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465848|gb|ACQ67622.1| DNA cytosine methylase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 401 Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 25/116 (21%) Query: 9 PQRRERLYIIDFLNPSVEFKFP--TPLGIKPRLGDILEEH-------------------- 46 PQ RER+ I+ F F + PRL IL Sbjct: 208 PQHRERIIIVGFR-EKTGFSWDDLKLPEEGPRLASILHRTDGTEPVLPWDGERFFDHDRR 266 Query: 47 -IDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + + T++ LW Q + ++ AG GFG+G+ + +S T TLSARY+KDGSEI Sbjct: 267 AVPLRYTLTPNLWAYLQAYADKHRAAGNGFGFGIVYPDS-VTRTLSARYHKDGSEI 321 >gi|149926993|ref|ZP_01915251.1| C-5 cytosine-specific DNA methylase [Limnobacter sp. MED105] gi|149824214|gb|EDM83434.1| C-5 cytosine-specific DNA methylase [Limnobacter sp. MED105] Length = 435 Score = 93.5 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 44/125 (35%), Positives = 55/125 (44%), Gaps = 27/125 (21%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF---PTPLGIKPRLGDILEE------------ 45 + F PQ RER+ I F V F + P P +L +IL + Sbjct: 238 IDGAHF-TPQHRERILIAGF-ADQVAFDWDAIPLPPKGSRKLKEILHKTDGSEPYLPWDE 295 Query: 46 ---------HIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 + DK T++ LW Q +K G GFG+GL S TT TLSARYYK Sbjct: 296 NRFFDHDSKKVQDKYTLTPGLWTYLQNYAAKHKAKGNGFGFGLVGPES-TTRTLSARYYK 354 Query: 97 DGSEI 101 DGSEI Sbjct: 355 DGSEI 359 >gi|261252209|ref|ZP_05944782.1| DNA-cytosine methyltransferase [Vibrio orientalis CIP 102891] gi|260935600|gb|EEX91589.1| DNA-cytosine methyltransferase [Vibrio orientalis CIP 102891] Length = 584 Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 11/105 (10%) Query: 8 VPQRRERLYIIDFLNPSV---------EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 +PQ RER+ ++ + PT + L + K T++ LW Sbjct: 307 LPQHRERVVLVGVRKDLTIDKSKLSLNNIQKPTERVPLKDILCELSDEDSSKYTLTPNLW 366 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENS--ATTNTLSARYYKDGSEI 101 ++ G GFG+GL ++ T TLSARY+KDGSEI Sbjct: 367 NYLYNYALKHQTQGNGFGFGLVDPSNINTVTRTLSARYHKDGSEI 411 >gi|255514225|gb|EET90487.1| DNA-cytosine methyltransferase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 328 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 14/113 (12%) Query: 1 MKACDFGVPQRRERLYIIDF--LNPSVEFKFPTPLGIKP-----------RLGDILEEHI 47 + A ++GVPQ+R+R++ I P P + + + + + Sbjct: 156 LNAANYGVPQKRQRIFFIGVNRRQAEKAILPPVPTHSEHPTNGLKPWVPSKQFLLPPQKV 215 Query: 48 DDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSE 100 + S ++ G +RK+ N GFG+ S +NT+SARY+KDG+E Sbjct: 216 SKRFYYSERMINGFIRRKKKNAERNIGFGWQFLD-FSKPSNTISARYWKDGAE 267 >gi|332188292|ref|ZP_08390019.1| DNA-cytosine methyltransferase family protein [Sphingomonas sp. S17] gi|332011688|gb|EGI53766.1| DNA-cytosine methyltransferase family protein [Sphingomonas sp. S17] Length = 423 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 28/120 (23%) Query: 8 VPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGD-------------------------- 41 VPQ R+R+ ++ F V F + L P + D Sbjct: 229 VPQHRQRILLVGFQKD-VGFDWEKVLAKMPAVADGPKLASILHREDGTEEEGEDDDRRFI 287 Query: 42 ILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + + + K ++++LW+ Q E ++ AG GFG + T+ TLSARYYKDGSEI Sbjct: 288 LADGKVQKKYVLTDRLWQYLQGYAEKHRQAGNGFGCSVVGPKD-TSRTLSARYYKDGSEI 346 >gi|169786848|ref|YP_001700742.1| modification methylase (cytosine-specific methyltransferase)(HpaIIM-like) [Acinetobacter baumannii SDF] gi|169150765|emb|CAP02959.1| modification methylase (Cytosine-specific methyltransferase)(HpaIIM-like) [Acinetobacter baumannii] Length = 366 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 4/94 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDD-KSTISNKL 57 + A DFGVPQ RER++I+ F + +F++PTP G K D+ EE++ K +SN+ Sbjct: 186 INAKDFGVPQNRERIFIVGFHKDTGVHDFEYPTPTGKKVCFADVKEENVVPTKYYLSNQY 245 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + ++ K +++ G GFGY + +++ N + Sbjct: 246 LQTLERHKAHHESKGNGFGYAII-PDNSIANAIV 278 >gi|261400408|ref|ZP_05986533.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970] gi|269209852|gb|EEZ76307.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970] Length = 362 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 4/93 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDI-LEEHIDDKSTISNKLW 58 A DFGVPQ RER++I+ F + +FK+P P GI+ DI ++ + K +S + Sbjct: 181 NAKDFGVPQNRERIFIVGFRGDTDIKDFKYPEPTGIQTAFRDIREKDTVPTKYYLSTQYI 240 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + +K K+ ++ G GFGY + + N + Sbjct: 241 DTLRKHKQRHEEKGNGFGYEIIS-DDGIANAIV 272 >gi|225076313|ref|ZP_03719512.1| hypothetical protein NEIFLAOT_01354 [Neisseria flavescens NRL30031/H210] gi|224952437|gb|EEG33646.1| hypothetical protein NEIFLAOT_01354 [Neisseria flavescens NRL30031/H210] Length = 359 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 4/94 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDI-LEEHIDDKSTISNKL 57 + A DFGVPQ RER++I+ F + +F++P P+G+K DI +E + K +S Sbjct: 181 INAKDFGVPQNRERIFIVGFHPDTKVNDFEYPKPIGLKTSFSDIREKETVPTKYYLSTVY 240 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + +K KE ++ G GFGY + + N + Sbjct: 241 IDTLRKHKERHEAKGNGFGYEII-PDDGIANAIV 273 >gi|159027151|emb|CAO86782.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 347 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 4/94 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEE-HIDDKSTISNKL 57 + A FGVPQ R R++I+ F F +P P + L DILEE + K +SN+ Sbjct: 145 LNARYFGVPQNRPRIFIVGFREDLNIYHFSYPQPTHPETCLKDILEEKEVSVKYYLSNQY 204 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 E K K ++ G GFGY + N + Sbjct: 205 LETLFKHKARHENKGNGFGYEIISP-DGIANAIV 237 >gi|313668796|ref|YP_004049080.1| C-5 cytosine-specific DNA-methylase [Neisseria lactamica ST-640] gi|313006258|emb|CBN87720.1| C-5 cytosine-specific DNA-methylase [Neisseria lactamica 020-06] Length = 362 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 4/93 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDI-LEEHIDDKSTISNKLW 58 A DFGVPQ RER++I+ F + +FK+P P GI+ DI ++ + K +S + Sbjct: 181 NAKDFGVPQNRERIFIVGFRGDTDIKDFKYPEPTGIQTAFQDIREKDTVPTKYYLSTQYI 240 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + +K K+ ++ G GFGY + + N + Sbjct: 241 DTLRKHKQRHEEKGNGFGYEIIS-DDGIANAIV 272 >gi|166368121|ref|YP_001660394.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa NIES-843] gi|166090494|dbj|BAG05202.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa NIES-843] Length = 347 Score = 87.0 bits (214), Expect = 7e-16, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 4/94 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEE-HIDDKSTISNKL 57 + A FGVPQ R R++I+ F F +P P + L DILEE + K +SN+ Sbjct: 145 LNARYFGVPQNRPRIFIVGFREDLNIYHFSYPQPTHQETCLKDILEEKEVSVKYYLSNQY 204 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 E K K ++ G GFGY + N + Sbjct: 205 LETLFKHKARHQHKGNGFGYEIIS-TDGIANAIV 237 >gi|27497145|gb|AAO17336.1| methylase [Neisseria lactamica] Length = 384 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 4/93 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDI-LEEHIDDKSTISNKLW 58 A DFGVPQ RER++I+ F + F++P P GI+ DI ++ + K +S + Sbjct: 203 NAKDFGVPQNRERIFIVGFRGDTDIKYFEYPEPTGIQTAFRDIREKDTVPTKYYLSTQYI 262 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + +K K+ ++ G GFGY + + N + Sbjct: 263 DTLRKHKQRHEEKGNGFGYEIIS-DDGIANAIV 294 >gi|309378773|emb|CBX22599.1| putative DNA cytosine methyltransferase [Neisseria lactamica Y92-1009] Length = 342 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 4/93 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDI-LEEHIDDKSTISNKLW 58 A DFGVPQ RER++I+ F + F++P P GI+ DI ++ + K +S + Sbjct: 161 NAKDFGVPQNRERIFIVGFRGDTDIKYFEYPEPTGIQTAFRDIREKDTVPTKYYLSTQYI 220 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + +K K+ ++ G GFGY + + N + Sbjct: 221 DTLRKHKQRHEEKGNGFGYEIIS-DDGIANAIV 252 >gi|167854713|ref|ZP_02477492.1| cell division protein MukB [Haemophilus parasuis 29755] gi|167854127|gb|EDS25362.1| cell division protein MukB [Haemophilus parasuis 29755] Length = 361 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDD-KSTISNKL 57 + A DFGVPQ RER++I+ F F +P PL K D+ E+++ K +S + Sbjct: 181 LNAKDFGVPQNRERIFIVGFRQDLAINSFYYPAPLNRKVCFNDVKEKNVVPTKYYLSTQY 240 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 E +K K ++ G GFGY + + N + Sbjct: 241 IETLRKHKARHQDKGNGFGYEII-PDDGIANAIV 273 >gi|219870523|ref|YP_002474898.1| Type II modification methyltransferase HpaII/DNA (cytosine-5-)-methyltransferase [Haemophilus parasuis SH0165] gi|219690727|gb|ACL31950.1| Type II modification methyltransferase HpaII/DNA (cytosine-5-)-methyltransferase [Haemophilus parasuis SH0165] Length = 350 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDD-KSTISNKL 57 + A DFGVPQ RER++I+ F F +P PL K D+ E+++ K +S + Sbjct: 170 LNAKDFGVPQNRERIFIVGFRQDLAINSFYYPAPLNRKVCFNDVKEKNVVPTKYYLSTQY 229 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 E +K K ++ G GFGY + + N + Sbjct: 230 IETLRKHKARHQDKGNGFGYEII-PDDGIANAIV 262 >gi|254282099|ref|ZP_04957067.1| modification methylase SsoII [gamma proteobacterium NOR51-B] gi|219678302|gb|EED34651.1| modification methylase SsoII [gamma proteobacterium NOR51-B] Length = 356 Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 5/97 (5%) Query: 8 VPQRRERLYIIDFLNPS----VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQK 63 V QRR R +++ N F+FP L +L + D K T+S+K+W GH+ Sbjct: 192 VAQRRVRCFMVAVRNDIAANRGAFEFPKFPEGSIPLRSVLSKEPDPKYTLSDKMWAGHKA 251 Query: 64 RKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSE 100 R N G GF L +NT+ ARY KD E Sbjct: 252 RTIRNVERGTGF-TALEANLDKPSNTIVARYGKDAKE 287 >gi|127459|sp|P15446|MTH2_HAEPA RecName: Full=Modification methylase HpaII; Short=M.HpaII; AltName: Full=Cytosine-specific methyltransferase HpaII gi|43630|emb|CAA35705.1| unnamed protein product [Haemophilus parainfluenzae] gi|305377|gb|AAA20481.1| HpaII modification methyltransferase [Haemophilus parainfluenzae] Length = 358 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 4/93 (4%) Query: 2 KACDFGVPQRRERLYIIDFLN--PSVEFKFPTPLGIKPRLGDI-LEEHIDDKSTISNKLW 58 A +FGVPQ RER+YI+ F F +P PL DI E+ + K +S + Sbjct: 177 NAKNFGVPQNRERIYIVGFHKSTGVNSFSYPEPLDKIVTFADIREEKTVPTKYYLSTQYI 236 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + +K KE ++ G GFGY + + N + Sbjct: 237 DTLRKHKERHESKGNGFGYEII-PDDGIANAIV 268 >gi|149369548|ref|ZP_01889400.1| C-5 cytosine-specific DNA-methylase [unidentified eubacterium SCB49] gi|149356975|gb|EDM45530.1| C-5 cytosine-specific DNA-methylase [unidentified eubacterium SCB49] Length = 421 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 4/96 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILE-EHIDDKSTISNKL 57 + A FGVPQ RER++I+ F FK+P P + L +ILE E + K +S Sbjct: 241 LNAKKFGVPQNRERIFIVGFRKDLGINNFKYPEPTDTEAILENILEAEEVSVKYYLSEVY 300 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + + ++ G GFGY + N+ T N + Sbjct: 301 LQTLRNHRARHESKGNGFGYEII-PNNGTANAVVCG 335 >gi|282859944|ref|ZP_06269032.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010] gi|282587347|gb|EFB92564.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010] Length = 448 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 4/94 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILE-EHIDDKSTISNKL 57 + A +FGVPQ RER+YI+ F F +P P DI E + K +S Sbjct: 258 LNAANFGVPQHRERVYIVGFRKDLNIKAFNYPMPTDNSKTFADIKEATTVSSKYYLSTTY 317 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + K + G GFGY + ++ N + Sbjct: 318 LDTLIAHKARHAAKGHGFGYEIIS-DTGIANAIV 350 >gi|326798326|ref|YP_004316145.1| DNA-cytosine methyltransferase [Sphingobacterium sp. 21] gi|326549090|gb|ADZ77475.1| DNA-cytosine methyltransferase [Sphingobacterium sp. 21] Length = 409 Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 4/95 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDIL-EEHIDDKSTISNKLW 58 A +FGVPQ RER++I+ + F++P PL + DI EE + K +S + Sbjct: 230 NAKNFGVPQNRERIFIVGYRKDLGIDRFEYPEPLDEPVAIEDIFEEEEVSVKYYLSTQYL 289 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + ++ K ++ G GFG+ + N N + Sbjct: 290 KTLKEHKARHESKGNGFGFEII-PNDGIANAVVCG 323 >gi|150026305|ref|YP_001297131.1| Type II modification methyltransferase HpaII [Flavobacterium psychrophilum JIP02/86] gi|149772846|emb|CAL44330.1| Type II modification methyltransferase HpaII [Flavobacterium psychrophilum JIP02/86] Length = 425 Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 4/93 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDD-KSTISNKLW 58 A +FGVPQ RER+YI+ F F++P PL P + E+ + K +S + Sbjct: 240 NAKNFGVPQNRERIYIVGFRQDLNISSFEYPEPLENNPTFESVKEKLVPPTKYYLSTQYV 299 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + K + G GFGY + ++ N + Sbjct: 300 QTLINHKARHASKGNGFGYAII-PDNGIANAIV 331 >gi|313892290|ref|ZP_07825883.1| modification methylase HpaII [Dialister microaerophilus UPII 345-E] gi|313119428|gb|EFR42627.1| modification methylase HpaII [Dialister microaerophilus UPII 345-E] Length = 329 Score = 83.5 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 4/96 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDIL-EEHIDDKSTISNKL 57 + + +FGVPQ RER+YI+ F N F FP + L DI+ +E + + +S Sbjct: 147 LNSKNFGVPQNRERIYIVAFRNDISPENFDFPEGTDTEKTLKDIIEKEEVSSRYYLSETY 206 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 K KE K G GFGY + + + + Sbjct: 207 LNSLIKHKERQKAKGNGFGYEI-RQMDSVAGAIVCG 241 >gi|169334482|ref|ZP_02861675.1| hypothetical protein ANASTE_00885 [Anaerofustis stercorihominis DSM 17244] gi|169259199|gb|EDS73165.1| hypothetical protein ANASTE_00885 [Anaerofustis stercorihominis DSM 17244] Length = 337 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 3/84 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDILEE-HIDDKSTISNKL 57 + + +FGVPQ RER+YI+ F N +F FPTP+ ++ DI+EE + K +S+ Sbjct: 156 LNSRNFGVPQNRERIYIVAFRNDIAPKDFIFPTPIDENKKIKDIMEEKPVSPKYYLSDVY 215 Query: 58 WEGHQKRKENNKIAGKGFGYGLFF 81 E +K K ++ G GFGY + Sbjct: 216 LETLRKHKARHEAKGNGFGYEIRD 239 >gi|327403407|ref|YP_004344245.1| DNA-cytosine methyltransferase [Fluviicola taffensis DSM 16823] gi|327318915|gb|AEA43407.1| DNA-cytosine methyltransferase [Fluviicola taffensis DSM 16823] Length = 422 Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 4/96 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDI-LEEHIDDKSTISNKL 57 M A +FGVPQ RER++I+ F F++P P+ D+ E+ + K +S Sbjct: 241 MNAKNFGVPQNRERIFIVGFRKDLNIDSFEYPLPVSKSVTFQDVREEKEVSVKYYLSETY 300 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 K KE + G GFG+ + + N + Sbjct: 301 LNTLVKHKERHASKGNGFGFEII-PDDGIANAVVCG 335 >gi|290969050|ref|ZP_06560585.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1 str. 28L] gi|290781006|gb|EFD93599.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1 str. 28L] Length = 333 Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 4/96 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDILEE-HIDDKSTISNKL 57 + + DFGVPQ RER+YI+ F F+FP + DI+EE K +S+ Sbjct: 147 LNSKDFGVPQNRERIYIVAFREDIAPNTFRFPEKTDDTKVIADIMEEKEPSSKYYLSDVY 206 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 +K K+ ++ G GFGY + + + Sbjct: 207 LASLRKHKQRHQAKGNGFGYEI-RGVHSVAGAIVCG 241 >gi|313674544|ref|YP_004052540.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] gi|312941242|gb|ADR20432.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] Length = 420 Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 4/91 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDI-LEEHIDDKSTISNKL 57 + A D+GVPQ+RER++I+ F F++P P D+ EE + K +SN Sbjct: 242 INAKDYGVPQKRERIFIVGFRKDLKIETFEYPEPSKSPVSFEDVKEEEPVSVKYYLSNTY 301 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTN 88 +K K + G GFGY + + N Sbjct: 302 LNTLKKHKARHLGKGNGFGYAVI-ADDEIAN 331 >gi|170757755|ref|YP_001781752.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str. Okra] gi|169122967|gb|ACA46803.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str. Okra] Length = 561 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 8/95 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A D+G+PQ RER++I+ F FP RL D LE +D+K IS K Sbjct: 149 LNAKDYGIPQNRERVFIVSIRKDIDTGIFSFPKGFDNGLRLKDFLENEVDEKYYISEKAT 208 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 +G + + + ++S + TL R Sbjct: 209 QGL------LRALKRPHTPKMLNKDSEYSPTLDTR 237 >gi|291530358|emb|CBK95943.1| DNA-methyltransferase (dcm) [Eubacterium siraeum 70/3] Length = 696 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 3/82 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDI-LEEHIDDKSTISNKL 57 + + +FGVPQ RER+YI+ F N F FP L DI + K +S+ Sbjct: 154 LNSKNFGVPQNRERIYIVAFRNDIAPDNFDFPESTDTNKCLLDIRERNPVPAKYYLSDVY 213 Query: 58 WEGHQKRKENNKIAGKGFGYGL 79 + +K K ++ G GFGY + Sbjct: 214 VDTLRKHKARHEAKGNGFGYEI 235 >gi|218900598|ref|YP_002449009.1| modification methylase HaeIII [Bacillus cereus G9842] gi|218544695|gb|ACK97089.1| modification methylase HaeIII [Bacillus cereus G9842] Length = 313 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 12/113 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLGIKPRLGDILEEHIDDKSTIS----- 54 + A D+GVPQ R+R++I+ + +PTP + D+ + K Sbjct: 145 LNAADYGVPQTRQRVFIVGVRKDLDLTYSYPTPTHEESPTFDLFNLNALQKWVTIGEALS 204 Query: 55 -----NKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR-YYKDGSEI 101 ++ ++ G+ + + + T++AR K G+ I Sbjct: 205 DIPEPDEAHNLLNHVYSQYRLKFNGYIGHRVTDPNKPSPTITARGDNKGGAVI 257 >gi|10954474|ref|NP_039765.1| DNA cytosine-5 methylase subunit A [Methanothermobacter thermautotrophicus] gi|266583|sp|P29567|MTHT_METTF RecName: Full=Modification methylase MthTI; Short=M.MthTI; AltName: Full=Cytosine-specific methyltransferase MthTI gi|44641|emb|CAA48436.1| TIM [Methanothermobacter thermautotrophicus] gi|149743|gb|AAA73370.1| TIM [Methanothermobacter thermautotrophicus] Length = 330 Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 18/96 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ R+R++I+ + +++F+FP PL K L D + + + K Sbjct: 144 LNAKDYGVPQDRKRVFIVGYREDLNLKFEFPKPLNKKVTLRDAIGDLPEPKP-------- 195 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSAT-TNTLSARY 94 + G L N T T S+RY Sbjct: 196 --------ALEKNRSNGENLEVPNHEYMTGTFSSRY 223 >gi|167751356|ref|ZP_02423483.1| hypothetical protein EUBSIR_02342 [Eubacterium siraeum DSM 15702] gi|167655602|gb|EDR99731.1| hypothetical protein EUBSIR_02342 [Eubacterium siraeum DSM 15702] Length = 475 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 4/96 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDIL-EEHIDDKSTISNKL 57 + + +FGVPQ RER+YI+ F N +F+FP R+ DI+ E + K +S+ Sbjct: 294 LNSKNFGVPQNRERIYIVAFRNDIAPEKFEFPQGNDDTKRIKDIIEENPVPAKYYLSDVY 353 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 E ++ K ++ G GFGY + Sbjct: 354 LETLRRHKARHESKGNGFGYE-VRGMEDIAGAIVCG 388 >gi|154484133|ref|ZP_02026581.1| hypothetical protein EUBVEN_01844 [Eubacterium ventriosum ATCC 27560] gi|149735175|gb|EDM51061.1| hypothetical protein EUBVEN_01844 [Eubacterium ventriosum ATCC 27560] Length = 366 Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDILEEH-IDDKSTISNKL 57 + + DFGVPQ RER+YI+ F S F+FP + DI+EE + K +S Sbjct: 164 LNSKDFGVPQNRERIYIVAFRKDINSENFEFPVGNKPDTCIRDIMEEQEVSVKYYLSTTY 223 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSA 85 E ++ K + G GFGY + + Sbjct: 224 IETLKRHKARHAAKGNGFGYEIRDLDGK 251 >gi|330960632|gb|EGH60892.1| DNA cytosine methylase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 178 Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Query: 33 LGIKPRLGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 +P GD+L++ +D K ++ LW+ + E ++ G GFG+GL N TLSA Sbjct: 15 PKQRPSFGDLLDKEVDSKYILTPNLWDYLYRYAEKHRQKGNGFGFGLTRPND-IARTLSA 73 Query: 93 RYYKDGSEI 101 RY+KDGSEI Sbjct: 74 RYHKDGSEI 82 >gi|292670064|ref|ZP_06603490.1| modification methylase EcoRII [Selenomonas noxia ATCC 43541] gi|292648252|gb|EFF66224.1| modification methylase EcoRII [Selenomonas noxia ATCC 43541] Length = 377 Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 4/96 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLN--PSVEFKFPTPLGIKPRLGDILE-EHIDDKSTISNKL 57 + + DFGVPQ RER+YI+ F N S F FP + DI+E E + K +S Sbjct: 181 LNSKDFGVPQNRERIYIVAFRNDIDSTGFAFPEGHDSNTTIRDIMEAEEVSVKYYLSTVY 240 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 ++ K +++ G GFGY E + Sbjct: 241 LASLRRHKAHHEALGHGFGYE-VRELDGQAGAIVCG 275 >gi|113971536|ref|YP_735329.1| DNA-cytosine methyltransferase [Shewanella sp. MR-4] gi|113886220|gb|ABI40272.1| DNA-cytosine methyltransferase [Shewanella sp. MR-4] Length = 417 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 8/100 (8%) Query: 8 VPQRRERLYIIDFLNPSVE----FKFPTPLGIKPRLGDILEE---HIDDKSTISNKLWEG 60 V QRR R +++ + FKFP G L D LEE + ++ TIS++LWEG Sbjct: 254 VAQRRVRCFMVCVREDVFQEFGAFKFPEFEGEPIPLRDALEELTAELMEEYTISDRLWEG 313 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSE 100 H R + N G GF + + +NT+ ARY KDG E Sbjct: 314 HINRTQRNLDRGTGFTAHVAD-LNRPSNTIVARYGKDGKE 352 >gi|300813374|ref|ZP_07093725.1| Modification methylase HpaII [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512517|gb|EFK39666.1| Modification methylase HpaII [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 347 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 3/87 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDILEE-HIDDKSTISNKL 57 + + DFGVPQ RER+YI+ F +F FP + DI+EE K +S+ Sbjct: 147 INSKDFGVPQNRERIYIVAFREDISPNKFIFPEETDDTKVIADIMEEKETSPKYYLSDVY 206 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENS 84 E +K K+ +K G GFGY + NS Sbjct: 207 LESLRKHKQRHKAKGNGFGYEIRDVNS 233 >gi|56461628|ref|YP_156909.1| DNA cytosine methylase [Idiomarina loihiensis L2TR] gi|56180638|gb|AAV83360.1| DNA cytosine methylase [Idiomarina loihiensis L2TR] Length = 419 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 7/96 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFGVPQ R+R Y++ F F FP P IK +G +LE+ + +IS L + Sbjct: 240 LNASDFGVPQNRKRFYLVAFDGKDCGFSFPQPPMIKADIGTLLEKGA-EGYSISEHLQKT 298 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 + +K++ + TL + Y+K Sbjct: 299 YLFKKDDGRPILIDRNT------KGPMRTLVSSYHK 328 >gi|296114006|ref|YP_003627944.1| DNA-cytosine methyltransferase [Moraxella catarrhalis RH4] gi|295921700|gb|ADG62051.1| DNA-cytosine methyltransferase [Moraxella catarrhalis RH4] Length = 410 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + D+G+PQ RER+++I F N F+FP P+ ++ + D LE++ D K + K + Sbjct: 182 LNSKDYGIPQHRERIFVIGFKNKPKNGFEFPQPIELEYTMQDFLEDYTDSKYFLKEKGIK 241 Query: 60 GHQKRKENNKIAGKGFG 76 K K + G Sbjct: 242 FVTSSKNRQKRYTQING 258 >gi|213053049|ref|ZP_03345927.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 169 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%) Query: 33 LGIKPRLGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTL 90 +P L ++LE ++ K ++ LW+ + + ++ G GFGYG+ + ++ TL Sbjct: 1 PPRRPTLAELLEPVVEAKYILTPVLWKYLYRYAKKHQARGNGFGYGMVYPDNPESVARTL 60 Query: 91 SARYYKDGSEI 101 SARYYKDG+EI Sbjct: 61 SARYYKDGAEI 71 >gi|326573696|gb|EGE23654.1| DNA-cytosine methyltransferase [Moraxella catarrhalis O35E] Length = 408 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + D+G+PQ RER+++I F N F+FP P+ ++ + D LE++ D K + K + Sbjct: 180 LNSKDYGIPQHRERIFVIGFKNKPKNGFEFPQPIELEYTMQDFLEDYTDSKYFLKEKGIK 239 Query: 60 GHQKRKENNKIAGKGFG 76 K K + G Sbjct: 240 FVTSSKNRQKRYTQING 256 >gi|213027601|ref|ZP_03342048.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 176 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%) Query: 33 LGIKPRLGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSA--TTNTL 90 +P L ++LE ++ K ++ LW+ + + ++ G GFGYG+ + ++ TL Sbjct: 8 PPRRPTLAELLEPVVEAKYILTPVLWKYLYRYAKKHQARGNGFGYGMVYPDNPESVARTL 67 Query: 91 SARYYKDGSEI 101 SARYYKDG+EI Sbjct: 68 SARYYKDGAEI 78 >gi|49476998|ref|YP_035184.1| modification methylase HpaII (cytosine-specific methyltransferase HpaII) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328554|gb|AAT59200.1| modification methylase HpaII (Cytosine-specific methyltransferase HpaII) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 373 Score = 77.4 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 14/106 (13%) Query: 1 MKACDFGVPQRRERLYIIDFL--------NPSVEFKFPT---PLGIKPRLGDILEEHIDD 49 + + +FGVPQ R R+YI+ F F P I + D+LE+++ + Sbjct: 164 LNSRNFGVPQNRPRIYIVGFNQRLYRDKIESMPLFTLPKSRSRKKIYDSVRDVLEDNVGE 223 Query: 50 KSTISNKLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 K +S E +K KE G GFGY + + +N L A Sbjct: 224 KYYLSEGYLETLKKHKEAQGKKGNGFGYSIVNLPEIENPVSNALLA 269 >gi|2599488|gb|AAB84141.1| FauI DNA methyltransferase [Flavobacterium aquatile] Length = 343 Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 4/98 (4%) Query: 1 MKACDFGVPQRRERLYIIDFL--NPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + + +FGVPQ+RER++I+ F + + FKFP P+ ++ I+ + + DK + + W Sbjct: 165 LNSSEFGVPQKRERVFIVGFRDFDDYLNFKFPQPITLEGSK--IVLKEVIDKKADTEEKW 222 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 QK + + G + + NT+S+ K Sbjct: 223 FFSQKAVDGMLRVREKMNKGRVQDLNQPCNTISSHLAK 260 >gi|238917714|ref|YP_002931231.1| DNA (cytosine-5-)-methyltransferase [Eubacterium eligens ATCC 27750] gi|238873074|gb|ACR72784.1| DNA (cytosine-5-)-methyltransferase [Eubacterium eligens ATCC 27750] Length = 311 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 35/58 (60%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + + D+GVPQ R R YI+ F N + F+FP + L D+LE +DDK +S+++ Sbjct: 148 LNSADYGVPQTRNRTYIVCFDNQNARFEFPEKKKLNKTLQDLLEPEVDDKYFLSDRIL 205 >gi|157265308|ref|YP_001467867.1| C5 cytosine-specific DNA methylase [Thermus phage P23-45] gi|157265426|ref|YP_001467984.1| C5 cytosine-specific DNA methylase [Thermus phage P74-26] gi|156905203|gb|ABU96847.1| C5 cytosine-specific DNA methylase [Thermus phage P23-45] gi|156905321|gb|ABU96964.1| C5 cytosine-specific DNA methylase [Thermus phage P74-26] Length = 368 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 9/101 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRL--GDILEEHIDDKSTISN-K 56 + A D+GVPQ+RER++I+ + +F FP P P++ L + K I + + Sbjct: 162 LNAADYGVPQKRERVFIVGVRSDLPGDFAFPLPTHANPQVAAKYGLLPWVTAKEAIGDLE 221 Query: 57 LWEGHQKRKENNKIAGKGFGY----GLFFENSATTNTLSAR 93 + + + K F Y + N + T+ AR Sbjct: 222 DEDKLRSLPNHEYTKTKFFPYWNQERILNPN-EPSPTILAR 261 >gi|167747653|ref|ZP_02419780.1| hypothetical protein ANACAC_02374 [Anaerostipes caccae DSM 14662] gi|239625035|ref|ZP_04668066.1| modification methylase Rho11sI [Clostridiales bacterium 1_7_47_FAA] gi|167653015|gb|EDR97144.1| hypothetical protein ANACAC_02374 [Anaerostipes caccae DSM 14662] gi|239521421|gb|EEQ61287.1| modification methylase Rho11sI [Clostridiales bacterium 1_7_47FAA] Length = 504 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLN--PSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A ++G+PQ RER+Y++ + +F FP P+ RL DILE+ +D+K +S+ Sbjct: 158 LNAKNYGIPQNRERVYLVLIKKECDNGKFVFPEPMENGRRLMDILEDEVDEKYYLSDDKV 217 Query: 59 EGHQKRKENNKI 70 + + K Sbjct: 218 QKLITDMKERKA 229 >gi|218900599|ref|YP_002449010.1| modification methylase HaeIII [Bacillus cereus G9842] gi|218543463|gb|ACK95857.1| modification methylase HaeIII [Bacillus cereus G9842] Length = 313 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 14/105 (13%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 D+GVPQ+RER+ I N + E++FP P + D+ ++ + +++ G Sbjct: 143 NLADYGVPQKRERVIFIGVRNDMNFEYEFPMPTHEENPTFDLFNQNALQRWVSISEVLAG 202 Query: 61 HQKRKENNK------------IAGKGFGYGLFFENSATTNTLSAR 93 + E++K G+ + + T+ AR Sbjct: 203 LPEPSEDSKILNHVCSNYKIIENKNFTGHRMINP-DKPSPTILAR 246 >gi|282879499|ref|ZP_06288233.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS 5C-B1] gi|281306646|gb|EFA98672.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS 5C-B1] Length = 438 Score = 74.3 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + + D+G+PQ RER++ I F + V+F FP P+ ++ ++ D LE+++D K + K + Sbjct: 208 LNSKDYGIPQHRERIFCIGF-HTPVKFAFPAPIPLEYKMYDFLEDYVDTKYFLKEKGIKF 266 Query: 61 HQKRKENNKIAGKGFG 76 K + K + G Sbjct: 267 VTSHKNHTKCYTQING 282 >gi|288559284|ref|YP_003422770.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1] gi|288541994|gb|ADC45878.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1] Length = 339 Score = 74.3 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 40/88 (45%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + + D+GVPQ RER++I+ F + FKFP P K + D+LE+++ D Sbjct: 170 LNSKDYGVPQNRERIFIVGFKDNVNTFKFPLPFENKANINDLLEKNVKDHELSGIASDHL 229 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTN 88 + +E K Y +F + Sbjct: 230 KKHYEEFLKNKKVNKNYPIFATEIRPSR 257 >gi|281420730|ref|ZP_06251729.1| DNA (cytosine-5-)-methyltransferase [Prevotella copri DSM 18205] gi|281405022|gb|EFB35702.1| DNA (cytosine-5-)-methyltransferase [Prevotella copri DSM 18205] Length = 432 Score = 73.9 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 17/105 (16%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + +CD+G+PQ RER++ + F +FK+P P+ ++ ++ D LE++ID K + K + Sbjct: 203 LNSCDYGIPQHRERVFCLGFKK-PTDFKYPAPIKLEYKMYDFLEDYIDTKYFLKEKGIKF 261 Query: 61 HQKRK-------------ENNKIAGKGFGYG---LFFENSATTNT 89 K + + F + ++ +S T T Sbjct: 262 VTSHKNREKSYTQINGEVALCQKRNQEFNWHGDFVYHPDSELTPT 306 >gi|146298415|ref|YP_001193006.1| DNA-cytosine methyltransferase [Flavobacterium johnsoniae UW101] gi|146152833|gb|ABQ03687.1| DNA-cytosine methyltransferase [Flavobacterium johnsoniae UW101] Length = 329 Score = 73.9 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 9/101 (8%) Query: 1 MKACDFG-VPQRRERLYIIDF-----LNPSVEFKFPTPLGIKPRLGDIL-EEHIDDK-ST 52 + DFG +P RER++I+ F + EF FP + + D++ +E +D+K Sbjct: 144 LNTKDFGNIPHNRERIFIVAFDKDYIKDDKFEFHFPEKEDLTKSIKDLITKEKVDEKFYY 203 Query: 53 ISNKLWEGHQKRKENNKIAGKGFGYGLFFEN-SATTNTLSA 92 +K + NK F EN S+ TL+A Sbjct: 204 HEDKYMYDMLRESITNKDRIYQFRRQYVRENKSSVCPTLTA 244 >gi|311064356|ref|YP_003971081.1| cytosine methyl transferase Dcm [Bifidobacterium bifidum PRL2010] gi|310866675|gb|ADP36044.1| Dcm Cytosine methyl transferase [Bifidobacterium bifidum PRL2010] Length = 326 Score = 73.5 bits (179), Expect = 8e-12, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 13/103 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIK---------PRLGDILEEHIDDK 50 + A D+GVPQ R+R+ I+ N VEF +P P K + + +++ D Sbjct: 154 LNAADYGVPQTRQRVIIVGVRNDLDVEFTYPQPTNSKEGKNGLPRWISVQEAIKDIPDPD 213 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 ++ + K+ + + + + T+ AR Sbjct: 214 GPDADSVPN---NEYSQYKVKPRNYTGHRITDPDKPSPTILAR 253 >gi|15616070|ref|NP_244375.1| cytosine-specific methyltransferase [Bacillus halodurans C-125] gi|10176132|dbj|BAB07227.1| cytosine-specific methyltransferase [Bacillus halodurans C-125] Length = 326 Score = 73.5 bits (179), Expect = 8e-12, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 13/94 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A D+ VPQ RER+ I+ F N EF FP L + L + + Sbjct: 146 LNAKDYSVPQNRERVIIVGFRNDLGITEFTFPEKHDKIVTLREALADLPEPSPEDICDA- 204 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + + + T+ A Sbjct: 205 ----PYSSRFMSRNRKRNW------DEVSYTIPA 228 >gi|306828113|ref|ZP_07461376.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pyogenes ATCC 10782] gi|304429650|gb|EFM32696.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pyogenes ATCC 10782] Length = 214 Score = 73.5 bits (179), Expect = 8e-12, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 34/62 (54%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+GVPQ RER++ + L + FP + RL D+LEE +D+K +S + Sbjct: 150 LNAKDYGVPQNRERVFCVSILGDHEPYIFPEKQELTIRLKDVLEEDVDEKYYLSEEKTRS 209 Query: 61 HQ 62 + Sbjct: 210 IK 211 >gi|291561285|emb|CBL40084.1| DNA-methyltransferase (dcm) [butyrate-producing bacterium SS3/4] Length = 247 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 4/95 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + + D+GVPQ RER++I+ + F+FP + ++ +GD+L+E + + +S + Sbjct: 153 LNSADYGVPQGRERVFIVSIRKDVDDHSFRFPPVIPLEMCMGDLLDEEVPAEFYLSEEKT 212 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + N+ G G T+ R Sbjct: 213 QSVIRHDSNHPGHIADRGGGRVQPY--CQGTIKTR 245 >gi|16923911|gb|AAL31632.1|AF438204_2 C5 DNA methyltransferase [Positive selection vector pMTet1] Length = 418 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 7/96 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A FG+PQ+R+R Y++ FLN ++ F+FP P I +G++LE + +IS L + Sbjct: 246 LDASHFGIPQKRKRFYLVAFLNQNIHFEFPKPPMISKDIGEVLESDVTG-YSISEHLQKS 304 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 + +K++ K + TL + Y+K Sbjct: 305 YLFKKDDGKPSLIDKNTTGA------VKTLVSTYHK 334 >gi|127464|sp|P11408|MTM1_MORSP RecName: Full=Modification methylase MspI; Short=M.MspI; AltName: Full=Cytosine-specific methyltransferase MspI gi|44539|emb|CAA32393.1| unnamed protein product [Moraxella sp.] Length = 418 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 7/96 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A FG+PQ+R+R Y++ FLN ++ F+FP P I +G++LE + +IS L + Sbjct: 246 LDASHFGIPQKRKRFYLVAFLNQNIHFEFPKPPMISKDIGEVLESDVTG-YSISEHLQKS 304 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 + +K++ K + TL + Y+K Sbjct: 305 YLFKKDDGKPSLIDKNTTGA------VKTLVSTYHK 334 >gi|161869767|ref|YP_001598934.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis 053442] gi|161595320|gb|ABX72980.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis 053442] Length = 411 Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 M + D+G+PQ RER++++ F P + F+FP + ++ + D LE++ D K + K + Sbjct: 184 MNSKDYGIPQHRERIFVVGFHTPPINGFQFPEKIELEHTMQDFLEDYTDSKYFLREKGVK 243 Query: 60 GHQKRKENNKIAGKGFGY 77 K K + G Sbjct: 244 FVTSSKNRQKRYTQINGE 261 >gi|313668701|ref|YP_004048985.1| modification methylase [Neisseria lactamica ST-640] gi|313006163|emb|CBN87625.1| putative modification methylase [Neisseria lactamica 020-06] Length = 372 Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 M + D+G+PQ RER++++ F P + F+FP + ++ + D LE++ D K + K + Sbjct: 145 MNSKDYGIPQHRERIFVVGFHTPPINGFQFPEKIELEHTMQDFLEDYTDSKYFLREKGVK 204 Query: 60 GHQKRKENNKIAGKGFGY 77 K K + G Sbjct: 205 FVTSSKNRQKRYTQINGE 222 >gi|304387865|ref|ZP_07370039.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] gi|254670653|emb|CBA06706.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis alpha153] gi|254672637|emb|CBA06420.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis alpha275] gi|261392815|emb|CAX50396.1| putative type II restriction-modification system enzyme Mod [Neisseria meningitidis 8013] gi|304338130|gb|EFM04266.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] gi|319410190|emb|CBY90526.1| putative type II restriction-modification system enzyme Mod [Neisseria meningitidis WUE 2594] gi|325134031|gb|EGC56686.1| DNA-cytosine methyltransferase [Neisseria meningitidis M13399] gi|325203903|gb|ADY99356.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240355] Length = 411 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 M + D+G+PQ RER++++ F P + F+FP + ++ + D LE++ D K + K + Sbjct: 184 MNSKDYGIPQHRERIFVVGFHTPPINGFQFPEKIELEHTMQDFLEDYTDSKYFLREKGVK 243 Query: 60 GHQKRKENNKIAGKGFGY 77 K K + G Sbjct: 244 FVTSSKNRQKRYTQINGE 261 >gi|325127899|gb|EGC50802.1| DNA-cytosine methyltransferase [Neisseria meningitidis N1568] Length = 411 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 M + D+G+PQ RER++++ F P + F+FP + ++ + D LE++ D K + K + Sbjct: 184 MNSKDYGIPQHRERIFVVGFHTPPINGFQFPEKIELEHTMQDFLEDYTDSKYFLREKGVK 243 Query: 60 GHQKRKENNKIAGKGFGY 77 K K + G Sbjct: 244 FVTSSKNRQKRYTQINGE 261 >gi|121634611|ref|YP_974856.1| putative modification methylase [Neisseria meningitidis FAM18] gi|4887086|gb|AAD32180.1|AF125564_2 putative site specific DNA methyltransferase [Neisseria meningitidis] gi|120866317|emb|CAM10058.1| putative modification methylase [Neisseria meningitidis FAM18] gi|325132026|gb|EGC54724.1| DNA-cytosine methyltransferase [Neisseria meningitidis M6190] gi|325135954|gb|EGC58564.1| DNA-cytosine methyltransferase [Neisseria meningitidis M0579] gi|325137780|gb|EGC60355.1| DNA-cytosine methyltransferase [Neisseria meningitidis ES14902] gi|325142075|gb|EGC64502.1| DNA-cytosine methyltransferase [Neisseria meningitidis 961-5945] gi|325198036|gb|ADY93492.1| DNA-cytosine methyltransferase [Neisseria meningitidis G2136] gi|325202381|gb|ADY97835.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240149] gi|325207867|gb|ADZ03319.1| DNA-cytosine methyltransferase [Neisseria meningitidis NZ-05/33] Length = 411 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 M + D+G+PQ RER++++ F P + F+FP + ++ + D LE++ D K + K + Sbjct: 184 MNSKDYGIPQHRERIFVVGFHTPPINGFQFPEKIELEHTMQDFLEDYTDSKYFLREKGVK 243 Query: 60 GHQKRKENNKIAGKGFGY 77 K K + G Sbjct: 244 FVTSSKNRQKRYTQINGE 261 >gi|167746073|ref|ZP_02418200.1| hypothetical protein ANACAC_00768 [Anaerostipes caccae DSM 14662] gi|167654588|gb|EDR98717.1| hypothetical protein ANACAC_00768 [Anaerostipes caccae DSM 14662] Length = 312 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 34/58 (58%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + D+G+PQ R R YI+ F N + EF+FP + L D+LE +DDK +S ++ Sbjct: 148 LNTADYGIPQTRNRTYIVCFANDNAEFEFPDKQELNLTLQDLLETEVDDKYFLSERIL 205 >gi|323650448|gb|ADX97301.1| M.Fnu4HI [Fusobacterium nucleatum] Length = 351 Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 7/99 (7%) Query: 1 MKACDFG-VPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDIL-EEHIDDKSTISNK 56 + A D+G +PQ RER+YI+ F N F+FP PL + + D+L + +ID+K S + Sbjct: 145 LNAKDYGNIPQNRERIYIVGFKNEEHFKNFEFPFPLELTRNIEDMLEKNNIDEKYYYSKE 204 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + + ++ + + + S TL+A Sbjct: 205 KNKFYDTLEKEITNENTIYQWRRRYVRENKSNVCPTLTA 243 >gi|288576182|ref|ZP_05978340.2| DNA (cytosine-5-)-methyltransferase [Neisseria mucosa ATCC 25996] gi|288566126|gb|EFC87686.1| DNA (cytosine-5-)-methyltransferase [Neisseria mucosa ATCC 25996] Length = 406 Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 M + D+G+PQ RER++++ F P F+FP + ++ + D LE++ D K + K + Sbjct: 179 MNSKDYGIPQHRERIFVVGFHTPPTNGFQFPEKIELEHTMQDFLEDYTDSKYFLREKGVK 238 Query: 60 GHQKRKENNKIAGKGFGY 77 K K + G Sbjct: 239 FVTSSKNRQKRYTQINGE 256 >gi|219855710|ref|YP_002472832.1| hypothetical protein CKR_2367 [Clostridium kluyveri NBRC 12016] gi|219569434|dbj|BAH07418.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 419 Score = 72.0 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 8/98 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 M A +FG+PQRRER+ I+ F +F FP + + EH +IS +L Sbjct: 245 MDAQNFGLPQRRERIVIVGFHPDLGINDFSFPKGNPDNKVPINAILEHNPTGYSISKRLQ 304 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 E + +K++ K F +++ NTL A Y+K Sbjct: 305 ESYLFKKDDGKPQIVDF------DSTIQVNTLVASYHK 336 >gi|256822924|ref|YP_003146887.1| DNA-cytosine methyltransferase [Kangiella koreensis DSM 16069] gi|256796463|gb|ACV27119.1| DNA-cytosine methyltransferase [Kangiella koreensis DSM 16069] Length = 419 Score = 72.0 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 17/107 (15%) Query: 1 MKACDFG-VPQRRERLYIIDFLNP-----------SVEFKFPTPLGIKPRLGDILEEHID 48 + + DFG VPQ RER+YII F + + EF +P P+ + + D+L++ + Sbjct: 239 LNSMDFGDVPQNRERIYIIGFKDEANWQNNKGATRTSEFSWPEPIRLSKSVRDLLDKQVS 298 Query: 49 DKSTISNKLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + + + +++ KE + + + + TL+A Sbjct: 299 EHYFY--ERFACYKQLKEQMTRKDTVYQWRRVYVRENKNNVCPTLTA 343 >gi|269122857|ref|YP_003305434.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM 12112] gi|268314183|gb|ACZ00557.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM 12112] Length = 329 Score = 72.0 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 10/102 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHID--------DK 50 + + DFG+PQ+RER+Y++ F F FP P + + D+L + D Sbjct: 152 LNSLDFGIPQKRERIYMVCFRKDLNIKNFIFPKPFKLSTFVEDLLLPDEEVSNLIINRDD 211 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + +K + + + GKG + TLSA Sbjct: 212 LVLKDKEIKENSNKAIRIGTVGKGGQGERIYSPKGIAITLSA 253 >gi|153955289|ref|YP_001396054.1| DNA methylase [Clostridium kluyveri DSM 555] gi|146348147|gb|EDK34683.1| Predicted DNA methylase [Clostridium kluyveri DSM 555] Length = 416 Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 8/98 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 M A +FG+PQRRER+ I+ F +F FP + + EH +IS +L Sbjct: 242 MDAQNFGLPQRRERIVIVGFHPDLGINDFSFPKGNPDNKVPINAILEHNPTGYSISKRLQ 301 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 E + +K++ K F +++ NTL A Y+K Sbjct: 302 ESYLFKKDDGKPQIVDF------DSTIQVNTLVASYHK 333 >gi|218767941|ref|YP_002342453.1| putative modification methylase [Neisseria meningitidis Z2491] gi|6900408|emb|CAB72018.1| putative cytosine-specific methyltransferase [Neisseria meningitidis] gi|121051949|emb|CAM08255.1| putative modification methylase [Neisseria meningitidis Z2491] Length = 411 Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 M + D+G+PQ RER++++ F P + F+FP + ++ + D LE++ D K + K + Sbjct: 184 MNSKDYGIPQHRERIFVVGFHTPPINGFQFPEKIELEHTMQDFLEDYTDSKYFLREKGAK 243 Query: 60 GHQKRKENNKIAGKGFGY 77 K K + G Sbjct: 244 FVTSSKNRQKRYTQINGE 261 >gi|15676724|ref|NP_273868.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis MC58] gi|7226061|gb|AAF41239.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis MC58] gi|308389005|gb|ADO31325.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis alpha710] gi|316984499|gb|EFV63467.1| modification methylase HpaII [Neisseria meningitidis H44/76] gi|325129944|gb|EGC52743.1| DNA-cytosine methyltransferase [Neisseria meningitidis OX99.30304] gi|325140023|gb|EGC62552.1| DNA-cytosine methyltransferase [Neisseria meningitidis CU385] gi|325206334|gb|ADZ01787.1| DNA-cytosine methyltransferase [Neisseria meningitidis M04-240196] Length = 411 Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 M + D+G+PQ RER++++ F P + F+FP + ++ + D LE++ D K + K + Sbjct: 184 MNSKDYGIPQHRERIFVVGFHTPPINGFQFPEKIELEHTMQDFLEDYTDSKYFLREKGAK 243 Query: 60 GHQKRKENNKIAGKGFGY 77 K K + G Sbjct: 244 FVTSSKNRQKRYTQINGE 261 >gi|254303554|ref|ZP_04970912.1| DNA (cytosine-5-)-methyltransferase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323746|gb|EDK88996.1| DNA (cytosine-5-)-methyltransferase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 492 Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + + D+G+PQ RER++++ F +F+FP P ++ + D L +++ K + K Sbjct: 265 LNSKDYGIPQNRERVFVVGFRKDLKLKKKFEFPRPFLLEKTMQDFLLDNVAGKYYLQEKG 324 Query: 58 WEGHQKRKENNKI 70 + K NK Sbjct: 325 VDFVTLEKNINKR 337 >gi|315608882|ref|ZP_07883855.1| modification methylase EcoRII [Prevotella buccae ATCC 33574] gi|315249409|gb|EFU29425.1| modification methylase EcoRII [Prevotella buccae ATCC 33574] Length = 312 Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 3/70 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI--KPRLGDILEEHIDDKSTISNKLW 58 + A DFG+PQ+RER+ I+ F ++ F FPTP+ I + L DILE +D K + +K+ Sbjct: 147 LNALDFGIPQKRERIIIVGF-KDNILFSFPTPVPISQRKTLKDILEIDVDKKYYVKDKIR 205 Query: 59 EGHQKRKENN 68 E R ++ Sbjct: 206 ESRLMRLKDP 215 >gi|220930232|ref|YP_002507141.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10] gi|220000560|gb|ACL77161.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10] Length = 416 Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 8/98 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 M A +FG+PQRRER+ I+ F +F FP + + EH +IS +L Sbjct: 242 MDAQNFGLPQRRERIVIVGFHPDLGINDFSFPKGNPDNKVPINAILEHNPTGYSISKRLQ 301 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 E + +K++ K F +++ NTL A Y+K Sbjct: 302 ESYLFKKDDGKPQIVDF------DSTIQVNTLVASYHK 333 >gi|325144138|gb|EGC66445.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240013] gi|325200491|gb|ADY95946.1| DNA-cytosine methyltransferase [Neisseria meningitidis H44/76] Length = 406 Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 M + D+G+PQ RER++++ F P + F+FP + ++ + D LE++ D K + K + Sbjct: 179 MNSKDYGIPQHRERIFVVGFHTPPINGFQFPEKIELEHTMQDFLEDYTDSKYFLREKGAK 238 Query: 60 GHQKRKENNKIAGKGFGY 77 K K + G Sbjct: 239 FVTSSKNRQKRYTQINGE 256 >gi|261379604|ref|ZP_05984177.1| modification methylase EcoRII [Neisseria subflava NJ9703] gi|284798084|gb|EFC53431.1| modification methylase EcoRII [Neisseria subflava NJ9703] Length = 320 Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 42/100 (42%), Gaps = 9/100 (9%) Query: 1 MKACDF-GVPQRRERLYIIDFLNPSV----EFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 M ++ +PQ RER++I+ F +F FP + + + DIL++ + + Sbjct: 149 MNTAEYANIPQNRERIFIVAFNKDHNFDTSKFDFPKKIKLTKSIHDILDKEKQEDIYYYD 208 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 K + + KE K + + + + TL+A Sbjct: 209 K-SKYISQLKETIKSKDTIYQWRRVYVRENKNKLCPTLTA 247 >gi|127427|sp|P17044|MTBF_BACSU RecName: Full=Modification methylase BsuFI; Short=M.BsuFI; AltName: Full=Cytosine-specific methyltransferase BsuFI gi|39984|emb|CAA35888.1| unnamed protein product [Bacillus subtilis] Length = 409 Score = 71.2 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 8/98 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 M A +FG+PQRRER+ I+ F +F FP + + EH +IS +L Sbjct: 241 MDAQNFGLPQRRERIVIVGFHPDLGINDFSFPKGNPDNKVPINAILEHNPTGYSISKRLQ 300 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 E + +K++ K F NTL A Y+K Sbjct: 301 ESYLFKKDDGKPQIVDFRCTY------QVNTLVASYHK 332 >gi|125974805|ref|YP_001038715.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC 27405] gi|125715030|gb|ABN53522.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC 27405] Length = 334 Score = 71.2 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 13/93 (13%) Query: 2 KACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 A D+GVPQ R R+ + F +FKFP P K L + + + + K + Sbjct: 156 NAADYGVPQDRWRVILYGFRKDLEVKDFKFPEPFPYKVTLREAIGDMPEPKQSDIC---- 211 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 H + G+ + T+ A Sbjct: 212 -HASYSSRYMSRNRKRGW------DEVSYTIPA 237 >gi|1171044|sp|P43420|MTB6_BACSF RecName: Full=Modification methylase Bsp6I; Short=M.Bsp6I; AltName: Full=Cytosine-specific methyltransferase Bsp6I gi|547481|emb|CAA57293.1| site-specific DNA-methyltransferase (cytosine-specific) [Bacillus sp.] gi|1098125|prf||2115268B methyltransferase Bsp6IM Length = 315 Score = 71.2 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 8/100 (8%) Query: 1 MKACDFG-VPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDI--LEEHIDDKSTISN 55 + A DFG +PQ RER+YI+ F N F FP P + + D+ L + +DD+ + Sbjct: 145 LNAKDFGNIPQNRERIYIVGFRNIEHYKNFNFPMPQPLTLTIKDMINLSDKLDDRFYYTE 204 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + +E + + + S TL+A Sbjct: 205 DKCSFYSPLQEQMTSDETIYQWRRKYVRENKSNVCPTLTA 244 >gi|223937258|ref|ZP_03629164.1| DNA-cytosine methyltransferase [bacterium Ellin514] gi|223894043|gb|EEF60498.1| DNA-cytosine methyltransferase [bacterium Ellin514] Length = 408 Score = 70.8 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 9/68 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER++I+ F + +E+ FP P + + K + WE Sbjct: 186 LNAADYGVPQFRERVFIVGFRHDLGIEWSFPKPTHSY-------DALVKAKWVTGD-YWE 237 Query: 60 GHQKRKEN 67 H+ K++ Sbjct: 238 QHKIAKKH 245 >gi|313678561|ref|YP_004056301.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma bovis PG45] gi|312950401|gb|ADR24996.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma bovis PG45] Length = 315 Score = 70.4 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%) Query: 1 MKACDFG-VPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A D+G +PQ RER+YI+ F + F FP P+ ++ + D LE ++DD S + Sbjct: 145 LNAKDYGDIPQNRERIYIVGFKDKHSHDAFSFPLPVKLRTSINDCLEVNVDDDSFYYSAD 204 Query: 58 WEGHQKRKENNKIAGKG-FGYGLFF---ENSATTNTLSA 92 + + + + + TL+A Sbjct: 205 KNVFYSKLAIEIKNSNSIYQWRRKYVRENKNGVCPTLTA 243 >gi|309789605|ref|ZP_07684186.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides DG6] gi|308228341|gb|EFO81988.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides DG6] Length = 342 Score = 70.4 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 10/96 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A +GVPQ RERL ++ F FP PL K +G+ L E + + + Sbjct: 157 LNAVHYGVPQNRERLIVVGHKGG---FSFPKPLSTKVTVGEALGEMVHS----TPPESKF 209 Query: 61 HQKRKENNKIAGKGFGYGLFFEN---SATTNTLSAR 93 + + Y + + TL+ R Sbjct: 210 LTPSMDAYVAKYERASYCKVPRDLHLDKPSRTLTCR 245 >gi|48243617|gb|AAT40769.1| putative DNA methylase [Haemophilus influenzae] Length = 293 Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 36/101 (35%), Gaps = 9/101 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTIS----- 54 + A D+GVPQ R+R+ I+ ++F+FP D L+ + K IS Sbjct: 146 LNAADYGVPQTRQRVIIVGIRKDLDIQFEFPKQTHS-KNGNDGLKRWVSIKEAISHLPDP 204 Query: 55 --NKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 K+ + F + T+ AR Sbjct: 205 DGENADSVPNNEYSQYKVITRDFTGHRKTSADLPSPTILAR 245 >gi|296126993|ref|YP_003634245.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563] gi|296018809|gb|ADG72046.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563] Length = 324 Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 15/112 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDIL----EEHIDDKSTIS 54 + A D+G+PQ+RER+YI+ F +F FP P+ + L D L + + + Sbjct: 152 LNASDYGIPQKRERIYIVCFRKDLNIKKFDFPKPIELIKHLEDFLLEENQIPNEAYINRN 211 Query: 55 NKLWEGHQK-----RKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 + + + + I KG + + TLSA DG I Sbjct: 212 DIIMNYIKDDKYSKKSIRLGIINKGGQGERIYSIKGSAITLSA----DGGGI 259 >gi|302671270|ref|YP_003831230.1| DNA-cytosine methyltransferase [Butyrivibrio proteoclasticus B316] gi|302395743|gb|ADL34648.1| DNA-cytosine methyltransferase [Butyrivibrio proteoclasticus B316] Length = 579 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A D+GVPQ RERL+++ F N VEF FP + ++ ++ D L ++ + K Sbjct: 354 LNARDYGVPQNRERLFVVGFRNDLDLDVEFSFPQAIELEKKMQDFLLDNAPGGYFLPEKG 413 Query: 58 WEGHQKRKENNKI 70 + K +K Sbjct: 414 VDFVTSEKNLSKR 426 >gi|118138268|pdb|2I9K|A Chain A, Engineered Extrahelical Base Destabilization Enhances Sequence Discrimination Of Dna Methyltransferase M.Hhai Length = 327 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKL- 57 + A D+G+PQ+RER+Y+I F N F+FP P + + D+L + + + ++ Sbjct: 152 LNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKD 211 Query: 58 -------WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 E + I GKG + TLSA Sbjct: 212 LVMTNQEIEQTTPKTVRLGIVGKGGQGERIYSTRGIAITLSA 253 >gi|325269501|ref|ZP_08136117.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM 16608] gi|324988120|gb|EGC20087.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM 16608] Length = 388 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G+PQ RERLY + F + +FK+P P+ ++ ++ D LE++ + + +K + Sbjct: 180 LNARDYGIPQTRERLYCVGFKKKT-KFKYPAPIPLRYKMYDFLEDYTNSEYFEKDKGVKV 238 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYY 95 +E+ + G F + + +YY Sbjct: 239 LTSNEEHRQAIIGGSASERFNDFIFPVREIDDKYY 273 >gi|170719133|ref|YP_001784281.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] gi|168827262|gb|ACA32633.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] Length = 408 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%) Query: 1 MKACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 M + ++G+PQ RER++++ F +P F+FPT + ++ + D LE++ D K + K + Sbjct: 180 MNSKNYGIPQHRERIFVVGFKTSPKGGFQFPTKIPLERTMQDFLEDYTDSKYFLKEKGIK 239 Query: 60 GHQKRKENNKIAGKGFG 76 K K + G Sbjct: 240 FVTSSKNRQKRYTQING 256 >gi|319956919|ref|YP_004168182.1| DNA-cytosine methyltransferase [Nitratifractor salsuginis DSM 16511] gi|319419323|gb|ADV46433.1| DNA-cytosine methyltransferase [Nitratifractor salsuginis DSM 16511] Length = 394 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + +G+PQ RER +++ F + + F+FP + +K L D+LE +D+K +++K Sbjct: 145 LNTKHYGLPQNRERYFLVGFKSKTAGERFRFPKKVPLKLILSDVLENKVDEKYYLTDKAL 204 Query: 59 EGH 61 E Sbjct: 205 EYM 207 >gi|289167787|ref|YP_003446056.1| site-specific DNA methylase [Streptococcus mitis B6] gi|288907354|emb|CBJ22191.1| site-specific DNA methylase [Streptococcus mitis B6] Length = 346 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 10/99 (10%) Query: 3 ACDFGVPQRRERLYIIDFLNP-SVEFKFPTPL----GIKPRLGDILEEHIDDKSTISNKL 57 A +GVPQ+RER++I+ + F+FP L IL++ ID+K S + Sbjct: 161 ATKYGVPQKRERVFIVGIRKDLNFTFEFPEEPIQNVEDYTPLKVILQQDIDEKYYFSERA 220 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 +G K K+ G + +NT+S+ K Sbjct: 221 VQGMLNSKSGKKMNK-----GRAQDIEQPSNTVSSHLAK 254 >gi|160877870|pdb|2Z6U|A Chain A, Ternary Structure Of The Glu119ala M.Hhai, C5-Cytosine Dna Methyltransferase, With Unmodified Dna And Adohcy Length = 327 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKL- 57 + A D+G+PQ+RER+Y+I F N F+FP P + + D+L + + + ++ Sbjct: 152 LNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKD 211 Query: 58 -------WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 E + I GKG + TLSA Sbjct: 212 LVMTNQEIEQTTPKTVRLGIVGKGGQGERIYSTRGIAITLSA 253 >gi|220929948|ref|YP_002506857.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10] gi|220000276|gb|ACL76877.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10] Length = 338 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 11/103 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDKST----IS 54 + A ++G+PQ RER+Y++ F N F FP P +K + D L E Sbjct: 152 LNAVNYGIPQNRERIYMVCFRNDLNIENFNFPKPFPLKRYVEDFLLEDESQVEHLYIQRP 211 Query: 55 NKLWEGHQKRKENNKIA-----GKGFGYGLFFENSATTNTLSA 92 + + G + K +NK KG + TLSA Sbjct: 212 DTYFNGVEDNKYSNKPIRLGIVNKGGQGERIYSTKGIAITLSA 254 >gi|312281368|ref|YP_004022731.1| DNA-cytosine methyltransferase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181897|gb|ADQ42066.1| DNA-cytosine methyltransferase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 319 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 6/98 (6%) Query: 1 MKACDFG-VPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDIL--EEHIDDKSTISN 55 + + ++G VPQ RER+YI+ FL+ FKFP P+ + + DI+ E D+K Sbjct: 146 LNSLEYGNVPQNRERVYIVGFLDKSMYEAFKFPEPVSLTVTIHDIIKPWEKKDEKYYYRE 205 Query: 56 -KLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 K +E ++ ++ + + TL+A Sbjct: 206 GKYYELLKQNVDDPNTVYQIRRIYVRKNKKGVCPTLTA 243 >gi|161761159|pdb|2ZCJ|A Chain A, Ternary Structure Of The Glu119gln M.Hhai, C5-Cytosine Dna Methyltransferase, With Unmodified Dna And Adohcy Length = 327 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKL- 57 + A D+G+PQ+RER+Y+I F N F+FP P + + D+L + + + ++ Sbjct: 152 LNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKD 211 Query: 58 -------WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 E + I GKG + TLSA Sbjct: 212 LVMTNQEIEQTTPKTVRLGIVGKGGQGERIYSTRGIAITLSA 253 >gi|462658|sp|P34878|MTSB_LACLC RecName: Full=Modification methylase ScrFIB; Short=M.ScrFI-B; Short=M.ScrFIB; AltName: Full=Cytosine-specific methyltransferase ScrFIB gi|149495|gb|AAA16838.1| methyl-5-cytosine methylase [Lactococcus lactis] gi|2327032|gb|AAB66694.1| 5-methyl-cytosine-methyltransferase [Lactococcus lactis subsp. cremoris] gi|739995|prf||2004282A methyl-5-cytosine methyltransferase Length = 360 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 35/56 (62%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A DFG+PQ RER++ I LNP+ +F FP + + D+LEE++ +K + N Sbjct: 201 LNARDFGIPQNRERVFCISILNPNEDFTFPQKQNLTLSMNDLLEENVSEKFYLKNN 256 >gi|127455|sp|P05102|MTH1_HAEPH RecName: Full=Modification methylase HhaI; Short=M.HhaI; AltName: Full=Cytosine-specific methyltransferase HhaI gi|1065144|pdb|1MHT|A Chain A, Covalent Ternary Structure Of Hhai Methyltransferase, Dna And S-Adenosyl-L-Homocysteine gi|1942412|pdb|3MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With Unmodified Dna And Adohcy gi|1942415|pdb|4MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With Native Dna And Adohcy gi|2392799|pdb|5MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With Hemimethylated Dna And Adohcy gi|3660437|pdb|6MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With Adohcy And Dna Containing 4'-Thio-2'deoxycytidine At The Target gi|4139672|pdb|7MHT|A Chain A, Cytosine-Specific Methyltransferase HhaiDNA COMPLEX gi|4139675|pdb|8MHT|A Chain A, Cytosine-Specific Methyltransferase HhaiDNA COMPLEX gi|4139680|pdb|9MHT|A Chain A, Cytosine-Specific Methyltransferase HhaiDNA COMPLEX gi|4558252|pdb|10MH|A Chain A, Ternary Structure Of Hhai Methyltransferase With Adohcy And Hemimethylated Dna Containing 5,6-Dihydro-5-Azacytosine At The Target gi|4699814|pdb|2HMY|B Chain B, Binary Complex Of Hhai Methyltransferase With Adomet Formed In The Presence Of A Short Nonpsecific Dna Oligonucleotide gi|24158912|pdb|1M0E|A Chain A, Zebularine: A Novel Dna Methylation Inhibitor That Forms A Covalent Complex With Dna Methyltransferase gi|52695513|pdb|1SKM|A Chain A, Hhai Methyltransferase In Complex With Dna Containing An Abasic South Carbocyclic Sugar At Its Target Site gi|85544385|pdb|2C7O|A Chain A, Hhai Dna Methyltransferase Complex With 13mer Oligonucleotide Containing 2-Aminopurine Adjacent To The Target Base (Pcgc:gmgc) And Sah gi|85544388|pdb|2C7P|A Chain A, Hhai Dna Methyltransferase Complex With Oligonucleotide Containing 2-Aminopurine Opposite To The Target Base ( Gcgc:gmpc) And Sah gi|85544391|pdb|2C7Q|A Chain A, Hhai Dna Methyltransferase Complex With Oligonucleotide Containing 2-Aminopurine Outside The Recognition Sequence (Paired With G) And Sah gi|116667789|pdb|2HR1|A Chain A, Ternary Structure Of Wt M.Hhai C5-Cytosine Dna Methyltransferase With Unmodified Dna And Adohcy gi|157831356|pdb|1HMY|A Chain A, Crystal Structure Of The Hhal Dna Methyltransferase Complexed With S-Adenosyl-L-Methionine gi|290560089|pdb|3EEO|A Chain A, M. Hhai Co-Crystallized With Synthetic Dsdna Containing A Propane Diol In Place Of The Deoxycytidine Residue Targeted For Methylation. gi|148949|gb|AAA24989.1| DNA methylase [Haemophilus haemolyticus] Length = 327 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKL- 57 + A D+G+PQ+RER+Y+I F N F+FP P + + D+L + + + ++ Sbjct: 152 LNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKD 211 Query: 58 -------WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 E + I GKG + TLSA Sbjct: 212 LVMTNQEIEQTTPKTVRLGIVGKGGQGERIYSTRGIAITLSA 253 >gi|148988377|ref|ZP_01819824.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae SP6-BS73] gi|147926058|gb|EDK77132.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae SP6-BS73] Length = 343 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 10/99 (10%) Query: 3 ACDFGVPQRRERLYIIDFLNP-SVEFKFPTPL----GIKPRLGDILEEHIDDKSTISNKL 57 A +GVPQ+RER++I+ + F+FP L IL++ ID+K S + Sbjct: 161 ATKYGVPQKRERVFIVGIRKDLNFTFEFPEEPIQNVEDYTPLKVILQQDIDEKYYFSERA 220 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 +G K K+ G + +NT+S+ K Sbjct: 221 VQGMLNSKSGKKMNK-----GRAQDIEQPSNTVSSHLAK 254 >gi|159026805|emb|CAO86650.1| ngoBIM [Microcystis aeruginosa PCC 7806] Length = 331 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A +FG+PQ+RER++I+ F + F +P P + L +ILEE++ D S K+ + Sbjct: 156 LNALNFGLPQKRERIFIVGFR-EARGFIWPKPALSRTSLTEILEENVSDFYYASEKIQKS 214 Query: 61 HQKRKENNKIAGKGFGYG 78 ++E K + + Sbjct: 215 RLLKREGKKPYSEPTIWH 232 >gi|254443346|ref|ZP_05056822.1| C-5 cytosine-specific DNA methylase superfamily [Verrucomicrobiae bacterium DG1235] gi|198257654|gb|EDY81962.1| C-5 cytosine-specific DNA methylase superfamily [Verrucomicrobiae bacterium DG1235] Length = 349 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 3/87 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLN--PSVEFKFPTPLGIKPRLGDILEEHID-DKSTISNKL 57 +KA DFG+ Q+RER++I+ F F +P + ++ DILE + ++ K Sbjct: 176 LKASDFGLAQKRERVFIVGFRKSLGVEGFSYPEKGNDRSKISDILEPSHSVGQWLLTKKS 235 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENS 84 + K+AG G GY + EN Sbjct: 236 LACLRDHSSKQKLAGNGHGYAILDENE 262 >gi|159795737|pdb|2Z6A|A Chain A, S-Adenosyl-L-Methionine-Dependent Methyl Transfer: Observable Precatalytic Intermediates During Dna Cytosine Methylation Length = 327 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKL- 57 + A D+G+PQ+RER+Y+I F N F+FP P + + D+L + + + ++ Sbjct: 152 LNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKD 211 Query: 58 -------WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 E + I GKG + TLSA Sbjct: 212 LVMTNQEIEQTTPKTVRLGIVGKGGQGERIYSTRGIAITLSA 253 >gi|189096062|pdb|2UYH|A Chain A, Hhai Dna Methyltransferase S87q-Q237s Mutant Complex With 13mer Gcgc-Gmgc Oligonucleotide And Sah Length = 327 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKL- 57 + A D+G+PQ+RER+Y+I F N F+FP P + + D+L + + + ++ Sbjct: 152 LNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKD 211 Query: 58 -------WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 E + I GKG + TLSA Sbjct: 212 LVMTNQEIEQTTPKTVRLGIVGKGGSGERIYSTRGIAITLSA 253 >gi|296114087|ref|YP_003628025.1| cytosine-specific methyltransferase [Moraxella catarrhalis RH4] gi|295921781|gb|ADG62132.1| cytosine-specific methyltransferase [Moraxella catarrhalis RH4] gi|326560672|gb|EGE11040.1| cytosine-specific methyltransferase [Moraxella catarrhalis 46P47B1] Length = 318 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 8/99 (8%) Query: 1 MKACDF-GVPQRRERLYIIDFLN---PSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 M ++ +PQ RER++II F S+ F+FP + + + DIL+ D+S Sbjct: 147 MNTSEYANIPQNRERIFIIAFDKNIFKSINFEFPNKIPLTKTIHDILDNKKQDESFYY-H 205 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + HQK K + + + + TL+A Sbjct: 206 KSKYHQKLKLEMQNKDTIYQWRRVYVRENKHGLCPTLTA 244 >gi|327463103|gb|EGF09424.1| modification methylase ScrFIA [Streptococcus sanguinis SK1] Length = 346 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 10/99 (10%) Query: 3 ACDFGVPQRRERLYIIDFLNP-SVEFKFPTPL----GIKPRLGDILEEHIDDKSTISNKL 57 A +GVPQ+RER++I+ + F+FP L IL+++ID+K S + Sbjct: 161 ATKYGVPQKRERVFIVGIRKDLNFTFEFPEEPIQNEEDYTPLKAILQKNIDEKYYFSERA 220 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 +G K K+ G + +NT+S+ K Sbjct: 221 VKGMLNSKSGKKMNK-----GRAQDIERPSNTVSSHLAK 254 >gi|5420107|emb|CAB46561.1| cytosine-specific methyltransferase [Streptococcus thermophilus] Length = 316 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 8/100 (8%) Query: 1 MKACDFG-VPQRRERLYIIDFLN--PSVEFKFPTPLGIKPRLGDILEEH--IDDKSTISN 55 M A D+G +PQ RER+YI+ F + +F P + ++ + D+++ +DDK + Sbjct: 145 MNAADYGNIPQNRERIYIVAFRDKEDYADFDLPKSIPLETSIKDVIDFDSKVDDKFYYTA 204 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFFENSATTN---TLSA 92 + + + KEN + + + + +N TL+A Sbjct: 205 EKNKFFDELKENMTKSDTTYQWRRVYVRENKSNLVPTLTA 244 >gi|313677762|ref|YP_004055758.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] gi|312944460|gb|ADR23650.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] Length = 378 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 4/97 (4%) Query: 2 KACDFGVPQRRERLYIIDFLN--PSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 A ++GVPQ+RER++II F N F FP P + + + + DK ++ W Sbjct: 166 NASEYGVPQKRERVFIIGFKNYEDFAYFNFPQPTTLNDSKVKL--KEVIDKKANKDEKWF 223 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 Q+ + K G NT+S+ K Sbjct: 224 FSQRAVDGMMRVQKKMNKGRDQNLEEPCNTISSHLAK 260 >gi|169823657|ref|YP_001691160.1| cytosine-specific methyltransferase [Finegoldia magna ATCC 29328] gi|167832277|dbj|BAG09192.1| cytosine-specific methyltransferase [Finegoldia magna ATCC 29328] Length = 332 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 8/100 (8%) Query: 1 MKACDFG-VPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHI--DDKSTISN 55 + A +FG +PQ RER+YI+ F + + F+FP P+ + + D ++ D + Sbjct: 147 LNATEFGNIPQNRERIYIVAFRDKNCLDNFEFPKPIELTTTIRDFIDFENKKDTSFYYTE 206 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFFEN---SATTNTLSA 92 K ++ + + K + + + S TL+A Sbjct: 207 KSFKQYDELKFGMDEQDTVYQWRRKYVRKNMSGVCPTLTA 246 >gi|317497298|ref|ZP_07955621.1| C-5 cytosine-specific DNA methylase [Lachnospiraceae bacterium 5_1_63FAA] gi|316895367|gb|EFV17526.1| C-5 cytosine-specific DNA methylase [Lachnospiraceae bacterium 5_1_63FAA] Length = 363 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 24/56 (42%), Positives = 36/56 (64%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A D+GVPQ RER++ I LN +F+FP +K +L DILE+++D K + N Sbjct: 204 LNARDYGVPQNRERVFCISELNGENKFEFPKSRELKLKLYDILEKNVDSKYYLKNN 259 >gi|254933776|ref|ZP_05267135.1| DNA-cytosine methyltransferase [Listeria monocytogenes HPB2262] gi|293585336|gb|EFF97368.1| DNA-cytosine methyltransferase [Listeria monocytogenes HPB2262] Length = 325 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 2/88 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G+PQ RER++++ L + EF+FP + L D ++ +D + ++ + Sbjct: 143 LNARDYGIPQNRERVFVVSVLGNNKEFQFPEKVKPVKSLKDYIDFDVDPTAYALSENEKQ 202 Query: 61 HQKR--KENNKIAGKGFGYGLFFENSAT 86 R K+ G+ + + Sbjct: 203 LFFREGKQLFIHTNTKIGFQEVEQFDSV 230 >gi|291551321|emb|CBL27583.1| DNA-methyltransferase (dcm) [Ruminococcus torques L2-14] Length = 595 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS---VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + + ++G+PQ RERL+++ F +F FP P+ ++ ++ D L ++ + K Sbjct: 368 LNSKNYGIPQNRERLFVVGFREDLELAKKFSFPNPIPLRKKMKDFLMDNAPGGYFLPKKG 427 Query: 58 WEGHQKRKENNKI 70 E K K +K Sbjct: 428 VEFVTKEKNLSKR 440 >gi|323968854|gb|EGB64190.1| DNA-cytosine methyltransferase [Escherichia coli TA007] Length = 272 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 4/57 (7%) Query: 3 ACDFGVPQRRERLYIIDFLNPSV----EFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 A DFGVPQ RER+YI+ F V F FPTPL K R+GDILE+ +D+K T+S+ Sbjct: 215 AKDFGVPQNRERIYIVGFNKEKVRNHEHFTFPTPLKTKTRVGDILEKSVDNKYTLSD 271 >gi|228899601|ref|ZP_04063856.1| Modification methylase SinI [Bacillus thuringiensis IBL 4222] gi|228860031|gb|EEN04436.1| Modification methylase SinI [Bacillus thuringiensis IBL 4222] Length = 362 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 13/76 (17%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIK---------PRLGDILEEHIDDK 50 + A ++GVPQ+RER++II + F+FP P + +G++L+ ++ Sbjct: 171 LNAANYGVPQKRERVFIIGIRQDLKKTFEFPEPTHNELGSDGKESWVTVGEVLKNLKVEE 230 Query: 51 S---TISNKLWEGHQK 63 T S + + + Sbjct: 231 HHFQTYSPERLKYMKM 246 >gi|332310450|gb|EGJ23545.1| DNA-methyltransferase (Dcm) [Listeria monocytogenes str. Scott A] Length = 325 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 2/88 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G+PQ RER++++ L + EF+FP + L D ++ +D + ++ + Sbjct: 143 LNARDYGIPQNRERVFVVSVLGNNKEFQFPEKVKPVKSLKDYIDFDVDPTAYALSENEKQ 202 Query: 61 HQKR--KENNKIAGKGFGYGLFFENSAT 86 R K+ G+ + + Sbjct: 203 LFFREGKQLFIHTNTKIGFQEVEQFDSV 230 >gi|325913633|ref|ZP_08175995.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B] gi|325476992|gb|EGC80142.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B] Length = 372 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 9/98 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 ++A DFG+ Q R+R+ I+ F + + F+FP + DILE++ + IS KL Sbjct: 199 LEASDFGLAQSRKRVIIVGFRSDIDDSSFEFPKGNSKHVAVKDILEDNP-EGYPISKKLQ 257 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 E + +K++ + Y + ++ TL++ Y+K Sbjct: 258 ENYLFKKDDGRP------YVVDKNSTGLAKTLNSSYHK 289 >gi|291320332|ref|YP_003515594.1| modification methylase Bsp6I [Mycoplasma agalactiae] gi|290752665|emb|CBH40638.1| Modification methylase Bsp6I [Mycoplasma agalactiae] Length = 315 Score = 68.5 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 7/99 (7%) Query: 1 MKACDFG-VPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDK--STISN 55 + A D+G +PQ RER+YI+ F + F FP P+ +K L D LE ++DD ++ Sbjct: 145 LNAKDYGDIPQNRERIYIVGFKDKHSYDIFSFPLPVKLKTSLNDCLEVNVDDDCFYYSAD 204 Query: 56 KLWEGHQKR-KENNKIAGKGFGYGLFFEN-SATTNTLSA 92 K ++ + N + + EN + TL+A Sbjct: 205 KNVFYNKLALEIKNVDSIYQWRRKYVRENKNGVCPTLTA 243 >gi|308185227|ref|YP_003929360.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SJM180] gi|308061147|gb|ADO03043.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SJM180] Length = 317 Score = 68.5 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 14/101 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + DFG+PQ+R R++I+ S EF FP + K D+L++ ++ K IS K+ Sbjct: 141 LNTLDFGIPQQRNRVFIVALRKNSFTNLEFVFPAKIPCKISTLDLLDKQVELKYFISQKM 200 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFE--NSATTNTLSARYYK 96 + GKG + ++ TL+A +K Sbjct: 201 IKTIL---------GKGTKGYIVEPSIDTPIAKTLTATMHK 232 >gi|111607698|gb|ABH10736.1| DNA methyltransferase [Flavobacterium sp. 4H] Length = 408 Score = 68.5 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 8/100 (8%) Query: 1 MKACDF-GVPQRRERLYIIDFL----NPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + + VPQ RER++I+ F +F+FP P+ + + D L++ D Sbjct: 238 LNSATHANVPQNRERIFIVAFDPKQVKNYSKFEFPKPIKLTKTIHDFLDKEKQDDIFYYK 297 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 K + + + + + + + S TL+A Sbjct: 298 KDHQYYPELVKTMISKDTVYQWRRVYARENKSNLCPTLTA 337 >gi|293596744|ref|ZP_05263998.2| DNA-methyltransferase [Listeria monocytogenes J2818] gi|293592003|gb|EFG00338.1| DNA-methyltransferase [Listeria monocytogenes J2818] Length = 327 Score = 68.5 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 38/88 (43%), Gaps = 2/88 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFG+PQ RER++++ L + F+FP + L D ++ +D ++ + Sbjct: 150 LNARDFGIPQNRERVFVVSVLGNNTGFQFPEKIESAMSLKDYIDFEVDPTDYALSENEKQ 209 Query: 61 HQKRK--ENNKIAGKGFGYGLFFENSAT 86 R+ + G+ + + Sbjct: 210 LFFRENNKLFIHTNTKKGFQEVEQFDSV 237 >gi|254901064|ref|ZP_05260988.1| DNA-methyltransferase (cytosine-specific) [Listeria monocytogenes J0161] Length = 320 Score = 68.1 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 38/88 (43%), Gaps = 2/88 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFG+PQ RER++++ L + F+FP + L D ++ +D ++ + Sbjct: 143 LNARDFGIPQNRERVFVVSVLGNNTGFQFPEKIESAMSLKDYIDFEVDPTDYALSENEKQ 202 Query: 61 HQKRK--ENNKIAGKGFGYGLFFENSAT 86 R+ + G+ + + Sbjct: 203 LFFRENNKLFIHTNTKKGFQEVEQFDSV 230 >gi|237742049|ref|ZP_04572530.1| modification methylase HpaII [Fusobacterium sp. 4_1_13] gi|229429697|gb|EEO39909.1| modification methylase HpaII [Fusobacterium sp. 4_1_13] Length = 385 Score = 68.1 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 12/102 (11%) Query: 3 ACDFGVPQRRERLYIIDFLNP---SVEFKF-PTPL-----GIKPRLGDILEEHIDDKSTI 53 A DFG+PQRR R YII F F P P I L D+LE D K + Sbjct: 170 AKDFGIPQRRLRTYIIGFRKDLLQDNNFILEPLPKNRTDLKIYKNLNDLLEFQNDIKYYV 229 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFE---NSATTNTLSA 92 ++ + ++ K + + G GFG+ + + NT+ A Sbjct: 230 ASGYLKTLERHKLKHSLKGNGFGFEVVNAPNIKNPIANTILA 271 >gi|50513617|pdb|1SVU|A Chain A, Structure Of The Q237w Mutant Of Hhai Dna Methyltransferase: An Insight Into Protein-Protein Interactions gi|50513618|pdb|1SVU|B Chain B, Structure Of The Q237w Mutant Of Hhai Dna Methyltransferase: An Insight Into Protein-Protein Interactions Length = 327 Score = 68.1 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKL- 57 + A D+G+PQ+RER+Y+I F N F+FP P + + D+L + + + ++ Sbjct: 152 LNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKD 211 Query: 58 -------WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 E + I GKG + TLSA Sbjct: 212 LVMTNQEIEQTTPKTVRLGIVGKGGWGERIYSTRGIAITLSA 253 >gi|166367724|ref|YP_001659997.1| modification methylase NgoBI [Microcystis aeruginosa NIES-843] gi|166090097|dbj|BAG04805.1| modification methylase NgoBI [Microcystis aeruginosa NIES-843] Length = 330 Score = 68.1 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A +FG+PQ+RER++I+ F + F +P P + L +ILEE++ D S ++ + Sbjct: 156 LNALNFGLPQKRERIFIVGFR-EARGFIWPKPALSRTTLTEILEENVSDFYYASARIQKS 214 Query: 61 HQKRKENNKIAGKGFGYG 78 ++E K + + Sbjct: 215 RFLKREGKKPYSEPTIWH 232 >gi|310657624|ref|YP_003935345.1| cytosine-specific methyltransferase [Clostridium sticklandii DSM 519] gi|308824402|emb|CBH20440.1| Cytosine-specific methyltransferase [Clostridium sticklandii] Length = 326 Score = 68.1 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 14/102 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPL----GIKPRLGDILEEHIDDKSTISN 55 M + +FGVPQ+RER+ II F EF FP + L ++E + +K S Sbjct: 154 MNSVNFGVPQKRERVIIIGFRKDLELEFNFPEEIIANEWEFLNLSMVIESEVSEKYFFSE 213 Query: 56 KLWEG-HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 K +G +KR NK + + NT+ A K Sbjct: 214 KAVQGMLKKRATMNKGRAQDI--------NKPCNTVGAHLAK 247 >gi|255279955|ref|ZP_05344510.1| modification methylase EcoRII [Bryantella formatexigens DSM 14469] gi|255269728|gb|EET62933.1| modification methylase EcoRII [Bryantella formatexigens DSM 14469] Length = 311 Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 34/58 (58%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + + DFGVPQ R R Y++ F N EF FP ++ L D+LE+ + +K +S ++ Sbjct: 148 LNSADFGVPQTRNRTYLVCFSNQKAEFTFPQTEPLESTLQDLLEQDVAEKYFLSERII 205 >gi|254003164|ref|YP_003052630.1| C-5 cytosine-specific DNA methylase [Methylovorus sp. SIP3-4] gi|253987247|gb|ACT52103.1| C-5 cytosine-specific DNA methylase [Methylovorus sp. SIP3-4] Length = 550 Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 6/99 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT---PLGIKPRLGDILEEHIDDKSTISNKL 57 + ++G + R+R ++ + +EF F P RLGD+LEE D + Sbjct: 285 LNGKEWGTLENRDRWVMVAVTHG-IEFDFSQLIPPDARPMRLGDVLEEVPLDDPRWNK-- 341 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 + + ++ + GK F +F E+S TL+ Y K Sbjct: 342 MQYLKDKEVRDAAEGKNFKMQIFTEDSEHIGTLTKGYAK 380 >gi|113477918|ref|YP_723979.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] gi|110168966|gb|ABG53506.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] Length = 337 Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 12/97 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL----EEHIDDKSTISNK 56 + DFGVPQ R+R+ +I F FP L K +G+ L + ++ Sbjct: 155 LNTVDFGVPQNRQRVIVIGHKGE---FTFPQVLDKKVTVGEALEEMAFHAPPESKFLTPS 211 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + +K ++ + Y TL+ R Sbjct: 212 MDKYIEKYEKASSCKQPRDLY-----LDKPARTLTCR 243 >gi|148826164|ref|YP_001290917.1| modification methylase [Haemophilus influenzae PittEE] gi|148716324|gb|ABQ98534.1| modification methylase [Haemophilus influenzae PittEE] gi|162532590|gb|ABY16693.1| probable methylase [Haemophilus influenzae] gi|309973308|gb|ADO96509.1| Probable cytosine-specific DNA methyltransferase [Haemophilus influenzae R2846] Length = 409 Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 1/77 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 M + ++G+PQ RER++++ F P F FP + ++ + D LE++ D K + K + Sbjct: 181 MNSKNYGIPQHRERIFVVGFKTPPQGGFMFPAEIPLEHSMQDFLEDYTDSKYYLKEKGIK 240 Query: 60 GHQKRKENNKIAGKGFG 76 K K + G Sbjct: 241 FVTSSKNRQKRYTQING 257 >gi|239812977|ref|YP_002941924.1| DNA-cytosine methyltransferase [Geobacillus sp. WCH70] gi|239809042|gb|ACS26105.1| DNA-cytosine methyltransferase [Geobacillus sp. WCH70] Length = 370 Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 10/83 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIK---------PRLGDILEEHIDDK 50 + A D+GVPQ+RER++II N +++++FP P + +G++LE ++ Sbjct: 172 INAADYGVPQKRERVFIIGVRNDLNIQYEFPEPTHNEDGSDGKLPWVTVGEVLENLQVEE 231 Query: 51 STISNKLWEGHQKRKENNKIAGK 73 E + K K G Sbjct: 232 HHFIPYSKERLRFMKLIPKGGGN 254 >gi|325678044|ref|ZP_08157681.1| putative DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8] gi|324110261|gb|EGC04440.1| putative DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8] Length = 324 Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 19/106 (17%) Query: 1 MKACDFGVPQRRERLYIIDFLNP----SVEFKFPTPLGIKPRLGDILEEHIDD------K 50 + A D+GVPQ+RER+ ++ N + ++ FP P + L + + + Sbjct: 155 INAADYGVPQKRERVIMVGIRNDIFQKNGDYSFPQPTNEGKWVP--LSVAVPELAIENQR 212 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 S K +G + K GL T+++ K Sbjct: 213 YYFSEKAVQGMKNAK-------NNMKRGLAQNLDEPCLTVTSHLAK 251 >gi|42783651|ref|NP_980898.1| DNA-cytosine methyltransferase family protein [Bacillus cereus ATCC 10987] gi|42739580|gb|AAS43506.1| DNA-cytosine methyltransferase family protein [Bacillus cereus ATCC 10987] Length = 362 Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 13/76 (17%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKP---------RLGDILEEHIDDK 50 + A ++GVPQ+RER++II + F FP P + +G++L++ + Sbjct: 171 LNAANYGVPQKRERVFIIGVRQDLEKTFVFPEPTHNEKGTDGKKPWVTVGEVLKQIETKE 230 Query: 51 ST---ISNKLWEGHQK 63 S + + + Sbjct: 231 HHYQSYSPERLKYMKM 246 >gi|313668596|ref|YP_004048880.1| DNA cytosine methyltransferase [Neisseria lactamica ST-640] gi|313006058|emb|CBN87519.1| DNA cytosine methyltransferase [Neisseria lactamica 020-06] Length = 393 Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 11/92 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ+RER+ I+ +++KFP + RL + + ++ + WE Sbjct: 170 LNAADYGVPQKRERVVIVGIRADLDIDWKFPKETHSEDRL--------NWEKYVTGEYWE 221 Query: 60 GHQKRKENNKIAGK--GFGYGLFFENSATTNT 89 H + K NK + YG+F T Sbjct: 222 KHNEPKRFNKDIAEKLQKKYGIFEPEKKPWQT 253 >gi|154173655|ref|YP_001409100.1| cytosine-specific methyltransferase NlaX [Campylobacter curvus 525.92] gi|112802981|gb|EAU00325.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Campylobacter curvus 525.92] Length = 352 Score = 67.0 bits (162), Expect = 8e-10, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFL--NPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + D+G+ Q RER+YI+ FL + + F F + + + D L++ +D+K ++ Sbjct: 152 LNTKDYGIAQNRERIYIVGFLDFDEYLNFDFAPRVPLTTAIRDYLDDEVDEKYYLNENAI 211 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTL 90 E T+ Sbjct: 212 LSMVDPNACFNGKFDP------KETDECAGTI 237 >gi|197303495|ref|ZP_03168534.1| hypothetical protein RUMLAC_02217 [Ruminococcus lactaris ATCC 29176] gi|197297493|gb|EDY32054.1| hypothetical protein RUMLAC_02217 [Ruminococcus lactaris ATCC 29176] Length = 496 Score = 67.0 bits (162), Expect = 8e-10, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 12/103 (11%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV-------EFKFPTPLG--IKPRLGDILEEHIDDKST 52 +FG+PQ R R+YI+ F + P I + ++L+ ++DDK Sbjct: 165 NTREFGLPQNRPRVYIMAFSKKIYGNAIKLLNAQLPISRDETIFRDVTEVLDTNVDDKYY 224 Query: 53 ISNKLWEGHQKRKENNKIAGKGFGYGLFFE---NSATTNTLSA 92 ++ E ++ K K G GFGY + + + T+ A Sbjct: 225 MAEGYLETLKRHKARQKKNGYGFGYCVVNKSNEDHPIAYTILA 267 >gi|159026722|emb|CAO89036.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 455 Score = 67.0 bits (162), Expect = 8e-10, Method: Composition-based stats. Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 3/48 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILEE 45 + A DFG+PQ RER++I+ FKFP PLGI P++ DILE+ Sbjct: 169 LNAYDFGLPQNRERVFIVGIRKDIDNYERFKFPLPLGIHPKVLDILED 216 >gi|309380076|emb|CBX21487.1| putative DNA cytosine methyltransferase [Neisseria lactamica Y92-1009] Length = 377 Score = 67.0 bits (162), Expect = 8e-10, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 11/92 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ+RER+ I+ +++KFP + RL + + ++ + WE Sbjct: 170 LNAADYGVPQKRERVVIVGIRADLDIDWKFPKETHSEDRL--------NWEKYVTGEYWE 221 Query: 60 GHQKRKENNKIAGK--GFGYGLFFENSATTNT 89 H + K NK + YG+F T Sbjct: 222 KHNEPKRFNKDIAEKLQKKYGIFEPEKKPWQT 253 >gi|291087089|ref|ZP_06345376.2| modification methylase HpaII [Clostridium sp. M62/1] gi|291076158|gb|EFE13522.1| modification methylase HpaII [Clostridium sp. M62/1] Length = 490 Score = 67.0 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 12/103 (11%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKF-------PTPLGI--KPRLGDILEEHIDDKST 52 +FG+PQ R R+YI+ F P + DIL+ + ++ Sbjct: 182 NTRNFGLPQNRPRVYIVAFSRNYFGEHLKLIPERTPEKSEKVIFKSVRDILDVDVSERFF 241 Query: 53 ISNKLWEGHQKRKENNKIAGKGFGYGLFFENS---ATTNTLSA 92 +S+ L + ++ K K G GFG + +T+ A Sbjct: 242 LSSGLLKTLEEHKARQKRNGNGFGCRIANATEIECPIASTILA 284 >gi|166368611|ref|YP_001660884.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843] gi|166090984|dbj|BAG05692.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843] Length = 464 Score = 67.0 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 3/48 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILEE 45 + A DFG+PQ RER++I+ FKFP PLGI P++ DILE+ Sbjct: 177 LNAYDFGLPQNRERVFIVGIRKDIDNYERFKFPLPLGIHPKVLDILED 224 >gi|255073161|ref|XP_002500255.1| DNA methyltransferase [Micromonas sp. RCC299] gi|226515517|gb|ACO61513.1| DNA methyltransferase [Micromonas sp. RCC299] Length = 599 Score = 67.0 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 16/104 (15%) Query: 8 VPQRRERLYIIDFLNP------SVEFKFP-TPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 VPQ R+R++ + F + F +P P + D+LE+ + + T ++ E Sbjct: 424 VPQSRKRVFFVGFRSDLRAAREDGVFTWPEEPRDCGGTVKDVLED--EHRETARCEVSEY 481 Query: 61 HQKRKENNKIAGKGFGY-------GLFFENSATTNTLSARYYKD 97 +R + G G + TL A Y K Sbjct: 482 QMERAAAFFRRTQSRGENEGSEHAGYLYPVDGVARTLCASYRKS 525 >gi|308172812|ref|YP_003919517.1| DNA (cytosine-5-)-methyltransferase [Bacillus amyloliquefaciens DSM 7] gi|307605676|emb|CBI42047.1| DNA (cytosine-5-)-methyltransferase [Bacillus amyloliquefaciens DSM 7] Length = 406 Score = 67.0 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 12/96 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRL---GDILEEHIDDKSTISNK 56 M A D+GV Q+RER++I+ F+FP PL + D++ + + + K Sbjct: 246 MSAWDYGVAQKRERVFIVGIRKDLGFTFEFPKPLEGDYQTRVLRDVIGDLPEPERQDCGK 305 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 W K +NT+ A Sbjct: 306 YW--------TPKSEYTYGQANRVQSLDKPSNTIPA 333 >gi|251778642|ref|ZP_04821562.1| methyl transferase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082957|gb|EES48847.1| methyl transferase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 586 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 3/73 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS---VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + + D+GV Q RER++++ F N F+ P + + ++ D L +++ K +++K Sbjct: 330 LNSKDYGVAQNRERIFVVGFRNDLELVKPFEEPEKVQLNKKMKDYLLDNVSGKYYLNSKG 389 Query: 58 WEGHQKRKENNKI 70 K K Sbjct: 390 VAFVTDNKNLQKK 402 >gi|168335325|ref|ZP_02693422.1| DNA-cytosine methyltransferase [Epulopiscium sp. 'N.t. morphotype B'] Length = 324 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A D+GV Q R+R++ I F +++F+FP P KP L DIL + D+ +K Sbjct: 143 LNANDYGVAQDRKRVFYIGFRKDLNIKFEFPKPQEYKPVLRDILWDLKDNAVPALDK 199 >gi|326571776|gb|EGE21785.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC7] Length = 458 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 11/101 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + + D+GVPQ RER Y + S F+FP +L DI+E +DK Sbjct: 261 LNSYDYGVPQFRERWYCVAIRKDSDNGRFEFPKNRDRTTKLRDIIESDNNDK-------- 312 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGS 99 K F E N++ A Y K G Sbjct: 313 -SLILSKFEIDRINYHFANCHINERVEHDNSMYAPYTKKGK 352 >gi|258511120|ref|YP_003184554.1| DNA-cytosine methyltransferase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477846|gb|ACV58165.1| DNA-cytosine methyltransferase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 395 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 9/68 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ+RER++I+ F + ++E+ FP P D L ++ + WE Sbjct: 178 LNAADYGVPQKRERVFIVGFRSDLNIEWSFPNPTHSF----DALLYD----QWVTGEYWE 229 Query: 60 GHQKRKEN 67 H+ K++ Sbjct: 230 RHRVAKKH 237 >gi|197302809|ref|ZP_03167861.1| hypothetical protein RUMLAC_01538 [Ruminococcus lactaris ATCC 29176] gi|197298046|gb|EDY32594.1| hypothetical protein RUMLAC_01538 [Ruminococcus lactaris ATCC 29176] Length = 333 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 11/104 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHID---------D 49 + A D+G+PQ+RER+Y++ F N F +P P + + + L + + Sbjct: 152 LNAVDYGIPQKRERIYMVCFRNDLGITGFSYPKPFKLTRHVENFLLDDEEMVKDLYVERP 211 Query: 50 KSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + + + + I KG + TLSA Sbjct: 212 DTYFNGIEDDQYSNKSIRLGIVNKGGQGERIYSTKGIAITLSAS 255 >gi|59801568|ref|YP_208280.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae FA 1090] gi|194097887|ref|YP_002000932.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae NCCP11945] gi|239998362|ref|ZP_04718286.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae 35/02] gi|240113683|ref|ZP_04728173.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae MS11] gi|240116425|ref|ZP_04730487.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae PID18] gi|240117164|ref|ZP_04731226.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae PID1] gi|240125114|ref|ZP_04738000.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae SK-92-679] gi|254494438|ref|ZP_05107609.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae 1291] gi|260441646|ref|ZP_05795462.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae DGI2] gi|268594223|ref|ZP_06128390.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae 35/02] gi|268599750|ref|ZP_06133917.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae MS11] gi|268602094|ref|ZP_06136261.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae PID18] gi|268602852|ref|ZP_06137019.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae PID1] gi|268683710|ref|ZP_06150572.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae SK-92-679] gi|291045024|ref|ZP_06570732.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae DGI2] gi|10444408|gb|AAG17898.1|AF297971_2 DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae] gi|59718463|gb|AAW89868.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae FA 1090] gi|193933177|gb|ACF29001.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae NCCP11945] gi|226513478|gb|EEH62823.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae 1291] gi|268547612|gb|EEZ43030.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae 35/02] gi|268583881|gb|EEZ48557.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae MS11] gi|268586225|gb|EEZ50901.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae PID18] gi|268586983|gb|EEZ51659.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae PID1] gi|268623994|gb|EEZ56394.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae SK-92-679] gi|291011027|gb|EFE03024.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae DGI2] gi|317163651|gb|ADV07192.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae TCDC-NG08107] Length = 377 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 11/92 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ+RER+ I+ +++KFP + RL + + ++ + WE Sbjct: 170 LNAADYGVPQKRERVVIVGIRADLDIDWKFPKRTHSEDRL--------NWEKYVTGEYWE 221 Query: 60 GHQKRKENNKIAGK--GFGYGLFFENSATTNT 89 H + K NK + YG+F T Sbjct: 222 KHNEPKRFNKDIAEKLQKKYGIFEPEKKPWQT 253 >gi|12084381|pdb|1FJX|A Chain A, Structure Of Ternary Complex Of Hhai Methyltransferase Mutant (T250g) In Complex With Dna And Adohcy gi|85544394|pdb|2C7R|A Chain A, Hhai Dna Methyltransferase (T250g Mutant) Complex With Oligonucleotide Containing 2-Aminopurine As A Target Base (Gpgc:gmgc) And Sah Length = 327 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A D+G+PQ+RER+Y+I F N F+FP P + + D+L + + + ++ Sbjct: 152 LNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDR 209 >gi|257870038|ref|ZP_05649691.1| DNA methylase [Enterococcus gallinarum EG2] gi|257804202|gb|EEV33024.1| DNA methylase [Enterococcus gallinarum EG2] Length = 401 Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 8/100 (8%) Query: 1 MKACDFG-VPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILE--EHIDDKSTISN 55 + D+G VPQ RER+Y++ F N F FP+ + + +L D+++ DDK Sbjct: 156 LNGKDYGNVPQNRERIYVVGFRNQQAFDNFHFPSKVELTTKLSDVIDFENPKDDKYYYKK 215 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 +++ +++ + + + S TL+A Sbjct: 216 NRQPFYEQLEKSIVDDNTVYQWRRQYVRENKSGVVPTLTA 255 >gi|307140960|ref|ZP_07500316.1| DNA-cytosine methyltransferase [Escherichia coli H736] gi|331645014|ref|ZP_08346131.1| DNA cytosine methyltransferase M.NgoMIII [Escherichia coli H736] gi|331035989|gb|EGI08227.1| DNA cytosine methyltransferase M.NgoMIII [Escherichia coli H736] Length = 413 Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIK 36 A D+GVPQ+RER++I+ F + +E+ FP P Sbjct: 193 NAADYGVPQKRERVFIVGFRDDLEIEWSFPKPTHSY 228 >gi|119493789|ref|ZP_01624358.1| type II restriction enzyme HaeII [Lyngbya sp. PCC 8106] gi|119452484|gb|EAW33671.1| type II restriction enzyme HaeII [Lyngbya sp. PCC 8106] Length = 689 Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 8/87 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEE--HIDDKSTISNKLW 58 + A DFG+PQ+RER YI+ FL ++ F FP P+ + L +ILE +D S Sbjct: 150 LNALDFGLPQKRERTYIVGFL-ENIHFSFPKPIQKRVSLSEILEPDEQVDKSLFASE--- 205 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSA 85 ++K ++ K F ++ EN + Sbjct: 206 --FIQKKRIQRLKVKPFYPSIWHENKS 230 >gi|57506196|ref|ZP_00372116.1| C-5 cytosine-specific DNA methylase [Campylobacter upsaliensis RM3195] gi|57015523|gb|EAL52317.1| C-5 cytosine-specific DNA methylase [Campylobacter upsaliensis RM3195] Length = 315 Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 4/96 (4%) Query: 1 MKACDFG-VPQRRERLYIIDFLN--PSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + ++G +PQ RER+YII FL+ F FP + + ++ +LE+ +D ++ Sbjct: 142 LNTSEYGNIPQNRERIYIIGFLDFHTYESFHFPAKIKLTQKIQHLLEKGVDKSFYYTSHK 201 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFEN-SATTNTLSA 92 + K++ +K + EN + TL+A Sbjct: 202 YCAQLKKEMQSKETLYQWRRHYVRENKNNLCPTLTA 237 >gi|220903553|ref|YP_002478865.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867852|gb|ACL48187.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 308 Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 35/103 (33%), Gaps = 15/103 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLG---------IKPRLGDILEEHIDDK 50 + A D+GVPQ R+R++I V F +P +G+ L D Sbjct: 142 LNAADYGVPQTRQRVFIAGVRKDLDVIFTYPDATHSCEGTGGLKKWRSVGEALAGLPDPD 201 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + K+ G+ + T++AR Sbjct: 202 EPNDILNHDYSKY-----KLRFNGYLGHREIDPGKPAPTVTAR 239 >gi|148380278|ref|YP_001254819.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum A str. ATCC 3502] gi|148289762|emb|CAL83870.1| putative C-5 cytosine-specific DNA methylase [Clostridium botulinum A str. ATCC 3502] Length = 340 Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + + D+G PQ RER++ I FKFP P+ + IL+E++D K NK Sbjct: 152 LNSKDYGSPQSRERMFCISIRKDIDACLFKFPKPMDSIVPINTILDEYVDKKYYCINKY 210 >gi|294668765|ref|ZP_06733858.1| modification methylase BsuRI [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309282|gb|EFE50525.1| modification methylase BsuRI [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 313 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 10/78 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLG------IKPRLGDILEEHID---DK 50 + A D+GVPQ R+R++I+ N E+ FP P +G+ L D + Sbjct: 141 LNAADYGVPQLRKRIFIVGIRNDIGAEYTFPAPTHGTEGKPPHITIGEALRGMPDWPEGE 200 Query: 51 STISNKLWEGHQKRKENN 68 W + + + Sbjct: 201 YYDRPFHWYYLSRNRRQD 218 >gi|254445875|ref|ZP_05059351.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae bacterium DG1235] gi|198260183|gb|EDY84491.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae bacterium DG1235] Length = 321 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 14/105 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK-- 56 + A D+GVPQ R+RLYI+ S EFKFP G + RL D+L + + + Sbjct: 147 LNASDYGVPQARKRLYIVGIRKDLGSGEFKFPETSGARVRLKDLLLLNGAADAMRIERDD 206 Query: 57 ----------LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + + + + KG + TLS Sbjct: 207 IRITKTDIAEVLDRRPNKPVQIGVINKGGQGERIYSVEGHAITLS 251 >gi|325912423|ref|ZP_08174818.1| modification methylase HhaI [Lactobacillus iners UPII 143-D] gi|325475765|gb|EGC78936.1| modification methylase HhaI [Lactobacillus iners UPII 143-D] Length = 314 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 11/103 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHID--------DK 50 + D+GVPQ+RER+Y++ F N F FP P + + D L + + Sbjct: 131 LNPVDYGVPQKRERIYMLCFRNDINREVFTFPRPFKLNKFVEDFLISDYEVNSLIVDRED 190 Query: 51 STISNKL-WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 ++ K+ + GKG + TLSA Sbjct: 191 LRLNEKIDINYNSISTIRVGTVGKGGQGERIYSPKGIAITLSA 233 >gi|67920370|ref|ZP_00513890.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] gi|67857854|gb|EAM53093.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] Length = 339 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 12/97 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL----EEHIDDKSTISNK 56 + + DFGVPQ RERL ++ +F+FP + G+ L + + D ++ Sbjct: 157 LNSVDFGVPQNRERLMVVGHRG---KFQFPQISAKRITAGEALGELAFQVLPDSKFLTPS 213 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + K ++ + TL+ R Sbjct: 214 MDKYIAKYEKASCCK-----RPRDLHLDKQARTLTCR 245 >gi|110643908|ref|YP_671638.1| putative type II 5-cytosoine methyltransferase [Escherichia coli 536] gi|110345500|gb|ABG71737.1| putative type II 5-cytosoine methyltransferase [Escherichia coli 536] Length = 315 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 8/100 (8%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGD-------ILEEHIDDKSTI 53 D+GVPQ R R+ I+ + VE+ +P P P+ D I Sbjct: 144 NVADYGVPQMRYRVIIVGVRDDIKVEYIYPQPTHSSPKKSDKTGLAPWISIGDALHDIPE 203 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + KI + F + + + T+ AR Sbjct: 204 PDSENDLLNHVYSTYKITNRNFTGHRETDPNKPSPTILAR 243 >gi|309803758|ref|ZP_07697844.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV 11V1-d] gi|308164167|gb|EFO66428.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV 11V1-d] Length = 336 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 11/103 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNKL- 57 + ++G+PQ+RER+Y++ F N F FP P + + D L + + I N+ Sbjct: 152 LNPINYGIPQKRERVYMVCFRNDIERELFVFPQPFKLNRFVEDFLLPDNEVRDLIVNRTD 211 Query: 58 --------WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + GKG + TLSA Sbjct: 212 LVLNDKVNINYNSPSTIRVGTVGKGGQGERIYSPKGIAITLSA 254 >gi|166163613|gb|ABY83631.1| DNA methyltransferase Cfr42I [Citrobacter freundii] Length = 402 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIK 36 A D+G+PQ+RER++I+ F + +E+ FP P Sbjct: 182 NAADYGIPQKRERVFIVGFRDDLEIEWSFPKPTHSY 217 >gi|24527985|emb|CAD33712.1| putative DNA methylase [Escherichia coli] Length = 314 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 8/100 (8%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGD-------ILEEHIDDKSTI 53 D+GVPQ R R+ I+ + VE+ +P P P+ D I Sbjct: 143 NVADYGVPQMRYRVIIVGVRDDIKVEYIYPQPTHSSPKKSDKTGLAPWISIGDALHDIPE 202 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + KI + F + + + T+ AR Sbjct: 203 PDSENDLLNHVYSTYKITNRNFTGHRETDPNKPSPTILAR 242 >gi|77918034|ref|YP_355849.1| C-5 cytosine-specific DNA methylase [Pelobacter carbinolicus DSM 2380] gi|77544117|gb|ABA87679.1| C-5 cytosine-specific DNA methylase [Pelobacter carbinolicus DSM 2380] Length = 405 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 + A ++GVPQ RER++I+ + EF+FP P P Sbjct: 163 LNAANYGVPQVRERVFIVGSRDGK-EFQFPEPTHQNP 198 >gi|329767116|ref|ZP_08258644.1| hypothetical protein HMPREF0428_00341 [Gemella haemolysans M341] gi|328837841|gb|EGF87466.1| hypothetical protein HMPREF0428_00341 [Gemella haemolysans M341] Length = 396 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 8/100 (8%) Query: 1 MKACDFG-VPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDK--STISN 55 + D+G VPQ RER+YI+ FL +F+FP + ++ +L DI++ I +K + Sbjct: 145 LNGKDYGNVPQNRERIYIVGFLEKESFDKFEFPKKIKLETKLSDIIDFDIKEKEIYYYRD 204 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + K K+ + + + S L+A Sbjct: 205 GKQPFYDKLKDEITSQNTVYQWRRQYVRENKSGVVPALTA 244 >gi|312872570|ref|ZP_07732638.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 2062A-h1] gi|311091932|gb|EFQ50308.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 2062A-h1] Length = 336 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 11/103 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL- 57 + ++G+PQ+RER+Y++ F N F FP P + + D L + + I N+ Sbjct: 152 LNPINYGIPQKRERVYMVCFRNDIERESFVFPQPFKLNRFVEDFLLPDNEVRDLIVNRTD 211 Query: 58 --------WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + GKG + TLSA Sbjct: 212 LVLNDKVNINYNSPSTIRVGTVGKGGQGERIYSPKGIAITLSA 254 >gi|309807025|ref|ZP_07701007.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV 03V1-b] gi|308166645|gb|EFO68842.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV 03V1-b] Length = 336 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 11/103 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNKL- 57 + ++G+PQ+RER+Y++ F N F FP P + + D L + + I N+ Sbjct: 152 LNPINYGIPQKRERVYMVCFRNDIERELFVFPQPFKLNRFVEDFLLPDNEVRDLIVNRTD 211 Query: 58 --------WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + GKG + TLSA Sbjct: 212 LVLNDKVNINYNSPSTIRVGTVGKGGQGERIYSPKGIAITLSA 254 >gi|329920363|ref|ZP_08277095.1| modification methylase HhaI [Lactobacillus iners SPIN 1401G] gi|328936039|gb|EGG32492.1| modification methylase HhaI [Lactobacillus iners SPIN 1401G] Length = 336 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 11/103 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL- 57 + ++G+PQ+RER+Y++ F N F FP P + + D L + + I N+ Sbjct: 152 LNPINYGIPQKRERVYMVCFRNDVERESFVFPQPFKLNRFVEDFLLPDNEVRDLIVNRTD 211 Query: 58 --------WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + GKG + TLSA Sbjct: 212 LVLNDKVNINYNSPSTIRVGTVGKGGQGERIYSPKGIAITLSA 254 >gi|309804726|ref|ZP_07698791.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV 09V1-c] gi|312871535|ref|ZP_07731628.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 3008A-a] gi|325913106|ref|ZP_08175476.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B] gi|308166118|gb|EFO68336.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV 09V1-c] gi|311092930|gb|EFQ51281.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 3008A-a] gi|325477527|gb|EGC80669.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B] Length = 336 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 11/103 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNKL- 57 + ++G+PQ+RER+Y++ F N F FP P + + D L + + I N+ Sbjct: 152 LNPINYGIPQKRERVYMVCFRNDIERELFVFPQPFKLNRFVEDFLLPDNEVRDLIVNRTD 211 Query: 58 --------WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + GKG + TLSA Sbjct: 212 LVLNDKVNINYNSPSTIRVGTVGKGGQGERIYSPKGIAITLSA 254 >gi|237739124|ref|ZP_04569605.1| C-5 cytosine-specific DNA methylase [Fusobacterium sp. 2_1_31] gi|229423724|gb|EEO38771.1| C-5 cytosine-specific DNA methylase [Fusobacterium sp. 2_1_31] Length = 361 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 15/100 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A ++GV Q+RERL I+ N + F FPTP KP L DIL + + K ++ Sbjct: 179 LNAWNYGVAQKRERLIIVGIRNDLINKLNFLFPTPHKYKPVLRDILLDCPESKGIAYSE- 237 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKD 97 K+ GY ++ Y K Sbjct: 238 ------YKKKIFEMVPPGGYWKDIPKE-----IAKEYMKS 266 >gi|281420197|ref|ZP_06251196.1| modification methylase HgiDII [Prevotella copri DSM 18205] gi|281405692|gb|EFB36372.1| modification methylase HgiDII [Prevotella copri DSM 18205] Length = 353 Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 33/126 (26%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A D+GVPQRR+R+ I+ F++P P K + + + + S+ Sbjct: 157 LDAQDYGVPQRRKRVVIVGERKDHKIPLFEYPKPQEHKITVREAIAYLPEPPEDGSDHPH 216 Query: 59 EGHQKR----------------------------KENNKIAGKGFGYGLFFEN---SATT 87 +R + +K++ K G+ + Sbjct: 217 ISLHRRDRLSAKNIARLQALKPGQGRDFLPPELLADCHKVSSKLIGHRNVYGRMPWDDVA 276 Query: 88 NTLSAR 93 T++AR Sbjct: 277 PTITAR 282 >gi|23100788|ref|NP_694255.1| cytosine-specific DNA-methyltransferase [Oceanobacillus iheyensis HTE831] gi|22779022|dbj|BAC15289.1| cytosine-specific DNA-methyltransferase [Oceanobacillus iheyensis HTE831] Length = 370 Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 44/99 (44%), Gaps = 7/99 (7%) Query: 1 MKACDFG-VPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEE-HIDDKSTISNK 56 M D+G +PQ RER++I+ F + +F++P +G+ + ++++ D + + Sbjct: 177 MNTMDYGNIPQNRERIFIVGFKDEEKYNKFQWPQKIGLTKSIDNVIDRSKKQDDAYYYTE 236 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + + E+ K + + S TL+A Sbjct: 237 ESQYYSMIVESMKNRNTVYQLRRVYMRENQSNVCPTLTA 275 >gi|255018626|ref|ZP_05290752.1| DNA-methyltransferase (cytosine-specific) [Listeria monocytogenes FSL F2-515] Length = 172 Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 29/49 (59%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDD 49 + A DFG+PQ RER++++ L + EF+FP + L D ++ ++ Sbjct: 110 LNARDFGIPQNRERVFVVSVLGNNKEFQFPEKVEPVKSLKDYIDFDVEP 158 >gi|238025826|ref|YP_002910057.1| DNA cytosine methyltransferase M.NgoMIII [Burkholderia glumae BGR1] gi|237875020|gb|ACR27353.1| DNA cytosine methyltransferase M.NgoMIII [Burkholderia glumae BGR1] Length = 407 Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPR 38 A D+GVPQ+RER++I+ F + V++ FP P Sbjct: 183 NAADYGVPQKRERVFIVGFRSDLDVDWSFPRPTHSYDS 220 >gi|2765225|emb|CAA73243.1| methylase [Lactococcus lactis subsp. cremoris] Length = 317 Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 8/99 (8%) Query: 2 KACDFG-VPQRRERLYIIDF--LNPSVEFKFPTPLGIKPRLGDILEE--HIDDKSTISNK 56 A ++G +PQ RER+YI+ F F+ P + +K + D+++ DDK +++ Sbjct: 146 NASEYGNIPQNRERIYIVAFKNKKDYANFELPKSIPLKTTIHDVIDFSKKQDDKFYYTSE 205 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTN---TLSA 92 + + KEN + + + +N TL+A Sbjct: 206 KNKFFDELKENMTNHDTTYQWRRVYVRENKSNLVPTLTA 244 >gi|254421659|ref|ZP_05035377.1| C-5 cytosine-specific DNA methylase superfamily [Synechococcus sp. PCC 7335] gi|196189148|gb|EDX84112.1| C-5 cytosine-specific DNA methylase superfamily [Synechococcus sp. PCC 7335] Length = 427 Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 27/54 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTIS 54 + A ++G+PQ RERL+++ N + +P PL P L + D + S Sbjct: 161 LNARNYGIPQNRERLFLVGARNNTCLPIYPKPLKHSPTCTHALGDLPDVEQFHS 214 >gi|189339547|pdb|2UZ4|A Chain A, Hhai Dna Methyltransferase R165n Mutant Complex With 13mer Gcgc-Gmgc Oligonucleotide And Sah Length = 327 Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 10/102 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKL- 57 + A D+G+PQ+RE +Y+I F N F+FP P + + D+L + + + ++ Sbjct: 152 LNALDYGIPQKRENIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKD 211 Query: 58 -------WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 E + I GKG + TLSA Sbjct: 212 LVMTNQEIEQTTPKTVRLGIVGKGGQGERIYSTRGIAITLSA 253 >gi|189096047|pdb|2UYC|A Chain A, Hhai Dna Methyltransferase R163n Mutant Complex With 13mer Gcgc-Gmgc Oligonucleotide And Sah Length = 327 Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 10/102 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKL- 57 + A D+G+PQ+ ER+Y+I F N F+FP P + + D+L + + + ++ Sbjct: 152 LNALDYGIPQKNERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKD 211 Query: 58 -------WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 E + I GKG + TLSA Sbjct: 212 LVMTNQEIEQTTPKTVRLGIVGKGGQGERIYSTRGIAITLSA 253 >gi|260890220|ref|ZP_05901483.1| modification methylase EcoRII [Leptotrichia hofstadii F0254] gi|260859840|gb|EEX74340.1| modification methylase EcoRII [Leptotrichia hofstadii F0254] Length = 293 Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 8/100 (8%) Query: 1 MKACDFG-VPQRRERLYIIDFLN--PSVEFKFPTPLGIKPRLGDILEEH--IDDKSTISN 55 + A ++G VPQ RER+YII F F+ PL ++ ++GDI++ +D+K Sbjct: 115 LNASEYGNVPQNRERIYIIGFRKKEDYDNFEDIKPLKLEKKIGDIIDFDKKVDEKYYYRK 174 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + + + ++ + + + S TL+A Sbjct: 175 EKNIFYDELEKEITKKDTIYQWRRKYVRENKSNLCPTLTA 214 >gi|256819660|ref|YP_003140939.1| DNA-cytosine methyltransferase [Capnocytophaga ochracea DSM 7271] gi|256581243|gb|ACU92378.1| DNA-cytosine methyltransferase [Capnocytophaga ochracea DSM 7271] Length = 318 Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 38/100 (38%), Gaps = 8/100 (8%) Query: 1 MKACDF-GVPQRRERLYIIDFLNPSV----EFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + ++ +PQ RER++I+ F V EF+FP + + + LE+ + Sbjct: 148 LNTMEYANIPQNRERIFIVAFDPKQVPNYKEFQFPEKIKLTKTIHSFLEKGKQNDYFYYQ 207 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + + + + + + + TL+A Sbjct: 208 LSHKYSPELIKIVTRKDTIYQWRRVYVRENKNNVCPTLTA 247 >gi|224436796|ref|ZP_03657794.1| modification methylase HaeIII [Helicobacter cinaedi CCUG 18818] gi|313143285|ref|ZP_07805478.1| cytosine specific DNA methyltransferase [Helicobacter cinaedi CCUG 18818] gi|313128316|gb|EFR45933.1| cytosine specific DNA methyltransferase [Helicobacter cinaedi CCUG 18818] Length = 305 Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Query: 1 MKACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GV Q R+R+ II + E FP PL KP+ L E I D ++ Sbjct: 148 LNASDYGVAQNRKRVIIIGRRVDIKQEIDFPKPLHKKPKT---LREAIFDLPLEYDENIA 204 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 H K +KI G+ T++ R Sbjct: 205 NHTGSK--HKININGYVGNRILAWDKPAPTITGR 236 >gi|304311589|ref|YP_003811187.1| C-5 cytosine-specific DNA methylase [gamma proteobacterium HdN1] gi|301797322|emb|CBL45542.1| C-5 cytosine-specific DNA methylase [gamma proteobacterium HdN1] Length = 387 Score = 64.3 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 32/95 (33%), Gaps = 8/95 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW- 58 + A D+GVPQ RER+ II + ++ + FP P + R +L + Sbjct: 170 INAADYGVPQVRERVIIIGLRSDLNLNWSFPEPTHSQDR---LLWDIHVSGEYWEQHRVS 226 Query: 59 ---EGHQKRKENNKIAGKGFGYGLFFENSATTNTL 90 + YGL T+ Sbjct: 227 AKEKAIVLASTEKMANRIYCRYGLLEPEHLPWKTI 261 >gi|218248203|ref|YP_002373574.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] gi|257060473|ref|YP_003138361.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] gi|218168681|gb|ACK67418.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] gi|256590639|gb|ACV01526.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] Length = 460 Score = 64.3 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 3/62 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A DFG+PQ R+R++++ N ++FP PL I P++ DIL++ + K KL Sbjct: 168 LNAYDFGLPQNRDRVFLVGIRNDIEGSQNYQFPDPLNIHPKVLDILDDLKNIKPIKKVKL 227 Query: 58 WE 59 E Sbjct: 228 SE 229 >gi|291165856|gb|EFE27903.1| modification methylase EcoRII [Filifactor alocis ATCC 35896] Length = 375 Score = 64.3 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 13/104 (12%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFK--------FPTPLG--IKPRLGDILEEHIDDKS 51 + +FG+PQ R R YI+ F PT + L +LE + K Sbjct: 165 NSRNFGIPQNRPRTYIMAFNRQLYGADTLLGIGNLLPTEKNRYLYEDLNSLLEFRAEPKY 224 Query: 52 TISNKLWEGHQKRKENNKIAGKGFGYGLFFE---NSATTNTLSA 92 +S+ + + +E + G GFGY + E NT+ A Sbjct: 225 YMSSGYFNTLVRHRERERKKGNGFGYRVVNEPGIEHPVANTIMA 268 >gi|82752078|ref|YP_417819.1| DNA modification methylase [Staphylococcus aureus RF122] gi|82657609|emb|CAI82057.1| DNA modification methylase [Staphylococcus aureus RF122] Length = 402 Score = 64.3 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 8/100 (8%) Query: 1 MKACDFG-VPQRRERLYIIDF--LNPSVEFKFPTPLGIKPRLGDILEE--HIDDKSTISN 55 + A D+G +PQ RER+YI+ F F+FP + +K + DI+ ID++ Sbjct: 156 LNAKDYGDIPQNRERIYIVGFKCRKAFDLFEFPEKIDLKTGIKDIINFESEIDERYYYRL 215 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + + ++ K + + + + S TL+A Sbjct: 216 NKQPFYDELEKEMKDSNLIYQWRRRYVRANKSGVVPTLTA 255 >gi|307152213|ref|YP_003887597.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] gi|306982441|gb|ADN14322.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] Length = 317 Score = 64.3 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A DFG+PQ+RER++I+ L + F++P P+ L +ILE + S ++ Sbjct: 159 LNALDFGLPQKRERIFIVGCL-EPIPFEWPMPVRTIKPLKEILETTVAASYYASEQI 214 >gi|327399867|ref|YP_004346898.1| cytosine-specific methyltransferase [Lactobacillus amylovorus GRL 1112] gi|327182537|gb|AEA32972.1| cytosine-specific methyltransferase [Lactobacillus amylovorus GRL 1112] Length = 401 Score = 64.3 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 8/100 (8%) Query: 1 MKACDFG-VPQRRERLYIIDFLN--PSVEFKFPTPLGIKPRLGDILEEH--IDDKSTISN 55 + D+G +PQ RER+Y++ F N F FP P+ + L DI++ H D+K Sbjct: 153 LNGKDYGNIPQNRERIYVVGFDNKEDYDRFDFPAPIKLTKTLHDIIDFHGKKDEKYYYRE 212 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + K + + + S TL+A Sbjct: 213 GKQPFYDKLVPEITSQDTAYQWRRQYVRANKSNVLPTLTA 252 >gi|158431504|pdb|2Z6Q|A Chain A, Ternary Structure Of Arg165ala M.Hhai C5-Cytosine Dna Methyltransferase With Unmodified Dna And Adohcy Length = 327 Score = 64.3 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 10/102 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKL- 57 + A D+G+PQ+RE +Y+I F N F+FP P + + D+L + + + ++ Sbjct: 152 LNALDYGIPQKREAIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKD 211 Query: 58 -------WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 E + I GKG + TLSA Sbjct: 212 LVMTNQEIEQTTPKTVRLGIVGKGGQGERIYSTRGIAITLSA 253 >gi|239999928|ref|ZP_04719852.1| NgoIM [Neisseria gonorrhoeae 35/02] gi|240116859|ref|ZP_04730921.1| NgoIM [Neisseria gonorrhoeae PID1] gi|240127204|ref|ZP_04739865.1| NgoIM [Neisseria gonorrhoeae SK-93-1035] Length = 278 Score = 64.3 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + DFG+PQ+RER+YI+ F + ++ F FP P+ LG++LE D + + L + Sbjct: 105 LNTLDFGLPQKRERIYIVGF-SDNIPFYFPEPINQYRPLGELLENDRDVEPSYF--LSDT 161 Query: 61 HQKRKENNKIAG 72 ++++ Sbjct: 162 LKQKRLAALKKA 173 >gi|296313699|ref|ZP_06863640.1| modification methylase NgoBI [Neisseria polysaccharea ATCC 43768] gi|296839717|gb|EFH23655.1| modification methylase NgoBI [Neisseria polysaccharea ATCC 43768] Length = 315 Score = 63.9 bits (154), Expect = 6e-09, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + DFG+PQ+RER+YI+ F + ++ F FP P+ LGD+LE D + + L + Sbjct: 142 LNTLDFGLPQKRERIYIVGF-SDNIPFYFPEPINQYRPLGDLLENDRDVEPSYF--LSDA 198 Query: 61 HQKRKENNKIAG 72 ++++ Sbjct: 199 LKQKRLAALKKA 210 >gi|209524941|ref|ZP_03273486.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209494590|gb|EDZ94900.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 442 Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 7/80 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLGIKPRLGDIL----EEHIDDKSTI 53 + A DFG+PQ R+R++I+ F+FP PL + P+L D + ++ + K Sbjct: 160 INASDFGLPQDRDRVFIVGIRRDINQGQNFQFPQPLNLHPKLFDFVEGVSQKPVIKKKFS 219 Query: 54 SNKLWEGHQKRKENNKIAGK 73 L+ H Sbjct: 220 PQVLFGNHIPPARGRFQKND 239 >gi|67922277|ref|ZP_00515790.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] gi|67855853|gb|EAM51099.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] Length = 226 Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++II + F F P + L +I+E+ + + S + + Sbjct: 167 LNALDFGLPQKRERIFIIGLR-DPLNFTFKKPNISRKPLSEIIEKSVSEFYYASEHIQK 224 >gi|268595734|ref|ZP_06129901.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae 35/02] gi|291044897|ref|ZP_06570606.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|293397972|ref|ZP_06642178.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|268549123|gb|EEZ44541.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae 35/02] gi|291011791|gb|EFE03787.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291611918|gb|EFF40987.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] Length = 320 Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + DFG+PQ+RER+YI+ F + ++ F FP P+ LG++LE D + + L + Sbjct: 147 LNTLDFGLPQKRERIYIVGF-SDNIPFYFPEPINQYRPLGELLENDRDVEPSYF--LSDT 203 Query: 61 HQKRKENNKIAG 72 ++++ Sbjct: 204 LKQKRLAALKKA 215 >gi|315222617|ref|ZP_07864506.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211] gi|315188303|gb|EFU22029.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211] Length = 348 Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A D+GVPQ R+R++ + F +++F+ P P K D + + D K Sbjct: 150 LNASDYGVPQDRKRVFYVGFRKDLNIKFEPPKPYESKLTFKDAIFDLKDSAIPALEK 206 >gi|171911881|ref|ZP_02927351.1| DNA-cytosine methyltransferase [Verrucomicrobium spinosum DSM 4136] Length = 330 Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 12/97 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGD----ILEEHIDDKSTISNK 56 + + FGVPQ+RERL ++ L F FP P D +L + ++ Sbjct: 156 LNSVHFGVPQKRERLVVVGHLGG---FVFPAPSAKVWTSADALEGMLYATPPESRFLTPS 212 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + ++ + TL+ R Sbjct: 213 MDKYIANYEKASAC-----VRPRDLHLDLPARTLTCR 244 >gi|268597921|ref|ZP_06132088.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae FA19] gi|268551709|gb|EEZ46728.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae FA19] Length = 320 Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + DFG+PQ+RER+YI+ F + ++ F FP P+ LG++LE D + + L + Sbjct: 147 LNTLDFGLPQKRERIYIVGF-SDNIPFYFPEPINQYRPLGELLENDRDVEPSYF--LSDT 203 Query: 61 HQKRKENNKIAG 72 ++++ Sbjct: 204 LKQKRLAALKKA 215 >gi|308063322|gb|ADO05209.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori Sat464] Length = 348 Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER+ ++ L +F FP P+ L D L + +S + Sbjct: 145 LNALDYGVPQIRERVILVGVLKSFKQKFHFPKPIKTHFSLKDALGDLPPIQSGENGDALG 204 Query: 60 GHQK 63 + Sbjct: 205 YLKN 208 >gi|188527268|ref|YP_001909955.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori Shi470] gi|188143508|gb|ACD47925.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori Shi470] Length = 348 Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER+ ++ L +F FP P+ L D L + +S + Sbjct: 145 LNALDYGVPQIRERVILVGVLKSFKQKFHFPKPIKTHFSLKDALGDLPPIQSGENGDALG 204 Query: 60 GHQK 63 + Sbjct: 205 YLKN 208 >gi|317483873|ref|ZP_07942812.1| C-5 cytosine-specific DNA methylase [Bilophila wadsworthia 3_1_6] gi|316924890|gb|EFV46037.1| C-5 cytosine-specific DNA methylase [Bilophila wadsworthia 3_1_6] Length = 401 Score = 63.9 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 9/90 (10%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 A D+G+PQRRER++I+ F + V + FP + +L IS + W+ Sbjct: 179 NAADYGIPQRRERVFIVGFRHDLGVRWSFPETTH---SMEGLLYS-----QWISGEYWDH 230 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTL 90 H+ + + +TL Sbjct: 231 HKVSFKARGPLNDKHKTRIEKLRGMDASTL 260 >gi|126660265|ref|ZP_01731380.1| putative DNA modification methylase (N.MgoV) [Cyanothece sp. CCY0110] gi|126618440|gb|EAZ89194.1| putative DNA modification methylase (N.MgoV) [Cyanothece sp. CCY0110] Length = 458 Score = 63.9 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 7/65 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDIL----EEHIDDKSTI 53 + + DFGVPQ RER++I+ ++FP PL ++ RL D+L + +K + Sbjct: 173 INSYDFGVPQNRERVFIVGIRKDRKNCHHYQFPKPLKVQIRLLDVLDELKHCQVTEKVKL 232 Query: 54 SNKLW 58 + ++ Sbjct: 233 TPEIL 237 >gi|145638078|ref|ZP_01793692.1| putative type II 5-cytosoine methyltransferase [Haemophilus influenzae PittHH] gi|145268726|gb|EDK08715.1| putative type II 5-cytosoine methyltransferase [Haemophilus influenzae PittHH] Length = 226 Score = 63.9 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTIS 54 + A D+GVPQ R+R+ I+ ++F+FP D L+ + K IS Sbjct: 147 LNAADYGVPQTRQRVIIVGIRKDLDIQFEFPKQTHS-KNGNDGLKRWVSIKEAIS 200 >gi|194099739|ref|YP_002002874.1| NgoIM [Neisseria gonorrhoeae NCCP11945] gi|240013125|ref|ZP_04720038.1| NgoIM [Neisseria gonorrhoeae DGI18] gi|240015568|ref|ZP_04722108.1| NgoIM [Neisseria gonorrhoeae FA6140] gi|240114103|ref|ZP_04728593.1| NgoIM [Neisseria gonorrhoeae MS11] gi|240114658|ref|ZP_04728720.1| NgoIM [Neisseria gonorrhoeae PID18] gi|240120196|ref|ZP_04733158.1| NgoIM [Neisseria gonorrhoeae PID24-1] gi|240122493|ref|ZP_04735449.1| NgoIM [Neisseria gonorrhoeae PID332] gi|240126658|ref|ZP_04739544.1| NgoIM [Neisseria gonorrhoeae SK-92-679] gi|254492718|ref|ZP_05105889.1| modification methylase NgoBI [Neisseria gonorrhoeae 1291] gi|260441536|ref|ZP_05795352.1| NgoIM [Neisseria gonorrhoeae DGI2] gi|268600171|ref|ZP_06134338.1| modification methylase NgoBI [Neisseria gonorrhoeae MS11] gi|268600304|ref|ZP_06134471.1| modification methylase NgoBI [Neisseria gonorrhoeae PID18] gi|268602536|ref|ZP_06136703.1| modification methylase NgoBI [Neisseria gonorrhoeae PID1] gi|268681085|ref|ZP_06147947.1| modification methylase NgoBI [Neisseria gonorrhoeae PID332] gi|268685237|ref|ZP_06152099.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-92-679] gi|268685565|ref|ZP_06152427.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-93-1035] gi|193935029|gb|ACF30853.1| NgoIM [Neisseria gonorrhoeae NCCP11945] gi|226511758|gb|EEH61103.1| modification methylase NgoBI [Neisseria gonorrhoeae 1291] gi|268584302|gb|EEZ48978.1| modification methylase NgoBI [Neisseria gonorrhoeae MS11] gi|268584435|gb|EEZ49111.1| modification methylase NgoBI [Neisseria gonorrhoeae PID18] gi|268586667|gb|EEZ51343.1| modification methylase NgoBI [Neisseria gonorrhoeae PID1] gi|268621369|gb|EEZ53769.1| modification methylase NgoBI [Neisseria gonorrhoeae PID332] gi|268625521|gb|EEZ57921.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-92-679] gi|268625849|gb|EEZ58249.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-93-1035] gi|317165226|gb|ADV08767.1| NgoIM [Neisseria gonorrhoeae TCDC-NG08107] Length = 315 Score = 63.5 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + DFG+PQ+RER+YI+ F + ++ F FP P+ LG++LE D + + L + Sbjct: 142 LNTLDFGLPQKRERIYIVGF-SDNIPFYFPEPINQYRPLGELLENDRDVEPSYF--LSDT 198 Query: 61 HQKRKENNKIAG 72 ++++ Sbjct: 199 LKQKRLAALKKA 210 >gi|218902126|ref|YP_002449960.1| cytosine-specific methyltransferase NlaX [Bacillus cereus AH820] gi|218538919|gb|ACK91317.1| cytosine-specific methyltransferase NlaX [Bacillus cereus AH820] Length = 350 Score = 63.5 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 12/104 (11%) Query: 1 MKACDFG-VPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDILEEH---IDDKSTIS 54 + + ++G VPQ RER+YI+ FL + +F FP P+ + L ++ + D+K Sbjct: 153 LNSMEYGNVPQNRERIYIVGFLENELTAKFDFPAPIPLTNTLNTVINRNSSINDEKYKAF 212 Query: 55 NKLWEGHQKRKENNKIAGKG---FGYGLFF---ENSATTNTLSA 92 L E E + + + + + TL+A Sbjct: 213 YYLPEKVSFYNELQEGMTSHDTVYQWRRVYVRENKNNVCPTLTA 256 >gi|163938820|ref|YP_001643704.1| DNA-cytosine methyltransferase [Bacillus weihenstephanensis KBAB4] gi|163861017|gb|ABY42076.1| DNA-cytosine methyltransferase [Bacillus weihenstephanensis KBAB4] Length = 350 Score = 63.5 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 12/104 (11%) Query: 1 MKACDFG-VPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDILEEH---IDDKSTIS 54 + + ++G VPQ RER+YI+ FL + +F FP P+ + L ++ + D+K Sbjct: 153 LNSMEYGNVPQNRERIYIVGFLENELTAKFDFPAPIPLTNTLNTVINRNSSINDEKYKAF 212 Query: 55 NKLWEGHQKRKENNKIAGKG---FGYGLFF---ENSATTNTLSA 92 L E E + + + + + TL+A Sbjct: 213 YYLPEKVSFYNELQEGMTSHDTVYQWRRVYVRENKNNVCPTLTA 256 >gi|59802299|ref|YP_209011.1| NgoIM [Neisseria gonorrhoeae FA 1090] gi|240081825|ref|ZP_04726368.1| NgoIM [Neisseria gonorrhoeae FA19] gi|59719194|gb|AAW90599.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae FA 1090] Length = 315 Score = 63.5 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + DFG+PQ+RER+YI+ F + ++ F FP P+ LG++LE D + + L + Sbjct: 142 LNTLDFGLPQKRERIYIVGF-SDNIPFYFPEPINQYRPLGELLENDRDVEPSYF--LSDT 198 Query: 61 HQKRKENNKIAG 72 ++++ Sbjct: 199 LKQKRLAALKKA 210 >gi|193216537|ref|YP_001999779.1| cytosine-specific methyltransferase, related to HhaI [Mycoplasma arthritidis 158L3-1] gi|193001860|gb|ACF07075.1| cytosine-specific methyltransferase, related to HhaI [Mycoplasma arthritidis 158L3-1] Length = 327 Score = 63.5 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 14/104 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKP----------RLGDILEEHID 48 + + +FGVPQ+RER+Y++ F F FP P + +++ D Sbjct: 152 LNSLNFGVPQKRERIYMVCFRRDLNIKNFSFPKPFKLSTFLEDLLLSEEETSNLIINRPD 211 Query: 49 DKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + + + + + GKG + TLSA Sbjct: 212 --LVLKDIEIKNNMIKPIRIGTVGKGGQGERIYSPKGIAVTLSA 253 >gi|254411906|ref|ZP_05025682.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196181628|gb|EDX76616.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 456 Score = 63.5 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 7/80 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILE----EHIDDKSTI 53 + + DFG+PQ R+R++I+ N + F FP PLG +L D++ K Sbjct: 173 LNSYDFGLPQDRDRVFIVGIRNDIEKSKSFDFPKPLGKPIKLYDVINGIERCQFTKKKFP 232 Query: 54 SNKLWEGHQKRKENNKIAGK 73 + L++G Sbjct: 233 AEILFDGKIPAARGRFQKID 252 >gi|325912401|ref|ZP_08174796.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 143-D] gi|325475743|gb|EGC78914.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 143-D] Length = 336 Score = 63.5 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 11/103 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKL- 57 + ++G+PQ+RER+Y++ F N F FP P + + + L + + I N+ Sbjct: 152 LNPINYGIPQKRERVYMVCFRNDIKRESFVFPQPFKLNRFVENFLLPDNEVRDLIVNRTD 211 Query: 58 --------WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + GKG + TLSA Sbjct: 212 LVLNDKVNINYNAPSTIRVGTVGKGGQGERIYSPKGIAITLSA 254 >gi|317181803|dbj|BAJ59587.1| Type II DNA modification enzyme [Helicobacter pylori F57] Length = 351 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER+ ++ L +F FP P+ L D L + +S + Sbjct: 145 LNALDYGVPQIRERVILVGVLKSFKQKFHFPKPIKTHFSLKDALGDLPPIQSGENGDALG 204 Query: 60 GHQK 63 + Sbjct: 205 YLKN 208 >gi|319779706|ref|YP_004130619.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9] gi|317109730|gb|ADU92476.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9] Length = 329 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 14/104 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKS------- 51 + +CD+G+PQ R R++++ F EFKFP P + + DIL + Sbjct: 152 LNSCDYGIPQSRARIFMVAFREDLKHQEFKFPAPKNLDKYVEDILLPDSETSHLVRQRDD 211 Query: 52 ---TISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 S+ L ++ + G + + T SA Sbjct: 212 ICLYRSDPLNNVNETYRIGIVGKGGQ--GERVYSPKGLSVTFSA 253 >gi|309809622|ref|ZP_07703479.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners SPIN 2503V10-D] gi|308170103|gb|EFO72139.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners SPIN 2503V10-D] Length = 336 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 11/103 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL- 57 + ++G+PQ+RER+Y++ F N F FP P + + + L + + I N+ Sbjct: 152 LNPINYGIPQKRERVYMVCFRNDIERESFVFPQPFKLNRFVENFLLPDNEVRDLIVNRTD 211 Query: 58 --------WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + GKG + TLSA Sbjct: 212 LVLNDKVNINYNAPSTIRVGTVGKGGQGERIYSPKGIAITLSA 254 >gi|315586449|gb|ADU40830.1| possible DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A] Length = 351 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER+ ++ L +F FP P+ L D L + +S + Sbjct: 145 LNALDYGVPQIRERVILVGVLKSFKQKFHFPKPIKTHFSLKDALGDLPPIQSGENGDALG 204 Query: 60 GHQK 63 + Sbjct: 205 YLKN 208 >gi|172039424|ref|YP_001805925.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC 51142] gi|171700878|gb|ACB53859.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC 51142] Length = 729 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 37/89 (41%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFGVPQ RER+ II LN F P L L++ + + + Sbjct: 146 LNAKDFGVPQNRERIIIIGTLNKKFNFDLIDIQKNVPSLRSFLDQKGNFEYLDPKEYTLI 205 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNT 89 + +K+ + + G+ ++ NT Sbjct: 206 QEPKKQLSGLIFIGYRNKNIWKKGIRPNT 234 >gi|34451619|gb|AAQ72366.1| TspRI methylase [Thermus sp. R] Length = 431 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 + A DFGVPQ R+R++ + +EF++P P Sbjct: 215 LNAADFGVPQHRKRIFFVGVRPG-IEFRWPRPTH 247 >gi|281491829|ref|YP_003353809.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp. lactis KF147] gi|281375540|gb|ADA65046.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp. lactis KF147] Length = 351 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 10/94 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKP----RLGDILEEHIDDKSTISN 55 ++A ++G+PQ+RER++I+ N + +F F P P L +L++ D+K S+ Sbjct: 159 LRAVEYGIPQKRERVFIVGIRNDLNKKFHFADPPIQSPLDYTPLKKVLQKDFDEKYYFSD 218 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFFENSATTNT 89 + EG K K + + G + + +NT Sbjct: 219 RAVEGMLKSKMSKIMNK-----GRAQDINQPSNT 247 >gi|259500984|ref|ZP_05743886.1| modification methylase EcoRII [Lactobacillus iners DSM 13335] gi|302190566|ref|ZP_07266820.1| DNA-cytosine methyltransferase [Lactobacillus iners AB-1] gi|259167678|gb|EEW52173.1| modification methylase EcoRII [Lactobacillus iners DSM 13335] Length = 336 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 11/103 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL- 57 + ++G+PQ+RER+Y++ F N F FP P + + + L + + I N+ Sbjct: 152 LNPINYGIPQKRERVYMVCFRNDIERESFVFPQPFKLNRFVENFLLPDNEVRDLIVNRTD 211 Query: 58 --------WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + GKG + TLSA Sbjct: 212 LVLNDKVNINYNAPSTIRVGTVGKGGQGERIYSPKGIAITLSA 254 >gi|167465361|ref|ZP_02330450.1| DNA-cytosine methyltransferase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 432 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 41/126 (32%), Gaps = 36/126 (28%) Query: 1 MKACDFGVPQRRERLYIIDFLN--------------------------PSVEFKFPTPLG 34 + + +GVPQ RER++II + + F +P Sbjct: 144 LNSKFYGVPQSRERVFIICSRDVEPEAWSTEGNGVLTKAKRRLQMMGARTFNFDWPKNSE 203 Query: 35 IKPRLGDILEEHIDDKSTIS-NKLWEGHQKRKENNKI---------AGKGFGYGLFFENS 84 + RL DILE +D+K +S +K + ++ + Sbjct: 204 VTTRLRDILETEVDEKYYLSPDKTLKLLEEISSKPDSVSVIGRLDGVNGHDICKRVYSTE 263 Query: 85 ATTNTL 90 + T+ Sbjct: 264 SVAPTI 269 >gi|218439646|ref|YP_002377975.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] gi|218172374|gb|ACK71107.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] Length = 320 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A DFG+PQ+RER++I+ L + F +P L +ILE + S ++ Sbjct: 159 LNALDFGLPQKRERIFIVGCL-DPIPFIWPNSTRPFKPLQEILETQVSSSYYASEQI 214 >gi|254779148|ref|YP_003057253.1| M. Hpy99XI, type II cytosine specific DNA methyltransferase [Helicobacter pylori B38] gi|254001059|emb|CAX29005.1| M. Hpy99XI, type II cytosine specific DNA methyltransferase [Helicobacter pylori B38] Length = 348 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER+ ++ L +F FP P+ L D L + +S + Sbjct: 145 LNALDYGVPQVRERVILVGVLKRFKQKFHFPKPIKTHFSLKDALGDLPPIQSGENGDALG 204 Query: 60 GHQK 63 + Sbjct: 205 YLKN 208 >gi|317500279|ref|ZP_07958506.1| cytosine-specific methyltransferase [Lachnospiraceae bacterium 8_1_57FAA] gi|331087487|ref|ZP_08336423.1| hypothetical protein HMPREF1025_00006 [Lachnospiraceae bacterium 3_1_46FAA] gi|316898322|gb|EFV20366.1| cytosine-specific methyltransferase [Lachnospiraceae bacterium 8_1_57FAA] gi|330410467|gb|EGG89898.1| hypothetical protein HMPREF1025_00006 [Lachnospiraceae bacterium 3_1_46FAA] Length = 410 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLGDILEEHID 48 + A DFGVPQ+RERL + N V F FP KP L DIL + + Sbjct: 227 LNAWDFGVPQKRERLITVGIRNDLVGKVSFSFPKEHNYKPVLRDILLDCPE 277 >gi|85703012|ref|ZP_01034116.1| DNA cytosine methyltransferase M.NgoMIII [Roseovarius sp. 217] gi|85671940|gb|EAQ26797.1| DNA cytosine methyltransferase M.NgoMIII [Roseovarius sp. 217] Length = 387 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + ++GVPQRRER++++ F + +E+ FP P + +L D+ Sbjct: 180 LNSANYGVPQRRERVFLVGFRADTGIEWHFPKPTHSR---DALLWSQWRDEVYWDLHRVA 236 Query: 60 GHQKRKENNKIAGKG 74 + R E + Sbjct: 237 -RKNRPEGGAAKARS 250 >gi|158320884|ref|YP_001513391.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs] gi|158141083|gb|ABW19395.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs] Length = 329 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A DF VPQ R+R++ I F +FKFP P+ + L D + + + +K Sbjct: 145 LNANDFQVPQDRKRVFYIGFRKDLGIADFKFPKPIEPRLTLKDAIWDLRETAIPALDK 202 >gi|208434405|ref|YP_002266071.1| type II DNA modification enzyme [Helicobacter pylori G27] gi|208432334|gb|ACI27205.1| type II DNA modification enzyme [Helicobacter pylori G27] Length = 348 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER+ ++ L +F FP P+ L D L + +S + Sbjct: 145 LNALDYGVPQIRERVILVGTLKRFKQKFHFPKPIKTHFSLKDALGDLPPIQSGENGDALG 204 Query: 60 GHQK 63 + Sbjct: 205 YLKN 208 >gi|167043721|gb|ABZ08413.1| putative C-5 cytosine-specific DNA methylase [uncultured marine crenarchaeote HF4000_APKG3B16] Length = 377 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 10/98 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+G+PQ R+R++I+ EF+FP P + + K S + Sbjct: 167 LDAKDYGLPQDRQRIFIVGVRKDLEYEFEFPKPTHGPGLKPYVTMKDYGIKDIHSLET-- 224 Query: 60 GHQKRKENNKIAGKGFGYGLFFEN-----SATTNTLSA 92 + ++ FG N + + T+ A Sbjct: 225 --EVFRDGKSHGVDYFGARYMSRNRLRKWNDVSFTIPA 260 >gi|160947479|ref|ZP_02094646.1| hypothetical protein PEPMIC_01413 [Parvimonas micra ATCC 33270] gi|158446613|gb|EDP23608.1| hypothetical protein PEPMIC_01413 [Parvimonas micra ATCC 33270] Length = 348 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A D+GVPQ R+R++ + F V+F+ P P K D + + D K Sbjct: 150 LNASDYGVPQDRKRVFYVGFRKDLKVKFEPPKPYETKLTFKDTIFDLKDSAIPALEK 206 >gi|6272296|gb|AAF06073.1|AF072715_4 putative methylase [Mycoplasma mycoides subsp. capri] Length = 390 Score = 62.7 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 37/102 (36%), Gaps = 12/102 (11%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 + D+G Q RER++ I +L+ F FP PL K + I++ D K N L + Sbjct: 230 NSTDYGSCQNRERVFCISYLDKQKNFTFPKPLITKKEIDSIIKNDDDMKEC--NHLLKYL 287 Query: 62 ----------QKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + +K + TL+A Sbjct: 288 NNDFKPTQNNITKTRLDKKYTNFNSEAYVYLAKGYGPTLTAS 329 >gi|229824483|ref|ZP_04450552.1| hypothetical protein GCWU000282_01806 [Catonella morbi ATCC 51271] gi|229786084|gb|EEP22198.1| hypothetical protein GCWU000282_01806 [Catonella morbi ATCC 51271] Length = 406 Score = 62.7 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 45/100 (45%), Gaps = 8/100 (8%) Query: 1 MKACDFG-VPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDD--KSTISN 55 + D G +PQ RER+YI+ F + F+FP + + +L D+++ HI + K ++ Sbjct: 156 LNGKDHGNIPQNRERIYIVGFRDKQAFDAFQFPESVDLTTKLDDVIDFHIAENAKYYYTS 215 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 +++ + + + + S TL+A Sbjct: 216 DKQRFYRELADTITSQETVYQWRRQYVRENKSGVVPTLTA 255 >gi|296491874|ref|YP_003662339.1| putative DNA (cytosine-5-)-methyltransferase [Xenorhabdus nematophila ATCC 19061] gi|289176759|emb|CBJ92924.1| putative DNA (cytosine-5-)-methyltransferase [Xenorhabdus nematophila ATCC 19061] Length = 575 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 5/99 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL---GDILEEHIDDKSTISNKL 57 + +FGV +RR+RL ++ + F+ ++ + +ILE D K Sbjct: 315 LDGNEFGVIERRKRLCVVALSHGIDGFELEKVQPVRTKESRIHEILEPVPLDSERW--KS 372 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 ++ ++ +K AGKGF L + T+ Y K Sbjct: 373 FDYLADKELRDKAAGKGFSRQLLTGDDEYCGTIGKDYAK 411 >gi|332362221|gb|EGJ40021.1| DNA methylase [Streptococcus sanguinis SK1056] Length = 412 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 8/100 (8%) Query: 1 MKACDFG-VPQRRERLYIIDF--LNPSVEFKFPTPLGIKPRLGDILEE--HIDDKSTISN 55 + D+G +PQ RER+YI+ F F+FP + + L D++ +D+ Sbjct: 164 LNGKDYGNIPQNRERIYIVGFDTKEAYDLFEFPEEIKLTTTLQDVINFGDQLDEVYYYRE 223 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + + K + + + + TL+A Sbjct: 224 GKQNFYDQLKFEVTSQDTVYQWRRQYVRENKNGVVPTLTA 263 >gi|314055145|ref|YP_004063483.1| putative cytosine-specific methyltransferase [Ostreococcus tauri virus 2] gi|313575036|emb|CBI70049.1| putative cytosine-specific methyltransferase [Ostreococcus tauri virus 2] Length = 349 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 32/58 (55%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 +KA + GVPQ+RERL+I+ + F+FP P + L DIL ++ + +L Sbjct: 152 LKAHEHGVPQKRERLFIVGSRDADFTFEFPEPSNNEVGLKDILRFDMEGALQVPKELI 209 >gi|295110826|emb|CBL24779.1| DNA-methyltransferase (dcm) [Ruminococcus obeum A2-162] Length = 312 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 35/98 (35%), Gaps = 5/98 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRL---GDILEEHIDDKSTISNK 56 + A D+GVPQ R+R+ II N + E+ +P P K + + Sbjct: 142 LNAADYGVPQTRQRVIIIGVRNDINFEYIYPLPTNSKNGKDGLPEWISVSEAMAHIPDPD 201 Query: 57 LWEGHQKRK-ENNKIAGKGFGYGLFFENSATTNTLSAR 93 L K+ G+ + T++AR Sbjct: 202 LPNDLPNHVYSKYKLNFNGYLGHRPLDPDKPAPTVTAR 239 >gi|284051619|ref|ZP_06381829.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca] Length = 443 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 7/80 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLGIKPRLGDIL----EEHIDDKSTI 53 + A DFG+PQ R+R++I+ F+FP PL P+L + + +E + K Sbjct: 160 LNASDFGLPQDRDRVFIVGIRRDINQGQNFQFPQPLNQHPQLFNFVEGVSQEAVIKKKFS 219 Query: 54 SNKLWEGHQKRKENNKIAGK 73 L+ H Sbjct: 220 PQVLFGNHIPPARGRFQKND 239 >gi|317127845|ref|YP_004094127.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] gi|315472793|gb|ADU29396.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] Length = 363 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID-DKSTISNKLWE 59 + A D+GVPQ R R++ + L+ + F+FP D L + +K S+ +E Sbjct: 152 LNAADYGVPQHRHRVFFVGVLDGA--FEFPRKKNEVISTKDALSDLPSLEKFEGSDVEFE 209 Query: 60 GH 61 H Sbjct: 210 YH 211 >gi|282899425|ref|ZP_06307392.1| DNA-cytosine methyltransferase [Cylindrospermopsis raciborskii CS-505] gi|281195689|gb|EFA70619.1| DNA-cytosine methyltransferase [Cylindrospermopsis raciborskii CS-505] Length = 384 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 4/60 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A ++G+PQRRER++I+ ++ + FP P +L + Sbjct: 176 LDAANYGIPQRRERVFIVGIRQDLNINWSFPQPSHSYDS---LLWSQFVSYDYWERHQIK 232 >gi|291570812|dbj|BAI93084.1| cytosine-specific DNA methyltransferase [Arthrospira platensis NIES-39] Length = 443 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 7/80 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLGIKPRLGDIL----EEHIDDKSTI 53 + A DFG+PQ R+R++I+ F+FP PL P+L + + +E + K Sbjct: 160 LNASDFGLPQDRDRVFIVGIRRDINQGQNFQFPQPLNQHPQLFNFVEGVSQEAVIKKKFS 219 Query: 54 SNKLWEGHQKRKENNKIAGK 73 L+ H Sbjct: 220 PQVLFGNHIPPARGRFQKND 239 >gi|317009105|gb|ADU79685.1| type II DNA modification [Helicobacter pylori India7] Length = 348 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER+ ++ L +F FP P+ L D L + +S + Sbjct: 145 LNALDYGVPQIRERVILVGVLKSFKQKFYFPKPIKTHFSLKDALGDLPPIQSGENGDALG 204 Query: 60 GHQK 63 + Sbjct: 205 YLKN 208 >gi|328946253|gb|EGG40397.1| modification methylase Sau96I [Streptococcus sanguinis SK1087] Length = 333 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 15/100 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A D+GV Q+RER+ ++ N + F++P P KP L DIL + + + Sbjct: 151 LNAWDYGVAQKRERMIMVGIRNDLTDKITFEYPEPHDYKPVLKDILLD-------CPSSV 203 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKD 97 + + K+ GY + ++ Y K Sbjct: 204 GAQYSEYKKKIFELVPPGGYWRDIPEN-----IAKEYMKS 238 >gi|325269502|ref|ZP_08136118.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM 16608] gi|324988121|gb|EGC20088.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM 16608] Length = 393 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 38/91 (41%), Gaps = 14/91 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK---- 56 + D+GVPQ R+R+Y I F + +FK+P P+ + + D L++ + + + K Sbjct: 180 LNGKDYGVPQSRDRIYCIGFKKET-DFKYPAPIPLVKTVYDYLQKKFEKRYLLRQKGVNF 238 Query: 57 ---LWEGHQKRKEN------NKIAGKGFGYG 78 + + + + F + Sbjct: 239 ITRSINYQKSYTQINGDILLCQKRNQQFNWH 269 >gi|322376119|ref|ZP_08050628.1| DNA modification methylase [Streptococcus sp. C300] gi|321278887|gb|EFX55931.1| DNA modification methylase [Streptococcus sp. C300] Length = 406 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 8/100 (8%) Query: 1 MKACDFG-VPQRRERLYIIDF--LNPSVEFKFPTPLGIKPRLGDILEE--HIDDKSTISN 55 + D+G +PQ RER+YI+ F F+FP + + L D++ +D+ Sbjct: 158 LNGKDYGNIPQNRERIYIVGFDTKEAYDSFEFPEEIKLTTSLQDVINFGDKLDEVYYYRE 217 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + + K + + + + TL+A Sbjct: 218 GKQNFYDQLKFEVTSQDTVYQWRRQYVRENKNGVVPTLTA 257 >gi|261840146|gb|ACX99911.1| cytosine-specific methyltransferase [Helicobacter pylori 52] Length = 343 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDD 49 + A + GV Q+RERL+I+ + F FP PL K L DIL + Sbjct: 151 LNASNHGVAQKRERLFIVGIRKDLNRSFNFPKPLKNKKVLKDILLDVPKS 200 >gi|291618717|ref|YP_003521459.1| HsdRM [Pantoea ananatis LMG 20103] gi|291153747|gb|ADD78331.1| HsdRM [Pantoea ananatis LMG 20103] Length = 313 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 34/101 (33%), Gaps = 23/101 (22%) Query: 1 MKACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLG--------IKPRLGDILEEHIDDKS 51 + A D+GVPQ R+R++I+ N +VE+ FP P L E + Sbjct: 141 LNAMDYGVPQERKRIFIVGIKDNINVEYSFPEPTHGIGGHDFVTIKDAISHLPEWPTGEF 200 Query: 52 TISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 W + + N + T+ A Sbjct: 201 YDQGFHWYYMSRNRRQNWEQ--------------VSKTIVA 227 >gi|12229862|sp|Q59603|MTB1_NEIGO RecName: Full=Modification methylase NgoBI; Short=M.NgoBI; AltName: Full=Cytosine-specific methyltransferase NgoBI; Short=M.NgoI gi|5924404|gb|AAB03206.2| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae] Length = 317 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + DFG+PQ+RER+YI+ F + ++ F FP P+ LG++LE D + + L + Sbjct: 142 LNTLDFGLPQKRERIYIVGF-SDNIPFYFPEPINQYRPLGELLENDRDVEPSYF--LSDT 198 Query: 61 HQKRKENNKIAG 72 ++++ Sbjct: 199 LKQKRLAALKKA 210 >gi|9622224|gb|AAF89681.1| cytosine-specific methyltransferase [Bacillus sp. LU11] Length = 365 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 + A D+GVPQRR+R++I+ ++F FP P + Sbjct: 146 LNAADYGVPQRRKRIFIVGTREG-IKFNFPLPTHNEK 181 >gi|322383485|ref|ZP_08057261.1| hypothetical protein PL1_3347 [Paenibacillus larvae subsp. larvae B-3650] gi|321152224|gb|EFX45054.1| hypothetical protein PL1_3347 [Paenibacillus larvae subsp. larvae B-3650] Length = 425 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 36/126 (28%) Query: 1 MKACDFGVPQRRERLYIIDFLN--------------------------PSVEFKFPTPLG 34 + + +GVPQ RER++I+ + + F +P Sbjct: 144 LNSKFYGVPQSRERVFIVCSRDVEPEAWSIEGNGVLAKAKRRLQAMGARTFNFDWPKNGE 203 Query: 35 IKPRLGDILEEHIDDKSTISN----KLWEGHQKRKENNK------IAGKGFGYGLFFENS 84 + RL DILE +D+K +S KL E + ++ + + Sbjct: 204 VMTRLRDILEPEVDEKYYLSPDKTLKLSEEISSKSDSVRVVGRLAEVNGHDICKRVYSAE 263 Query: 85 ATTNTL 90 + T+ Sbjct: 264 SVAPTI 269 >gi|77409601|ref|ZP_00786278.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae COH1] gi|77171795|gb|EAO74987.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae COH1] Length = 333 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILEEHIDD 49 + A D+GV Q+RER+ ++ N V F++P P KP L DIL + Sbjct: 151 LNAWDYGVAQKRERMIMVGIRNDLVNMTSFEYPKPHDYKPVLRDILLDCPPS 202 >gi|257061088|ref|YP_003138976.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] gi|256591254|gb|ACV02141.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] Length = 331 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 2/78 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFGVPQ RER+ II + +F P+L + L++ + S + Sbjct: 146 LNAKDFGVPQHRERIVIIATRHKKFDFNLIQQQKPIPKLREFLDKTGNFDYLHSKEY--T 203 Query: 61 HQKRKENNKIAGKGFGYG 78 + GY Sbjct: 204 LIDNPKEQLSGLIFVGYR 221 >gi|126740127|ref|ZP_01755817.1| DNA modification methylase M.NGOI [Roseobacter sp. SK209-2-6] gi|126718946|gb|EBA15658.1| DNA modification methylase M.NGOI [Roseobacter sp. SK209-2-6] Length = 319 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTP-LGIKPRLGDILEEHIDDKSTISNKLW 58 + A D+GVPQ R R+ I+ S +F +P P +G+ L + + ++ + W Sbjct: 145 LNASDYGVPQLRPRVAIVALRKEFSGQFNWPEPLPHNPRTVGETLLDLMQERGWRGAEAW 204 Query: 59 E 59 Sbjct: 205 A 205 >gi|308071385|ref|YP_003872990.1| Modification methylase AquI alpha subunit (cytosine-specific methyltransferase AquI alpha subunit) [Paenibacillus polymyxa E681] gi|305860664|gb|ADM72452.1| Modification methylase AquI alpha subunit (Cytosine-specific methyltransferase AquI alpha subunit) [Paenibacillus polymyxa E681] Length = 366 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 13/82 (15%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIK------------PRLGDILEEHID 48 A D+GVPQ+RER++++ + F FP P + + D L + Sbjct: 173 NAADYGVPQKRERVFLVGMRRDLNRTFLFPEPTHNELGTDGKKRWVTVRDVFDRLGNIVH 232 Query: 49 DKSTISNKLWEGHQKRKENNKI 70 S + Sbjct: 233 HHVNYSQDRLNYMRMIPIGGGN 254 >gi|331270911|ref|YP_004385622.1| putative cytosine-specific DNA methylotransferase [Clostridium botulinum BKT015925] gi|329127303|gb|AEB77247.1| putative cytosine-specific DNA methylotransferase [Clostridium botulinum BKT015925] Length = 318 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 2/64 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEF--KFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 M D+G+P R RLYI+ +F KFPT + +K + D+LE+ ++DK +++K++ Sbjct: 151 MNTSDYGLPHTRRRLYIVGQRKDLGDFDYKFPTEIELKLNVQDLLEKDVNDKYYLTDKMY 210 Query: 59 EGHQ 62 + Sbjct: 211 KTVM 214 >gi|170680813|ref|YP_001746263.1| DNA-cytosine methyltransferase family protein [Escherichia coli SMS-3-5] gi|307315390|ref|ZP_07594959.1| DNA-cytosine methyltransferase [Escherichia coli W] gi|33413740|gb|AAN28260.1| Mth [Enterobacteria phage WPhi] gi|170518531|gb|ACB16709.1| DNA-cytosine methyltransferase family protein [Escherichia coli SMS-3-5] gi|306905264|gb|EFN35809.1| DNA-cytosine methyltransferase [Escherichia coli W] gi|315063217|gb|ADT77544.1| DNA cytosine methylase [Escherichia coli W] gi|323380718|gb|ADX52986.1| DNA-cytosine methyltransferase [Escherichia coli KO11] Length = 312 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 32/101 (31%), Gaps = 11/101 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLG-----IKPRLGDILEEH---IDDKS 51 + A +GV Q R+R++I+ + +KFP P + D + + Sbjct: 141 LNASHYGVSQDRKRIFIVGIRKDYGITYKFPKPTHGDGLTPYSTIRDAIGHMPVWPVGEF 200 Query: 52 TISNKLWEGHQKRKENNKIAGKGFGYGLFF--ENSATTNTL 90 ++ W + + + + TL Sbjct: 201 YDADFHWYYLSRNRRQDWDQISKTIVANPRHMPLHPISPTL 241 >gi|317010732|gb|ADU84479.1| type II DNA modification (methyltransferase) [Helicobacter pylori SouthAfrica7] Length = 348 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER+ ++ L +F FP P + L D L + +S + Sbjct: 145 LNALDYGVPQMRERVILVGVLKSFKQKFYFPKPTKMHFSLKDALGDLPPIQSGENGDALG 204 Query: 60 GHQK 63 + Sbjct: 205 YLKN 208 >gi|291549830|emb|CBL26092.1| DNA-methyltransferase (dcm) [Ruminococcus torques L2-14] Length = 410 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILEEHID 48 + A D+GVPQ+RERL I N VE F FP KP L DIL + + Sbjct: 227 LNAWDYGVPQKRERLITIGIRNDLVEKTSFTFPKEQEYKPVLRDILLDCPE 277 >gi|261837889|gb|ACX97655.1| type II m5C methylase [Helicobacter pylori 51] Length = 348 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER+ ++ L +F FP P+ L D L + +S + Sbjct: 145 LNALDYGVPQIRERVILVGTLKSFKQKFHFPKPIKAHFSLKDALGDLPPIQSGENGDALG 204 Query: 60 GHQK 63 + Sbjct: 205 YLKN 208 >gi|329769727|ref|ZP_08261128.1| hypothetical protein HMPREF0433_00892 [Gemella sanguinis M325] gi|328838089|gb|EGF87707.1| hypothetical protein HMPREF0433_00892 [Gemella sanguinis M325] Length = 406 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 8/100 (8%) Query: 1 MKACDFG-VPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDILEEHIDDK--STISN 55 + D+G +PQ RER+YI+ FL +F+FP + ++ +L DI++ I +K + Sbjct: 155 LNGKDYGNIPQNRERIYIVGFLEKESYDKFEFPNEIKLETKLSDIIDFDIKEKEIYYYRD 214 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + K K+ + + + S L+A Sbjct: 215 GKQPFYDKLKDKIISQNTVYQWRRQYVRENKSGVVPALTA 254 >gi|254804105|ref|YP_003082326.1| putative type II DNA modification methyltransferase [Neisseria meningitidis alpha14] gi|254667647|emb|CBA03458.1| putative type II DNA modification methyltransferase [Neisseria meningitidis alpha14] Length = 315 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + DFG+PQ+RER+YII F + ++ F FP P+ LG++LE D + + L + Sbjct: 142 LNTLDFGLPQKRERIYIIGF-SDNIPFYFPEPINQYRPLGELLENDRDVEPSYF--LSDA 198 Query: 61 HQKRKENNKIAG 72 ++++ Sbjct: 199 LKQKRLAALKKA 210 >gi|57506146|ref|ZP_00372067.1| cytosine specific DNA methyltransferase (DDEM) [Campylobacter upsaliensis RM3195] gi|57015541|gb|EAL52334.1| cytosine specific DNA methyltransferase (DDEM) [Campylobacter upsaliensis RM3195] Length = 316 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 6/94 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A + VPQ R+R+ II E FP PL I+P+ IL + I D ++ Sbjct: 143 LNANAYAVPQNRKRVIIIGRRKDIKREIDFPKPLNIEPK---ILFQAIGDLPKDYDENIS 199 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 H +KI G+ T++ R Sbjct: 200 NHTG--STHKIRINGYIGNRALSWDKPAPTITGR 231 >gi|317180646|dbj|BAJ58432.1| Type II DNA modification enzyme [Helicobacter pylori F32] Length = 348 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER+ ++ L +F FP P+ L D L + +S + Sbjct: 145 LNALDYGVPQIRERVILVGALKSFKQKFHFPKPIKTHFSLKDALGDLPPIQSGENGDALG 204 Query: 60 GHQK 63 + Sbjct: 205 YLKN 208 >gi|229060735|ref|ZP_04198090.1| Modification methylase Eco47II [Bacillus cereus AH603] gi|228718382|gb|EEL70014.1| Modification methylase Eco47II [Bacillus cereus AH603] Length = 198 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 39/115 (33%), Gaps = 15/115 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK--- 56 + A F V Q R+R++I+ N +V F FPT + D + + + S + Sbjct: 35 LDAVMFEVAQHRKRVFIVGVRNDMNVSFNFPTGISAVVTPRDAIGDLPSPDTIKSREKVL 94 Query: 57 --------LWEGHQKRKENNK---IAGKGFGYGLFFENSATTNTLSARYYKDGSE 100 W + + F + T+++ KDG E Sbjct: 95 GTFPKHTATWTSPTPERILDLITNPKPNQFNGVRKLSWDQPSYTITSHIAKDGRE 149 >gi|296126560|ref|YP_003633812.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563] gi|296018376|gb|ADG71613.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563] Length = 311 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 9/100 (9%) Query: 1 MKACDF-GVPQRRERLYIIDFLNPSV----EFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + + ++ +PQ RER++I F V FKFP P+ + + D ++ D N Sbjct: 141 LNSAEYSNIPQNRERIFIAAFSKEKVCSYSNFKFPEPVELTKTIHDFIDHEKQDDIYYYN 200 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + ++ EN + + + S TL+A Sbjct: 201 ST-KYYKIFNENIINKDTVYQWRRHYVRENKSNLCPTLTA 239 >gi|269121452|ref|YP_003309629.1| DNA-cytosine methyltransferase [Sebaldella termitidis ATCC 33386] gi|268615330|gb|ACZ09698.1| DNA-cytosine methyltransferase [Sebaldella termitidis ATCC 33386] Length = 372 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTIS-NKLWE 59 + A ++ +PQ RERL+ + L+ V++ FP P + L D+LE+ +D+K I+ K Sbjct: 150 LNALNYEIPQNRERLFCLSILDDKVKYNFPGPKKLNILLKDLLEKEVDEKYFINEEKTKA 209 Query: 60 GHQKRKENNKI 70 +K K+ Sbjct: 210 FIEKYKDKILE 220 >gi|315653956|ref|ZP_07906872.1| modification methylase EcoRII [Lactobacillus iners ATCC 55195] gi|315488652|gb|EFU78298.1| modification methylase EcoRII [Lactobacillus iners ATCC 55195] Length = 336 Score = 61.9 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 11/103 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKL- 57 + ++G+PQ+RER+Y++ F N F FP P + + + L + + I N+ Sbjct: 152 LNPINYGIPQKRERVYMVCFRNDIKRESFVFPQPFKLNRFVENFLLPDNEVRDLIVNRTD 211 Query: 58 --------WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + GKG + TLSA Sbjct: 212 LVLNDKVNIHYNSPSTIRVGTVGKGGQGERIYSPKGIAITLSA 254 >gi|171920707|ref|ZP_02931926.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|185179015|ref|ZP_02964765.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024024|ref|ZP_02996783.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518336|ref|ZP_03003849.1| cytosine-specific methyltransferase NlaX [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524309|ref|ZP_03004347.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198273488|ref|ZP_03206024.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|225550923|ref|ZP_03771872.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551062|ref|ZP_03772008.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903447|gb|EDT49736.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209104|gb|EDU06147.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188019052|gb|EDU57092.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188997975|gb|EDU67072.1| cytosine-specific methyltransferase NlaX [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195660089|gb|EDX53469.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198250008|gb|EDY74788.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|225378877|gb|EEH01242.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225380077|gb|EEH02439.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 319 Score = 61.9 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 6/98 (6%) Query: 1 MKACDFG-VPQRRERLYIIDF--LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + D+G VPQ RER+YI+ F FK+P P+ + + D+++ + Sbjct: 146 LNTMDYGNVPQNRERIYIVGFLSKKAYEAFKYPCPITLTNTIRDVIDFNDKKLEKYYYNN 205 Query: 58 WEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + + K + + + S TL+A Sbjct: 206 SKYYSLLKPIMTKQDTIYQWRRVYCRENKSNVCPTLTA 243 >gi|317179147|dbj|BAJ56935.1| Type II DNA modification enzyme [Helicobacter pylori F30] Length = 351 Score = 61.9 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER+ ++ L +F FP P+ L D L + +S + Sbjct: 145 LNALDYGVPQIRERVILVGALKSFKQKFHFPKPIKTHFSLKDALGDLPPIQSGENGDALG 204 Query: 60 GHQK 63 + Sbjct: 205 YLKN 208 >gi|195867949|ref|ZP_03079946.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|195660345|gb|EDX53605.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] Length = 319 Score = 61.9 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 6/98 (6%) Query: 1 MKACDFG-VPQRRERLYIIDF--LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + D+G VPQ RER+YI+ F FK+P P+ + + D+++ + Sbjct: 146 LNTMDYGNVPQNRERIYIVGFLSKKAYEAFKYPCPITLTNTIRDVIDFNDKKLEKYYYNN 205 Query: 58 WEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + + K + + + S TL+A Sbjct: 206 SKYYSLLKPIMTKQDTIYQWRRVYCRENKSNVCPTLTA 243 >gi|170077805|ref|YP_001734443.1| Type II cytosine-5 DNA methyltransferase [Synechococcus sp. PCC 7002] gi|462645|sp|P34882|MTAA_SYNP2 RecName: Full=Modification methylase AquI subunit alpha; Short=M.AquI subunit alpha; Short=M.AquiA; AltName: Full=Cytosine-specific methyltransferase AquI subunit alpha gi|2126509|pir||I39659 modification methylase AquI, alpha protein - Synechococcus sp. (PCC 7002) gi|142180|gb|AAA22067.1| M.AquI alpha protein [Synechococcus sp. PCC 7002] gi|169885474|gb|ACA99187.1| DNA-cytosine methyltransferase [Synechococcus sp. PCC 7002] Length = 248 Score = 61.9 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 + A DFGVPQ RER++I+ F+FP P Sbjct: 161 LNAADFGVPQFRERVFIVGNRLGK-TFQFPEPTH 193 >gi|313667088|gb|ADR72987.1| M2.BsmFI [Geobacillus stearothermophilus] Length = 365 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 + A D+GVPQRR+R++I+ V+F FP P + Sbjct: 146 LNAADYGVPQRRKRIFIVGTREG-VKFNFPLPTHNEK 181 >gi|254412384|ref|ZP_05026158.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196180694|gb|EDX75684.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 221 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + + D+GV Q RER++I+ F+FP P K L +K N L Sbjct: 161 LNSADYGVAQLRERVFIVATR-IKPSFRFPLPTHSKFDSQLSLFPPPREKPLTINALI 217 >gi|79835495|gb|ABB52098.1| Mod [Arthrospira platensis] Length = 412 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 7/80 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLGIKPRLGDIL----EEHIDDKSTI 53 + A DFG+PQ R+R++I+ F+FP PL P+L + + +E + K Sbjct: 160 LNASDFGLPQDRDRVFIVGIRRDINQGQNFQFPQPLNQHPQLFNFVEGVSQEAVIKKKFS 219 Query: 54 SNKLWEGHQKRKENNKIAGK 73 L+ H Sbjct: 220 PQVLFGNHIPPARGRFQKND 239 >gi|331091845|ref|ZP_08340677.1| hypothetical protein HMPREF9477_01320 [Lachnospiraceae bacterium 2_1_46FAA] gi|330402744|gb|EGG82311.1| hypothetical protein HMPREF9477_01320 [Lachnospiraceae bacterium 2_1_46FAA] Length = 410 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLGDILEEHID 48 + A DFGVPQ+RERL + N V F FP KP L D+L + + Sbjct: 227 LNAWDFGVPQKRERLITVGIRNDLVGKVSFSFPKEHDYKPVLRDVLLDCPE 277 >gi|307710826|ref|ZP_07647254.1| DNA-cytosine methyltransferase family protein [Streptococcus mitis SK321] gi|307617432|gb|EFN96604.1| DNA-cytosine methyltransferase family protein [Streptococcus mitis SK321] Length = 406 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 8/100 (8%) Query: 1 MKACDFG-VPQRRERLYIIDF--LNPSVEFKFPTPLGIKPRLGDILEE--HIDDKSTISN 55 + D+G +PQ RER+YI+ F F+FP + + L D++ +D+ Sbjct: 158 LNGKDYGNIPQNRERIYIVGFDTKEAYDLFEFPEEIKLTTSLQDVINFGDKLDEVYYYRE 217 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + + K + + + + TL+A Sbjct: 218 GKQNFYDQLKFEVASQDTVYQWRRQYVRENKNGVVPTLTA 257 >gi|320326171|gb|EFW82226.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea str. B076] Length = 404 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIK 36 A D+GVPQ+RER+++I F + VE+ FP P Sbjct: 182 NAADYGVPQKRERVFLIGFRDDLEVEWSFPAPTHSY 217 >gi|261839303|gb|ACX99068.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori 52] Length = 348 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER+ ++ L +F FP P+ L D L + +S + Sbjct: 145 LNALDYGVPQIRERVILVGALKSFKQKFHFPKPIKTHFSLKDALGDLPPIQSGENGDALG 204 Query: 60 GHQK 63 + Sbjct: 205 YLKN 208 >gi|217033040|ref|ZP_03438509.1| hypothetical protein HPB128_193g7 [Helicobacter pylori B128] gi|298736593|ref|YP_003729119.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] gi|216945239|gb|EEC23921.1| hypothetical protein HPB128_193g7 [Helicobacter pylori B128] gi|298355783|emb|CBI66655.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] Length = 351 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER+ ++ L +F FP P+ L D L + +S + Sbjct: 145 LNALDYGVPQIRERVILVGALKSFKQKFHFPKPIKTHFSLKDALGDLPPIQSGENGDALG 204 Query: 60 GHQK 63 + Sbjct: 205 YLKN 208 >gi|322392562|ref|ZP_08066022.1| DNA methylase [Streptococcus peroris ATCC 700780] gi|321144554|gb|EFX39955.1| DNA methylase [Streptococcus peroris ATCC 700780] Length = 406 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 8/100 (8%) Query: 1 MKACDFG-VPQRRERLYIIDF--LNPSVEFKFPTPLGIKPRLGDILEE--HIDDKSTISN 55 + D+G +PQ RER+YI+ F F+FP + + L D++ +D+ Sbjct: 158 LNGKDYGNIPQNRERIYIVGFDTKEAYDLFEFPEEIKLTTSLQDVINFGDQLDEVYYYRE 217 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + + K + + + + TL+A Sbjct: 218 GKQNFYDQLKFEVTSQDTVYQWRRQYVRENKNGVVPTLTA 257 >gi|218247578|ref|YP_002372949.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] gi|218168056|gb|ACK66793.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] Length = 727 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 2/78 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFGVPQ RER+ II + +F P+L + L++ + + Sbjct: 146 LNAKDFGVPQHRERIVIIATRHKKFDFNLIQQQKPIPKLREFLDKTGNFDYLHPKEY--T 203 Query: 61 HQKRKENNKIAGKGFGYG 78 + GY Sbjct: 204 LIDNPKEQLSGLIFVGYR 221 >gi|224796590|ref|YP_002641667.1| DNA-cytosine methyltransferase [Borrelia burgdorferi 64b] gi|223929176|gb|ACN23896.1| DNA-cytosine methyltransferase [Borrelia burgdorferi 64b] gi|312149869|gb|ADQ29935.1| DNA-cytosine methyltransferase [Borrelia burgdorferi N40] Length = 324 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 39/103 (37%), Gaps = 11/103 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-----EFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + A +FGVPQ RER+Y + ++ P K L DILE+ + I Sbjct: 155 LNASNFGVPQARERVYFACLRKDTGTSEKLKYSKPKETFKKIYLEDILEKDVPKSMYIDR 214 Query: 56 KLWE------GHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 K E ++ R I KG + TLSA Sbjct: 215 KDIEITKKIPTNELRPIRIGIVNKGGQGERIYSPKGHAITLSA 257 >gi|254475144|ref|ZP_05088530.1| DNA-cytosine methyltransferase [Ruegeria sp. R11] gi|214029387|gb|EEB70222.1| DNA-cytosine methyltransferase [Ruegeria sp. R11] Length = 324 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTP-LGIKPRLGDILEEHIDDKSTISNKLW 58 + A D+GVPQ R R+ I+ S +F +P P P +G+ L + + ++ + W Sbjct: 145 LNASDYGVPQLRPRVAIVALRKEFSGQFAWPDPLPHNPPTVGETLLDLMQERGWRGAEAW 204 Query: 59 E 59 Sbjct: 205 A 205 >gi|167630879|ref|YP_001681378.1| DNA-cytosine methyltransferase [Heliobacterium modesticaldum Ice1] gi|167593619|gb|ABZ85367.1| DNA-cytosine methyltransferase [Heliobacterium modesticaldum Ice1] Length = 319 Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A D+GVPQ R R+ + N +F FPT + P +G+IL + + I K W Sbjct: 145 LNASDYGVPQLRPRVVFVAIRNDLAADFTFPTEIMHAPTVGEILGDLMGANGWIGVKQW 203 >gi|290343528|ref|YP_003494895.1| hypothetical protein OTV1_055 [Ostreococcus tauri virus 1] gi|260160943|emb|CAY39643.1| hypothetical protein OTV1_055 [Ostreococcus tauri virus 1] Length = 351 Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 32/59 (54%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 +KA + GVPQ+RERL+I+ + F FP P L DIL+ ++ + +L + Sbjct: 154 LKAHEHGVPQKRERLFIVGSRDVDFTFDFPEPSANDVGLKDILKFDMEGALKVPKELID 212 >gi|219724141|ref|YP_002477179.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Borrelia burgdorferi 156a] gi|225575842|ref|YP_002724642.1| DNA-cytosine methyltransferase [Borrelia burgdorferi 118a] gi|219693145|gb|ACL34349.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Borrelia burgdorferi 156a] gi|225546742|gb|ACN92742.1| DNA-cytosine methyltransferase [Borrelia burgdorferi 118a] Length = 311 Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 39/103 (37%), Gaps = 11/103 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-----EFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + A +FGVPQ RER+Y + ++ P K L DILE+ + I Sbjct: 142 LNASNFGVPQARERVYFACLRKDTGTSEKLKYSKPKETFKKIYLEDILEKDVPKSMYIDR 201 Query: 56 KLWE------GHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 K E ++ R I KG + TLSA Sbjct: 202 KDIEITKKIPTNELRPIRIGIVNKGGQGERIYSPKGHAITLSA 244 >gi|118601986|ref|YP_908686.1| cytosine-specific DNA methylase [Photobacterium damselae subsp. piscicida] gi|118614724|ref|YP_908507.1| cytosine-specific DNA methylase [Photobacterium damselae subsp. piscicida] gi|134044487|ref|YP_001101821.1| C-5 cytosine-specific DNA methylase [Yersinia ruckeri] gi|134044859|ref|YP_001102203.1| C-5 cytosine-specific DNA methylase [Yersinia pestis biovar Orientalis str. IP275] gi|134047248|ref|YP_001101999.1| C-5 cytosine-specific DNA methylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|165937989|ref|ZP_02226549.1| cytosine-specific DNA methylase [Yersinia pestis biovar Orientalis str. IP275] gi|229516190|ref|ZP_04405639.1| site-specific DNA methylase [Vibrio cholerae RC9] gi|237640283|ref|YP_002891138.1| Dcm [Escherichia coli] gi|237810027|ref|YP_002894466.1| Dcm [Escherichia coli] gi|237810223|ref|YP_002894662.1| Dcm [Salmonella enterica] gi|118596815|dbj|BAF38119.1| cytosine-specific DNA methylase [Photobacterium damselae subsp. piscicida] gi|118596995|dbj|BAF38298.1| cytosine-specific DNA methylase [Photobacterium damselae subsp. piscicida] gi|133904850|gb|ABO40867.1| C-5 cytosine-specific DNA methylase [Yersinia ruckeri] gi|133905167|gb|ABO41182.1| C-5 cytosine-specific DNA methylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|133905393|gb|ABO42155.1| C-5 cytosine-specific DNA methylase [Yersinia pestis biovar Orientalis str. IP275] gi|165914012|gb|EDR32629.1| cytosine-specific DNA methylase [Yersinia pestis biovar Orientalis str. IP275] gi|229346840|gb|EEO11809.1| site-specific DNA methylase [Vibrio cholerae RC9] gi|229561502|gb|ACQ77705.1| Dcm [Escherichia coli] gi|229561707|gb|ACQ77909.1| Dcm [Salmonella enterica] gi|229561882|gb|ACQ78083.1| Dcm [Escherichia coli] gi|324008172|gb|EGB77391.1| C-5 cytosine-specific DNA methylase [Escherichia coli MS 57-2] gi|327536569|gb|AEA95402.1| C-5 cytosine-specific DNA methylase [Salmonella enterica subsp. enterica serovar Dublin] gi|332144438|dbj|BAK19658.1| C-5 cytosine-specific DNA methylase [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 541 Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 5/99 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG---DILEEHIDDKSTISNKL 57 + +FGV +RR+RL ++ + F+ ++ + DILE D K Sbjct: 281 LDGNEFGVIERRKRLCVVALSHGIDGFELEKVQPVRTKESRIQDILEPVPLDSERW--KS 338 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 ++ +++ +K AGKGF L + T+ Y K Sbjct: 339 FDYLAEKELRDKAAGKGFSRQLLTGDDEFCGTIGKDYAK 377 >gi|268680341|ref|YP_003304772.1| DNA-cytosine methyltransferase [Sulfurospirillum deleyianum DSM 6946] gi|268618372|gb|ACZ12737.1| DNA-cytosine methyltransferase [Sulfurospirillum deleyianum DSM 6946] Length = 335 Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 7/100 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK-LW 58 + A D+ VPQ R+RL+ + F ++ F+FP +K L D++ + D+ K Sbjct: 143 LNAHDYKVPQDRQRLFFVGFRKDLNMTFEFPKAFPLKRYLKDVIWDLKDNALPAKEKNYT 202 Query: 59 EGHQKRKENNKIAGKGFGYGLFFEN-----SATTNTLSAR 93 GH N++ F N + T+ A Sbjct: 203 NGHACTLANHEYMTGSFSTIFMSRNRVRNWDEPSFTIQAG 242 >gi|200388503|ref|ZP_03215115.1| modification methylase HaeIII [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605601|gb|EDZ04146.1| modification methylase HaeIII [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 361 Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 9/99 (9%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLG-IKPRLGDILEEHIDDKSTISN-KLW 58 A +GVPQ R+RL+II N + F+FP + L+ ++ I + LW Sbjct: 153 NARAYGVPQSRKRLFIIGVRNDLGQCFEFPAETHGKATKKNPHLKPYVSHGEAIRDLPLW 212 Query: 59 EGHQKRKENNKIAGKGFGYGLFFEN-----SATTNTLSA 92 + + + G F + N + T+ A Sbjct: 213 PEGEFYERPHDPEG-HFSWYFMSRNRKALWDSPAYTVVA 250 >gi|312874943|ref|ZP_07734962.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 2053A-b] gi|311089688|gb|EFQ48113.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 2053A-b] Length = 336 Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 11/103 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHID--------DK 50 + ++G+PQ+RER+Y++ F N F FP P + + + L + Sbjct: 152 LNPINYGIPQKRERVYMVCFRNDIKRESFVFPQPFKLNRFVENFLLPDNEVRDLIVNRPD 211 Query: 51 STISNKL-WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 +++K+ + GKG + TLSA Sbjct: 212 LVLNDKVNIHYNSPSTIRVGTVGKGGQGERIYSPKGIAITLSA 254 >gi|168821212|ref|ZP_02833212.1| modification methylase HaeIII [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205342142|gb|EDZ28906.1| modification methylase HaeIII [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320088731|emb|CBY98489.1| C-5 cytosine-specific DNA methylase family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 361 Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 9/99 (9%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLG-IKPRLGDILEEHIDDKSTISN-KLW 58 A +GVPQ R+RL+II N + F+FP + L+ ++ I + LW Sbjct: 153 NARAYGVPQSRKRLFIIGVRNDLGQSFEFPAETHGKATKKNPHLKPYVSHGEAIRDLPLW 212 Query: 59 EGHQKRKENNKIAGKGFGYGLFFEN-----SATTNTLSA 92 + + + G F + N + T+ A Sbjct: 213 PEGEFYERPHDPEG-HFSWYFMSRNRKALWDSPAYTVVA 250 >gi|157151353|ref|YP_001449946.1| cytosine-specific methyltransferase [Streptococcus gordonii str. Challis substr. CH1] gi|157076147|gb|ABV10830.1| cytosine-specific methyltransferase [Streptococcus gordonii str. Challis substr. CH1] Length = 406 Score = 61.6 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 8/100 (8%) Query: 1 MKACDFG-VPQRRERLYIIDF--LNPSVEFKFPTPLGIKPRLGDILEE--HIDDKSTISN 55 + D+G +PQ RER+YI+ F FKFP + + L D++ +D+ + Sbjct: 158 LNGKDYGNIPQNRERIYIVGFDTKEAYDLFKFPEAIKLTTSLQDVINFGDKLDEVYYYRD 217 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + + K + + + + TL+A Sbjct: 218 GKQNFYDQLKFEVTSQDTVYQWRRQYVRENKNGVVPTLTA 257 >gi|254442311|ref|ZP_05055787.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae bacterium DG1235] gi|198256619|gb|EDY80927.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae bacterium DG1235] Length = 338 Score = 61.6 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%) Query: 3 ACDFGVPQRRERLYIIDFLNP----SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + DFGVPQ RER+Y + + +F FP LG L+ D +S+ + Sbjct: 156 SVDFGVPQMRERVYFVGVRKDLVNSNFDFTFPEKAKRVKGLGSYLKSK-DPSYALSDAGY 214 Query: 59 EGHQKR 64 +K Sbjct: 215 AYLEKY 220 >gi|312874304|ref|ZP_07734336.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 2052A-d] gi|311090177|gb|EFQ48589.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 2052A-d] Length = 336 Score = 61.6 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 11/103 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHID--------DK 50 + ++G+PQ+RER+Y++ F N F FP P + + + L + Sbjct: 152 LNPINYGIPQKRERVYMVCFRNDIERESFVFPQPFKLNRFVENFLLPDNEVRDLIVNRPD 211 Query: 51 STISNKL-WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 +++K+ + GKG + TLSA Sbjct: 212 LVLNDKVNIHYNSPSTIRVGTVGKGGQGERIYSPKGIAITLSA 254 >gi|270686639|ref|ZP_06222860.1| modification methylase DsaV [Haemophilus influenzae HK1212] gi|270316163|gb|EFA28145.1| modification methylase DsaV [Haemophilus influenzae HK1212] Length = 225 Score = 61.6 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHID 48 +KA D+G+PQ R R ++I F + V F FP P+ +K + D+ + D Sbjct: 18 LKASDYGLPQLRPRAFMIGFRDDHVLGNFSFPEPIPLKFTMSDVWKGKCD 67 >gi|306824635|ref|ZP_07457980.1| DNA methylase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304433203|gb|EFM36174.1| DNA methylase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 410 Score = 61.6 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 8/100 (8%) Query: 1 MKACDFG-VPQRRERLYIIDF--LNPSVEFKFPTPLGIKPRLGDILEE--HIDDKSTISN 55 + D+G +PQ RER+YI+ F F+FP + + L D++ +D+ Sbjct: 158 LNGKDYGNIPQNRERIYIVGFDTKEAYDLFEFPEEIKLTTTLQDVINFGDKLDEVYYYRE 217 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + + K + + + + TL+A Sbjct: 218 GKQNFYDQLKFEVTSQDTVYQWRRQYVRENKNGVVPTLTA 257 >gi|242348041|ref|YP_002995602.1| C-5 cytosine-specific DNA methylase [Aeromonas hydrophila] gi|224831860|gb|ACN66991.1| C-5 cytosine-specific DNA methylase [Aeromonas hydrophila] Length = 541 Score = 61.6 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 5/99 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG---DILEEHIDDKSTISNKL 57 + +FGV +RR+RL ++ + F+ ++ + DILE D K Sbjct: 281 LDGNEFGVIERRKRLCVVALSHGIDGFELEKVQPVRTKESRIQDILESVPLDSERW--KS 338 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 ++ +++ +K AGKGF L + T+ Y K Sbjct: 339 FDYLAEKELRDKAAGKGFSRQLLTGDDEFCGTIGKDYAK 377 >gi|268607976|ref|ZP_06141707.1| cytosine-specific DNA-methyltransferase Sau96I [Ruminococcus flavefaciens FD-1] Length = 407 Score = 61.2 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 15/100 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A D+GV Q+RERL I N F FPTP KP L D+L + + T ++ Sbjct: 224 LNAWDYGVAQKRERLITIGIRNDLTNQIKFTFPTPHEYKPVLRDVLLDCPKSEGTPYSE- 282 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKD 97 K GY ++ Y K Sbjct: 283 ------YKRKIFELVPPGGYWRDIPED-----IAKEYMKS 311 >gi|209554428|ref|YP_002284952.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|209541929|gb|ACI60158.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] Length = 319 Score = 61.2 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 6/98 (6%) Query: 1 MKACDFG-VPQRRERLYIIDF--LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + D+G VPQ RER+YI+ F FK+P P+ + + D+++ + Sbjct: 146 LNTMDYGNVPQNRERIYIVGFLSKKAYEVFKYPCPITLTNTIRDVIDFNDKKLEKYYYNN 205 Query: 58 WEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + + K + + + S TL+A Sbjct: 206 SKYYSLLKPIMTKQDTIYQWRRVYCRENKSNVCPTLTA 243 >gi|148826843|ref|YP_001291596.1| modification methylase HaeII [Haemophilus influenzae PittGG] gi|148718085|gb|ABQ99212.1| modification methylase HaeII [Haemophilus influenzae PittGG] Length = 318 Score = 61.2 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 3/59 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH--IDDKSTISNKL 57 + DFG+PQ+RER+YI+ FL + F+FP P+G L +ILE + + +S++L Sbjct: 144 LNTLDFGLPQKRERIYIVGFL-DKLHFEFPKPIGKYEELSNILESDDVVPNNYFLSDEL 201 >gi|83854666|ref|ZP_00948196.1| DNA modification methylase M.NGOI [Sulfitobacter sp. NAS-14.1] gi|83842509|gb|EAP81676.1| DNA modification methylase M.NGOI [Sulfitobacter sp. NAS-14.1] Length = 254 Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTP-LGIKPRLGDILEEHIDDKSTISNKLW 58 + A D+GVPQ R R+ I+ + F +P P P +G+ L++ + + + W Sbjct: 80 LNASDYGVPQLRPRVVIVALPKDRADFFDWPEPNPHNPPTVGETLKDLMAARGWRGAEDW 139 Query: 59 E 59 Sbjct: 140 A 140 >gi|319776347|ref|YP_004138835.1| Cytosine-specific methyltransferase [Haemophilus influenzae F3047] gi|329123500|ref|ZP_08252064.1| modification methylase HaeII [Haemophilus aegyptius ATCC 11116] gi|317450938|emb|CBY87164.1| Cytosine-specific methyltransferase [Haemophilus influenzae F3047] gi|327471082|gb|EGF16537.1| modification methylase HaeII [Haemophilus aegyptius ATCC 11116] Length = 318 Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 3/59 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH--IDDKSTISNKL 57 + DFG+PQ+RER+YI+ FL + F+FP P+G L +ILE + + +S++L Sbjct: 144 LNTLDFGLPQKRERIYIVGFL-DKLHFEFPKPIGKYEELSNILESDDVVPNNYFLSDEL 201 >gi|12229852|sp|O30868|MTH2_HAEAE RecName: Full=Modification methylase HaeII; Short=M.HaeII; AltName: Full=Cytosine-specific methyltransferase HaeII gi|2425087|gb|AAB70829.1| HaeII methylase [Haemophilus aegyptius ATCC 11116] Length = 318 Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 3/59 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH--IDDKSTISNKL 57 + DFG+PQ+RER+YI+ FL + F+FP P+G L +ILE + + +S++L Sbjct: 144 LNTLDFGLPQKRERIYIVGFL-DKLHFEFPKPIGKYEELSNILESDDVVPNNYFLSDEL 201 >gi|297379680|gb|ADI34567.1| DNA-cytosine methyltransferase [Helicobacter pylori v225d] Length = 265 Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER+ ++ L +F FP P+ L D L + +S + Sbjct: 59 LNALDYGVPQIRERVILVGALKSFKQKFHFPKPIKTHFSLKDALGDLPPIQSGENGDALG 118 Query: 60 GHQK 63 + Sbjct: 119 YLKN 122 >gi|160934346|ref|ZP_02081733.1| hypothetical protein CLOLEP_03217 [Clostridium leptum DSM 753] gi|156867019|gb|EDO60391.1| hypothetical protein CLOLEP_03217 [Clostridium leptum DSM 753] Length = 433 Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 4/60 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLGDI-LEEHIDDKSTISNK 56 + A D+GV Q+RERL I N ++F FP P KP L DI L+ + S S+ Sbjct: 251 LNAWDYGVAQKRERLITIGIRNDLVQKIKFDFPAPHKYKPVLRDILLDCPQSEGSQYSDH 310 >gi|68250112|ref|YP_249224.1| modification methylase HaeII [Haemophilus influenzae 86-028NP] gi|68058311|gb|AAX88564.1| modification methylase HaeII [Haemophilus influenzae 86-028NP] Length = 318 Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 3/59 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH--IDDKSTISNKL 57 + DFG+PQ+RER+YI+ FL + F+FP P+G L +ILE + + +S++L Sbjct: 144 LNTLDFGLPQKRERIYIVGFL-DKLHFEFPKPIGKYEELSNILESDDVVPNNYFLSDEL 201 >gi|317057160|ref|YP_004105627.1| XRE family transcriptional regulator [Ruminococcus albus 7] gi|315449429|gb|ADU22993.1| transcriptional regulator, XRE family [Ruminococcus albus 7] Length = 407 Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 15/100 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLN---PSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A D+GV Q+RERL I N + F FPTP KP L D+L + + T ++ Sbjct: 224 LNAWDYGVAQKRERLITIGIRNNLTDKISFSFPTPHEYKPVLRDVLLDCPKSEGTPYSE- 282 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKD 97 K GY ++ Y K Sbjct: 283 ------YKRKIFELVPPGGYWRDIPED-----IAKEYMKS 311 >gi|227486883|ref|ZP_03917199.1| DNA restriction-modification system, DNA methylase [Corynebacterium glucuronolyticum ATCC 51867] gi|227541955|ref|ZP_03972004.1| DNA restriction-modification system DNA methylase [Corynebacterium glucuronolyticum ATCC 51866] gi|227092957|gb|EEI28269.1| DNA restriction-modification system, DNA methylase [Corynebacterium glucuronolyticum ATCC 51867] gi|227182398|gb|EEI63370.1| DNA restriction-modification system DNA methylase [Corynebacterium glucuronolyticum ATCC 51866] Length = 332 Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 +++ D+GVPQ R R ++ F+FP P+ + +G+ L +++K LW Sbjct: 150 IQSADYGVPQLRPRFILVALRKEYSPYFEFPEPMPHRITVGEALHGLMEEKGWPGADLWA 209 >gi|331084584|ref|ZP_08333682.1| hypothetical protein HMPREF0992_02606 [Lachnospiraceae bacterium 6_1_63FAA] gi|330400654|gb|EGG80261.1| hypothetical protein HMPREF0992_02606 [Lachnospiraceae bacterium 6_1_63FAA] Length = 324 Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 14/106 (13%) Query: 1 MKACDFG-VPQRRERLYIIDFLN--PSVEFKFPTPLGIKPRLGDILE--EHIDDKSTISN 55 + A +G V Q RER+YI+ F + +F +P + + + DI++ +D+K + Sbjct: 146 LNAMTYGNVAQNRERIYIVAFRDEEDYEKFHWPLSIPLTNSVKDIIDFENKVDEKYYYTP 205 Query: 56 KLWEGHQKRKENNKIAGKG------FGYGLFF---ENSATTNTLSA 92 ++G + + + + S TL+A Sbjct: 206 GKYKGEIYDALVEAMKNDDPKNPAIYQWRRKYVRKNQSGVVPTLTA 251 >gi|238751088|ref|ZP_04612584.1| Modification methylase FnuDI [Yersinia rohdei ATCC 43380] gi|238710778|gb|EEQ03000.1| Modification methylase FnuDI [Yersinia rohdei ATCC 43380] Length = 362 Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 9/99 (9%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLG--IKPRLGDILEEHIDDKSTISNKLW 58 A ++GVPQ R+RL+II + F+FP + + + + LW Sbjct: 153 NAKEYGVPQSRKRLFIIGVRKDLDQYFEFPLATHGKLSQKNPHLKPYASHGDAICDLPLW 212 Query: 59 EGHQKRKENNKIAGKGFGYGLFFEN-----SATTNTLSA 92 + + + G F + N + T+ A Sbjct: 213 PEGEFYERPHDPEG-HFSWYFMSRNRKAKWDSPAYTVVA 250 >gi|172038109|ref|YP_001804610.1| putative modification methylase [Cyanothece sp. ATCC 51142] gi|171699563|gb|ACB52544.1| putative modification methylase [Cyanothece sp. ATCC 51142] Length = 344 Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 2/87 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW-E 59 + A +FG+PQ+RER++I+ F + F + P + L +I+E+ + + S ++ Sbjct: 167 LNALNFGLPQKRERVFIVGFR-DPLAFIWKQPNILMKPLSEIIEKSVSEFYYASEQIQRN 225 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSAT 86 K + N++ + SA Sbjct: 226 RLAKYQGNHQHKITIWHENKAGHISAY 252 >gi|303231468|ref|ZP_07318199.1| modification methylase HhaI family protein [Veillonella atypica ACS-049-V-Sch6] gi|302513905|gb|EFL55916.1| modification methylase HhaI family protein [Veillonella atypica ACS-049-V-Sch6] Length = 411 Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 8/100 (8%) Query: 1 MKACDFG-VPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDILEEH--IDDKSTISN 55 + D+G +PQ RER+YI+ FL F FP + + L DI++ + +D+ + Sbjct: 154 LNGKDYGNIPQNRERIYIVGFLEKSAYDAFIFPDEIPLTTSLSDIIDFNGKMDEYYYYTE 213 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + + + K K + + + + + TL+A Sbjct: 214 DKNKFYDELKSAIKSSETIYQWRRQYVRENKTGVVPTLTA 253 >gi|317054725|ref|YP_004103193.1| cytosine specific DNA methyltransferase [Paracoccus aminophilus] gi|294869157|gb|ADF47149.1| cytosine specific DNA methyltransferase [Paracoccus aminophilus] Length = 363 Score = 60.8 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 40/95 (42%), Gaps = 6/95 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE- 59 + A D+GVPQ R R ++I + ++ FP P + D+ ++ + + L + Sbjct: 149 LNAADYGVPQARPRFFLIGTRDGE-KYNFPDPSHAPTSVNDLFLSNMPRHLNVWDALSDL 207 Query: 60 -GHQKRKENNKIAGK---GFGYGLFFENSATTNTL 90 ++ + + ++ Y L + + TL Sbjct: 208 PYIEQGEGSEEMKNSTQAHNAYQLERRGNRSAGTL 242 >gi|145629543|ref|ZP_01785341.1| modification methylase HaeII [Haemophilus influenzae 22.1-21] gi|144978386|gb|EDJ88150.1| modification methylase HaeII [Haemophilus influenzae 22.1-21] Length = 219 Score = 60.8 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 3/59 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH--IDDKSTISNKL 57 + DFG+PQ+RER+YI+ FL + F+FP P+G L +ILE + + +S++L Sbjct: 45 LNTLDFGLPQKRERIYIVGFL-DKLHFEFPKPIGKYEELSNILESDDVVPNNYFLSDEL 102 >gi|317008995|gb|ADU79575.1| DNA-cytosine methyltransferase [Helicobacter pylori India7] Length = 309 Score = 60.8 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 8/98 (8%) Query: 1 MKACDFG-VPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + ++ +PQ RER+YII FL+ + F FP + + D+LE + ++ K Sbjct: 142 LNTYEYSTIPQNRERIYIIGFLDENHYKRFHFPLKINHTQSIKDLLEIKVGEEFYY--KQ 199 Query: 58 WEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + ++ K+ + + + + TL+A Sbjct: 200 YRFYEALKKEITKRDTCYQWRRHYVRENKNNLCPTLTA 237 >gi|262200549|ref|YP_003271757.1| DNA-cytosine methyltransferase [Gordonia bronchialis DSM 43247] gi|262083896|gb|ACY19864.1| DNA-cytosine methyltransferase [Gordonia bronchialis DSM 43247] Length = 399 Score = 60.8 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 12/89 (13%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 A D+GVPQ+R R++ + F + E+ FP+P L D+ S WE Sbjct: 179 NAADYGVPQQRWRVFFVGFRSDVDAEWSFPSPTHSAA----ALRAAQDNGSY-----WEW 229 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNT 89 H+ K+ + L T Sbjct: 230 HKVAKKYRTPTVR--TAALVDGPLKPWRT 256 >gi|227540760|ref|ZP_03970809.1| DNA-cytosine methyltransferase [Corynebacterium glucuronolyticum ATCC 51866] gi|227183472|gb|EEI64444.1| DNA-cytosine methyltransferase [Corynebacterium glucuronolyticum ATCC 51866] Length = 387 Score = 60.8 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGI 35 A D+GVPQ R R++I+ F + + + FP P Sbjct: 181 DAADYGVPQHRHRVFIVGFRSDINAGWNFPQPTHS 215 >gi|331091171|ref|ZP_08340013.1| hypothetical protein HMPREF9477_00656 [Lachnospiraceae bacterium 2_1_46FAA] gi|330405393|gb|EGG84929.1| hypothetical protein HMPREF9477_00656 [Lachnospiraceae bacterium 2_1_46FAA] Length = 375 Score = 60.8 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 13/104 (12%) Query: 2 KACDFGVPQRRERLYIIDFLNPS--------VEFKFPTPLG--IKPRLGDILEEHIDDKS 51 + +FG+PQ R R YI+ F +E P + L ++LE H + K Sbjct: 165 NSRNFGIPQNRPRTYIMAFNRQRYGAAALAGIENCLPIENDWYLYEDLNELLEFHAEAKY 224 Query: 52 TISNKLWEGHQKRKENNKIAGKGFGYGLFFE---NSATTNTLSA 92 +++ + + +E G GFGY + E NT+ A Sbjct: 225 YMASGYLDTLIRHREREHGKGNGFGYRIVNEPGIEHPVANTIMA 268 >gi|119511510|ref|ZP_01630619.1| type II DNA modification enzyme (methyltransferase) [Nodularia spumigena CCY9414] gi|119463821|gb|EAW44749.1| type II DNA modification enzyme (methyltransferase) [Nodularia spumigena CCY9414] Length = 371 Score = 60.8 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 14/99 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG--IKPRLGDIL----EEHIDDKSTIS 54 + A +GVPQ+RERL+ + +++P G+ L + ++ Sbjct: 162 LNAAHYGVPQKRERLFCVAHKG---SWQWPEKTHFYSPYTAGEALGKSAYLAPPNSKILT 218 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + E +K + +K T++ R Sbjct: 219 PSMDEYIKKYEIASKCINP-----RDINLDTPARTVTCR 252 >gi|254410261|ref|ZP_05024041.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196183297|gb|EDX78281.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 384 Score = 60.8 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 2/78 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + + DFGVPQ RER+ I+ N F +L + L + + + Sbjct: 144 LNSKDFGVPQNRERIIIVATKNKQFNFNKLKKNKCVAKLKNFLFNSENFEYLEPDSY--T 201 Query: 61 HQKRKENNKIAGKGFGYG 78 + + + GY Sbjct: 202 LIDKPKQQQSGLIFVGYR 219 >gi|269119458|ref|YP_003307635.1| DNA-cytosine methyltransferase [Sebaldella termitidis ATCC 33386] gi|268613336|gb|ACZ07704.1| DNA-cytosine methyltransferase [Sebaldella termitidis ATCC 33386] Length = 383 Score = 60.8 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+ +PQRR+R++ + + ++ FP P+ +K RL D+LE+ + +K + + + Sbjct: 148 LNAKDYRIPQRRKRVFCVSIF-GNEKYVFPKPVELKLRLRDMLEKEVPEKYYLKD--IDN 204 Query: 61 HQKRKENNKIAGKGFGYGLFF 81 ++ NK G + Sbjct: 205 NKFHVNMNKKQGYFISGEVAN 225 >gi|148555377|ref|YP_001262959.1| DNA-cytosine methyltransferase [Sphingomonas wittichii RW1] gi|148500567|gb|ABQ68821.1| DNA-cytosine methyltransferase [Sphingomonas wittichii RW1] Length = 412 Score = 60.8 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 + A FGVPQ RER++I+ FKFP P Sbjct: 169 LNAASFGVPQLRERVFIVASREGK-NFKFPQPTHGPK 204 >gi|210610944|ref|ZP_03288669.1| hypothetical protein CLONEX_00859 [Clostridium nexile DSM 1787] gi|210152244|gb|EEA83251.1| hypothetical protein CLONEX_00859 [Clostridium nexile DSM 1787] Length = 278 Score = 60.4 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILEEHID 48 + A D+GVPQ+RERL I N V F FP KP L D+L + D Sbjct: 95 LNAWDYGVPQKRERLITIGIRNDLVNRIKFHFPEAHDYKPVLRDVLLDCPD 145 >gi|330998524|ref|ZP_08322345.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT 11841] gi|329568255|gb|EGG50071.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT 11841] Length = 379 Score = 60.4 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 4/57 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A D+GVPQRRER+ I+ N +V + FP +L + S Sbjct: 171 LNAADYGVPQRRERVVIVGIRNDLNVAWNFPEGTH---SQEALLWDKYVTGSYWERH 224 >gi|308061704|gb|ADO03592.1| DNA-cytosine methyltransferase [Helicobacter pylori Cuz20] gi|308063214|gb|ADO05101.1| DNA-cytosine methyltransferase [Helicobacter pylori Sat464] gi|317180749|dbj|BAJ58535.1| DNA-cytosine methyltransferase [Helicobacter pylori F32] Length = 309 Score = 60.4 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 8/98 (8%) Query: 1 MKACDFG-VPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + ++ +PQ RER+YII FL+ + F FP + + D+LE + ++ K Sbjct: 142 LNTYEYSTIPQNRERIYIIGFLDKNHYKRFHFPLKINHTQSIKDLLEIKVGEEFYY--KQ 199 Query: 58 WEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + ++ K+ + + + + TL+A Sbjct: 200 YRFYETLKKEITKRDTCYQWRRHYVRENKNNLCPTLTA 237 >gi|228473386|ref|ZP_04058140.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga gingivalis ATCC 33624] gi|228275288|gb|EEK14086.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga gingivalis ATCC 33624] Length = 358 Score = 60.4 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID 48 + A D+GVPQ R R +++ + +EF+FP P K + + + + D Sbjct: 149 LWASDYGVPQNRNRFFMVGNRHG-IEFEFPEPFEKKITVEEAIGDLPD 195 >gi|308229532|gb|ADO24181.1| M.ApaI [Acetobacter pasteurianus subsp. pasteurianus] Length = 349 Score = 60.4 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 35/102 (34%), Gaps = 10/102 (9%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQ 62 A D+GVPQ+R RL I+ + F FP P + + + Sbjct: 145 AADYGVPQKRRRLIIVGMKKGT--FWFPKPTHGPDTNIPHVASGRVIDKACRLEPPDCPV 202 Query: 63 KRKENNKIAGKGFGYGLFF------ENSATTNTL--SARYYK 96 + + ++ + SA +TL SA YK Sbjct: 203 IYAKCPDPRRSPYAGHVYNGGGRPIDLSAPCHTLLASAGGYK 244 >gi|225862883|ref|YP_002748261.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102] gi|225787129|gb|ACO27346.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102] Length = 367 Score = 60.4 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 3/84 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEE-HIDDKSTISNKLWE 59 + A D+GVPQ R+R++ + L+ F++P K + L + + DK N+++ Sbjct: 152 LNAADYGVPQNRQRVFFVGVLDGH--FEYPELDENKVSTLEALSDLPVLDKIEQYNEVYN 209 Query: 60 GHQKRKENNKIAGKGFGYGLFFEN 83 + + + + + N Sbjct: 210 YSCDPQNSYQSIMRKNSNEILNHN 233 >gi|325270473|ref|ZP_08137075.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM 16608] gi|324987196|gb|EGC19177.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM 16608] Length = 365 Score = 60.4 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 3/97 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 +KA ++G+PQRRER+ I+ + +++P P+ + + + D+ I++ + Sbjct: 158 LKAVEYGIPQRRERVIIVGIRDDLTFNYEYPAPVCTEAEATPL--SAVIDELAITDSKYY 215 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 ++ + K A GL+ S T++A K Sbjct: 216 FSERAVQGVKKAKNNMKRGLWQSLSQPCLTITAHLAK 252 >gi|317181696|dbj|BAJ59480.1| DNA-cytosine methyltransferase [Helicobacter pylori F57] Length = 309 Score = 60.4 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 8/98 (8%) Query: 1 MKACDFG-VPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + ++ +PQ RER+YII FL+ + F FP + + D+LE + ++ K Sbjct: 142 LNTYEYSTIPQNRERIYIIGFLDKNHYKRFHFPLKINHTQSIKDLLEIKVGEEFYY--KQ 199 Query: 58 WEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + ++ K+ + + + + TL+A Sbjct: 200 YRFYETLKKEITKRDTCYQWRRHYVRENKNNLCPTLTA 237 >gi|188527161|ref|YP_001909848.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi470] gi|188143401|gb|ACD47818.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi470] Length = 309 Score = 60.4 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 8/98 (8%) Query: 1 MKACDFG-VPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + ++ +PQ RER+YII FL+ + F FP + + D+LE + ++ K Sbjct: 142 LNTYEYSTIPQNRERIYIIGFLDKNHYKRFHFPLKINHTQSIKDLLEIKVGEEFYY--KQ 199 Query: 58 WEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 + ++ K+ + + + + TL+A Sbjct: 200 YRFYETLKKEITKRDTCYQWRRHYVRENKNNLCPTLTA 237 >gi|317013900|gb|ADU81336.1| type II DNA modification (methyltransferase) [Helicobacter pylori Gambia94/24] Length = 351 Score = 60.4 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER+ ++ L +F FP P+ L D L + +S + Sbjct: 145 LNALDYGVPQIRERVILVGALKSFKQKFYFPKPIKTHFSLKDALGDLPPIQSGENGDALG 204 Query: 60 GHQK 63 + Sbjct: 205 YLKN 208 >gi|254467362|ref|ZP_05080773.1| DNA-cytosine methyltransferase [Rhodobacterales bacterium Y4I] gi|206688270|gb|EDZ48752.1| DNA-cytosine methyltransferase [Rhodobacterales bacterium Y4I] Length = 319 Score = 60.4 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTP-LGIKPRLGDILEEHIDDK 50 + A DFGVPQ R R+ I+ S +F +P P P +G L + + ++ Sbjct: 145 LNASDFGVPQLRPRVAIVALRKEFSGQFNWPEPLPHNPPTVGATLIDLMKER 196 >gi|10955252|ref|NP_052188.1| DNA-methyltransferase [Escherichia coli] gi|1237268|gb|AAC37145.1| eco29kIM [Escherichia coli] gi|2660513|emb|CAA04944.1| DNA-methyltransferase [Escherichia coli] Length = 382 Score = 60.4 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 31/78 (39%), Gaps = 4/78 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER+ I+ + + ++ FP+ +L E + Sbjct: 170 INAADYGVPQIRERVIIVGVRSDLNKKWSFPSVTH---TQEKLLWEQHVTGDYWRKHNID 226 Query: 60 GHQKRKENNKIAGKGFGY 77 + + ++ + + Sbjct: 227 AVIDKGISERLMKRFGIF 244 >gi|19718332|ref|NP_604405.1| plasmid encoded methyltransferase Pem [Salmonella enteritidis] gi|19526586|gb|AAL87019.1| plasmid encoded methyltransferase Pem [Salmonella enterica subsp. enterica serovar Enteritidis] Length = 382 Score = 60.4 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 31/78 (39%), Gaps = 4/78 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER+ I+ + + ++ FP+ +L E + Sbjct: 170 INAADYGVPQIRERVIIVGVRSDLNKKWSFPSVTH---TQEKLLWEQHVTGDYWRKHNID 226 Query: 60 GHQKRKENNKIAGKGFGY 77 + + ++ + + Sbjct: 227 AVIDKGISERLMKRFGIF 244 >gi|168185144|ref|ZP_02619808.1| modification methylase SinI [Clostridium botulinum Bf] gi|182671812|gb|EDT83773.1| modification methylase SinI [Clostridium botulinum Bf] Length = 363 Score = 60.0 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIK 36 + A D+G+ Q+RER++I+ + +F+FP K Sbjct: 172 INAADYGIAQKRERVFIVGIRKDLNKKFEFPEKTHNK 208 >gi|159027646|emb|CAO89510.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 728 Score = 60.0 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 24/57 (42%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A DFGVPQ RER+ II N F P+L D L + + + Sbjct: 146 LNAKDFGVPQNRERIIIIATQNKKFNFNSLKYTSPIPKLRDFLSPQGNFEYLDKKEY 202 >gi|328766176|gb|EGF76234.1| hypothetical protein BATDEDRAFT_28720 [Batrachochytrium dendrobatidis JAM81] Length = 373 Score = 60.0 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLG 34 A D+GVPQ+RER++II N E+ FP P Sbjct: 182 NARDYGVPQQRERVFIIGIRNDIEFEYDFPAPTH 215 >gi|163738696|ref|ZP_02146110.1| DNA-cytosine methyltransferase [Phaeobacter gallaeciensis BS107] gi|163741592|ref|ZP_02148983.1| DNA modification methylase M.NGOI [Phaeobacter gallaeciensis 2.10] gi|161385326|gb|EDQ09704.1| DNA modification methylase M.NGOI [Phaeobacter gallaeciensis 2.10] gi|161388024|gb|EDQ12379.1| DNA-cytosine methyltransferase [Phaeobacter gallaeciensis BS107] Length = 324 Score = 60.0 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTP-LGIKPRLGDILEEHIDDKSTISNKLW 58 + A D+GVPQ R R+ I+ S +F +P P +G+ L + + ++ + W Sbjct: 145 LNASDYGVPQLRPRVAIVALRKEFSGQFNWPDPLPHNPRTVGETLLDLMKERGWRGAEDW 204 Query: 59 E 59 Sbjct: 205 A 205 >gi|258593909|emb|CAA33765.2| DNA(cytosine-5)methyltransferase [Lysinibacillus sphaericus] Length = 396 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLG 34 + A D+GVPQ RER+ I+ N +++P Sbjct: 198 LNARDYGVPQIRERVIIVGVRNDIDFNYEYPEITH 232 >gi|312902257|ref|ZP_07761465.1| helix-turn-helix protein [Enterococcus faecalis TX0635] gi|283466064|emb|CBG92839.1| hypothetical protein [Enterococcus casseliflavus] gi|310634316|gb|EFQ17599.1| helix-turn-helix protein [Enterococcus faecalis TX0635] Length = 470 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 5/55 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-----FKFPTPLGIKPRLGDILEEHIDDK 50 + A ++GV Q+RER+ II N E FKFP +P L D+L++ + Sbjct: 286 LNAWNYGVAQKRERIVIIGIRNDLFEQQQYSFKFPKEYTYQPVLRDVLKDVPKSE 340 >gi|261839203|gb|ACX98968.1| DNA-cytosine methyltransferase [Helicobacter pylori 52] Length = 309 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 4/96 (4%) Query: 1 MKACDFG-VPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDKSTISN-K 56 + ++ +PQ RER+YI+ FL+ + F FP + + D+LE + ++ + Sbjct: 142 LNTYEYSTIPQNRERIYIVGFLDKNHYKRFHFPLKVNHTQSIKDLLEIKVGEEFYYKQYR 201 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 +E +K + + + + TL+A Sbjct: 202 FYETLKKEITKTDTCYQWRRHYVRENKNNLCPTLTA 237 >gi|153870185|ref|ZP_01999636.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS] gi|152073352|gb|EDN70367.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS] Length = 235 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + + DFG+PQ+RER I+ F ++ F FP PLGIKP L IL +K + K Sbjct: 144 LNSLDFGIPQKRERTIIVGF-QENIAFSFPKPLGIKPDLTKIL-----EKDSEVEKNILL 197 Query: 61 HQKRKENNKIAGK 73 K+ Sbjct: 198 LMSLKKRECKKLN 210 >gi|257867246|ref|ZP_05646899.1| DNA methyltransferase [Enterococcus casseliflavus EC30] gi|257873580|ref|ZP_05653233.1| DNA methyltransferase [Enterococcus casseliflavus EC10] gi|257801302|gb|EEV30232.1| DNA methyltransferase [Enterococcus casseliflavus EC30] gi|257807744|gb|EEV36566.1| DNA methyltransferase [Enterococcus casseliflavus EC10] Length = 470 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 5/55 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-----FKFPTPLGIKPRLGDILEEHIDDK 50 + A ++GV Q+RER+ II N E FKFP +P L D+L++ + Sbjct: 286 LNAWNYGVAQKRERIVIIGIRNDLFEQQQYSFKFPKEYTYQPVLRDVLKDVPKSE 340 >gi|289167263|ref|YP_003445530.1| type II DNA modification enzyme (methyltransferase cytosine-specific) [Streptococcus mitis B6] gi|288906828|emb|CBJ21662.1| type II DNA modification enzyme (methyltransferase cytosine-specific) [Streptococcus mitis B6] Length = 387 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 3/87 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTI--SNKL 57 + A D+GVPQ RER+++I N ++EF++ P L + I D ++ +++ Sbjct: 169 LNAKDYGVPQNRERVFLIGVRNDLNIEFEWSFPEKCTSENPFNLRDAIGDLPSLGNNDRA 228 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENS 84 + + + + +I +G LF S Sbjct: 229 DQYVEDPQTDYQILMRGNQDQLFNHVS 255 >gi|332970702|gb|EGK09683.1| DNA (cytosine-5-)-methyltransferase [Kingella kingae ATCC 23330] Length = 197 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDD 49 + A +FGVPQ+RER++I+ F + +F+FP L K L L+E + Sbjct: 144 LNASEFGVPQKRERVFIVGFRDDEDFFKFQFPETLPEKIPLKYALDEQANH 194 >gi|307294815|ref|ZP_07574657.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1] gi|306879289|gb|EFN10507.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1] Length = 394 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 29/83 (34%), Gaps = 7/83 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A ++GVPQRRER+ F +E+ FP P L +L + Sbjct: 187 LNAANYGVPQRRERVVFAGFRADLGIEWSFPEPTH---SLDALLWDQARSADYWDRHKVA 243 Query: 60 GHQKRKENNKIAGKGFGYGLFFE 82 +R G L + Sbjct: 244 ---RRDRVIDARLHARGRALVEK 263 >gi|298286911|sp|P13906|MTB1_BACSH RecName: Full=Modification methylase BspRI; Short=M.BspRI; AltName: Full=Cytosine-specific methyltransferase BspRI gi|258593908|emb|CAA33764.2| DNA(cytosine-5)methyltransferase [Lysinibacillus sphaericus] Length = 424 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLG 34 + A D+GVPQ RER+ I+ N +++P Sbjct: 226 LNARDYGVPQIRERVIIVGVRNDIDFNYEYPEITH 260 >gi|332530473|ref|ZP_08406414.1| DNA cytosine methyltransferase M.NgoMIII [Hylemonella gracilis ATCC 19624] gi|332040042|gb|EGI76427.1| DNA cytosine methyltransferase M.NgoMIII [Hylemonella gracilis ATCC 19624] Length = 413 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGI 35 A ++GVPQRRER++I+ F +++ FP Sbjct: 188 NAANYGVPQRRERVFIVGFRRDLPIQWSFPRETHS 222 >gi|632681|gb|AAB31678.1| DNA (cytosine-5)-methyltransferase, m5C-MTase {BspRI restriction-modification system} [Escherichia coli, Peptide, 424 aa] Length = 424 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLG 34 + A D+GVPQ RER+ I+ N +++P Sbjct: 226 LNARDYGVPQIRERVIIVGVRNDIDFNYEYPEITH 260 >gi|15611502|ref|NP_223153.1| type II DNA modification (methyltransferase [Helicobacter pylori J99] gi|4154963|gb|AAD06007.1| TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE) [Helicobacter pylori J99] Length = 351 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER+ ++ L +F FP P+ L D L + +S + Sbjct: 145 LNALDYGVPQVRERVILVGALKSFKQKFYFPKPIKTHFSLKDALGDLPPIQSGENGDALG 204 Query: 60 GHQK 63 + Sbjct: 205 YLKN 208 >gi|331086924|ref|ZP_08336001.1| hypothetical protein HMPREF0987_02304 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330410090|gb|EGG89525.1| hypothetical protein HMPREF0987_02304 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 438 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 2/95 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK--LW 58 + A D+GVPQRR R+ I + ++P P +L+ D + + + Sbjct: 181 LNAADYGVPQRRNRIIFIGYRRGLTPPQYPEPTVKPNEQLSLLDAIGDLITDSRKRHAVN 240 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 H K ++++ G + NT +R Sbjct: 241 PTHTKYQQDSINGRTPGVDGKPIPSKKLLNTELSR 275 >gi|330718183|ref|ZP_08312783.1| cytosine-specific methyltransferase [Leuconostoc fallax KCTC 3537] Length = 414 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 18/110 (16%) Query: 1 MKACDFG-VPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHI---------- 47 + A ++G +PQ RER+Y++ F + F FP + + +L DI++ Sbjct: 152 LNAKEYGNIPQNRERIYVVGFKDKKAFDNFSFPEKIDLTTKLSDIIDFDAKIGEITKFGD 211 Query: 48 --DDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFF---ENSATTNTLSA 92 +D+ + + E K + + + + S TL+A Sbjct: 212 FLEDRFFYKEDKQTFYPQLVEAMKSSETVYQWRRQYVRENKSGVIPTLTA 261 >gi|291544225|emb|CBL17334.1| DNA-methyltransferase (dcm) [Ruminococcus sp. 18P13] Length = 407 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 37/100 (37%), Gaps = 15/100 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A ++GV Q+RERL I N F FPTP KP L D+L + + T ++ Sbjct: 224 LNAWNYGVAQKRERLITIGIRNDLTNQIKFTFPTPHEYKPVLRDVLLDCPKSEGTPYSE- 282 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKD 97 K GY ++ Y K Sbjct: 283 ------YKRKIFELVPPGGYWRDIPED-----IAKEYMKS 311 >gi|218441855|ref|YP_002380184.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] gi|218174583|gb|ACK73316.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] Length = 342 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 12/97 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL----EEHIDDKSTISNK 56 + A + PQ RER++II +F FP L G+ L ++ Sbjct: 167 LNASWYETPQNRERVFIIGHRG---KFTFPCRLSNSITAGEALGDLAISIPPGAKFLTES 223 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + K ++ +K Y + T++ R Sbjct: 224 MNQYVAKYEKASKCKQPRDLY-----LDKPSRTVTCR 255 >gi|119716511|ref|YP_923476.1| DNA-cytosine methyltransferase [Nocardioides sp. JS614] gi|119537172|gb|ABL81789.1| DNA-cytosine methyltransferase [Nocardioides sp. JS614] Length = 399 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGI 35 A D+GVPQ R R+ ++ F + + FP P Sbjct: 203 NAADYGVPQNRWRVVLVGFRKDLGISWSFPDPTHS 237 >gi|331270912|ref|YP_004385623.1| putative cytosine-specific DNA methylotransferase [Clostridium botulinum BKT015925] gi|329127304|gb|AEB77248.1| putative cytosine-specific DNA methylotransferase [Clostridium botulinum BKT015925] Length = 349 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 2/84 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLN--PSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A +FG+PQ RER+++I + + KF RL DIL+ +D++ I N Sbjct: 149 LNAKNFGIPQNRERIFVIGIREYIDNKQMKFNEGKDYGYRLKDILQNQVDERFYIDNDKC 208 Query: 59 EGHQKRKENNKIAGKGFGYGLFFE 82 ++ ++ K + E Sbjct: 209 SILLEKLDDEVTKIKQATKKGYDE 232 >gi|322511205|gb|ADX06517.1| putative C-5 cytosine specific DNA methyltransferase [Organic Lake phycodnavirus] Length = 384 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 9/99 (9%) Query: 1 MKACDF-GVPQRRERLYIIDFLN----PSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + D G+P RER+YI+ + FP ++ + LE I +K ++ Sbjct: 214 LNTADITGIPHHRERIYIVCIKSKNVFDKFNLDFPKINKK--KISEFLEHDIPEKYYYTD 271 Query: 56 K--LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 K WE ++ + + S TL+A Sbjct: 272 KSSTWEVVKESVVKKDTIYQYRRVYVRENKSGECPTLTA 310 >gi|294678239|ref|YP_003578854.1| cytosine-specific DNA-methyltransferase [Rhodobacter capsulatus SB 1003] gi|294477059|gb|ADE86447.1| site-specific DNA-methyltransferase (cytosine-specific) [Rhodobacter capsulatus SB 1003] Length = 451 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGI--KPRLGDILEEHIDDKSTISNKLWEGHQ 62 FGVPQ RER I+ F +P P + + +L+E + + + + + Sbjct: 149 FGVPQVRERAIIVGSRTGLRHFSWPEPTHQLDQVTIKSVLDEKPKEARPLGPRFIQYLE 207 >gi|209901299|ref|YP_002290938.1| putative DNA methylase [Clostridium phage phiCD27] gi|199612180|gb|ACH91353.1| putative DNA methylase [Clostridium phage phiCD27] Length = 276 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 35/94 (37%), Gaps = 3/94 (3%) Query: 1 MKACDFGVPQRRERLYIID-FLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + +FGVPQ RER++I+ F S FP + L + Sbjct: 150 LNSKNFGVPQNRERIFIVGHFRGRSTRKVFPIERKSRKNLEQLNNPTHSTNRIYDAVGIA 209 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + A G + +NS T++AR Sbjct: 210 RCIRSQAGGGGAKTGLYFIDLNKNSKV--TINAR 241 >gi|86137701|ref|ZP_01056277.1| DNA modification methylase M.NGOI [Roseobacter sp. MED193] gi|85825293|gb|EAQ45492.1| DNA modification methylase M.NGOI [Roseobacter sp. MED193] Length = 319 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTP-LGIKPRLGDIL 43 + A DFGVPQ R R+ I+ + F +P P P +G+ L Sbjct: 145 LNASDFGVPQLRPRVAIVALRKEYSDQFNWPDPLPHNPPTVGETL 189 >gi|967022|emb|CAA62381.1| DNA (cytosine-5-)-methyltransferase [Geobacillus stearothermophilus] gi|1262297|gb|AAA96793.1| m5C-multispecific methyltransferase [Geobacillus stearothermophilus] gi|1589631|prf||2211376A cytosine-C5-DNA methyltransferase Length = 534 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 4/63 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRL---GDILEEHIDDKSTISNK 56 + A D+GV Q+RER++I+ F+FP P R D++ + + T + Sbjct: 155 INAWDYGVAQKRERVFIVGIRADLGFAFEFPEPRPGDYRTQVLRDVIGDLPEPVDTCGRR 214 Query: 57 LWE 59 + + Sbjct: 215 VKK 217 >gi|320326214|gb|EFW82269.1| cytosine-specific DNA-methyltransferase [Pseudomonas syringae pv. glycinea str. B076] Length = 448 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 33/62 (53%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + +FG+PQ RER+YI+ L P +F +P + +L++H D +S ++ + Sbjct: 149 LSPHNFGIPQIRERVYIVGSLIPLEDFSWPKKTDAPTSIDTVLDDHPADAKKLSTQVTDC 208 Query: 61 HQ 62 + Sbjct: 209 LE 210 >gi|261364680|ref|ZP_05977563.1| modification methylase Eco47II [Neisseria mucosa ATCC 25996] gi|288566964|gb|EFC88524.1| modification methylase Eco47II [Neisseria mucosa ATCC 25996] Length = 419 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 3/86 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLN---PSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 +KA + VPQ+RERL++I VEF +P+P L D L+ K + Sbjct: 220 LKAVFYKVPQKRERLFLIGIRKDLADKVEFHWPSPYHRILTLQDALKAGELYKDDVPQSP 279 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFEN 83 + + +RK GY + Sbjct: 280 GQKYPQRKAEIMAQVPAGGYWKDLPD 305 >gi|288928693|ref|ZP_06422539.1| modification methylase NgoBI (Cytosine-specific methyltransferase NgoBI) [Prevotella sp. oral taxon 317 str. F0108] gi|288329677|gb|EFC68262.1| modification methylase NgoBI (Cytosine-specific methyltransferase NgoBI) [Prevotella sp. oral taxon 317 str. F0108] Length = 309 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLN----PSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A DFG+PQ+RER+ I+ F + + +F F + + E+ ID K S Sbjct: 142 LNAMDFGLPQKRERVIIVGFRDKMAYENFDFTFKKKPFNLATILEE-EKDIDPKLYASKT 200 Query: 57 LWEGHQ 62 + E + Sbjct: 201 IREKRK 206 >gi|325955715|ref|YP_004293189.1| modification methylase BsuRI [Lactobacillus acidophilus 30SC] gi|325334695|gb|ADZ08248.1| modification methylase BsuRI [Lactobacillus acidophilus 30SC] Length = 406 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 15/99 (15%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE-FKF--PTPLGIKPRLGDI--LEEHIDDKSTISNK 56 A D+GVPQ RER++++ N + F++ P P L+E I D Sbjct: 225 NAKDYGVPQSRERVFLVGVRNDIADKFQYTVPEPTNGPDTDKPYITLKEAISDLPEHPAD 284 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTL--SAR 93 +EG ++ K + + T+ SAR Sbjct: 285 YFEGTYSSIYMSRNRKKSW--------DDVSFTIQASAR 315 >gi|108562472|ref|YP_626788.1| cytosine specific DNA methyltransferase [Helicobacter pylori HPAG1] gi|107836245|gb|ABF84114.1| cytosine specific DNA methyltransferase [Helicobacter pylori HPAG1] Length = 355 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 29/89 (32%), Gaps = 2/89 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI--LEEHIDDKSTISNKLW 58 + A D+GVPQ RER +I+ S +FK P I L ++ + Sbjct: 153 LNAKDYGVPQNRERAFIVGASRFSFDFKLLEPSQSVNVQDAISDLAYLCSNEGAFESDYL 212 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATT 87 Q + Y N + Sbjct: 213 NHIQSSYQALMRKNSPKLYNHKATNHSQA 241 >gi|315604954|ref|ZP_07880010.1| modification methylase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313349|gb|EFU61410.1| modification methylase [Actinomyces sp. oral taxon 180 str. F0310] Length = 322 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 2/69 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTP-LGIKPRLGDILEEHIDDKSTISNKLW 58 + A DFGVPQ R R+ + F + + F++P+P P +G+ L + + ++ W Sbjct: 147 LNASDFGVPQLRPRVIAVGFRHDTAPSFEYPSPFQNAAPTVGETLADLMAERGWEGASAW 206 Query: 59 EGHQKRKEN 67 R Sbjct: 207 AAQANRIAP 215 >gi|258514794|ref|YP_003191016.1| DNA-cytosine methyltransferase [Desulfotomaculum acetoxidans DSM 771] gi|257778499|gb|ACV62393.1| DNA-cytosine methyltransferase [Desulfotomaculum acetoxidans DSM 771] Length = 402 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 9/67 (13%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 A D+GVPQ R R+ I+ F N + + FP + D L K IS + WE Sbjct: 181 NAADYGVPQSRHRVIIVGFRNDLNANWSFPDATHSQ----DALRY---SKW-ISGEYWEE 232 Query: 61 HQKRKEN 67 H+ K Sbjct: 233 HKIAKAK 239 >gi|260642764|ref|ZP_05417219.2| modification methylase NgoMIV [Bacteroides finegoldii DSM 17565] gi|260620609|gb|EEX43480.1| modification methylase NgoMIV [Bacteroides finegoldii DSM 17565] Length = 327 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKP 37 + A D+GVPQ R R+ II + F FP + K Sbjct: 144 LNASDYGVPQLRPRVIIIGIRRDLADVFMFPEKIPEKT 181 >gi|167920593|ref|ZP_02507684.1| cytosine-specific DNA methylase [Burkholderia pseudomallei BCC215] Length = 454 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 34/62 (54%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + +FG+PQ RER+YI+ P F++P + + IL+++ DD +S ++ E Sbjct: 149 LSPHNFGIPQIRERVYIVGSTEPLTSFQWPEMIDATTSIETILDKNPDDARQLSAQVKEC 208 Query: 61 HQ 62 + Sbjct: 209 LE 210 >gi|126698504|ref|YP_001087401.1| putative DNA methylase [Clostridium difficile 630] gi|115249941|emb|CAJ67761.1| putative phage DNA modification methylase [Clostridium difficile] Length = 357 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 35/94 (37%), Gaps = 3/94 (3%) Query: 1 MKACDFGVPQRRERLYIID-FLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + +FGVPQ RER++I+ F S FP + L + Sbjct: 150 LNSKNFGVPQNRERIFIVGHFRGRSTRKVFPIERKSRKNLEQLNNPTHSTNRIYDAVGIA 209 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + A G + +NS T++AR Sbjct: 210 RCIRSQAGGGGAKTGLYFIDLNKNSKV--TINAR 241 >gi|308185228|ref|YP_003929361.1| DNA-cytosine methyltransferase [Helicobacter pylori SJM180] gi|308061148|gb|ADO03044.1| DNA-cytosine methyltransferase [Helicobacter pylori SJM180] Length = 368 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 31/117 (26%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEH------------ 46 + A ++G+PQ R RL+++ F F FP+P + + D+L+++ Sbjct: 187 LDARNYGIPQGRRRLFLVGFKEQEKCANFTFPSPKELTITMQDLLQDNIKEGNLLSKNAI 246 Query: 47 -----------IDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 +D+K +S KL + K F + + L + Sbjct: 247 LDTKSFLGGELVDEKYFLSEKLLKY------CLSAGTKNFYHADAKIDLPIARALLS 297 >gi|67922668|ref|ZP_00516173.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] gi|67855516|gb|EAM50770.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] Length = 282 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 5/94 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFP--TPLGIKPRLGDILEEHIDDKSTISNKL- 57 + A D+GVPQ R R+ + + EF FP K + + ++ T Sbjct: 153 LLASDYGVPQNRRRVIFVGVPK-NYEFNFPIGDFTENKITCSQAMNDLPEESMTDGEPYP 211 Query: 58 WEGHQKRKENNKIAGKG-FGYGLFFENSATTNTL 90 ++ +I + + + + T NT+ Sbjct: 212 INPLSSYQKLMRIGSDQVYNHQITKHSQKTINTI 245 >gi|297621903|ref|YP_003710040.1| C-5 cytosine-specific DNA methylase [Waddlia chondrophila WSU 86-1044] gi|297377204|gb|ADI39034.1| C-5 cytosine-specific DNA methylase [Waddlia chondrophila WSU 86-1044] Length = 410 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 20/103 (19%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 +K+ + VPQ+RERL+I+ N V +FK+P+P L D L++ S+ Sbjct: 220 LKSIFYQVPQKRERLFIVGVRNDLVKKAKFKWPSPFKKVLTLKDALKQG---SLYDSDVP 276 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSE 100 Q + K G Y+KD SE Sbjct: 277 TSNGQLYPQRKKEILSHVPQG--------------GYWKDLSE 305 >gi|58580230|ref|YP_199246.1| modification methylase XorII [Xanthomonas oryzae pv. oryzae KACC10331] gi|58424824|gb|AAW73861.1| Modification methylase XorII [Xanthomonas oryzae pv. oryzae KACC10331] Length = 442 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 3/74 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+GVPQ R RL ++ +P P G + +GD + + D +S +LWE Sbjct: 173 LNAADYGVPQDRRRLILMGARKGLPLPAYPEPTG-RTTVGDAIGDIPDAESF--PELWER 229 Query: 61 HQKRKENNKIAGKG 74 + + K + Sbjct: 230 DWVKAKYGKPSTYA 243 >gi|62297515|sp|P52311|MTX2_XANOR RecName: Full=Modification methylase XorII; Short=M.XorII; AltName: Full=Cytosine-specific methyltransferase XorII Length = 424 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 3/74 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+GVPQ R RL ++ +P P G + +GD + + D +S +LWE Sbjct: 155 LNAADYGVPQDRRRLILMGARKGLPLPAYPEPTG-RTTVGDAIGDIPDAESF--PELWER 211 Query: 61 HQKRKENNKIAGKG 74 + + K + Sbjct: 212 DWVKAKYGKPSTYA 225 >gi|124262880|ref|YP_001023350.1| C-5 cytosine-specific DNA methylase [Methylibium petroleiphilum PM1] gi|124262126|gb|ABM97115.1| C-5 cytosine-specific DNA methylase [Methylibium petroleiphilum PM1] Length = 473 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 6/98 (6%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFP---TPLGIKPRLGDILEEHIDDKSTISNKLW 58 + ++ V + RERL ++ +EF F P + RLG+I++E D S Sbjct: 289 NSAEWNVLEHRERLCVVAVTKG-IEFSFDGLERPEPVSRRLGEIMDEVPVDAPCWSE--M 345 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 + ++ ++ G F + +S L+ +K Sbjct: 346 AYLKDKRARDEAKGNNFKMTVLTPDSEKVPCLNKSLWK 383 >gi|458402|gb|AAA50432.1| M-XorII [Xanthomonas oryzae] Length = 424 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 3/74 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+GVPQ R RL ++ +P P G + +GD + + D +S +LWE Sbjct: 155 LNAADYGVPQDRRRLILMGARKGLPLPAYPEPTG-RTTVGDAIGDIPDAESF--PELWER 211 Query: 61 HQKRKENNKIAGKG 74 + + K + Sbjct: 212 DWVKAKYGKPSTYA 225 >gi|24527986|emb|CAD33713.1| putative DNA methylase [Escherichia coli] Length = 310 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 29/98 (29%), Gaps = 5/98 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + D+GVPQ R R+ I+ F P + + Sbjct: 142 LNCADYGVPQTRMRVIILGVRKDLPDIENFPPPKTHEKEGINLPKWISVGQALQRFTEPR 201 Query: 58 WEGHQKRKENNKIAGKGFGY--GLFFENSATTNTLSAR 93 + K E++ G+ F + T++ R Sbjct: 202 VDSQFKNHEHSLYKLTFNGHLGHRFMDPDKPAPTVTGR 239 >gi|291530357|emb|CBK95942.1| DNA-methyltransferase (dcm) [Eubacterium siraeum 70/3] Length = 317 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 6/97 (6%) Query: 2 KACDFGVPQRRERLYIIDFLN--PSVEFKFPTPLGIKPRLGDILEEHI--DDKSTISNKL 57 ACD+G+PQ R R YI+ F + SV F FP ++ + D++++ D + Sbjct: 144 DACDYGIPQHRTRTYIVAFRDFAKSVLFDFPQKQQLQKHIFDVIDKRTKADKSFYLDCNS 203 Query: 58 WEGHQKRKENNKIAGKGFG--YGLFFENSATTNTLSA 92 + ++ ++ + YG+ TL A Sbjct: 204 RQYYKMKQSIDDNNQIYRFSDYGIQKSKDGICFTLKA 240 >gi|196037189|ref|ZP_03104504.1| modification methylase HaeIII [Bacillus cereus W] gi|195990293|gb|EDX54346.1| modification methylase HaeIII [Bacillus cereus W] Length = 415 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Query: 2 KACDFGVPQRRERLYIIDFLNP---SVEFKF--PTPLGIKPRLGDI-LEEHIDDKSTISN 55 + D+GVPQ RER++I+ N F++ P P + ++ + L++ I + + Sbjct: 232 NSRDYGVPQLRERVFIVGIRNDIHEKYGFEYEVPEPTHGEGKIPYVTLKDTISNLPLDAK 291 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFF 81 ++EG ++ K + F Sbjct: 292 DVYEGSFSSMYMSRNRKKNWNEQSFT 317 >gi|300869073|ref|ZP_07113674.1| Cytosine-specific methyltransferase (fragment) [Oscillatoria sp. PCC 6506] gi|300332930|emb|CBN58870.1| Cytosine-specific methyltransferase (fragment) [Oscillatoria sp. PCC 6506] Length = 345 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A +FG+PQ RER++II +F P+L D L+ D + +K Sbjct: 141 LNAKNFGLPQHRERIFIIGTKGKEFKFSKLK-TKFPPKLRDFLDVEGDFEILDRSKY 196 >gi|25011412|ref|NP_735807.1| hypothetical protein gbs1370 [Streptococcus agalactiae NEM316] gi|24412950|emb|CAD47029.1| unknown [Streptococcus agalactiae NEM316] Length = 450 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 3/83 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF VPQ RER+++I F FP P + L K +S ++ Sbjct: 148 LNSKDFQVPQNRERVFLIGHSRRYRPRFLFPLRREGSPTDIERLGNINPSKHGMSGQV-- 205 Query: 60 GHQKRKENNKIAGKGFGYGLFFE 82 GKG G + Sbjct: 206 YLTSGLAPTLTRGKGEGTKIAVP 228 >gi|237742048|ref|ZP_04572529.1| site-specific DNA-methyltransferase [Fusobacterium sp. 4_1_13] gi|229429696|gb|EEO39908.1| site-specific DNA-methyltransferase [Fusobacterium sp. 4_1_13] Length = 440 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 6/94 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A ++GVPQ R RL +I F N E K+P K L + L + + + + Sbjct: 189 LNASNYGVPQNRHRLILIGFRNDMKEPKYPKEFKQKVTLREALSDLTNYELD-----NKK 243 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARY 94 +Q + + + + N LS Y Sbjct: 244 YQNSSKKGRTKNIVTNETILEKK-KYNNDLSKHY 276 >gi|315639354|ref|ZP_07894516.1| DNA (cytosine-5-)-methyltransferase [Campylobacter upsaliensis JV21] gi|315480680|gb|EFU71322.1| DNA (cytosine-5-)-methyltransferase [Campylobacter upsaliensis JV21] Length = 320 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A + VPQ R+R+ II E +FP PL I+P+ L + I D ++ Sbjct: 147 LNANAYAVPQNRKRVIIIGRRKDIKREVEFPKPLNIEPKT---LFQAIGDLPKDYDENIS 203 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 H +KI G+ + T++ R Sbjct: 204 NHTG--STHKIRINGYIGNRALSWDKSAPTITGR 235 >gi|315506801|ref|YP_004085688.1| DNA-cytosine methyltransferase [Micromonospora sp. L5] gi|315413420|gb|ADU11537.1| DNA-cytosine methyltransferase [Micromonospora sp. L5] Length = 412 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 1 MKACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 ++A D+GVPQ R R ++ + F +P P G P +GD L E + ++ + W Sbjct: 148 LQASDYGVPQLRPRFILVALKTEDAPYFHWPEPQGAPPTVGDTLVELMAERGWRGAQAWA 207 >gi|269976808|ref|ZP_06183783.1| DNA methyltransferase Cfr42I [Mobiluncus mulieris 28-1] gi|269935005|gb|EEZ91564.1| DNA methyltransferase Cfr42I [Mobiluncus mulieris 28-1] Length = 404 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 5/59 (8%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 A D+GVPQRR R++++ F + + FP P L D Sbjct: 183 DAADYGVPQRRHRVFMVGFRSDVDAGWSFPAPTHS----ASALRAAQDSGEYWERHRIA 237 >gi|110643909|ref|YP_671639.1| putative type II 5-cytosoine methyltransferase [Escherichia coli 536] gi|110345501|gb|ABG71738.1| putative type II 5-cytosoine methyltransferase [Escherichia coli 536] Length = 305 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 29/98 (29%), Gaps = 5/98 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + D+GVPQ R R+ I+ F P + + Sbjct: 137 LNCADYGVPQTRMRVIILGVRKDLPDIENFPPPKTHEKEGINLPKWISVGQALQRFTEPR 196 Query: 58 WEGHQKRKENNKIAGKGFGY--GLFFENSATTNTLSAR 93 + K E++ G+ F + T++ R Sbjct: 197 VDSQFKNHEHSLYKLTFNGHLGHRFMDPDKPAPTVTGR 234 >gi|295110825|emb|CBL24778.1| DNA-methyltransferase (dcm) [Ruminococcus obeum A2-162] Length = 311 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 6/98 (6%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE---FKFPTPL-GIKPRLGDILEEHID--DKSTISN 55 ++GVPQ R+R+ II E F+FP P + D D + Sbjct: 143 NMANYGVPQTRQRVLIIGQRKDYGEEMLFQFPQPTFSKDGKDLPRWISIKDAIDHFPDPD 202 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 K+ + + + + + T+ AR Sbjct: 203 TENNVINHIYSAYKVEYRNYTGHRKTDPNKPSPTILAR 240 >gi|116627564|ref|YP_820183.1| site-specific DNA methylase [Streptococcus thermophilus LMD-9] gi|116100841|gb|ABJ65987.1| Site-specific DNA methylase [Streptococcus thermophilus LMD-9] Length = 406 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 28/89 (31%), Gaps = 1/89 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A ++GVPQ RER+ II FP P P ++ + + + Sbjct: 147 LNAAEYGVPQARERVIIIGNRIGIDN-PFPKPTHKIPDENELDLFPELPDAITTEEAIGF 205 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNT 89 + N + +T Sbjct: 206 LADVELQNGKIADHIVVDGRKIYNHIAST 234 >gi|328946815|gb|EGG40952.1| modification methylase DdeI [Streptococcus sanguinis SK1087] Length = 387 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 29/101 (28%), Gaps = 11/101 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIK--------PRLGDILEEHIDD 49 + A DFGVPQ RER+++I E+ FP + IL + Sbjct: 169 INAKDFGVPQNRERVFLIGIRKDLKIKFEWTFPEETTLNNEITLRDAISDLPILGNNEQK 228 Query: 50 KSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTL 90 + I E + N L Sbjct: 229 NNYICEPRTEYQALLRGNQTELLNHVSRNHGERLQKIMRAL 269 >gi|160939240|ref|ZP_02086591.1| hypothetical protein CLOBOL_04134 [Clostridium bolteae ATCC BAA-613] gi|158438203|gb|EDP15963.1| hypothetical protein CLOBOL_04134 [Clostridium bolteae ATCC BAA-613] Length = 366 Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 32/100 (32%), Gaps = 5/100 (5%) Query: 2 KACDFGVPQRRERLYIID-FLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + D+GVPQ RER+YII S FP K I+ + + + Sbjct: 149 NSKDYGVPQSRERVYIIGDLTGRSTGKIFPLRSPGKTAPAQIIGGPQGSRIYDTGGVSPT 208 Query: 61 HQKRKENNKIAGKGFGYGLFFEN----SATTNTLSARYYK 96 + ++ + T+ A Y K Sbjct: 209 ITSGTGGLGAKTGLYFVAKDEQSGLVTKPYSGTIDASYGK 248 >gi|256545597|ref|ZP_05472956.1| modification methylase HaeIII (cytosine-specificmethyltransferase HaeIII) [Anaerococcus vaginalis ATCC 51170] gi|256398722|gb|EEU12340.1| modification methylase HaeIII (cytosine-specificmethyltransferase HaeIII) [Anaerococcus vaginalis ATCC 51170] Length = 340 Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKF-PTPLGIKPRLGDILEEHIDDKSTISNK 56 + A D+GVPQ R+R++ + F ++ F P P K D + + D+ K Sbjct: 142 LNASDYGVPQDRKRVFYVGFRKDLNISFDLPPKPYDYKLTFRDAIYDLKDNAIPALEK 199 >gi|309379398|emb|CBX21965.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 223 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 7 GVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQKRK 65 G PQ RER++++ F P + F+FP + ++ + D LE++ D K + K + K Sbjct: 2 GFPQHRERIFVVGFHTPPINGFQFPEKIELEHTMQDFLEDYTDSKYFLREKGVKFVTSSK 61 Query: 66 ENNKIAGKGFGY 77 K + G Sbjct: 62 NRQKRYTQINGE 73 >gi|317010333|gb|ADU84080.1| cytosine specific DNA methyltransferase [Helicobacter pylori SouthAfrica7] Length = 361 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 30/89 (33%), Gaps = 2/89 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI--LEEHIDDKSTISNKLW 58 + A D+GVPQ RER +I+ + S +F P I L ++ + Sbjct: 153 LNAKDYGVPQSRERAFIVGATHFSFDFDLLEPSQSVSVQEAISDLAYLHSNEGAFESDYL 212 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATT 87 Q + Y N + + Sbjct: 213 NPIQSNYQALMRKNSPKLYNHQATNHSQS 241 >gi|254456253|ref|ZP_05069682.1| Cytosine-specific methyltransferase HphIA [Candidatus Pelagibacter sp. HTCC7211] gi|207083255|gb|EDZ60681.1| Cytosine-specific methyltransferase HphIA [Candidatus Pelagibacter sp. HTCC7211] Length = 342 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTP 32 + + D+GVPQ R R++I+ + +F+FP P Sbjct: 144 LNSADYGVPQIRHRVFIVGIKKELNKKFEFPKP 176 >gi|126658057|ref|ZP_01729209.1| DNA cytosine methylase [Cyanothece sp. CCY0110] gi|126620695|gb|EAZ91412.1| DNA cytosine methylase [Cyanothece sp. CCY0110] Length = 358 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 13/101 (12%) Query: 1 MKACDFGVPQRRERLYIIDF----LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A F +PQ RER+YI+ F L VEF FP + +E ++ + +IS Sbjct: 181 LDAALFNLPQVRERIYIVGFCRDYLKERVEFNFPVGRKNNVFIDQFIETNV-EGYSISKH 239 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSAT-TNTLSARYYK 96 L + + +K++ + + +NS T + Y+K Sbjct: 240 LQKTYLFKKDDGRP-------QIVDQNSKVKVKTFVSTYHK 273 >gi|294673665|ref|YP_003574281.1| prophage PRU01 DNA methylase, C-5 cytosine-specific family [Prevotella ruminicola 23] gi|294471747|gb|ADE81136.1| prophage PRU01, DNA methylase, C-5 cytosine-specific family [Prevotella ruminicola 23] Length = 330 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 12/83 (14%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 A D+GV Q R+R++ I F N +++FKFP + K T+ + +W+ Sbjct: 145 NAKDYGVAQERKRVFYIGFRNDLNIDFKFPEGSTRDDK----------KKITLRDIIWD- 193 Query: 61 HQKRKENNKIAGKGFGYGLFFEN 83 + + Sbjct: 194 LKDSAVPALEKNHHNPEAINNNE 216 >gi|261837515|gb|ACX97281.1| cytosine-methyltransferase [Helicobacter pylori 51] Length = 355 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 153 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 187 >gi|261838928|gb|ACX98693.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori 52] Length = 355 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 153 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 187 >gi|210134246|ref|YP_002300685.1| cytosine specific DNA methyltransferase [Helicobacter pylori P12] gi|210132214|gb|ACJ07205.1| cytosine specific DNA methyltransferase [Helicobacter pylori P12] Length = 355 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 153 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 187 >gi|188526860|ref|YP_001909547.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori Shi470] gi|188143100|gb|ACD47517.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori Shi470] Length = 355 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 153 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 187 >gi|317179558|dbj|BAJ57346.1| cytosine specific DNA methyltransferase [Helicobacter pylori F30] Length = 355 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 153 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 187 >gi|49476997|ref|YP_035183.1| modification methylase DdeI; cytosine-specific methyltransferase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328553|gb|AAT59199.1| modification methylase DdeI; possible cytosine-specific methyltransferase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 450 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 36/91 (39%), Gaps = 12/91 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLG----------DILEEHID 48 + ++GVPQ RER++I+ N F +P L D+ + ++ Sbjct: 193 LNCANYGVPQNRERVFIVGINNKYENTYFSYPQQTHGSDYLMPVVTVGQAILDLPDVNVL 252 Query: 49 DKSTISNKLWEGHQKRKENNKIAGKGFGYGL 79 +++ + + + + ++ F G+ Sbjct: 253 EENEVYEQDNNYIENIDDPSRKNFLKFVRGI 283 >gi|257438608|ref|ZP_05614363.1| modification methylase NgoMIV [Faecalibacterium prausnitzii A2-165] gi|257198937|gb|EEU97221.1| modification methylase NgoMIV [Faecalibacterium prausnitzii A2-165] Length = 293 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFP-TPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A D+GVPQ R R+ I+ F++P P +G+ L + + K W Sbjct: 124 LNASDYGVPQLRPRVVIVGIRKDQAGAFEYPQEHPRESPTVGETLCDLMSQNGWKGAKKW 183 Query: 59 E 59 Sbjct: 184 A 184 >gi|237728463|ref|ZP_04558944.1| DNA-cytosine methyltransferase [Citrobacter sp. 30_2] gi|226909941|gb|EEH95859.1| DNA-cytosine methyltransferase [Citrobacter sp. 30_2] Length = 318 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGI-KPRLGDILEEHIDDKSTISNKLW 58 + A D+GV Q R R+ + F +P PL P +G++L + + W Sbjct: 145 LNASDYGVSQLRPRVVFVGIRKDLAAGFSWPEPLKTEPPTVGELLHDLMAANGWRGADRW 204 >gi|225571452|ref|ZP_03780448.1| hypothetical protein CLOHYLEM_07550 [Clostridium hylemonae DSM 15053] gi|225159928|gb|EEG72547.1| hypothetical protein CLOHYLEM_07550 [Clostridium hylemonae DSM 15053] Length = 377 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFG+PQ+RER+ II + + K L DILE+ ID K S ++ Sbjct: 222 LNALDFGLPQKRERIIIIGSKK-PFLMDWTFNVEKKKTLDDILEKDIDKKHYASPEIVAK 280 Query: 61 HQKR 64 + + Sbjct: 281 RKAK 284 >gi|309809233|ref|ZP_07703103.1| modification methylase HaeIII [Lactobacillus iners SPIN 2503V10-D] gi|308170467|gb|EFO72490.1| modification methylase HaeIII [Lactobacillus iners SPIN 2503V10-D] Length = 340 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKF-PTPLGIKPRLGDILEEHIDDKSTISNK 56 + A D+GVPQ R+R++ + F ++ F P P K D + + D+ K Sbjct: 142 LNASDYGVPQDRKRVFYVGFRKDLNINFDIPPKPYDYKLTFRDAIYDLKDNAIPALEK 199 >gi|134287405|ref|YP_001110788.1| putative cytosine-C5 specific DNA methylase [Clostridium phage phiC2] gi|93117243|gb|ABE99533.1| putative cytosine-C5 specific DNA methylase [Clostridium phage phiC2] Length = 316 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 35/94 (37%), Gaps = 3/94 (3%) Query: 1 MKACDFGVPQRRERLYIID-FLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + +FGVPQ RER++I+ F S FP + L + Sbjct: 133 LNSKNFGVPQNRERIFIVGHFRGRSTRKVFPIERKSRKNLEQLNNPTHSTNRIYDAVGIA 192 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + A G + +NS T++AR Sbjct: 193 RCIRSQAGGGGAKTGLYFIDLNKNSKV--TINAR 224 >gi|308062920|gb|ADO04807.1| cytosine specific DNA methyltransferase [Helicobacter pylori Sat464] Length = 355 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 153 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 187 >gi|226324849|ref|ZP_03800367.1| hypothetical protein COPCOM_02636 [Coprococcus comes ATCC 27758] gi|225207297|gb|EEG89651.1| hypothetical protein COPCOM_02636 [Coprococcus comes ATCC 27758] Length = 473 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 35/112 (31%), Gaps = 16/112 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDIL-------EEHIDDKST 52 + + DFGVPQ RER +I+ L K FP + D+ Sbjct: 176 LNSKDFGVPQNRERCFIVGHLRGRGSAKVFPVERADGENSVSLNLFGCLNGRNSQRDRVY 235 Query: 53 ISNKLWEGHQKRKENNKIAGKG--FGYGLFFENSAT------TNTLSARYYK 96 S L + N F ++ TL++R YK Sbjct: 236 SSEGLAPTISTKPGGNTEPKVPIIFDTSYIGQDEKVREYEGICPTLTSRDYK 287 >gi|217032842|ref|ZP_03438321.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128] gi|298737011|ref|YP_003729541.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] gi|216945425|gb|EEC24089.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128] gi|298356205|emb|CBI67077.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] Length = 361 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 153 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 187 >gi|15644682|ref|NP_206852.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori 26695] gi|2313124|gb|AAD07117.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori 26695] Length = 355 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 153 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 187 >gi|291539766|emb|CBL12877.1| DNA-methyltransferase (dcm) [Roseburia intestinalis XB6B4] Length = 366 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 33/89 (37%), Gaps = 8/89 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP---LGIKPRLGDILEEHID-----DKST 52 + A D+G+PQ R+R++ + + +F+FP P + + + + Sbjct: 155 LYAPDYGIPQMRKRVFFVGLRDGKTKFEFPEPVVDKEHYVTCEEAIGDLPSLQTEKGEII 214 Query: 53 ISNKLWEGHQKRKENNKIAGKGFGYGLFF 81 ++ + K + + + + Sbjct: 215 YGEEIQDYTMKPANSYQRKMRSNSGKVLN 243 >gi|17225517|gb|AAL37447.1|AF328915_1 cytosine-specific DNA methyltransferase [Helicobacter pylori] Length = 361 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 153 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 187 >gi|15894505|ref|NP_347854.1| DNA-methyltransferase (cytosine-specific) [Clostridium acetobutylicum ATCC 824] gi|15024146|gb|AAK79194.1|AE007635_8 DNA-methyltransferase (cytosine-specific) [Clostridium acetobutylicum ATCC 824] gi|325508636|gb|ADZ20272.1| DNA-methyltransferase (cytosine-specific) [Clostridium acetobutylicum EA 2018] Length = 314 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 12/94 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHIDDKSTISNKLWE 59 + A DFG+PQRRER++ I L+ +F F L L+ ++D+ T++ Sbjct: 154 LNAMDFGLPQRRERVFTISCLDGK-KFDFDKLEHRKLRPLSSFLQTNVDEYYTVTQPSI- 211 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 A G T++ R Sbjct: 212 ---------LRAIGKKGVSRATIIKDYCYTITTR 236 >gi|308061350|gb|ADO03238.1| cytosine specific DNA methyltransferase [Helicobacter pylori Cuz20] Length = 355 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 153 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 187 >gi|308235652|ref|ZP_07666389.1| DcmB [Gardnerella vaginalis ATCC 14018] gi|311115197|ref|YP_003986418.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis ATCC 14019] gi|310946691|gb|ADP39395.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis ATCC 14019] Length = 333 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 12/83 (14%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 A D+GV Q R+R++ I F +++F FP E + K T+ + +W+ Sbjct: 149 NAKDYGVAQDRKRVFYIGFRKDLNIKFSFPKGS----------TEDDEKKLTLKDVIWD- 197 Query: 61 HQKRKENNKIAGKGFGYGLFFEN 83 Q + + Sbjct: 198 LQDTAIPARERNHHNPVAINNNE 220 >gi|228469860|ref|ZP_04054799.1| modification methylase HaeIII [Porphyromonas uenonis 60-3] gi|228308495|gb|EEK17283.1| modification methylase HaeIII [Porphyromonas uenonis 60-3] Length = 359 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + A D+ VP+ R+R++ I F EF+FP P+ + L D + + D + + Sbjct: 146 LNAYDYEVPEDRKRVFYIGFRKDLDIKEFEFPVPIPKRLTLRDAIWDLRDTAISARD 202 >gi|294155584|ref|YP_003559968.1| CpG cytosine-specific DNA modification methyltransferase [Mycoplasma crocodyli MP145] gi|291600126|gb|ADE19622.1| CpG cytosine-specific DNA modification methyltransferase [Mycoplasma crocodyli MP145] Length = 176 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 39/102 (38%), Gaps = 11/102 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 M + D+ Q RER++ + FL + F+FP + +++++ I+D + + + Sbjct: 1 MNSKDYNSAQNRERVFAVSFLGEN-NFEFPKINSKPKTIKEVIKQSINDNNVDLSHMLNK 59 Query: 61 HQK----------RKENNKIAGKGFGYGLFFENSATTNTLSA 92 ++ K ++ TL+A Sbjct: 60 YKTSSFTKSNNNIIKSKLLDYTSFNSEAYIYDLDGLGPTLTA 101 >gi|153933427|ref|YP_001385281.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. ATCC 19397] gi|153933974|ref|YP_001384769.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. ATCC 19397] gi|153935154|ref|YP_001386762.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] gi|153935271|ref|YP_001386815.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] gi|153937696|ref|YP_001388073.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] gi|152929471|gb|ABS34971.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. ATCC 19397] gi|152930018|gb|ABS35518.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. ATCC 19397] gi|152931068|gb|ABS36567.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] gi|152931185|gb|ABS36684.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] gi|152933610|gb|ABS39109.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] Length = 315 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 39/92 (42%), Gaps = 9/92 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++ I L+ F P + + LE+ ++K ++ Sbjct: 149 LNALDFGLPQKRERVFTISCLDGTLFNFNALE-RKKAPHIREFLEDTQEEKYIVTQP--- 204 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 K+ + G G + +T++ Sbjct: 205 --SMLKKMHDKNGNFGGR--VEVINDCCSTIT 232 >gi|17225496|gb|AAL37432.1|AF328909_1 putative cytosine-specific DNA methyltransferase [Helicobacter pylori] gi|17225522|gb|AAL37451.1|AF328916_1 cytosine-specific DNA methyltransferase [Helicobacter pylori] Length = 361 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 153 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 187 >gi|308183851|ref|YP_003927984.1| cytosine specific DNA methyltransferase [Helicobacter pylori SJM180] gi|308059771|gb|ADO01667.1| cytosine specific DNA methyltransferase [Helicobacter pylori SJM180] Length = 355 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 153 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 187 >gi|323152708|gb|EFZ38980.1| DNA-cytosine methyltransferase [Escherichia coli EPECa14] Length = 374 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 14/97 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP----RLGDILEEHIDDKSTI 53 + F +PQ RER+ ++ F +F P L +L+ ++ K + Sbjct: 266 IDGKHF-LPQHRERIVLVGFRRDLNLKADFTLRDISKCFPAQRVTLAQLLDPMVEAKYIL 324 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTL 90 + LW+ + +N + A F T+ Sbjct: 325 TPVLWKYLYRYAKNIRRAVTASVMEWF------IRTI 355 >gi|167854495|ref|ZP_02477276.1| cyclic 3',5'-adenosine monophosphate phosphodiesterase [Haemophilus parasuis 29755] gi|219872138|ref|YP_002476513.1| DNA-cytosine methyltransferase/C-5 cytosine-specific DNA methylase [Haemophilus parasuis SH0165] gi|167854250|gb|EDS25483.1| cyclic 3',5'-adenosine monophosphate phosphodiesterase [Haemophilus parasuis 29755] gi|219692342|gb|ACL33565.1| DNA-cytosine methyltransferase/C-5 cytosine-specific DNA methylase [Haemophilus parasuis SH0165] Length = 320 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 16/88 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + ++GVPQ RER+ I+ N EF FP + S + W Sbjct: 158 LNTANYGVPQTRERVIIVGVRNDLTSEFFFPRETHSD-----------SEDLFQSTEKWV 206 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATT 87 ++ + + K F NS + Sbjct: 207 DLKRAIGDLENDEKHFSL----PNSGYS 230 >gi|265751237|ref|ZP_06087300.1| DNA-cytosine methyltransferase [Bacteroides sp. 3_1_33FAA] gi|270294602|ref|ZP_06200804.1| DNA-cytosine methyltransferase [Bacteroides sp. D20] gi|263238133|gb|EEZ23583.1| DNA-cytosine methyltransferase [Bacteroides sp. 3_1_33FAA] gi|270276069|gb|EFA21929.1| DNA-cytosine methyltransferase [Bacteroides sp. D20] Length = 335 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 17/88 (19%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A D+ VP+ R+R++ I F +F++PTPL KP L + + + Sbjct: 144 LNANDYDVPEDRDRVFYIGFRKDLDIHDFEYPTPLKHKPTLRESIWD------------- 190 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSAT 86 Q K G N+ Sbjct: 191 --LQDSAIPALEKNKTNGNACKVPNNEY 216 >gi|317176866|dbj|BAJ54655.1| cytosine specific DNA methyltransferase [Helicobacter pylori F16] Length = 215 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 13 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 47 >gi|297379273|gb|ADI34160.1| Modification methylase [Helicobacter pylori v225d] Length = 222 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 20 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 54 >gi|317012300|gb|ADU82908.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori Lithuania75] Length = 348 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER+ ++ L +F P P+ L D L + +S + Sbjct: 145 LNALDYGVPQIRERVILVGTLKSFKQKFHSPKPIKTHFSLKDALGDLPPIQSGENGDALG 204 Query: 60 GHQK 63 + Sbjct: 205 YLKN 208 >gi|294673126|ref|YP_003573742.1| C-5 cytosine-specific family DNA methylase [Prevotella ruminicola 23] gi|294473536|gb|ADE82925.1| DNA methylase, C-5 cytosine-specific family [Prevotella ruminicola 23] Length = 342 Score = 57.7 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 16/35 (45%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK 36 A ++GVPQ R+R + +F FP + Sbjct: 156 NAANYGVPQIRQRFICVGVRKDMPDFIFPEETHSE 190 >gi|462651|sp|P34906|MTF1_FUSNU RecName: Full=Modification methylase FnuDI; Short=M.FnuDI; AltName: Full=Cytosine-specific methyltransferase FnuDI gi|2961231|gb|AAC05695.1| FnuDI DNA modification methyltransferase [Fusobacterium nucleatum] Length = 344 Score = 57.7 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 18/96 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A D+GV Q RER++ + F F+FP P+ ++ + + +W Sbjct: 142 LNAFDYGVAQDRERVFYVGFRKDLNISNFEFPYPISE------------KERKYLKDSIW 189 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARY 94 + + K K EN L+ Y Sbjct: 190 D-LKDNALPGKDKNKTNADDCIVENHEY---LTGSY 221 >gi|296393765|ref|YP_003658649.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985] gi|296180912|gb|ADG97818.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985] Length = 393 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 15/98 (15%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 A D+GVPQRR R++I+ F + + FP+P + ++ + Sbjct: 182 DAADYGVPQRRHRVFIVGFRSDVRAGWAFPSPTHSG------------EALRLAQVRGDY 229 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 ++ + K G + T+ R DG Sbjct: 230 FERHRVRAKDRVVIRQPGQGDPDLLPWRTV--RDALDG 265 >gi|535137|emb|CAA56493.1| type II DNA-methyltransferase [Bacillus phage phi3T] Length = 326 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLG 34 A D+GV Q+RER++I+ N +F FP PL Sbjct: 156 NAWDYGVAQKRERVFIVGVRNDLGFKFDFPNPLE 189 >gi|325979448|ref|YP_004289164.1| DNA (cytosine-5-)-methyltransferase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325179376|emb|CBZ49420.1| DNA (cytosine-5-)-methyltransferase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 333 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILEEHIDD 49 + A DFGV Q+RER+ ++ N F++P KP L D+L + Sbjct: 151 LNAWDFGVAQKRERMIMVGIRNDLANKTSFEYPEAHAYKPVLRDVLMDCPPS 202 >gi|206975132|ref|ZP_03236046.1| modification methylase HaeIII [Bacillus cereus H3081.97] gi|206746553|gb|EDZ57946.1| modification methylase HaeIII [Bacillus cereus H3081.97] Length = 352 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 5/91 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFGVPQ R+R II + +FP P K + D + + +S N++ + Sbjct: 150 LNAADFGVPQNRKRAVIIGKRGLAPA-EFPKPKNEKNTIWDAISDLAFLESGEGNEVQDY 208 Query: 61 HQ----KRKENNKIAGKGFGYGLFFENSATT 87 + ++ + + +S Sbjct: 209 RKAAESFYQQVMRKKSTQLYNHVATNHSKVA 239 >gi|186683211|ref|YP_001866407.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102] gi|14594714|gb|AAK68647.1| cytosine-specific DNA methyltransferase [Nostoc punctiforme PCC 73102] gi|186465663|gb|ACC81464.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102] Length = 421 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 4/93 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A ++GVPQ RERL++I K+P P+ P L + L +S +W+ Sbjct: 161 LNAANYGVPQSRERLFLIGAREDVELPKYPQPITK-PALPNNLTSKKISNIPLSPTVWDA 219 Query: 61 HQKRKE---NNKIAGKGFGYGLFFENSATTNTL 90 + E ++ + + G + + S L Sbjct: 220 IKDLPEIENYPELVARDWVVGEYEKPSNYARVL 252 >gi|29028380|gb|AAO64731.1| EcoT38I methyltransferase [Escherichia coli] Length = 363 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 41/103 (39%), Gaps = 10/103 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS----VEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + + DFGVPQ RER++ I F + + VE + P +G+I+ + +++ Sbjct: 147 LNSKDFGVPQNRERMFFIGFRSENDVKRVEAAIKKYQYLSPTVGEIIRPLGRAGNPNNSR 206 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFE------NSATTNTLSAR 93 + + + +F + +T++A Sbjct: 207 VCNARITNAAKPVLRKSPYAGMMFNGQGRPINPNGYASTIAAS 249 >gi|227874774|ref|ZP_03992927.1| DNA methyltransferase Cfr42I [Mobiluncus mulieris ATCC 35243] gi|227844549|gb|EEJ54705.1| DNA methyltransferase Cfr42I [Mobiluncus mulieris ATCC 35243] Length = 420 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 5/59 (8%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 A D+GVPQRR R++++ F + + FP P L + Sbjct: 199 DAADYGVPQRRHRVFMVGFRSDVDAGWNFPAPTHS----ASALRAAQESGEYWERHRIA 253 >gi|169832810|ref|YP_001694558.1| methyl transferase [Streptococcus pneumoniae Hungary19A-6] gi|168995312|gb|ACA35924.1| methyl transferase [Streptococcus pneumoniae Hungary19A-6] Length = 452 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 4/83 (4%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGD---ILEEHIDDKSTISNK 56 + + DFGVPQ RER++II FP + + IL KS +S K Sbjct: 148 LNSKDFGVPQNRERVFIIGHSRKKGTRLLFPFRREGQATNSETLKILGNLNPSKSGMSGK 207 Query: 57 LWEGHQKRKENNKIAGKGFGYGL 79 ++ + G+GF + Sbjct: 208 VYYSEGLAPTLVRSKGEGFKVAI 230 >gi|308182232|ref|YP_003926359.1| cytosine specific DNA methyltransferase [Helicobacter pylori PeCan4] gi|308064417|gb|ADO06309.1| cytosine specific DNA methyltransferase [Helicobacter pylori PeCan4] Length = 281 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 79 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 113 >gi|302383143|ref|YP_003818966.1| DNA-cytosine methyltransferase [Brevundimonas subvibrioides ATCC 15264] gi|302193771|gb|ADL01343.1| DNA-cytosine methyltransferase [Brevundimonas subvibrioides ATCC 15264] Length = 377 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 4/57 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A + GVPQ+RER++I+ F + S E+ FP + + Sbjct: 170 LNAANHGVPQKRERVFIVGFRSDLSTEWNFPAETH---SARALAWAQGPEGDYWDQH 223 >gi|315644199|ref|ZP_07897369.1| DNA-cytosine methyltransferase [Paenibacillus vortex V453] gi|315280574|gb|EFU43863.1| DNA-cytosine methyltransferase [Paenibacillus vortex V453] Length = 485 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 8/57 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLG-------IKPRLGDILEEHIDD 49 + + D+GVPQ RER+ ++ N ++++P P L D + + ++D Sbjct: 225 LNSRDYGVPQLRERVILVGVRNDIDFDYEYPEPSHGEGLGLNPYVTLRDAIGDLVED 281 >gi|110799020|ref|YP_694603.1| DNA-cytosine methyltransferase [Clostridium perfringens ATCC 13124] gi|110673667|gb|ABG82654.1| DNA-cytosine methyltransferase [Clostridium perfringens ATCC 13124] Length = 361 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 10/80 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLG------IKPRLGDILEEHIDDKS-- 51 + + ++GV Q+RER+ + + ++FP P + D+++E D K Sbjct: 173 LNSAEYGVAQKRERVIFVGIRKDLNKVYEFPNPTHGVGRKYPFVTVNDVIQELGDIKHNY 232 Query: 52 -TISNKLWEGHQKRKENNKI 70 S + + + + Sbjct: 233 VKYSEERLKYMKLIPKGGGN 252 >gi|319757724|gb|ADV69666.1| DNA-cytosine methyltransferase [Streptococcus suis JS14] Length = 451 Score = 57.7 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 3/83 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF VPQ RER++II F FP P + L K ++ ++ Sbjct: 148 LNSKDFQVPQNRERVFIIGHSRRYRSRFLFPLKRENSPAHLERLGNINPSKRGLNGEV-- 205 Query: 60 GHQKRKENNKIAGKGFGYGLFFE 82 GKG G + Sbjct: 206 YLTTGLAPTLTRGKGEGAKIAIP 228 >gi|317181351|dbj|BAJ59135.1| cytosine specific DNA methyltransferase [Helicobacter pylori F57] Length = 281 Score = 57.7 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 79 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 113 >gi|17225547|gb|AAL37468.1|AF328924_1 cytosine-specific DNA methyltransferase [Helicobacter pylori] Length = 234 Score = 57.7 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 32 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 66 >gi|332672853|gb|AEE69670.1| possible DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 83] Length = 281 Score = 57.7 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 79 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 113 >gi|218133430|ref|ZP_03462234.1| hypothetical protein BACPEC_01295 [Bacteroides pectinophilus ATCC 43243] gi|217990805|gb|EEC56811.1| hypothetical protein BACPEC_01295 [Bacteroides pectinophilus ATCC 43243] Length = 320 Score = 57.7 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 4/98 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + +FGVPQ RER++II L + P L ++ + ++ + Sbjct: 151 LNSKNFGVPQNRERVFIIANLRSRGRREILPLTGENAAALNQLIGGMQGYRVYGTDGISA 210 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT---LSARY 94 + + T+T L+ARY Sbjct: 211 TLVGNAGGVGAKTGLYFIDQSNHDPKITDTARCLTARY 248 >gi|154504826|ref|ZP_02041564.1| hypothetical protein RUMGNA_02336 [Ruminococcus gnavus ATCC 29149] gi|153794709|gb|EDN77129.1| hypothetical protein RUMGNA_02336 [Ruminococcus gnavus ATCC 29149] Length = 422 Score = 57.7 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 4/98 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + +FGVPQ RER++II L + P L ++ + ++ + Sbjct: 151 LNSKNFGVPQNRERVFIIANLRSRGRREILPLTGENAAALNQLIGGMQGYRVYGTDGISA 210 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT---LSARY 94 + + T+T L+ARY Sbjct: 211 TLVGNAGGVGAKTGLYFIDQSNHDPKITDTARCLTARY 248 >gi|153814253|ref|ZP_01966921.1| hypothetical protein RUMTOR_00462 [Ruminococcus torques ATCC 27756] gi|145848649|gb|EDK25567.1| hypothetical protein RUMTOR_00462 [Ruminococcus torques ATCC 27756] Length = 422 Score = 57.7 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 4/98 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + +FGVPQ RER++II L + P L ++ + ++ + Sbjct: 151 LNSKNFGVPQNRERVFIIANLRSRGRREILPLTGENAAALNQLIGGMQGYRVYGTDGISA 210 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT---LSARY 94 + + T+T L+ARY Sbjct: 211 TLVGNAGGVGAKTGLYFIDQSNHDPKITDTARCLTARY 248 >gi|119511191|ref|ZP_01630308.1| C-5 cytosine-specific DNA methylase [Nodularia spumigena CCY9414] gi|119464179|gb|EAW45099.1| C-5 cytosine-specific DNA methylase [Nodularia spumigena CCY9414] Length = 432 Score = 57.7 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A FGVPQ RERL+I+ N +P + + + + + + +S +WE Sbjct: 157 LNAAHFGVPQNRERLFILGCRNDLELPNYPEAITQRAKPK---KSGLPHELNLSPTVWEA 213 Query: 61 HQKRKENNK 69 Q E K Sbjct: 214 LQDLPEIEK 222 >gi|217034606|ref|ZP_03440014.1| hypothetical protein HP9810_903g31 [Helicobacter pylori 98-10] gi|216942961|gb|EEC22446.1| hypothetical protein HP9810_903g31 [Helicobacter pylori 98-10] Length = 281 Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 79 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 113 >gi|315586055|gb|ADU40436.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A] Length = 281 Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 79 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 113 >gi|254413051|ref|ZP_05026823.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196180215|gb|EDX75207.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 353 Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 14/99 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF-PTPLGIKPRL-----GDILEEHIDDKSTIS 54 + A D+GVPQRRERL+ + +K+ P P G++ + ++ Sbjct: 162 LNAADYGVPQRRERLFCVAHRGG---WKWHPKTHHNLPYTVGEALGELALIVPLNAKFLT 218 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + E +K ++ +K A + T++ R Sbjct: 219 PSMDEYIKKYEKASKC-----VRPRDLHLDAPSRTVTCR 252 >gi|90592696|ref|YP_529611.1| hypothetical protein CDBPCV119_gp60 [Clostridium phage phi CD119] gi|71482543|gb|AAX53484.1| hypothetical protein [Clostridium phage phi CD119] Length = 260 Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 3/94 (3%) Query: 1 MKACDFGVPQRRERLYIID-FLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + +FGVPQ RER++I+ F S FP L + Sbjct: 157 LNSKNFGVPQNRERIFIVGHFRGRSTRKVFPIERKSGKNLEQLNNPTHSTNRIYDAVGIA 216 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + A G + +NS T++AR Sbjct: 217 RCIRSQAGGGGAKTGLYFIDLNKNSKV--TINAR 248 >gi|317179856|dbj|BAJ57642.1| cytosine specific DNA methyltransferase [Helicobacter pylori F32] Length = 281 Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 79 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 113 >gi|254465219|ref|ZP_05078630.1| modification methylase XorII [Rhodobacterales bacterium Y4I] gi|206686127|gb|EDZ46609.1| modification methylase XorII [Rhodobacterales bacterium Y4I] Length = 437 Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DF VPQ R RL ++ + ++P + +P D L + D ++ ++LW Sbjct: 155 LNAADFCVPQDRHRLILMGTKKGAKLPEYPKVISKRPTCEDALGDLPDAETF--DELWSS 212 >gi|269114810|ref|YP_003302573.1| Cytosine-specific DNA methyltransferase/Type II site-specific deoxyribonuclease [Mycoplasma hominis] gi|268322435|emb|CAX37170.1| Cytosine-specific DNA methyltransferase/Type II site-specific deoxyribonuclease [Mycoplasma hominis ATCC 23114] Length = 553 Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 8/80 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A DFGVPQ+RERL I + F+FP KP + D+ + K Sbjct: 151 LNAWDFGVPQKRERLITIGVRQDLLSKISFEFPMEHSYKPTMRDVKLDINPSKDEC---- 206 Query: 58 WEGHQKRKENNKIAGKGFGY 77 + + KE GY Sbjct: 207 -QRYSDYKEKIFSLVPPGGY 225 >gi|321312120|ref|YP_004204407.1| cytosine-specific methyltransferase [Bacillus subtilis BSn5] gi|320018394|gb|ADV93380.1| cytosine-specific methyltransferase [Bacillus subtilis BSn5] Length = 380 Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 43/126 (34%), Gaps = 27/126 (21%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---F-----KFPTPLGIKPRLGDILEEHIDDKST 52 + + FGVPQ+RER++ + FL +V+ F K L DK+ Sbjct: 149 LNSSHFGVPQKRERIFFVGFLEKNVDSNLFISRLEKKRKKPKSVREAISHLGPAGTDKNP 208 Query: 53 ISNKLWEGHQKR---KENNKIAGKGFGYGLFFENSATTNTLSAR--------------YY 95 ++ +++ G G +NTL A Y+ Sbjct: 209 LTCTAKITLAANPVLRKSPYAGMIFNGMGRPLNLEEASNTLPASMGGNKTPIIDEDLLYH 268 Query: 96 KDGSEI 101 GSEI Sbjct: 269 --GSEI 272 >gi|313675860|ref|YP_004053856.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] gi|312942558|gb|ADR21748.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] Length = 412 Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 +KA + VPQ+RERL ++ +EF +P P L D L++ S + L Sbjct: 218 LKAIQYRVPQKRERLILVGIRKDIDIEFLYPKPHKKIYNLKDALKKGPLFNSDVPKSLGA 277 Query: 60 GHQKRKENNKIAGKGFGY 77 + + K+ GY Sbjct: 278 KYPEYKKTILDLIPPKGY 295 >gi|261838450|gb|ACX98216.1| type II m5C methylase [Helicobacter pylori 51] Length = 318 Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 4/90 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q+RERLYI+ F F FP L D L+ D + Sbjct: 145 LNSADFQLAQKRERLYIVGFRKDLKHPFNFPLGLANDYCFKDFLDA---DNECYLDTNNA 201 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 Q+ N + F + +A +T Sbjct: 202 TFQRYLRNQYNHNRVFLENILTLENAVLDT 231 >gi|315029938|gb|EFT41870.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX4000] Length = 317 Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 6/94 (6%) Query: 1 MKACDFGVPQRRERLY-IIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+R+R++ I F +KP LG+ LE D K ++ Sbjct: 149 LNAMDFGIPQKRKRVFAISKLDGEPFNFDLLKHRPLKP-LGNFLEVTTDQKYLVTQPSM- 206 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 K +K + G + T++ R Sbjct: 207 ---LSKIRSKSSLANGFSGRLEVVNDFVYTITTR 237 >gi|322376648|ref|ZP_08051141.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus sp. M334] gi|321282455|gb|EFX59462.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus sp. M334] Length = 452 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 11/109 (10%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILE---EHIDDKSTISNK 56 + + DFGVPQ RER++II FP + +IL+ KS +S K Sbjct: 148 LNSKDFGVPQNRERVFIIGHSRKKGTRLLFPFRREGQATNSEILKTLGNLNPSKSGMSGK 207 Query: 57 LWEGHQKRKENNKIAGKGFGYGL----FFENSATTNTLSARYYKDGSEI 101 ++ + G+GF + N R +KD E+ Sbjct: 208 VYYSEGLAPTLVRGKGEGFKVAIPCMTPDRLDKRQN---GRRFKDNQEV 253 >gi|194337838|ref|YP_002019632.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme BU-1] gi|194310315|gb|ACF45015.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme BU-1] Length = 409 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 9/66 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER+ I+ S+ + FP + R +L + ++ + WE Sbjct: 170 INAADYGVPQTRERVVIVGTRADISLPWSFPIETHSEDR---LLWD-----MYVTGEYWE 221 Query: 60 GHQKRK 65 H+ K Sbjct: 222 RHKVHK 227 >gi|293371777|ref|ZP_06618187.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f] gi|292633229|gb|EFF51800.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f] Length = 459 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 7/99 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIK-PRLGDILEEHIDDKSTISNKLW 58 + A D+ +PQ R R++I+ F+ + FKFP P L + + ++ N+ Sbjct: 143 LNAADYCIPQDRFRVFIVGFIKELNGAFKFPEPSQKPLVTLQKAIGDITEEPHLYDNERV 202 Query: 59 EGHQKRKENNKIAGKGFGYGLFFEN-----SATTNTLSA 92 ++ N+ + F N + T+ A Sbjct: 203 NQEYEKWTNHDVFTGPFDTKFMARNRVRSWDEVSFTIQA 241 >gi|321156918|emb|CBW38908.1| putative DNA methylase [Streptococcus pneumoniae] Length = 452 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 4/83 (4%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILE---EHIDDKSTISNK 56 + + DFGVPQ RER++II S FP + +IL+ KS +S K Sbjct: 148 LNSKDFGVPQNRERVFIIGHSRKKSTRLLFPFRREGQATNSEILKTLGNLNPSKSGMSGK 207 Query: 57 LWEGHQKRKENNKIAGKGFGYGL 79 ++ + G+GF + Sbjct: 208 VYYSEGLAPTLVRGKGEGFKIAI 230 >gi|311221492|gb|ADP76553.1| DNA methyltransferase [Helicobacter pylori] Length = 587 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 153 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 187 >gi|109946722|ref|YP_663950.1| cytosine specific DNA methyltransferase fragment 2 [Helicobacter acinonychis str. Sheeba] gi|109713943|emb|CAJ98951.1| cytosine specific DNA methyltransferase fragment 2 [Helicobacter acinonychis str. Sheeba] Length = 101 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 19/35 (54%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ + S +F P Sbjct: 45 LNAKDYGVPQSRERAFIVGATHFSFDFNLLEPSQS 79 >gi|269122950|ref|YP_003305527.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM 12112] gi|268314276|gb|ACZ00650.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM 12112] Length = 328 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 28/79 (35%), Gaps = 1/79 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+GVPQ R+R++ I F KF P + D K T L + Sbjct: 142 LNASDYGVPQDRKRVFYIGFRKDL-NIKFDKPPKQYGYKVTFKDAIYDLKDTAIPALEKN 200 Query: 61 HQKRKENNKIAGKGFGYGL 79 + + + F Sbjct: 201 KTNGDKCKVLNHEYFIGAY 219 >gi|146318633|ref|YP_001198345.1| C-5 cytosine-specific DNA methylase [Streptococcus suis 05ZYH33] gi|146320840|ref|YP_001200551.1| C-5 cytosine-specific DNA methylase [Streptococcus suis 98HAH33] gi|253751755|ref|YP_003024896.1| C-5 cytosine-specific DNA methylase [Streptococcus suis SC84] gi|253755540|ref|YP_003028680.1| C-5 cytosine-specific DNA methylase [Streptococcus suis BM407] gi|145689439|gb|ABP89945.1| C-5 cytosine-specific DNA methylase [Streptococcus suis 05ZYH33] gi|145691646|gb|ABP92151.1| C-5 cytosine-specific DNA methylase [Streptococcus suis 98HAH33] gi|251816044|emb|CAZ51664.1| C-5 cytosine-specific DNA methylase [Streptococcus suis SC84] gi|251818004|emb|CAZ55786.1| C-5 cytosine-specific DNA methylase [Streptococcus suis BM407] Length = 451 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 3/83 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF VPQ RER++II F FP P + L K ++ ++ Sbjct: 148 LNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLRRENSPAHLERLGNINPSKRGLNGEV-- 205 Query: 60 GHQKRKENNKIAGKGFGYGLFFE 82 GKG G + Sbjct: 206 YLTNGLAPTLTRGKGEGAKIAIP 228 >gi|319412045|emb|CBY91978.1| C-5-cytosine-specific DNA methylase [Streptococcus pneumoniae] Length = 452 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 4/83 (4%) Query: 1 MKACDFGVPQRRERLYIID-FLNPSVEFKFPTPLGIKPRLGDILE---EHIDDKSTISNK 56 + + DFGVPQ RER++II F FP + + L+ KS +S K Sbjct: 148 LNSKDFGVPQNRERVFIIGHFRKKGTRLLFPFTREGQATHSETLKTLGNLNPSKSGMSGK 207 Query: 57 LWEGHQKRKENNKIAGKGFGYGL 79 ++ + G+GF + Sbjct: 208 VYYSEGLAPTLVRGKGEGFKVAI 230 >gi|294651999|ref|ZP_06729281.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter haemolyticus ATCC 19194] gi|292822115|gb|EFF81036.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter haemolyticus ATCC 19194] Length = 336 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 6/99 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+G+ Q R+R+ + F +V + FP P+ K L DI+++ D NK Sbjct: 145 LNATDYGIAQDRKRVIFLGFRKDLNVHYTFPEPIVKKLVLKDIIKDLEDKAVPAINKSKP 204 Query: 60 GHQKRKENNKIAGKGFGYGLFFEN-----SATTNTLSAR 93 N++ GF N + T+ A Sbjct: 205 NPLAIVPNHEYMTGGFSSMYMSRNRVRSWDEPSFTIQAG 243 >gi|158335733|ref|YP_001516905.1| DNA-cytosine methyltransferase [Acaryochloris marina MBIC11017] gi|158305974|gb|ABW27591.1| DNA-cytosine methyltransferase [Acaryochloris marina MBIC11017] Length = 397 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 6/90 (6%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 A ++GVPQRRER++I+ ++E+ FP +L + Sbjct: 175 DAANYGVPQRRERVFIVGIREDLNIEWSFPEESHSLDS---LLWSQFITGAYWIRNAVNP 231 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTL 90 + E+ + L + S + +L Sbjct: 232 LEI--EHLDQRTQQRAKQLMQQPSLFSPSL 259 >gi|119512301|ref|ZP_01631388.1| DNA modification methylase [Nodularia spumigena CCY9414] gi|119463081|gb|EAW44031.1| DNA modification methylase [Nodularia spumigena CCY9414] Length = 502 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDILEEHIDDK 50 + + D+GVPQ R R+YII F +F P K +LGDIL + K Sbjct: 147 INSFDYGVPQNRIRVYIIGFHKQEYLEKFALPKQTDKKRKLGDILGITSEQK 198 >gi|327474139|gb|EGF19549.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus sanguinis SK408] Length = 480 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 4/83 (4%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILE---EHIDDKSTISNK 56 + + DFGVPQ RER++II S FP + +IL+ KS +S K Sbjct: 176 LNSKDFGVPQNRERVFIIGHSRKKSTRLLFPFRREGQATNSEILKTLGNLNPSKSGMSGK 235 Query: 57 LWEGHQKRKENNKIAGKGFGYGL 79 ++ + G+GF + Sbjct: 236 VYYSEGLAPTLVRGKGEGFKIAI 258 >gi|223932228|ref|ZP_03624232.1| DNA-cytosine methyltransferase [Streptococcus suis 89/1591] gi|223899209|gb|EEF65566.1| DNA-cytosine methyltransferase [Streptococcus suis 89/1591] Length = 451 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 29/83 (34%), Gaps = 3/83 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF VPQ RER++II F FP P + L K ++ ++ Sbjct: 148 LNSKDFQVPQNRERVFIIGHSRRYRSRFIFPLRRENSPAHLERLGNINPSKRGLNGEV-- 205 Query: 60 GHQKRKENNKIAGKGFGYGLFFE 82 G G G + Sbjct: 206 YLTSGLAPTLTRGNGEGAKIAIP 228 >gi|332704951|ref|ZP_08425037.1| DNA-methyltransferase (dcm) [Lyngbya majuscula 3L] gi|332356303|gb|EGJ35757.1| DNA-methyltransferase (dcm) [Lyngbya majuscula 3L] Length = 360 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 7/98 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG------IKPRLGDILEEHIDDKSTIS 54 ++A +G+PQ RERL+ + + +F FP G L + D + + Sbjct: 150 LEAASYGIPQYRERLFFVGLATKN-DFTFPRKTHGLGTSNPYISSGSALTDVPDYEPNTT 208 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + + A G G A + T++A Sbjct: 209 KVSYANKPVIRPTPWTATLVKGGGKPINFDAPSPTITA 246 >gi|302347057|ref|YP_003815355.1| putative modification methylase HhaI [Prevotella melaninogenica ATCC 25845] gi|302150379|gb|ADK96640.1| putative modification methylase HhaI [Prevotella melaninogenica ATCC 25845] Length = 453 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 3/80 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + +FG+PQ R+R+YI+ F FP + DI+E + D + I + Sbjct: 150 LSPHEFGIPQHRKRIYIVCIRKDLGLLDNFTFPKGNKPVCDVNDIIEANAKDITPIKEET 209 Query: 58 WEGHQKRKENNKIAGKGFGY 77 +E G Sbjct: 210 HYQLNIWQEFIDKTIANGGT 229 >gi|127429|sp|P06530|MTBR_BACSU RecName: Full=Modification methylase BsuRI; Short=M.BsuRI; AltName: Full=Cytosine-specific methyltransferase BsuRI gi|40247|emb|CAA26731.1| unnamed protein product [Bacillus subtilis] Length = 436 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 4/85 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLG---IKPRLGDILEEHIDDKSTISNK 56 + A D+GVPQ RER+ I S +K+P+P + L + I D T Sbjct: 227 LNARDYGVPQLRERVIIEGVRKDISFNYKYPSPTHGEETGLKPFKTLRDSIGDLVTDPGP 286 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFF 81 + G ++ K + F Sbjct: 287 YFTGSYSSIYMSRNRKKSWDEQSFT 311 >gi|291528318|emb|CBK93904.1| DNA-methyltransferase (dcm) [Eubacterium rectale M104/1] Length = 344 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 3/51 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLGIKPRLGDILEEHID 48 + A ++GVPQ+RERL I N V E++FP KP L D+L + D Sbjct: 152 LNAWNYGVPQKRERLITIGIRNDLVGKTEYRFPKAHSYKPVLRDVLLDCPD 202 >gi|326559503|gb|EGE09926.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 7169] Length = 354 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 36/105 (34%), Gaps = 13/105 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A +GV Q R R+ I+ + K+P PL + ++ + + LWE Sbjct: 179 LNASHYGVAQNRVRVIIVGIRKDIDKKMKYPKPLFGELSDS---QKPVITSKQAIDDLWE 235 Query: 60 GH----QKRKENNKIAGKGFGYGLFFEN-----SATTNTLSARYY 95 +N+ K + N T+ A ++ Sbjct: 236 LLDDNINSHSKNHYSKAKFYPNKKLQGNCQINADKPAPTIRAEHH 280 >gi|306821027|ref|ZP_07454646.1| possible DNA (cytosine-5-)-methyltransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550968|gb|EFM38940.1| possible DNA (cytosine-5-)-methyltransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 317 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 7/92 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++++ L + F F I + + LE+ + + + K Sbjct: 156 LNAMDFGIPQKRERIFVVSILGKN-NFDFEKLEKIPTKHISEFLEKEVSEIYEVRQKSI- 213 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + N K + T+S Sbjct: 214 -LSNIQGNIKNINYKGRLKII---DKYVYTIS 241 >gi|207093118|ref|ZP_03240905.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori HPKX_438_AG0C1] Length = 199 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+GVPQ RER +I+ S +F P Sbjct: 32 LNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQS 66 >gi|182437151|ref|YP_001824870.1| putative SacI methylase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178465667|dbj|BAG20187.1| putative SacI methylase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 363 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 29/81 (35%), Gaps = 1/81 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFGVPQ R RL++I + P P T S L EG Sbjct: 174 LNAADFGVPQARPRLFLIGVPKGKKVPQHPDPTHGGKWERRATGTTEQPHVTTSQAL-EG 232 Query: 61 HQKRKENNKIAGKGFGYGLFF 81 E ++ +G+ L Sbjct: 233 LMAEPEPGEVVAGKYGHLLPD 253 >gi|208289|gb|AAA72678.1| Mtase protein (ttg start codon) [synthetic construct] Length = 474 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 30/91 (32%) Query: 1 MKACDFGVPQRRERLYIIDFLNP------------------------------SVEFKFP 30 + + F VPQ RER+YII S FK+P Sbjct: 182 LNSKFFNVPQNRERVYIIGIREDLVENEQWVVGQKRNDVLSKGKKRLQEINIKSFNFKWP 241 Query: 31 TPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 + RL +ILE+ +D+K ++ + + Sbjct: 242 LQDTVTKRLREILEDFVDEKYYLNEEKTKKL 272 >gi|218135211|ref|ZP_03464015.1| hypothetical protein BACPEC_03116 [Bacteroides pectinophilus ATCC 43243] gi|217990596|gb|EEC56607.1| hypothetical protein BACPEC_03116 [Bacteroides pectinophilus ATCC 43243] Length = 344 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 3/51 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLGIKPRLGDILEEHID 48 + A ++GVPQ+RERL I N V E++FP KP L D+L + D Sbjct: 152 LNAWNYGVPQKRERLITIGIRNDLVGKTEYRFPKAHSYKPVLRDVLLDCPD 202 >gi|15612115|ref|NP_223767.1| type II DNA modification (methyltransferase [Helicobacter pylori J99] gi|4155654|gb|AAD06642.1| TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE) [Helicobacter pylori J99] Length = 321 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 4/90 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q+RERLYI+ F F FP L D L+ D + Sbjct: 145 LNSADFQLAQKRERLYIVGFRKDLKRPFNFPLGLANDYCFKDFLDA---DNECYLDVSNA 201 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 Q+ N + F + +A +T Sbjct: 202 TFQRYLRNPYNHNRVFLEDILTLENAVLDT 231 >gi|326567273|gb|EGE17393.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 12P80B1] gi|326568220|gb|EGE18302.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC8] Length = 354 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 36/105 (34%), Gaps = 13/105 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A +GV Q R R+ I+ + K+P PL + ++ + + LWE Sbjct: 179 LNASHYGVAQNRVRVIIVGIRKDIDKKMKYPKPLFGELSDS---QKPVITSKQAIDDLWE 235 Query: 60 GH----QKRKENNKIAGKGFGYGLFFEN-----SATTNTLSARYY 95 +N+ K + N T+ A ++ Sbjct: 236 LLDDNINSHSKNHYSKAKFYPNKKLQGNCQINADKPAPTIRAEHH 280 >gi|332162719|ref|YP_004299296.1| Cytosine-specific methyltransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325666949|gb|ADZ43593.1| Cytosine-specific methyltransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859459|emb|CBX69803.1| hypothetical protein YEW_FM23370 [Yersinia enterocolitica W22703] Length = 365 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 5/91 (5%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 + +FGVPQ RER++I+ L+ + FK P+ I + +D KL E Sbjct: 213 NSANFGVPQTRERVFIVGTLHGNPLFK--EPVDILHKNE---WLTCNDAIHDLEKLDEDR 267 Query: 62 QKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 +K + T+ A Sbjct: 268 TFNHIWSKAKKSPDQGSRRLTKDKPSQTIRA 298 >gi|328471744|gb|EGF42621.1| putative C-5 cytosine-specific DNA methylase [Vibrio parahaemolyticus 10329] Length = 392 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 33/97 (34%), Gaps = 10/97 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A D+GVPQ R+R +I+ + + FP P T ++ ++ Sbjct: 160 LNAKDYGVPQNRKRAFILGIRDDVKIDKLVFP-PKKTHFSPSSQEVAGGASSWTPASSVF 218 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYY 95 E + Y ++ ARYY Sbjct: 219 EPITSDIIERFVTDHFRPYTKLSDDD-------ARYY 248 >gi|22537444|ref|NP_688295.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae 2603V/R] gi|76797962|ref|ZP_00780222.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae 18RS21] gi|77406085|ref|ZP_00783160.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae H36B] gi|313890485|ref|ZP_07824113.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pseudoporcinus SPIN 20026] gi|22534321|gb|AAN00168.1|AE014251_12 C-5 cytosine-specific DNA methylase [Streptococcus agalactiae 2603V/R] gi|76586686|gb|EAO63184.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae 18RS21] gi|77175318|gb|EAO78112.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae H36B] gi|313121002|gb|EFR44113.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pseudoporcinus SPIN 20026] gi|323127117|gb|ADX24414.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 451 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 3/83 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF VPQ RER++II F FP P + L K ++ ++ Sbjct: 148 LNSKDFQVPQNRERVFIIGHSRRYRSRFIFPLRREDSPAHLERLGNINPSKHGLNGEV-- 205 Query: 60 GHQKRKENNKIAGKGFGYGLFFE 82 GKG G + Sbjct: 206 YLTSGLAPTLTRGKGEGAKIAIP 228 >gi|212639806|ref|YP_002316326.1| Site-specific DNA methylase [Anoxybacillus flavithermus WK1] gi|212561286|gb|ACJ34341.1| Site-specific DNA methylase [Anoxybacillus flavithermus WK1] Length = 469 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 7/55 (12%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLG------IKPRLGDILEEHID 48 +KA D+GVPQ RER+++I + F++P P +GD L + + Sbjct: 212 LKASDYGVPQHRERIFLIGINRDYDATFRYPLPTHGPDRTFPYVTVGDALFDLPE 266 >gi|169834211|ref|YP_001693507.1| hypothetical protein SPH_0083 [Streptococcus pneumoniae Hungary19A-6] gi|168996713|gb|ACA37325.1| hypothetical protein SPH_0083 [Streptococcus pneumoniae Hungary19A-6] Length = 255 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 36/97 (37%), Gaps = 17/97 (17%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DFGVPQ RER++II FP +G R D K + K Sbjct: 147 LNSKDFGVPQNRERVFIIGHSRKRGTRRVFP--IGRANREFDF---EPKIKIVGNTKNPN 201 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 G + ++++ TL AR YK Sbjct: 202 G-----------TSQGTGSVVYDSNGLVGTLCARDYK 227 >gi|9630267|ref|NP_046694.1| modification methylase [Bacillus phage SPBc2] gi|16079084|ref|NP_389907.1| SP-beta prophage DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp. subtilis str. 168] gi|221309931|ref|ZP_03591778.1| modification methylase Bsu [Bacillus subtilis subsp. subtilis str. 168] gi|221314254|ref|ZP_03596059.1| modification methylase Bsu [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319176|ref|ZP_03600470.1| modification methylase Bsu [Bacillus subtilis subsp. subtilis str. JH642] gi|221323451|ref|ZP_03604745.1| modification methylase Bsu [Bacillus subtilis subsp. subtilis str. SMY] gi|56405062|sp|P68585|MTBP_BACSU RecName: Full=Phi-3T prophage-derived modification methylase Phi3TI; Short=M.Phi3TI; AltName: Full=Cytosine-specific methyltransferase Phi3TI gi|56405063|sp|P68586|MTBP_BPPHT RecName: Full=Modification methylase Phi3TI; Short=M.Phi3TI; AltName: Full=Cytosine-specific methyltransferase Phi3TI gi|7433506|pir||T12906 modification methylase - Bacillus subtilis phage SPBc2 gi|215471|gb|AAA32352.1| methyltransferase (ttg start codon) [Bacillus phage phi3T] gi|2634418|emb|CAB13917.1| putative SP-beta prophage DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp. subtilis str. 168] gi|3025620|gb|AAC13115.1| modification methylase [Bacillus phage SPbeta] Length = 443 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 30/91 (32%) Query: 1 MKACDFGVPQRRERLYIIDFLNP------------------------------SVEFKFP 30 + + F VPQ RER+YII S FK+P Sbjct: 182 LNSKFFNVPQNRERVYIIGIREDLVENEQWVVGQKRNDVLSKGKKRLQEINIKSFNFKWP 241 Query: 31 TPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 + RL +ILE+ +D+K ++ + + Sbjct: 242 LQDTVTKRLREILEDFVDEKYYLNEEKTKKL 272 >gi|220903552|ref|YP_002478864.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867851|gb|ACL48186.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 310 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 32/100 (32%), Gaps = 9/100 (9%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLGIK-PRLGDILEEHIDDKSTISNKL 57 DFGVPQ R R+ I ++++P + P G + I + + Sbjct: 143 NVADFGVPQSRFRVIIAGTRKDIPKRLDYEYPAATHAQAPSQGKLPWVTIGEALKEIPEP 202 Query: 58 WEGHQ----KRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 +G + G+ + T+ AR Sbjct: 203 GDGVALLNHDYSKYKITNRNFTGHRKTDPG-KPSPTILAR 241 >gi|319639604|ref|ZP_07994351.1| cytosine-specific methyltransferase [Neisseria mucosa C102] gi|317399175|gb|EFV79849.1| cytosine-specific methyltransferase [Neisseria mucosa C102] Length = 348 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 4/89 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPL-GIKPRLGDILEEHIDDKSTISNKL-W 58 + A D+GVPQ R+R + + F N ++ F+FP + + + D Sbjct: 155 LMASDYGVPQNRKRAFFVGFKNGTI-FEFPKQTVNQYVTVKQAISDLPDYSVDDGAAYPL 213 Query: 59 EGHQKRKENNKIAGKG-FGYGLFFENSAT 86 G + + + G F + + N T Sbjct: 214 LGSSEYQHMMRQNSTGLFNHQITQHNDKT 242 >gi|288559285|ref|YP_003422771.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1] gi|288541995|gb|ADC45879.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1] Length = 342 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A + GVPQ+R+R+ I VEF P P K + + L D ++ Sbjct: 152 LDASEHGVPQKRKRVIFIGSRIGDVEF--PKPKDKKVSVMEALGNIPDTNFEYYDEPTNS 209 Query: 61 HQKRKENNKIAGKGF 75 Q+ + + Sbjct: 210 FQELMADGEKKIYNH 224 >gi|238793797|ref|ZP_04637418.1| Cytosine-specific methyltransferase [Yersinia intermedia ATCC 29909] gi|238726861|gb|EEQ18394.1| Cytosine-specific methyltransferase [Yersinia intermedia ATCC 29909] Length = 365 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 5/91 (5%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 + +FGVPQ RER++I+ L+ + FK P+ I + +D KL E Sbjct: 213 NSANFGVPQTRERVFIVGTLHGNPLFK--EPVDILHKNE---WLTCNDAIHDLEKLDEDR 267 Query: 62 QKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 +K + T+ A Sbjct: 268 TFNHIWSKAKKSPDQGSRRLTKDKPSQTIRA 298 >gi|319744643|gb|EFV96990.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus agalactiae ATCC 13813] Length = 451 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 3/83 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF VPQ RER++II F FP P + L K ++ ++ Sbjct: 148 LNSKDFQVPQNRERVFIIGHSRRYRSRFIFPLRRENSPAHLERLGNINPSKRGLNGEV-- 205 Query: 60 GHQKRKENNKIAGKGFGYGLFFE 82 GKG G + Sbjct: 206 YLTSGLAPTLTRGKGEGAKIAIP 228 >gi|210621902|ref|ZP_03292899.1| hypothetical protein CLOHIR_00844 [Clostridium hiranonis DSM 13275] gi|210154533|gb|EEA85539.1| hypothetical protein CLOHIR_00844 [Clostridium hiranonis DSM 13275] Length = 438 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 19/33 (57%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPL 33 + A D+GVPQRR R+ I + + ++P P Sbjct: 181 LNAADYGVPQRRNRIIFIGYKKGLKQPQYPEPT 213 >gi|113474395|ref|YP_720456.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] gi|110165443|gb|ABG49983.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] Length = 421 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 6/93 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFP-----TPLGIKPRLGDILEEHIDDKSTISN 55 + A ++GVPQ RERL+I+ +P + D + + + ++ Sbjct: 155 LNAANYGVPQHRERLFILGCKKGLKLPNYPQIQIHKKSEAYINVWDAIGDLPEVENYPEL 214 Query: 56 KLWEGHQKRKENNKIAGKGFG-YGLFFENSATT 87 + + + +K + G+ + N+ + Sbjct: 215 LEIDWVKAENDYDKPSEYAKKLRGIEYFNNDYS 247 >gi|331085742|ref|ZP_08334825.1| hypothetical protein HMPREF0987_01128 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406665|gb|EGG86170.1| hypothetical protein HMPREF0987_01128 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 425 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 4/98 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGD-ILEEHIDDKSTISNKLWE 59 + + D+GVPQ RER++II L + + G + I+ + S + Sbjct: 151 LNSKDYGVPQNRERVFIIANLRSRGRREILSLRGKNKAALNQIIGGMQGYRVYDSQGVST 210 Query: 60 GHQKRKENNKIAGKGFG--YGLFFEN-SATTNTLSARY 94 + + T L+ARY Sbjct: 211 TLIGNAGGMGAKTGLYFIDQSKVAPKITDTARCLTARY 248 >gi|269978372|gb|ACZ55920.1| putative type I restriction-modification system specificity subunit S [Helicobacter pylori] Length = 263 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 13/98 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG------------IKPRLGDILEEHID 48 +KA D+GVPQ RER+ II FP + D++ + Sbjct: 152 LKASDYGVPQHRERVIIIGNRLGLKN-PFPKKTHGLCNDLFNEKLKPYVCVKDVVGHLAN 210 Query: 49 DKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSAT 86 ++ ++ + +G + +G + Sbjct: 211 IRTRDASFMLDGVMIHNHVARTNVYDTFWGRKHPINQH 248 >gi|252957|gb|AAA09969.1| methyltransferase [Herpetosiphon aurantiacus] Length = 437 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + + D+GV Q R+R++II +F FP + RL DIL+ + Sbjct: 146 LNSFDYGVAQNRDRVFIIGIQQKLGVPDFSFPEYSESEQRLYDILDNLQTPSIIPES 202 >gi|323178455|gb|EFZ64033.1| modification methylase NgoMIV [Escherichia coli 1180] Length = 377 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 22/98 (22%) Query: 2 KACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 A D+GVPQ R R+ ++ S F++P+ I P +GD L + +S WEG Sbjct: 154 NASDYGVPQLRPRVLLVALRGKYSAHFRWPSETLIPPTVGDALFDL------MSQGGWEG 207 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 + ++ + TL +K G Sbjct: 208 AEAWRKAA---------------NNIAPTLVGGSHKHG 230 >gi|260866454|ref|YP_003232856.1| putative DNA modification methylase [Escherichia coli O111:H- str. 11128] gi|257762810|dbj|BAI34305.1| predicted DNA modification methylase [Escherichia coli O111:H- str. 11128] Length = 356 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 22/98 (22%) Query: 2 KACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 A D+GVPQ R R+ ++ S F++P+ I P +GD L + +S WEG Sbjct: 154 NASDYGVPQLRPRVLLVALRGKYSAHFRWPSETLIPPTVGDALFDL------MSQGGWEG 207 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 + ++ + TL +K G Sbjct: 208 AEAWRKAA---------------NNIAPTLVGGSHKHG 230 >gi|149373126|ref|ZP_01892014.1| DcmB [unidentified eubacterium SCB49] gi|149354274|gb|EDM42843.1| DcmB [unidentified eubacterium SCB49] Length = 349 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHID 48 + A D+ VPQ R+R++ I + +++FPT K L D++ + + Sbjct: 145 LNASDYNVPQDRKRVFFIGIRKDLNFKYQFPTETFPKIPLEDVISDLQE 193 >gi|52788777|gb|AAU87368.1| MnlI m5C-methyltransferase [Moraxella nonliquefaciens] Length = 351 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 18/28 (64%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK 28 + A D+GVPQ RER++II N +F Sbjct: 150 LNAKDYGVPQSRERIFIIATKNQPFDFD 177 >gi|23428398|gb|AAL15430.1| DNA methyltransferase A [Moraxella nonliquefaciens] Length = 351 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 18/28 (64%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK 28 + A D+GVPQ RER++II N +F Sbjct: 150 LNAKDYGVPQSRERIFIIATKNQPFDFD 177 >gi|152994008|ref|YP_001359729.1| cytosine-specific methyltransferase [Sulfurovum sp. NBC37-1] gi|151425869|dbj|BAF73372.1| cytosine-specific methyltransferase [Sulfurovum sp. NBC37-1] Length = 362 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 3/87 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKP-RLGDILEEHIDDKSTISNKL 57 + A DFGVPQ R R +II ++F F + +G+ L++ K+ K Sbjct: 150 LNAADFGVPQYRNRFFIIGHRKEKGGIKFDFDSLEKKPKVTVGEALKDLPSLKNGDKIKE 209 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENS 84 + ++ + + +N Sbjct: 210 AAYKRVKQVHPYVKLIRRTSKKALQNH 236 >gi|317506927|ref|ZP_07964699.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC BAA-974] gi|316254855|gb|EFV14153.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC BAA-974] Length = 399 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 A D+GVPQRR R++I+ F + + FP P G+ L + Sbjct: 182 DAADYGVPQRRHRVFIVGFRSDVRAGWAFPAPTHS----GEALRRAQAEGDYFDRH 233 >gi|257464589|ref|ZP_05628960.1| putative 5-methylcytosine methyltransferase [Actinobacillus minor 202] gi|257450249|gb|EEV24292.1| putative 5-methylcytosine methyltransferase [Actinobacillus minor 202] Length = 331 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 29/87 (33%), Gaps = 2/87 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHIDDKSTISNKLWE 59 + A DFGVPQ R R+ I + FP P +G+ + S ++ + Sbjct: 153 LNAADFGVPQLRSRIVFIG-RKDKGKILFPEPSHREYKTVGEAIGHFPPLNSGENSLIVN 211 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSAT 86 R + + F N Sbjct: 212 HEAMRHSDQMLEKMSFVKNGGNRNDIP 238 >gi|312874669|ref|ZP_07734692.1| modification methylase HaeIII [Lactobacillus iners LEAF 2053A-b] gi|311089796|gb|EFQ48217.1| modification methylase HaeIII [Lactobacillus iners LEAF 2053A-b] Length = 331 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKF-PTPLGIKPRLGDILEEHIDDKSTISNK 56 + A D+GVPQ R+R++ + F ++ F P P K D + + D+ K Sbjct: 142 LNASDYGVPQDRKRVFYVGFRKDLNINFDIPPKPYDYKLIFRDAIYDLKDNAIPALEK 199 >gi|308182632|ref|YP_003926759.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori PeCan4] gi|308064817|gb|ADO06709.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori PeCan4] Length = 351 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ RER+ ++ L +F F P+ L D L + +S + Sbjct: 145 LNALDYGVPQIRERVILVGALKSFKQKFHFHKPIKTHFSLKDALGDLPPIQSGENGDALG 204 Query: 60 GHQK 63 + Sbjct: 205 YLKN 208 >gi|127435|sp|P25264|MTC2_HERAU RecName: Full=Modification methylase HgiCII; Short=M.HgiCII; AltName: Full=Cytosine-specific methyltransferase HgiCII gi|43464|emb|CAA38935.1| methyltransferase [Herpetosiphon aurantiacus] Length = 437 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + + D+GV Q R+R++II +F FP + RL DIL+ + Sbjct: 146 LNSFDYGVAQNRDRVFIIGIQQKLGVPDFSFPEYSESEQRLYDILDNLQTPSIIPES 202 >gi|328553026|gb|AEB23518.1| SP-beta prophage DNA (cytosine-5-)-methyltransferase [Bacillus amyloliquefaciens TA208] Length = 503 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 40/109 (36%), Gaps = 30/109 (27%) Query: 1 MKACDFGVPQRRERLYIIDFLNP------------------------------SVEFKFP 30 + + F VPQ RER+YII S FK+ Sbjct: 149 LNSKFFNVPQNRERIYIIGVREDLIENDEWIVEKGRNDVLSKGKKRLKELNIKSFNFKWS 208 Query: 31 TPLGIKPRLGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGL 79 + RL +ILEE++D+K +S + ++ E K F G+ Sbjct: 209 AQDIVGKRLREILEEYVDEKYYLSEEKTSKLIEQIEKPKEKDVVFVGGI 257 >gi|326566077|gb|EGE16234.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC1] Length = 354 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 13/105 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW- 58 + A +GV Q R R+ I+ + K+P PL + ++ + + LW Sbjct: 179 LNASHYGVAQNRVRVIIVGIRKDIDKKMKYPKPLFGELSDS---KKPVITSKQAIDDLWG 235 Query: 59 ---EGHQKRKENNKIAGKGFGYGLFFEN-----SATTNTLSARYY 95 + +N+ K + N T+ A ++ Sbjct: 236 LLDDNINSHSKNHYSKAKFYPNKKLQGNCQINADKPAPTIRAEHH 280 >gi|325294602|ref|YP_004281116.1| DNA-cytosine methyltransferase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065050|gb|ADY73057.1| DNA-cytosine methyltransferase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 342 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 8/100 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHID------DKSTI 53 + D+ VPQ R+R++II F + + FP P K L D + + D +K+ Sbjct: 143 IDTYDYLVPQNRKRVFIIGFRKDLQISYSFPKPFDRKKTLRDAIYDLKDNVVEPLEKNRH 202 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + K+ + + + + + + T+ A Sbjct: 203 NPKVIVPNHEYYIGSFSSIY-MSRNRVRSWNEPSFTIQAS 241 >gi|157961098|ref|YP_001501132.1| DNA-cytosine methyltransferase [Shewanella pealeana ATCC 700345] gi|157846098|gb|ABV86597.1| DNA-cytosine methyltransferase [Shewanella pealeana ATCC 700345] Length = 406 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 A +GVPQ RER++I+ + FK P+P + + Sbjct: 162 NASSYGVPQHRERVFIVANRDG-GTFKMPSPTHSDSKDPTL 201 >gi|1399076|gb|AAB03209.1| NgoII cytosine methylase M.NgoII [Neisseria gonorrhoeae] Length = 341 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 11/86 (12%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPT----PLGIKPRLGDILEEHIDDKSTISNK 56 A D+GV Q R+R++ I F ++F FP K L D++ + D + Sbjct: 156 NAKDYGVAQERKRVFYIGFRKDLEIKFSFPKGSTVEDKDKITLKDVIWDLQDTAVPSAP- 214 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFE 82 Q + + + + + G F Sbjct: 215 -----QNKTKPDAVNNNEYFTGSFSP 235 >gi|121582558|ref|YP_974087.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42] gi|120608614|gb|ABM44352.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42] Length = 318 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 2/59 (3%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV-EFKFPTP-LGIKPRLGDILEEHIDDKSTISNKLW 58 A D+GV Q R R+ + F +P P P +G++L + + W Sbjct: 146 NASDYGVSQLRPRVVFVGIRKDLASGFSWPEPLPNNPPTVGELLHDLMAANGWRGADRW 204 >gi|254450593|ref|ZP_05064030.1| modification methylase FnuDI [Octadecabacter antarcticus 238] gi|198264999|gb|EDY89269.1| modification methylase FnuDI [Octadecabacter antarcticus 238] Length = 365 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 10/101 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLG---IKPRLGDILEEHIDDKSTISNK 56 + + D+GVPQRR+RL++I F FPT + +L + Sbjct: 144 INSQDYGVPQRRKRLFVIGVRRDLGGYFHFPTETHCKLEDVKKTGLLPHTSHGEVIKHLP 203 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFEN-----SATTNTLSA 92 W + + + G F + N + + T+ A Sbjct: 204 KWPSGEFYERPHDPEG-HFSWYYMSRNRKAEWNRPSYTVVA 243 >gi|332366902|gb|EGJ44643.1| modification methylase BepI [Streptococcus sanguinis SK1059] Length = 197 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 40/102 (39%), Gaps = 9/102 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLN---PSVEFKFPTPLG--IKPRLGDILEEHID--DKSTI 53 + A D+GVPQ R R+ I+ N + + +P P D LE+ + + + I Sbjct: 16 LDAADYGVPQSRRRVIIVGIRNDIGDNEKIYYPEPTHVGNPRTAFDALEDIWELFNTNQI 75 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYY 95 +N K + + +A +T+ A ++ Sbjct: 76 ANHNRNSVSHAKFYGDDIKRQGNNQI--PKNAPASTIRAEHH 115 >gi|188533112|ref|YP_001906909.1| C-5 cytosine-specific DNA methylase family protein [Erwinia tasmaniensis Et1/99] gi|188028154|emb|CAO96012.1| C-5 cytosine-specific DNA methylase family protein [Erwinia tasmaniensis Et1/99] Length = 395 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 27/90 (30%), Gaps = 2/90 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A D+GVPQ R R++I+ + E +P + + + Sbjct: 167 LNAKDYGVPQNRNRVFILGLRDDISISEGDWPPLPTHFKDKKPYWVNASEVFEKPTPSII 226 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTN 88 E + F L S N Sbjct: 227 EKITAILGQDVAQKLKFKNTLKENKSDQNN 256 >gi|328912201|gb|AEB63797.1| Modification methylase Rho11sI [Bacillus amyloliquefaciens LL3] Length = 503 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 40/109 (36%), Gaps = 30/109 (27%) Query: 1 MKACDFGVPQRRERLYIIDFLNP------------------------------SVEFKFP 30 + + F VPQ RER+YII S FK+ Sbjct: 149 LNSKFFNVPQNRERIYIIGVREDLIENDEWVLEKGRNDVLSKGKKRLKELNIKSFNFKWS 208 Query: 31 TPLGIKPRLGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGL 79 + RL +ILEE++D+K +S + ++ E K F G+ Sbjct: 209 AQDIVGQRLREILEEYVDEKYYLSEEKTSKLIEQIEKPKEKDVVFVGGI 257 >gi|310815203|ref|YP_003963167.1| modification methylase XorII [Ketogulonicigenium vulgare Y25] gi|308753938|gb|ADO41867.1| modification methylase XorII [Ketogulonicigenium vulgare Y25] Length = 437 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 27/65 (41%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+GVPQ R+RL ++ +P + +P D L + + + + + Sbjct: 155 LNAADYGVPQDRQRLILMGAKKGRSLPDYPKAIAERPTCQDALADLPNAEEFERLRNSDS 214 Query: 61 HQKRK 65 + Sbjct: 215 IKTAA 219 >gi|154508844|ref|ZP_02044486.1| hypothetical protein ACTODO_01354 [Actinomyces odontolyticus ATCC 17982] gi|153798478|gb|EDN80898.1| hypothetical protein ACTODO_01354 [Actinomyces odontolyticus ATCC 17982] Length = 355 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 35/101 (34%), Gaps = 8/101 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEF--KFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A D+GVPQ R R++ + + + + + I GD L + +N Sbjct: 157 LNAADYGVPQLRRRMFFVGMIGMHASYAERLKEMVMIPIACGDALRKMPKFGQVGNNDCG 216 Query: 59 EGHQKRKENNKIAGKGF------GYGLFFENSATTNTLSAR 93 +N + + G+G S T+ A Sbjct: 217 NAQIVPAKNPVLRKSPYSGMLFNGHGRVINLSEPAPTIVAS 257 >gi|118577457|ref|YP_899696.1| DNA-cytosine methyltransferase [Pelobacter propionicus DSM 2379] gi|118504962|gb|ABL01443.1| DNA-cytosine methyltransferase [Pelobacter propionicus DSM 2379] Length = 313 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 18/30 (60%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTP 32 A D+GVPQ RER++I+ +F P P Sbjct: 162 AADYGVPQTRERVFIVGTRPDVQKFIPPKP 191 >gi|319897026|ref|YP_004135221.1| modification methylase haeiii [Haemophilus influenzae F3031] gi|317432530|emb|CBY80890.1| Modification methylase HaeIII [Haemophilus influenzae F3031] Length = 330 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 16/87 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GV Q R+R++ I F ++ + P P IKP D++ + Sbjct: 142 LNANDYGVAQDRKRVFYIGFRKELNINYLPPIPHLIKPTFKDVIWD-------------- 187 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSAT 86 + K G + N Sbjct: 188 -LKDNPIPALDKNKTNGNKCIYPNHEY 213 >gi|319776343|ref|YP_004138831.1| Modification methylase HaeIII [Haemophilus influenzae F3047] gi|127460|sp|P20589|MTH3_HAEAE RecName: Full=Modification methylase HaeIII; Short=M.HaeIII; AltName: Full=Cytosine-specific methyltransferase HaeIII gi|148915|gb|AAA24970.1| methyltransferase [Haemophilus aegyptius] gi|2961233|gb|AAC05696.1| HaeIII DNA modification methyltransferase [Haemophilus influenzae biotype aegyptius] gi|317450934|emb|CBY87160.1| Modification methylase HaeIII [Haemophilus influenzae F3047] Length = 330 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 16/87 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GV Q R+R++ I F ++ + P P IKP D++ + Sbjct: 142 LNANDYGVAQDRKRVFYIGFRKELNINYLPPIPHLIKPTFKDVIWD-------------- 187 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSAT 86 + K G + N Sbjct: 188 -LKDNPIPALDKNKTNGNKCIYPNHEY 213 >gi|901818|gb|AAA69959.1| 5C-DNA methyltransferase [Bacillus phage H2] Length = 503 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 39/109 (35%), Gaps = 30/109 (27%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS------------------------------VEFKFP 30 + + F VPQ RER+YII FK+ Sbjct: 149 LNSKFFNVPQNRERIYIIGVREDLIENDEWIVEKGRYDVLSKGKKRLKELNIKSFNFKWS 208 Query: 31 TPLGIKPRLGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGL 79 + RL +ILEE++D+K +S + ++ E K F G+ Sbjct: 209 AQDIVGKRLREILEEYVDEKYYLSEEKTSKLIEQIEKPKEKDVVFVGGI 257 >gi|239625877|ref|ZP_04668908.1| methyltransferase [Clostridiales bacterium 1_7_47_FAA] gi|239520107|gb|EEQ59973.1| methyltransferase [Clostridiales bacterium 1_7_47FAA] Length = 338 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 15/106 (14%) Query: 2 KACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLGIK-PRLGDILEEHIDDKSTISNKLWE 59 + + VPQ R+R ++ ++ F FP P+L D LE+ + +K + ++ + Sbjct: 182 NSKYWNVPQNRDRYAVVGTRNKKNLTFTFPKEQHEFVPKLSDYLEKDVPEKYYLPDEKAQ 241 Query: 60 GHQ-------------KRKENNKIAGKGFGYGLFFENSATTNTLSA 92 K TL+A Sbjct: 242 TIIAQALEKLEGLGKCHACITPDRINKRQNGPRAKAEDEPMFTLTA 287 >gi|223933016|ref|ZP_03625010.1| DNA-cytosine methyltransferase [Streptococcus suis 89/1591] gi|223898333|gb|EEF64700.1| DNA-cytosine methyltransferase [Streptococcus suis 89/1591] Length = 451 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 3/83 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF VPQ RER++II F FP P + L K ++ ++ Sbjct: 148 LNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLRGENSPAHLERLGNINPSKRGLNGEV-- 205 Query: 60 GHQKRKENNKIAGKGFGYGLFFE 82 GKG G + Sbjct: 206 YLTSGLAPTLTRGKGEGAKIAIP 228 >gi|225858823|ref|YP_002740333.1| methyl transferase [Streptococcus pneumoniae 70585] gi|225720620|gb|ACO16474.1| methyl transferase [Streptococcus pneumoniae 70585] Length = 451 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 3/83 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF VPQ RER++II F FP P + L K ++ ++ Sbjct: 148 LNSKDFQVPQNRERVFIIGHSRRYRSRFLFPLRRENSPAHLERLGNINPSKRGLNGEV-- 205 Query: 60 GHQKRKENNKIAGKGFGYGLFFE 82 GKG G + Sbjct: 206 YLTTGLAPTLTRGKGEGAKIAIP 228 >gi|183217290|gb|ACC59209.1| methyltransferase [Streptococcus pneumoniae] gi|321156848|emb|CBW38835.1| putative DNA methylase [Streptococcus pneumoniae] Length = 452 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 4/83 (4%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFP---TPLGIKPRLGDILEEHIDDKSTISNK 56 + + DFGVPQ RER++II FP P IL KS +S K Sbjct: 148 LNSKDFGVPQNRERVFIIGHSRKRGTRLLFPFRREGQATNPETLKILGNLNPSKSGMSGK 207 Query: 57 LWEGHQKRKENNKIAGKGFGYGL 79 ++ + G+GF + Sbjct: 208 VYYSEGLAPTLVRGKGEGFKIAI 230 >gi|291525029|emb|CBK90616.1| DNA-methyltransferase (dcm) [Eubacterium rectale DSM 17629] Length = 337 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 15/106 (14%) Query: 2 KACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLGIK-PRLGDILEEHIDDKSTISNKLWE 59 + + VPQ R+R ++ ++ F FP P+L D LE+ + +K + ++ + Sbjct: 182 NSKYWNVPQNRDRYAVVGTRNKKNLTFTFPKEQHEFVPKLSDYLEKDVPEKYYLPDEKAQ 241 Query: 60 GHQ-------------KRKENNKIAGKGFGYGLFFENSATTNTLSA 92 K TL+A Sbjct: 242 TIIAQALEKLEGLGKCHACITPDRINKRQNGPRAKAEDEPMFTLTA 287 >gi|1127162|pdb|1DCT|A Chain A, Dna (Cytosine-5) Methylase From Haeiii Covalently Bound To Dna gi|1127163|pdb|1DCT|B Chain B, Dna (Cytosine-5) Methylase From Haeiii Covalently Bound To Dna Length = 324 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 16/87 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GV Q R+R++ I F ++ + P P IKP D++ + Sbjct: 142 LNANDYGVAQDRKRVFYIGFRKELNINYLPPIPHLIKPTFKDVIWD-------------- 187 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSAT 86 + K G + N Sbjct: 188 -LKDNPIPALDKNKTNGNKCIYPNHEY 213 >gi|1171045|sp|P09915|MTBR_BPRH1 RecName: Full=Modification methylase Rho11sI; Short=M.Rho11sI; AltName: Full=Bsu P11s; AltName: Full=Cytosine-specific methyltransferase Rho11sI gi|579194|emb|CAA28869.1| unnamed protein product [Bacillus phage rho11s] Length = 503 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 40/109 (36%), Gaps = 30/109 (27%) Query: 1 MKACDFGVPQRRERLYIIDFLNP------------------------------SVEFKFP 30 + + F VPQ RER+YII S FK+ Sbjct: 149 LNSKFFNVPQNRERIYIIGVREDLIENDEWVVEKGRNDVLSKGKKRLKELNIKSFNFKWS 208 Query: 31 TPLGIKPRLGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGL 79 + RL +ILEE++D+K +S + ++ E K F G+ Sbjct: 209 AQDIVGRRLREILEEYVDEKYYLSEEKTSKLIEQIEKPKEKDVVFVGGI 257 >gi|317011319|gb|ADU85066.1| type II DNA modification enzyme [Helicobacter pylori SouthAfrica7] Length = 321 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 4/90 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q+RERLYI+ F F FP L D L+ D + Sbjct: 145 LNSADFQLAQKRERLYIVGFRKDLKHSFHFPLGLANDYCFKDFLDA---DNECYLDVSNA 201 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 Q+ N + F + +A +T Sbjct: 202 TFQRYLHNPYNHNRVFLEDILTLENAVLDT 231 >gi|312386601|emb|CBY05924.1| putative DNA methylase [Streptococcus pneumoniae] Length = 452 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 4/83 (4%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGD---ILEEHIDDKSTISNK 56 + + DFGVPQ RER++II FP + + IL KS +S K Sbjct: 148 LNSKDFGVPQNRERVFIIGHSRKRGTRLLFPFRREGQATNSETLKILGNLNPSKSGMSGK 207 Query: 57 LWEGHQKRKENNKIAGKGFGYGL 79 ++ + G+GF + Sbjct: 208 VYYSEGLAPTLVRGKGEGFKVAI 230 >gi|238923038|ref|YP_002936551.1| DcmB [Eubacterium rectale ATCC 33656] gi|238874710|gb|ACR74417.1| DcmB [Eubacterium rectale ATCC 33656] Length = 672 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 12/83 (14%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 A D+GV + R+R++ I F +++F FP + D K T+ + +W+ Sbjct: 149 NAKDYGVAEERKRVFYIGFRKDLNIDFGFPKGSTKE----------DDKKITLRDIIWD- 197 Query: 61 HQKRKENNKIAGKGFGYGLFFEN 83 Q + + Sbjct: 198 LQDTAVPSGEKNHHNPEAINNNE 220 >gi|120537007|ref|YP_957065.1| C-5 cytosine-specific DNA methylase [Marinobacter aquaeolei VT8] gi|120326841|gb|ABM21150.1| C-5 cytosine-specific DNA methylase [Marinobacter aquaeolei VT8] Length = 467 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 39/102 (38%), Gaps = 8/102 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRL---GDILEEHIDDKSTIS 54 + CDFG + R+R +I + F ++ + D+LE +D + Sbjct: 276 LNGCDFGALENRDRAVVIAMSRDLAKAGMFNLADIKPLRVKEEKLADVLEPISEDDDRWT 335 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 +++ + G GF L+ + NT++ Y + Sbjct: 336 IHT--YLEEKALRDAKKGSGFQRQLYTGEESYINTVTRGYAR 375 >gi|167751358|ref|ZP_02423485.1| hypothetical protein EUBSIR_02344 [Eubacterium siraeum DSM 15702] gi|167655604|gb|EDR99733.1| hypothetical protein EUBSIR_02344 [Eubacterium siraeum DSM 15702] Length = 316 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 6/97 (6%) Query: 2 KACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 ACD+G+PQ R R YI+ F + F+FP ++ L D++++ + K Sbjct: 144 DACDYGIPQHRTRTYIVAFKSQKACDSFRFPEKCELQKHLFDVIDKTVKGKDRYYVSEGS 203 Query: 60 GHQKR---KENNKIAGKGFG-YGLFFENSATTNTLSA 92 R + F YG+ + TL A Sbjct: 204 YEHNRLSAAITDDKQIYRFSDYGIQASKDGISFTLKA 240 >gi|330891417|gb|EGH24078.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. mori str. 301020] Length = 201 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPL-GIKPRLGDILEEHID 48 + A DFGV Q R R+ + E F +P P I P +G++L + + Sbjct: 152 LNASDFGVTQLRPRVVFVGIRKDLAEGFSWPEPKLIIPPTVGELLHDLMK 201 >gi|67458529|ref|YP_246153.1| site-specific DNA methylase [Rickettsia felis URRWXCal2] gi|67004062|gb|AAY60988.1| Site-specific DNA methylase [Rickettsia felis URRWXCal2] Length = 171 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 11/103 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-----SVEFKFPTPLGIKPRLGDILEEHIDDKSTIS- 54 + A FGVPQ RER+Y + +++ P + LGDILE+ +D I+ Sbjct: 2 LNASLFGVPQARERVYFVCLRKDFSSEYILKYVKPKESYERIFLGDILEKEVDKSLYINR 61 Query: 55 -----NKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 +K Q + KG + + TLSA Sbjct: 62 DDIVLDKTPVEKQLKPIRIGQVNKGGQGERIYSPFGHSITLSA 104 >gi|4063721|gb|AAC98421.1| methyl transferase [Streptococcus pneumoniae] Length = 452 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 4/83 (4%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFP---TPLGIKPRLGDILEEHIDDKSTISNK 56 + + DFGVPQ RER++II FP P IL KS +S K Sbjct: 148 LNSKDFGVPQNRERVFIIGHSRKRGTRLGFPFRREGQATNPETLKILGNLNPSKSGMSGK 207 Query: 57 LWEGHQKRKENNKIAGKGFGYGL 79 ++ + G+GF + Sbjct: 208 VYYSEGLAPTLVRGKGEGFKIAI 230 >gi|188527903|ref|YP_001910590.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori Shi470] gi|188144143|gb|ACD48560.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori Shi470] gi|308063905|gb|ADO05792.1| type II DNA modification enzyme [Helicobacter pylori Sat464] Length = 320 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 4/90 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q+RERLYI+ F F FP L D L+ D + Sbjct: 147 LNSADFQLAQKRERLYIVGFRKDLKHPFNFPLGLANNYCFKDFLDA---DNECYLDINNA 203 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 Q+ N + F + +A +T Sbjct: 204 AFQRYLRNPYNHNRVFLENILTLENAVLDT 233 >gi|228478395|ref|ZP_04063003.1| modification methylase HaeIII [Streptococcus salivarius SK126] gi|228250074|gb|EEK09344.1| modification methylase HaeIII [Streptococcus salivarius SK126] Length = 387 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 29/101 (28%), Gaps = 11/101 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLGIK--------PRLGDILEEHIDD 49 + A DFGVPQ RER+++I E+ FP + IL + Sbjct: 169 INAKDFGVPQNRERVFLIGVRKDLKIKSEWIFPEETSLNNEITLRDAISDLPILGNNEQK 228 Query: 50 KSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTL 90 + I E + N L Sbjct: 229 YNYICEPKTEYQALLRGNQTDLLNHVSRNHGERLQKIMRAL 269 >gi|319639602|ref|ZP_07994349.1| cytosine-specific methyltransferase [Neisseria mucosa C102] gi|317399173|gb|EFV79847.1| cytosine-specific methyltransferase [Neisseria mucosa C102] Length = 327 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 38/101 (37%), Gaps = 5/101 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLW- 58 + A +FG+PQ+RER++++ + + FP + +K + + Sbjct: 157 LLAANFGIPQKRERVFMVGVRKDIQKHYTFPMETHAEQPNLYQKPFVKLEKIITTLAIDN 216 Query: 59 -EGHQKRKENNKIAG--KGFGYGLFFENSATTNTLSARYYK 96 + + K + GL+ + T++A K Sbjct: 217 PKYYFSEKAVLGMKNAKNNMKRGLYQDLQGQCLTITAHLAK 257 >gi|209809294|ref|YP_002264832.1| putative C-5 cytosine-specific DNA methylase [Aliivibrio salmonicida LFI1238] gi|208010856|emb|CAQ81257.1| putative C-5 cytosine-specific DNA methylase [Aliivibrio salmonicida LFI1238] Length = 387 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 15/102 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLG--------DILEEHIDD 49 + A DFGVPQ R+R++I +V F P P G + E + + Sbjct: 160 LNAKDFGVPQNRKRVFIHGVRKDIKSTVSFP-PEATHFSPTSGLAPCWKTASTVFEPVPE 218 Query: 50 KS---TISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTN 88 K + + + +E + + +G+ + + N Sbjct: 219 KYLNRFVKEYFLKKTKLTEEQALDSLRKLEFGIDVDKNDPCN 260 >gi|127417|sp|P25262|MTB1_HERAU RecName: Full=Modification methylase HgiBI; Short=M.HgiBI; AltName: Full=Cytosine-specific methyltransferase HgiBI gi|43478|emb|CAA38927.1| methyltransferase [Herpetosiphon aurantiacus] Length = 437 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 1 MKACDFGVPQRRERLYIIDF--LNPSVEFKFPTPLGIKPRLGDILEE 45 + + DFGV Q R+R++I+ F FP + RL IL+ Sbjct: 146 LNSFDFGVAQNRDRVFIVGIQQKLDLNGFSFPEYTESEQRLYHILDN 192 >gi|289167633|ref|YP_003445902.1| methyl transferase [Streptococcus mitis B6] gi|288907200|emb|CBJ22035.1| methyl transferase [Streptococcus mitis B6] Length = 452 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 4/83 (4%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGD---ILEEHIDDKSTISNK 56 + + DFGVPQ RER++II FP + + IL KS +S K Sbjct: 148 LNSKDFGVPQNRERVFIIGHSRKRGTRLLFPFRREGQATNSETLKILGNLNPSKSGMSGK 207 Query: 57 LWEGHQKRKENNKIAGKGFGYGL 79 ++ + G+GF + Sbjct: 208 VYYSEGLAPTLVRGKGEGFKVAI 230 >gi|308062397|gb|ADO04285.1| type II DNA modification enzyme [Helicobacter pylori Cuz20] Length = 318 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 4/90 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q+RERLYI+ F F FP L D L+ D + Sbjct: 145 LNSADFQLAQKRERLYIVGFRKDLKHPFNFPLGLANDYCFKDFLDA---DNECYLDTNNA 201 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 Q+ N + F + +A +T Sbjct: 202 AFQRYLHNPYNHNRVFLENILTLENAVLDT 231 >gi|293371778|ref|ZP_06618188.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f] gi|292633230|gb|EFF51801.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f] Length = 337 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 17/88 (19%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A D+ VP+ R+R++ I F F++PTP KP L + + + Sbjct: 144 LNANDYDVPEDRDRVFYIGFRKDLNIHNFEYPTPQKHKPTLRESIWD------------- 190 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSAT 86 Q K G N+ Sbjct: 191 --LQFTAIPALEKNKTNGKACKIPNNEY 216 >gi|329123495|ref|ZP_08252059.1| modification methylase HaeIII [Haemophilus aegyptius ATCC 11116] gi|327471077|gb|EGF16532.1| modification methylase HaeIII [Haemophilus aegyptius ATCC 11116] Length = 217 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 16/87 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GV Q R+R++ I F ++ + P P IKP D++ + Sbjct: 29 LNANDYGVAQDRKRVFYIGFRKELNINYLPPIPHLIKPTFKDVIWD-------------- 74 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSAT 86 + K G + N Sbjct: 75 -LKDNPIPALDKNKTNGNKCIYPNHEY 100 >gi|317177871|dbj|BAJ55660.1| Type II DNA modification enzyme [Helicobacter pylori F16] Length = 319 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 4/90 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q+RERLYI+ F F FP L D L+ D + Sbjct: 145 LNSADFQLAQKRERLYIVGFRKDLKHSFNFPLGLANDYCFKDFLDA---DNECYLDTNNA 201 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 Q+ N + F + +A +T Sbjct: 202 AFQRYLHNPYNHNRVFLENILTLENAVLDT 231 >gi|254825117|ref|ZP_05230118.1| DNA-cytosine methyltransferase [Listeria monocytogenes FSL J1-194] gi|293594360|gb|EFG02121.1| DNA-cytosine methyltransferase [Listeria monocytogenes FSL J1-194] Length = 326 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 4/94 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + DFG+PQ+RER+Y + L+ +F F R + LE +DD + K+ Sbjct: 149 LNPMDFGIPQKRERIYTVSVLSGP-QFDFSKLKKEPMRPINEFLETDVDD--IYTIKIPS 205 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 K ++ N T+S R Sbjct: 206 MLTKIEDLNMQRKNAKYNRFLDVIETHCWTISTR 239 >gi|30523050|gb|AAP31838.1| AsiSI methylase [Arthrobacter sp. S] Length = 390 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 7/60 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF-PTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ R+RL +I EF F P P G + T S+ LW+ Sbjct: 154 LNAADWGVPQARKRLILIAVR-DVAEFSFPPKPTHSGDPSGSL-----RPYRTASDALWD 207 >gi|157419765|gb|ABV55454.1| DNA methylase [Streptococcus dysgalactiae subsp. equisimilis] Length = 451 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKS 51 + + DF VPQ RER++II F FP P + L K Sbjct: 148 LNSKDFQVPQNRERVFIIGHSRRYRSRFIFPLRREDSPAHLERLGNINPSKH 199 >gi|257466254|ref|ZP_05630565.1| DNA (cytosine-5-)-methyltransferase [Fusobacterium gonidiaformans ATCC 25563] Length = 353 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 33/84 (39%), Gaps = 3/84 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPL---GIKPRLGDILEEHIDDKSTISNKL 57 + A ++GVPQ R+R + + LN F FP P+ D + + + +++ Sbjct: 154 LYAPEYGVPQIRKRAFFVGLLNSKEGFTFPEPILSSENFVTCEDAIGDLPSLEGIYGDEI 213 Query: 58 WEGHQKRKENNKIAGKGFGYGLFF 81 E + + + L+ Sbjct: 214 QEYECSPQTKYQAEMRKNSTKLYN 237 >gi|253755079|ref|YP_003028219.1| C-5 cytosine-specific DNA methylase [Streptococcus suis BM407] gi|251817543|emb|CAZ55290.1| C-5 cytosine-specific DNA methylase [Streptococcus suis BM407] Length = 451 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 3/83 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF VPQ RER++II F FP P + L K ++ ++ Sbjct: 148 LNSKDFQVPQNRERVFIIGHSRRYRSRFIFPLRGENSPAHLERLGNINPSKRGLNGEV-- 205 Query: 60 GHQKRKENNKIAGKGFGYGLFFE 82 GKG G + Sbjct: 206 YLTSGLAPTLTRGKGEGAKIAIP 228 >gi|317182374|dbj|BAJ60158.1| Type II DNA modification enzyme [Helicobacter pylori F57] Length = 318 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 4/90 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q+RERLYI+ F F FP L D L+ D + Sbjct: 145 LNSADFQLAQKRERLYIVGFRKDLKHPFNFPLGLANDYCFKDFLDA---DNECYLDTNNA 201 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 Q+ N + F + +A +T Sbjct: 202 AFQRYLHNPYNHNRVFLENILTLENAVLDT 231 >gi|1709158|sp|P50192|MTHA_HAEPH RecName: Full=Modification methylase HphIA; Short=M.HphIA; AltName: Full=Cytosine-specific methyltransferase HphIA; AltName: Full=M.Hphi(C) gi|732729|emb|CAA59690.1| site-specific DNA-methyltransferase (cytosine-specific) [Haemophilus parahaemolyticus] Length = 372 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP-RLGDILEEHID 48 + A DFGVPQ R R+ I E FP P + +GD + Sbjct: 195 LNAADFGVPQLRSRIVFIG-RKDGGEITFPEPSHTEYNTVGDAIGHFPK 242 >gi|313683546|ref|YP_004061284.1| DNA-cytosine methyltransferase [Sulfuricurvum kujiense DSM 16994] gi|313156406|gb|ADR35084.1| DNA-cytosine methyltransferase [Sulfuricurvum kujiense DSM 16994] Length = 332 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A DFGVPQ R R+ ++ F +P P +G+ L + I + + W Sbjct: 154 INAKDFGVPQLRPRVILVGLRKNIFPYFSWPDSYLEAPTVGEALYDLIASDGWVHAEQW 212 >gi|284803522|emb|CBJ23522.1| putative methyltransferase [Streptococcus pneumoniae] Length = 372 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 4/83 (4%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFP---TPLGIKPRLGDILEEHIDDKSTISNK 56 + + DFGVPQ RER++II FP P IL KS +S K Sbjct: 2 LNSKDFGVPQNRERVFIIGHSRKRGTRLLFPFRREGQATNPETLKILGNLNPSKSGMSGK 61 Query: 57 LWEGHQKRKENNKIAGKGFGYGL 79 ++ + G+GF + Sbjct: 62 VYYSEGLAPTLVRGKGEGFKIAI 84 >gi|310830454|ref|YP_003965555.1| Cytosine-specific methyltransferase [Paenibacillus polymyxa SC2] gi|309249921|gb|ADO59487.1| Cytosine-specific methyltransferase [Paenibacillus polymyxa SC2] Length = 267 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 37/101 (36%), Gaps = 4/101 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGI--KPRLGDILEEHIDDKSTISNKL 57 + D+GVPQ R+R+ ++ + F+FP P+ + + + D + + +N Sbjct: 23 LNCWDYGVPQLRKRVIVVGIRKDLDKHFEFPPPVPLEERTTIRDAIGDLPCPDGK-NNHQ 81 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 G +K + G L Y+ G Sbjct: 82 GYGIRKDEIPYVDKIPPGGNWRDLPCEDQIQFLGKAYHSGG 122 >gi|315917412|ref|ZP_07913652.1| cytosine specific DNA methyltransferase [Fusobacterium gonidiaformans ATCC 25563] gi|313691287|gb|EFS28122.1| cytosine specific DNA methyltransferase [Fusobacterium gonidiaformans ATCC 25563] Length = 358 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 33/84 (39%), Gaps = 3/84 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPL---GIKPRLGDILEEHIDDKSTISNKL 57 + A ++GVPQ R+R + + LN F FP P+ D + + + +++ Sbjct: 159 LYAPEYGVPQIRKRAFFVGLLNSKEGFTFPEPILSSENFVTCEDAIGDLPSLEGIYGDEI 218 Query: 58 WEGHQKRKENNKIAGKGFGYGLFF 81 E + + + L+ Sbjct: 219 QEYECSPQTKYQAEMRKNSTKLYN 242 >gi|331002102|ref|ZP_08325621.1| hypothetical protein HMPREF0491_00483 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411196|gb|EGG90612.1| hypothetical protein HMPREF0491_00483 [Lachnospiraceae oral taxon 107 str. F0167] Length = 309 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 5/91 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFG+PQ+RER++++ L + F F KP+ DI E D S++ E Sbjct: 145 LNAMDFGIPQKRERIFVVSILGKN-NFDFNKLNKTKPK--DISEFLEKDVSSVYEVRQES 201 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + N+ G + T+S Sbjct: 202 MLRFLRNDPKNKNFKGRLMII--DKFAYTIS 230 >gi|315587009|gb|ADU41390.1| C-5 cytosine-specific DNA methylase [Helicobacter pylori 35A] Length = 313 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 4/90 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q+RERLYI+ F F FP L D L+ + + Sbjct: 139 LNSADFQLAQKRERLYIVGFRKDLKHPFNFPLGLANDYCFKDFLDAGNE---CYLDTNNA 195 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 Q+ N + F + + +T Sbjct: 196 AFQRYLRNQYNHNRVFLENILTLENTVLDT 225 >gi|225856779|ref|YP_002738290.1| methyl transferase [Streptococcus pneumoniae P1031] gi|225724445|gb|ACO20297.1| methyl transferase [Streptococcus pneumoniae P1031] Length = 452 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 4/83 (4%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILE---EHIDDKSTISNK 56 + + DFGVPQ RER++II FP + + L+ KS +S K Sbjct: 148 LNSKDFGVPQNRERVFIIGHSRKRGTRLLFPFRREGQTTNSETLKTLGNLNPSKSGMSGK 207 Query: 57 LWEGHQKRKENNKIAGKGFGYGL 79 ++ + G+GF + Sbjct: 208 VYYSEGLAPTLVRGKGEGFKVAI 230 >gi|59801103|ref|YP_207815.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae FA 1090] gi|121634967|ref|YP_975212.1| DNA modification methylase [Neisseria meningitidis FAM18] gi|194098793|ref|YP_002001855.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae NCCP11945] gi|239999085|ref|ZP_04719009.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae 35/02] gi|240014008|ref|ZP_04720921.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae DGI18] gi|240016449|ref|ZP_04722989.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae FA6140] gi|240080568|ref|ZP_04725111.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae FA19] gi|240113063|ref|ZP_04727553.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae MS11] gi|240115818|ref|ZP_04729880.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae PID18] gi|240118116|ref|ZP_04732178.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae PID1] gi|240121574|ref|ZP_04734536.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae PID24-1] gi|240123666|ref|ZP_04736622.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae PID332] gi|240125856|ref|ZP_04738742.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae SK-92-679] gi|254493863|ref|ZP_05107034.1| DNA modification methylase [Neisseria gonorrhoeae 1291] gi|260440365|ref|ZP_05794181.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae DGI2] gi|268594923|ref|ZP_06129090.1| DNA modification methylase [Neisseria gonorrhoeae 35/02] gi|268596698|ref|ZP_06130865.1| DNA modification methylase [Neisseria gonorrhoeae FA19] gi|268599147|ref|ZP_06133314.1| DNA modification methylase [Neisseria gonorrhoeae MS11] gi|268601493|ref|ZP_06135660.1| DNA modification methylase [Neisseria gonorrhoeae PID18] gi|268603831|ref|ZP_06137998.1| DNA modification methylase [Neisseria gonorrhoeae PID1] gi|268682295|ref|ZP_06149157.1| DNA modification methylase [Neisseria gonorrhoeae PID332] gi|268684453|ref|ZP_06151315.1| DNA modification methylase [Neisseria gonorrhoeae SK-92-679] gi|291043662|ref|ZP_06569378.1| DNA modification methylase [Neisseria gonorrhoeae DGI2] gi|293398965|ref|ZP_06643130.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|59717998|gb|AAW89403.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae FA 1090] gi|120866673|emb|CAM10425.1| DNA modification methylase [Neisseria meningitidis FAM18] gi|193934083|gb|ACF29907.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae NCCP11945] gi|226512903|gb|EEH62248.1| DNA modification methylase [Neisseria gonorrhoeae 1291] gi|268548312|gb|EEZ43730.1| DNA modification methylase [Neisseria gonorrhoeae 35/02] gi|268550486|gb|EEZ45505.1| DNA modification methylase [Neisseria gonorrhoeae FA19] gi|268583278|gb|EEZ47954.1| DNA modification methylase [Neisseria gonorrhoeae MS11] gi|268585624|gb|EEZ50300.1| DNA modification methylase [Neisseria gonorrhoeae PID18] gi|268587962|gb|EEZ52638.1| DNA modification methylase [Neisseria gonorrhoeae PID1] gi|268622579|gb|EEZ54979.1| DNA modification methylase [Neisseria gonorrhoeae PID332] gi|268624737|gb|EEZ57137.1| DNA modification methylase [Neisseria gonorrhoeae SK-92-679] gi|291012125|gb|EFE04114.1| DNA modification methylase [Neisseria gonorrhoeae DGI2] gi|291610379|gb|EFF39489.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|317164377|gb|ADV07918.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae TCDC-NG08107] Length = 423 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 3/79 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH-IDDKSTISNKLWE 59 + A DFG+PQ R+R+Y+ L + F P+L +ILE + S KL + Sbjct: 158 LNAKDFGIPQNRKRIYLTGSLKSKPDLSF--ETSPSPKLKNILESGLPTESSPFIKKLLK 215 Query: 60 GHQKRKENNKIAGKGFGYG 78 + K G Sbjct: 216 KFPPSELYGKSVKDKRGGK 234 >gi|330936955|gb|EGH41063.1| HsdRM [Pseudomonas syringae pv. pisi str. 1704B] Length = 313 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 14/102 (13%), Positives = 30/102 (29%), Gaps = 24/102 (23%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPL------GIKPRLGDILEEHID---DK 50 + A +FGV Q R+R++I+ +++ FP + D + + + + Sbjct: 141 LNAAEFGVAQERKRIFIVGIRKDFGIKYVFPEATHGDEKAHAGVTIHDAIGDMPEWPAGE 200 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 W + T+ A Sbjct: 201 FYDLPFHWYYLS--------------RDRRNAWDQQSRTIVA 228 >gi|240118874|ref|ZP_04732936.1| DcmB [Neisseria gonorrhoeae PID1] Length = 325 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 11/86 (12%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPT----PLGIKPRLGDILEEHIDDKSTISNK 56 A D+GV Q R+R++ I F ++F FP K L D++ + D + Sbjct: 140 NAKDYGVAQERKRVFYIGFRKDLEIKFSFPKGSTVENKDKITLKDVIWDLQDTAVPSAP- 198 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFE 82 Q + + + + G F Sbjct: 199 -----QNKTNPDAVNNNEYFTGSFSP 219 >gi|240128365|ref|ZP_04741026.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae SK-93-1035] gi|268686763|ref|ZP_06153625.1| DNA modification methylase [Neisseria gonorrhoeae SK-93-1035] gi|268627047|gb|EEZ59447.1| DNA modification methylase [Neisseria gonorrhoeae SK-93-1035] Length = 423 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 3/79 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH-IDDKSTISNKLWE 59 + A DFG+PQ R+R+Y+ L + F P+L +ILE + S KL + Sbjct: 158 LNAKDFGIPQNRKRIYLTGSLKSKPDLSF--ETSPSPKLKNILESGLPTESSPFIKKLLK 215 Query: 60 GHQKRKENNKIAGKGFGYG 78 + K G Sbjct: 216 KFPPSELYGKSVKDKRGGK 234 >gi|218768275|ref|YP_002342787.1| DNA modification methylase [Neisseria meningitidis Z2491] gi|121052283|emb|CAM08611.1| DNA modification methylase [Neisseria meningitidis Z2491] Length = 423 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 3/79 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH-IDDKSTISNKLWE 59 + A DFG+PQ R+R+Y+ L + F P+L +ILE + S KL + Sbjct: 158 LNAKDFGIPQNRKRIYLTGSLKSKPDLSF--ETSPSPKLKNILESGLPTESSPFIKKLLK 215 Query: 60 GHQKRKENNKIAGKGFGYG 78 + K G Sbjct: 216 KFPPSELYGKSVKDKRGGK 234 >gi|293975|gb|AAB59071.1| cytosine methylase [Neisseria gonorrhoeae] Length = 341 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 11/86 (12%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPT----PLGIKPRLGDILEEHIDDKSTISNK 56 A D+GV Q R+R++ I F ++F FP K L D++ + D + Sbjct: 156 NAKDYGVAQERKRVFYIGFRKDLEIKFSFPKGSTVEDKDKITLKDVIWDLQDTAVPSAP- 214 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFE 82 Q + + + + G F Sbjct: 215 -----QNKTNPDAVNNNEYFTGSFSP 235 >gi|182684309|ref|YP_001836056.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae CGSP14] gi|221232093|ref|YP_002511246.1| DNA methylase [Streptococcus pneumoniae ATCC 700669] gi|182629643|gb|ACB90591.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae CGSP14] gi|220674554|emb|CAR69117.1| putative DNA methylase [Streptococcus pneumoniae ATCC 700669] Length = 452 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 4/83 (4%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILE---EHIDDKSTISNK 56 + + DFGVPQ RER++II + FP + + L+ KS +S K Sbjct: 148 LNSKDFGVPQNRERVFIIGHSRKKGIRLLFPFRREGQATNSETLKTLGNLNPSKSGMSGK 207 Query: 57 LWEGHQKRKENNKIAGKGFGYGL 79 ++ + G+GF + Sbjct: 208 VYYSEGLAPTLVRGKGEGFKIAI 230 >gi|268604583|ref|ZP_06138750.1| cytosine methylase [Neisseria gonorrhoeae PID1] gi|268588714|gb|EEZ53390.1| cytosine methylase [Neisseria gonorrhoeae PID1] Length = 341 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 11/86 (12%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPT----PLGIKPRLGDILEEHIDDKSTISNK 56 A D+GV Q R+R++ I F ++F FP K L D++ + D + Sbjct: 156 NAKDYGVAQERKRVFYIGFRKDLEIKFSFPKGSTVENKDKITLKDVIWDLQDTAVPSAP- 214 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFE 82 Q + + + + G F Sbjct: 215 -----QNKTNPDAVNNNEYFTGSFSP 235 >gi|240081638|ref|ZP_04726181.1| DcmB [Neisseria gonorrhoeae FA19] gi|240113919|ref|ZP_04728409.1| DcmB [Neisseria gonorrhoeae MS11] gi|240116652|ref|ZP_04730714.1| DcmB [Neisseria gonorrhoeae PID18] gi|240129088|ref|ZP_04741749.1| DcmB [Neisseria gonorrhoeae SK-93-1035] Length = 325 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 11/86 (12%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPT----PLGIKPRLGDILEEHIDDKSTISNK 56 A D+GV Q R+R++ I F ++F FP K L D++ + D + Sbjct: 140 NAKDYGVAQERKRVFYIGFRKDLEIKFSFPKGSTVEDKDKITLKDVIWDLQDTAVPSAP- 198 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFE 82 Q + + + + G F Sbjct: 199 -----QNKTNPDAVNNNEYFTGSFSP 219 >gi|167009507|ref|ZP_02274438.1| modification methylase HaeIII [Francisella tularensis subsp. holarctica FSC200] Length = 111 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDD 49 + + DF VPQ R+R++ + F F T K L D + + + Sbjct: 29 LNSSDFKVPQDRQRVFFVGIRKDLGFNFNFSTNTYPKITLKDAIWDLRES 78 >gi|160873497|ref|YP_001552813.1| DNA-cytosine methyltransferase [Shewanella baltica OS195] gi|160859019|gb|ABX47553.1| DNA-cytosine methyltransferase [Shewanella baltica OS195] gi|315265725|gb|ADT92578.1| DNA-cytosine methyltransferase [Shewanella baltica OS678] Length = 385 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 5/45 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNP----SVEFKFPTPLGIKPRLGD 41 + A D+GVPQ R+R++I N + F P P + Sbjct: 158 LNAKDYGVPQNRKRVFIFGTRNDLKINNPAFP-PDATHFAPTSKN 201 >gi|194099965|ref|YP_002003104.1| Modification methylase NgoPII [Neisseria gonorrhoeae NCCP11945] gi|239997973|ref|ZP_04717897.1| Modification methylase NgoPII [Neisseria gonorrhoeae 35/02] gi|240015049|ref|ZP_04721962.1| Modification methylase NgoPII [Neisseria gonorrhoeae DGI18] gi|240017498|ref|ZP_04724038.1| Modification methylase NgoPII [Neisseria gonorrhoeae FA6140] gi|240122118|ref|ZP_04735080.1| Modification methylase NgoPII [Neisseria gonorrhoeae PID24-1] gi|240124411|ref|ZP_04737367.1| Modification methylase NgoPII [Neisseria gonorrhoeae PID332] gi|240124717|ref|ZP_04737603.1| Modification methylase NgoPII [Neisseria gonorrhoeae SK-92-679] gi|254494673|ref|ZP_05107844.1| modification methylase HaeIII [Neisseria gonorrhoeae 1291] gi|260439589|ref|ZP_05793405.1| Modification methylase NgoPII [Neisseria gonorrhoeae DGI2] gi|268599983|ref|ZP_06134150.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae MS11] gi|268602320|ref|ZP_06136487.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae PID18] gi|268683040|ref|ZP_06149902.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae PID332] gi|268683292|ref|ZP_06150154.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae SK-92-679] gi|268687469|ref|ZP_06154331.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae SK-93-1035] gi|462655|sp|P08455|MTP2_NEIGO RecName: Full=Modification methylase NgoPII; Short=M.NgoPII; AltName: Full=Cytosine-specific methyltransferase NgoPII gi|193935255|gb|ACF31079.1| Modification methylase NgoPII [Neisseria gonorrhoeae NCCP11945] gi|226513713|gb|EEH63058.1| modification methylase HaeIII [Neisseria gonorrhoeae 1291] gi|268584114|gb|EEZ48790.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae MS11] gi|268586451|gb|EEZ51127.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae PID18] gi|268623324|gb|EEZ55724.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae PID332] gi|268623576|gb|EEZ55976.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae SK-92-679] gi|268627753|gb|EEZ60153.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae SK-93-1035] gi|317165417|gb|ADV08958.1| DcmB [Neisseria gonorrhoeae TCDC-NG08107] Length = 330 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 11/86 (12%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPT----PLGIKPRLGDILEEHIDDKSTISNK 56 A D+GV Q R+R++ I F ++F FP K L D++ + D + Sbjct: 145 NAKDYGVAQERKRVFYIGFRKDLEIKFSFPKGSTVEDKDKITLKDVIWDLQDTAVPSAP- 203 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFE 82 Q + + + + G F Sbjct: 204 -----QNKTNPDAVNNNEYFTGSFSP 224 >gi|161870123|ref|YP_001599293.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis 053442] gi|225075874|ref|ZP_03719073.1| hypothetical protein NEIFLAOT_00897 [Neisseria flavescens NRL30031/H210] gi|296313674|ref|ZP_06863615.1| DNA (cytosine-5-)-methyltransferase [Neisseria polysaccharea ATCC 43768] gi|161595676|gb|ABX73336.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis 053442] gi|224952820|gb|EEG34029.1| hypothetical protein NEIFLAOT_00897 [Neisseria flavescens NRL30031/H210] gi|296839734|gb|EFH23672.1| DNA (cytosine-5-)-methyltransferase [Neisseria polysaccharea ATCC 43768] Length = 423 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 3/79 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH-IDDKSTISNKLWE 59 + A DFG+PQ R+R+Y+ L + F + P+L +ILE + S KL + Sbjct: 158 LNAKDFGIPQNRKRIYLTGSLKSKPDLSF--ETTLSPKLKNILESGLPTESSPFIKKLLK 215 Query: 60 GHQKRKENNKIAGKGFGYG 78 + K G Sbjct: 216 KFPPSELYGKSVKDKRGGK 234 >gi|59802113|ref|YP_208825.1| DcmB [Neisseria gonorrhoeae FA 1090] gi|268593822|ref|ZP_06127989.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria gonorrhoeae 35/02] gi|268597735|ref|ZP_06131902.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria gonorrhoeae FA19] gi|291042825|ref|ZP_06568566.1| site-specific DNA-methyltransferase M.NgoPII [Neisseria gonorrhoeae DGI2] gi|293398154|ref|ZP_06642359.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|44873|emb|CAA30038.1| unnamed protein product [Neisseria gonorrhoeae] gi|44888|emb|CAA36888.1| NgoPII restriction and modification [Neisseria gonorrhoeae] gi|293960|gb|AAA17019.1| cytosine methylase [Neisseria gonorrhoeae] gi|59719008|gb|AAW90413.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria gonorrhoeae FA 1090] gi|268547211|gb|EEZ42629.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria gonorrhoeae 35/02] gi|268551523|gb|EEZ46542.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria gonorrhoeae FA19] gi|291013259|gb|EFE05225.1| site-specific DNA-methyltransferase M.NgoPII [Neisseria gonorrhoeae DGI2] gi|291611417|gb|EFF40487.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|227054|prf||1613419B NgoPII methylase Length = 341 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 11/86 (12%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPT----PLGIKPRLGDILEEHIDDKSTISNK 56 A D+GV Q R+R++ I F ++F FP K L D++ + D + Sbjct: 156 NAKDYGVAQERKRVFYIGFRKDLEIKFSFPKGSTVEDKDKITLKDVIWDLQDTAVPSAP- 214 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFE 82 Q + + + + G F Sbjct: 215 -----QNKTNPDAVNNNEYFTGSFSP 235 >gi|15676920|ref|NP_274067.1| modification methylase NlaIV [Neisseria meningitidis MC58] gi|7226272|gb|AAF41432.1| modification methylase NlaIV [Neisseria meningitidis MC58] gi|325136241|gb|EGC58849.1| DNA-cytosine methyltransferase [Neisseria meningitidis M0579] gi|325202033|gb|ADY97487.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240149] gi|325208214|gb|ADZ03666.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis NZ-05/33] Length = 423 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 3/79 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH-IDDKSTISNKLWE 59 + A DFG+PQ R+R+Y+ L + F + P+L +ILE + S KL + Sbjct: 158 LNAKDFGIPQNRKRIYLTGSLKSKPDLSF--ETTLSPKLKNILESGLPTESSPFIKKLLK 215 Query: 60 GHQKRKENNKIAGKGFGYG 78 + K G Sbjct: 216 KFPPSELYGKSVKDKRGGK 234 >gi|126667824|ref|ZP_01738791.1| C-5 cytosine-specific DNA methylase [Marinobacter sp. ELB17] gi|126627772|gb|EAZ98402.1| C-5 cytosine-specific DNA methylase [Marinobacter sp. ELB17] Length = 327 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 8/102 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKP---RLGDILEEHIDDKSTIS 54 + D+G + R+RL +I F + ++ L DIL+ +D S Sbjct: 209 LNGNDYGCIENRDRLVVIAISKSLQALGGFDMSDIIPVRTKEATLNDILDPISEDDSAW- 267 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 K+ E +K++ ++ AGKGF L+ + N L+ Y K Sbjct: 268 -KIHEYLEKKEVSDIAAGKGFRRQLYTGAEESINVLTRGYAK 308 >gi|194396841|ref|YP_002037999.1| Tn5253 C-5 cytosine-specific DNA methylase [Streptococcus pneumoniae G54] gi|194356508|gb|ACF54956.1| Tn5253 C-5 cytosine-specific DNA methylase [Streptococcus pneumoniae G54] Length = 452 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 4/83 (4%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILE---EHIDDKSTISNK 56 + + DFGVPQ RER++II FP + + L+ KS +S K Sbjct: 148 LNSKDFGVPQNRERVFIIGHSRKKGTRLLFPFRREGQATNSETLKTLGNLNPSKSGMSGK 207 Query: 57 LWEGHQKRKENNKIAGKGFGYGL 79 ++ + G+GF + Sbjct: 208 VYYSEGLAPTLVRGKGEGFKVAI 230 >gi|241666957|ref|YP_002985041.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862414|gb|ACS60079.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 393 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 10/68 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A + GVPQRRER+ + F + +++ FP L +L + + W+ Sbjct: 181 LNAANHGVPQRRERVVFVGFRSDLDIKWAFPAETH---SLDALLWDQVHGD------YWD 231 Query: 60 GHQKRKEN 67 H+ RK + Sbjct: 232 RHRVRKAD 239 >gi|323650438|gb|ADX97294.1| M.Cac8I [Clostridium acetobutylicum] Length = 398 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 28/91 (30%), Gaps = 5/91 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE----FKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A +FGVPQ RER+ I+ N + + P + L K K Sbjct: 181 LNAYNFGVPQNRERVIIVGIRNDLRDRYIIPQKPAVKNKRKTLFVKPTHSKTSKLGEELK 240 Query: 57 LWEGH-QKRKENNKIAGKGFGYGLFFENSAT 86 W+ L EN T Sbjct: 241 PWQKINYLYNLWTNGKLDSNKNYLVNENDET 271 >gi|306833678|ref|ZP_07466805.1| DNA (cytosine-5-)-methyltransferase [Streptococcus bovis ATCC 700338] gi|304424448|gb|EFM27587.1| DNA (cytosine-5-)-methyltransferase [Streptococcus bovis ATCC 700338] Length = 451 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 3/83 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF VPQ RER++II F FP P + L K ++ ++ Sbjct: 148 LNSKDFQVPQNRERVFIIGHSRRNRSRFLFPLRGEDSPAHLERLGNINPSKRGLNGEV-- 205 Query: 60 GHQKRKENNKIAGKGFGYGLFFE 82 GKG G + Sbjct: 206 YLTSGLAPTLTRGKGEGAKIAIP 228 >gi|304387455|ref|ZP_07369646.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] gi|304338548|gb|EFM04667.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] Length = 273 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 3/79 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH-IDDKSTISNKLWE 59 + A DFG+PQ R+R+Y+ L + F P+L +ILE + S KL + Sbjct: 158 LNAKDFGIPQNRKRIYLTGSLKSKPDLSF--ETSPSPKLKNILESGLPTESSPFIKKLLK 215 Query: 60 GHQKRKENNKIAGKGFGYG 78 + K G Sbjct: 216 KFPPSELYGKSVKDKRGGK 234 >gi|254673505|emb|CBA08927.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis alpha275] Length = 273 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 3/79 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH-IDDKSTISNKLWE 59 + A DFG+PQ R+R+Y+ L + F P+L +ILE + S KL + Sbjct: 158 LNAKDFGIPQNRKRIYLTGSLKSKPDLSF--ETSPSPKLKNILESGLPTESSPFIKKLLK 215 Query: 60 GHQKRKENNKIAGKGFGYG 78 + K G Sbjct: 216 KFPPSELYGKSVKDKRGGK 234 >gi|325130383|gb|EGC53149.1| DNA-cytosine methyltransferase [Neisseria meningitidis OX99.30304] Length = 425 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 3/79 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH-IDDKSTISNKLWE 59 + A DFG+PQ R+R+Y+ L + F + P+L +ILE + S KL + Sbjct: 158 LNAKDFGIPQNRKRIYLTGSLKSKPDLSF--ETTLSPKLKNILESGLPTESSPFIKKLLK 215 Query: 60 GHQKRKENNKIAGKGFGYG 78 + K G Sbjct: 216 KFPPSELYGKSVKDKRGGK 234 >gi|308184574|ref|YP_003928707.1| site-specific DNA methylase [Helicobacter pylori SJM180] gi|308060494|gb|ADO02390.1| site-specific DNA methylase [Helicobacter pylori SJM180] Length = 405 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 13/98 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG------------IKPRLGDILEEHID 48 +KA D+GVPQ RER+ II FP + D++ + Sbjct: 148 LKASDYGVPQHRERVIIIGNRLGLKN-PFPKKTHGLCNDLFNEKLKPYVCVKDVVGHLAN 206 Query: 49 DKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSAT 86 ++ ++ + +G + +G + Sbjct: 207 VRTRDASFMLDGVMIHNHVARTNVYDTFWGRKHPINQH 244 >gi|307153788|ref|YP_003889172.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] gi|306984016|gb|ADN15897.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] Length = 424 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 9/63 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPL---------GIKPRLGDILEEHIDDKS 51 + A +GVPQ RERL+++ V ++P P+ P + + L++ + Sbjct: 160 LNAAHYGVPQNRERLFLLGSQKGLVLPQYPEPITAPNPFQNLSKTPTVWEALQDLPEVNH 219 Query: 52 TIS 54 Sbjct: 220 YPE 222 >gi|75906326|ref|YP_320622.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413] gi|75700051|gb|ABA19727.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413] Length = 431 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 21/41 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGD 41 + A +GVPQ RERL++I K+P P+ + + Sbjct: 168 LNAAHYGVPQARERLFLIGAREDVKLPKYPKPITKPAKSNN 208 >gi|307637790|gb|ADN80240.1| DNA-cytosine methyl transferase [Helicobacter pylori 908] gi|325996388|gb|ADZ51793.1| DNA-cytosine methyltransferase [Helicobacter pylori 2018] gi|325997976|gb|ADZ50184.1| Type II DNA modification enzyme/ methyltransferase [Helicobacter pylori 2017] Length = 318 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 4/90 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q+RERLYI+ F F FP L D L+ D + Sbjct: 145 LNSADFQLAQKRERLYIVGFRKDLKRPFSFPLGLANDYCFNDFLDA---DNECYLDVSNA 201 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 Q+ N + F + +A +T Sbjct: 202 IFQRYLCNPYNHNRVFLENILTLENAVLDT 231 >gi|210135280|ref|YP_002301719.1| type II R-M system methyltransferase [Helicobacter pylori P12] gi|210133248|gb|ACJ08239.1| type II R-M system methyltransferase [Helicobacter pylori P12] Length = 315 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q RER+YI+ F F FP L D L+ + I+N ++ Sbjct: 139 LNSADFQLAQNRERIYIVGFRKDLKHPFNFPLGLANDYYFKDFLDADNECYLDINNATFQ 198 Query: 60 GHQKRKENN 68 + K N+ Sbjct: 199 KYLHNKYNH 207 >gi|261400634|ref|ZP_05986759.1| DNA (cytosine-5-)-methyltransferase [Neisseria lactamica ATCC 23970] gi|313668389|ref|YP_004048673.1| DNA modification methylase [Neisseria lactamica ST-640] gi|1709164|sp|P50182|MTN4_NEILA RecName: Full=Modification methylase NlaIV; Short=M.NlaIV; AltName: Full=Cytosine-specific methyltransferase NlaIV gi|476227|gb|AAA53237.1| M.NlaIV [Neisseria lactamica] gi|269209540|gb|EEZ75995.1| DNA (cytosine-5-)-methyltransferase [Neisseria lactamica ATCC 23970] gi|313005851|emb|CBN87307.1| DNA modification methylase [Neisseria lactamica 020-06] Length = 423 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 3/79 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH-IDDKSTISNKLWE 59 + A DFG+PQ R+R+Y+ L + F P+L +ILE + S KL + Sbjct: 158 LNAKDFGIPQNRKRIYLTGSLKSKPDLSF--ETTPSPKLKNILESGLPTESSPFIKKLLK 215 Query: 60 GHQKRKENNKIAGKGFGYG 78 + K G Sbjct: 216 KFPPSELYGKSVKDKRGGK 234 >gi|323487872|ref|ZP_08093130.1| cytosine-specific methyltransferase [Planococcus donghaensis MPA1U2] gi|323398606|gb|EGA91394.1| cytosine-specific methyltransferase [Planococcus donghaensis MPA1U2] Length = 367 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 11/104 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-----FKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + + DFGVPQ+RER++ I FLN ++ + + K + + + + + Sbjct: 149 LNSADFGVPQKRERVFFIGFLNKDIDSNQMMARIMSKKKNKVTVRESISHLPPAGNEENP 208 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFFEN------SATTNTLSAR 93 +N + + LF +NTL A Sbjct: 209 ITCTAKITLAKNPIMRKSPYAGMLFNGMGRPINIDEASNTLPAS 252 >gi|119510471|ref|ZP_01629604.1| DNA cytosine methylase [Nodularia spumigena CCY9414] gi|119464893|gb|EAW45797.1| DNA cytosine methylase [Nodularia spumigena CCY9414] Length = 727 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 2/77 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 + DFG+PQ RER+ + + FK P L + L + + Sbjct: 147 NSRDFGLPQNRERVVFVATKDKKFNFKTLQKSHPVPTLREFLCTSGKFEYLNPEEY--TM 204 Query: 62 QKRKENNKIAGKGFGYG 78 + GY Sbjct: 205 IDYPKQQASGLIFVGYR 221 >gi|108563484|ref|YP_627800.1| type II DNA modification enzyme [Helicobacter pylori HPAG1] gi|107837257|gb|ABF85126.1| type II DNA modification enzyme [Helicobacter pylori HPAG1] Length = 313 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 4/90 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q+RERLYI+ F F FP L D L+ D + Sbjct: 139 LNSADFQLAQKRERLYIVGFRKDLKHPFNFPLGLANDYCFNDFLDA---DNECYLDTNNA 195 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 Q+ N + F + +A +T Sbjct: 196 TFQRYLRNRYNHNRVFLEDILTLENAVLDT 225 >gi|269214273|ref|ZP_05986228.2| modification methylase NgoPII [Neisseria lactamica ATCC 23970] gi|269210330|gb|EEZ76785.1| modification methylase NgoPII [Neisseria lactamica ATCC 23970] Length = 330 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 11/86 (12%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPT----PLGIKPRLGDILEEHIDDKSTISNK 56 A D+GV Q R+R++ I F ++F FP K L D++ + D + Sbjct: 145 NAKDYGVAQERKRVFYIGFRKDLEIQFSFPKGSTVEDKDKITLRDVIWDLQDTAVPSAP- 203 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFE 82 Q + + + + G F Sbjct: 204 -----QNKTNPDAVNNNEYFTGSFSP 224 >gi|17229768|ref|NP_486316.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120] gi|17131367|dbj|BAB73975.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120] Length = 431 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 21/41 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGD 41 + A +GVPQ RERL++I K+P P+ + + Sbjct: 168 LNAAHYGVPQARERLFLIGAREDVKLPKYPKPITKPAKSNN 208 >gi|240143270|ref|ZP_04741871.1| modification methylase BspRI [Roseburia intestinalis L1-82] gi|257204748|gb|EEV03033.1| modification methylase BspRI [Roseburia intestinalis L1-82] Length = 432 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 3/36 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF--PTPLG 34 + + ++GVPQ RER+ ++ N ++F++ P P Sbjct: 226 LNSAEYGVPQIRERVILVGVRND-IDFEYVHPEPTH 260 >gi|239982029|ref|ZP_04704553.1| DNA modification methylase [Streptomyces albus J1074] gi|291453880|ref|ZP_06593270.1| C-5 cytosine-specific DNA methylase [Streptomyces albus J1074] gi|291356829|gb|EFE83731.1| C-5 cytosine-specific DNA methylase [Streptomyces albus J1074] Length = 409 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLGIKPRLGDILEEHI 47 + A D+GVPQ R R ++ F +P P + + LEE + Sbjct: 183 LHAQDYGVPQLRPRAILVAIRKDQYRGFDWPAPRKKLRTVAEALEESM 230 >gi|303236368|ref|ZP_07322958.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN] gi|302483426|gb|EFL46431.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN] Length = 357 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 37/107 (34%), Gaps = 12/107 (11%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTP---LGIKPRLGDILEEHIDDKSTISNKLWE 59 A D+GVPQ R+RL + N +F+FP P + + + +++ Sbjct: 157 AADYGVPQIRKRLVFVGLKNNKEKFEFPEPLLKEEAYITCKQAISDLPPLVDELGSEVST 216 Query: 60 GHQKRKENNKIAGKG-----FGYGLFFENSATTNTLS----ARYYKD 97 ++ + + + + + +S YKD Sbjct: 217 YCEEPETEYQRKMRKNCDVLYNHVAVNHKDFVKQVISQVPDGGNYKD 263 >gi|94968156|ref|YP_590204.1| DNA-cytosine methyltransferase [Candidatus Koribacter versatilis Ellin345] gi|94550206|gb|ABF40130.1| DNA-cytosine methyltransferase [Candidatus Koribacter versatilis Ellin345] Length = 359 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 M AC+FGVPQ R R+ + E F +P +GD+L + + + K W Sbjct: 184 MNACEFGVPQLRPRVVFVAMRKEYSEHFAWPRATNEPQTVGDVLFDLMSARGWKGVKAW 242 >gi|261839852|gb|ACX99617.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori 52] Length = 319 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q RERLYI+ F F FP L D L+ + +SN +++ Sbjct: 145 LNSADFQLAQNRERLYIVGFRKDLKHHFVFPLGLANDYCFKDFLDADNECYLDVSNAIFQ 204 Query: 60 -GHQKRKENNKIAGKG 74 R +N+++ + Sbjct: 205 RYLHNRYNHNQVSLEN 220 >gi|332075476|gb|EGI85945.1| modification methylase HpaII [Streptococcus pneumoniae GA41301] Length = 452 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 4/83 (4%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILE---EHIDDKSTISNK 56 + + DFGVPQ RER++II FP + + L+ KS +S K Sbjct: 148 LNSKDFGVPQNRERVFIIGHSRKKGTRLLFPFRREGQATNSETLKTLGNLNPSKSGMSGK 207 Query: 57 LWEGHQKRKENNKIAGKGFGYGL 79 ++ + G+GF + Sbjct: 208 VYYSEGLAPTLVRGKGEGFKIAI 230 >gi|219871000|ref|YP_002475375.1| cytosine specific DNA methyltransferase (BSP6IM) [Haemophilus parasuis SH0165] gi|219691204|gb|ACL32427.1| cytosine specific DNA methyltransferase (BSP6IM) [Haemophilus parasuis SH0165] Length = 295 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 38/116 (32%), Gaps = 17/116 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDIL---EEHIDDKSTISN 55 + + +GVPQ RER+Y + F+FPTP IK ++ + D+ + Sbjct: 121 LDSQFYGVPQMRERIYFVGIRKDIKHKPFEFPTPEPIKDIAECLIEERDYIFDENNPTFQ 180 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFFEN-------SATTNTLSAR-----YYKDGS 99 K + Y + + TL Y KDG Sbjct: 181 KYLHNKYNNNKVELNNILQKDYQVIDWRQSDFRCYEKKSPTLRTGRHGILYTKDGK 236 >gi|332673919|gb|AEE70736.1| C-5 cytosine-specific DNA methylase [Helicobacter pylori 83] Length = 319 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 4/90 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q+RERLYI+ F F FP L D L+ + + + Sbjct: 145 LNSADFQLAQKRERLYIVGFRKDLKHPFNFPLGLANDYCFKDFLDANNE---CYLDTNNA 201 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 Q+ N + F + + +T Sbjct: 202 AFQRYLHNQYNHNRVFLENILTLENVVLDT 231 >gi|317009733|gb|ADU80313.1| type II DNA modification enzyme [Helicobacter pylori India7] Length = 318 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 4/90 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q+RERLYI+ F F FP L D L+ + + Sbjct: 145 LNSADFQLAQKRERLYIVGFRKDLKHPFNFPLGLANDYCFNDFLDAGNE---CYLDVSNA 201 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 ++ N + F + +A +T Sbjct: 202 AFKRYLHNPYNHNRVFLENILTLENAVLDT 231 >gi|227500535|ref|ZP_03930589.1| possible DNA (cytosine-5-)-methyltransferase [Anaerococcus tetradius ATCC 35098] gi|227217363|gb|EEI82692.1| possible DNA (cytosine-5-)-methyltransferase [Anaerococcus tetradius ATCC 35098] Length = 321 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT-PLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++++ L + F F L + LE+ + + TI+ Sbjct: 151 LNAMDFGIPQKRERIFVVSCLGAN-NFSFDKLERKETRTLSEFLEKDVSELYTITQPYM- 208 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 K NK F L + T+S Sbjct: 209 ----LKFLNKGINNSFRGRLKVIKD-FSYTIS 235 >gi|42560766|ref|NP_975217.1| cytosine-specific DNA-methyltransferase Sau96I [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492262|emb|CAE76859.1| Cytosine-specific DNA-methyltransferase Sau96I [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320716|gb|ADK69359.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 341 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILEEHIDDK 50 + A D+ V Q+RERL +I N F+FP K L DIL+ + Sbjct: 155 LNALDYMVAQKRERLIVIGIRNDLTNLIKFEFPKKHQKKLVLKDILKNVPKSE 207 >gi|169826094|ref|YP_001696252.1| modification methylase BsuRI [Lysinibacillus sphaericus C3-41] gi|168990582|gb|ACA38122.1| Modification methylase BsuRI [Lysinibacillus sphaericus C3-41] Length = 426 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 7/58 (12%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV----EFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + DFGVPQ RER+++I + FK+P P +P GD L+ ++ + I + Sbjct: 228 NSRDFGVPQLRERVFLIGVHKEKIAEKYGFKYPKP---QPTHGDGLKPYVTLRDAIGD 282 >gi|212632918|ref|YP_002309443.1| site-specific DNA-methyltransferase [Shewanella piezotolerans WP3] gi|212554402|gb|ACJ26856.1| Site-specific DNA-methyltransferase (cytosine-specific) [Shewanella piezotolerans WP3] Length = 412 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 3/80 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 +KA + VPQ+RERL ++ S +F +P+P L D E+ S + Sbjct: 221 LKAIFYKVPQKRERLILVGVRKDLATSAKFSWPSPYKRIMTLKDAFEKGELFDSKVEESP 280 Query: 58 WEGHQKRKENNKIAGKGFGY 77 + + +RK+ GY Sbjct: 281 GQEYPQRKKEIMAQVPPGGY 300 >gi|217034658|ref|ZP_03440063.1| hypothetical protein HP9810_901g5 [Helicobacter pylori 98-10] gi|216942866|gb|EEC22357.1| hypothetical protein HP9810_901g5 [Helicobacter pylori 98-10] Length = 312 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 4/90 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q+RERLYI+ F F FP L D L+ D + Sbjct: 139 LNSADFQLAQKRERLYIVGFRKDLKHPFNFPLGLVNDYCFKDFLDA---DNECYLDTNNA 195 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 Q+ N + F + +A +T Sbjct: 196 AFQRYLRNKYNHNRVFLENILTLENAVLDT 225 >gi|308184861|ref|YP_003928994.1| type II DNA modification enzyme [Helicobacter pylori SJM180] gi|308060781|gb|ADO02677.1| type II DNA modification enzyme [Helicobacter pylori SJM180] Length = 318 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHID 48 + + DF + Q RERLYI+ F F FP L D L+ + Sbjct: 145 LNSADFQLAQNRERLYIVGFRKDLKYPFNFPLGLANDYCFNDFLDADNE 193 >gi|167042310|gb|ABZ07039.1| putative C-5 cytosine-specific DNA methylase [uncultured marine crenarchaeote HF4000_ANIW97J3] Length = 380 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 29/87 (33%), Gaps = 3/87 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+GVPQ R+R +I+ + P G + D + K+ +G Sbjct: 165 LNAADYGVPQIRKRAFIVGSRSRIP---IEKPRTTHGSNGQAPRVSVFDAISDLPKIPDG 221 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATT 87 + K F L T Sbjct: 222 SSSSRAAYKKPPNKFQRQLRNGQRKPT 248 >gi|212710423|ref|ZP_03318551.1| hypothetical protein PROVALCAL_01485 [Providencia alcalifaciens DSM 30120] gi|212686843|gb|EEB46371.1| hypothetical protein PROVALCAL_01485 [Providencia alcalifaciens DSM 30120] Length = 330 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPR 38 + A D+GV Q R+R+ + F + ++ + FP P+ R Sbjct: 145 LNAVDYGVAQDRKRVIFVGFRSDLNIPYTFPEPIEKDKR 183 >gi|325298662|ref|YP_004258579.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170] gi|324318215|gb|ADY36106.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170] Length = 336 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A D+ V + R+R++ I F +FK+PTPL KP L + + + D +K Sbjct: 144 LNANDYDVAEDRDRVFYIGFRKDLNIHDFKYPTPLKHKPTLRECIWDLQDTAIPARDK 201 >gi|227874220|ref|ZP_03992420.1| DNA (cytosine-5-)-methyltransferase [Oribacterium sinus F0268] gi|227839928|gb|EEJ50358.1| DNA (cytosine-5-)-methyltransferase [Oribacterium sinus F0268] Length = 336 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLN---PSVEFKFPTPLGIKPRLGDILEEHIDD 49 + A D+GV Q+RERL I ++++FP KP L DIL + Sbjct: 152 LNAWDYGVAQKRERLITIGIRKDLEDKIKYEFPKVYEYKPLLKDILLDVPPS 203 >gi|317014507|gb|ADU81943.1| type II DNA modification (methyltransferase) [Helicobacter pylori Gambia94/24] Length = 318 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 4/90 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q+RERLYI+ F F FP L D L+ D + Sbjct: 145 LNSADFQLAQKRERLYIVGFRKDLKHPFNFPLGLANDYCFKDFLDA---DNEYYLDVSNA 201 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 Q+ N + + +A +T Sbjct: 202 TFQRYLRNPYNHNRVSLENILTLENAVLDT 231 >gi|296313785|ref|ZP_06863726.1| modification methylase NgoPII [Neisseria polysaccharea ATCC 43768] gi|296839714|gb|EFH23652.1| modification methylase NgoPII [Neisseria polysaccharea ATCC 43768] Length = 330 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPT----PLGIKPRLGDILEEHID 48 A D+GV Q R+R++ I F ++F FPT K L DI+ + D Sbjct: 145 NAKDYGVAQERKRVFYIGFRKDLKIKFSFPTGSTVKDEDKITLKDIIWDLQD 196 >gi|313665138|ref|YP_004047009.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma leachii PG50] gi|312949950|gb|ADR24546.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma leachii PG50] Length = 342 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILEEHIDDK 50 + A D+ V Q+RERL +I N F+FP K L DIL+ + Sbjct: 155 LNALDYMVAQKRERLIVIGIRNDLTNLIKFEFPKKHQKKLVLKDILKNVPKSE 207 >gi|331703222|ref|YP_004399909.1| cytosine specific DNA methyltransferase Sau96I [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801777|emb|CBW53930.1| Cytosine specific DNA methyltransferase Sau96I [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 342 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILEEHIDDK 50 + A D+ V Q+RERL +I N F+FP K L DIL+ + Sbjct: 155 LNALDYMVAQKRERLIVIGIRNDLTNLIKFEFPKKHQKKLVLKDILKNVPKSE 207 >gi|309378580|emb|CBX22758.1| DNA cytosine methyltransferase M.NlaIV [Neisseria lactamica Y92-1009] Length = 380 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 3/79 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH-IDDKSTISNKLWE 59 + A DFG+PQ R+R+Y+ L + F P+L +ILE + S KL + Sbjct: 115 LNAKDFGIPQNRKRIYLTGSLKSKPDLSF--ETTPSPKLKNILESGLPTESSPFIKKLLK 172 Query: 60 GHQKRKENNKIAGKGFGYG 78 + K G Sbjct: 173 KFPPSELYGKSVKDKRGGK 191 >gi|308183225|ref|YP_003927352.1| type II DNA modification enzyme [Helicobacter pylori PeCan4] gi|308065410|gb|ADO07302.1| type II DNA modification enzyme [Helicobacter pylori PeCan4] Length = 318 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 4/90 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q+RERLYI+ F F FP L D L+ D + Sbjct: 145 LNSADFQLAQKRERLYIVGFRKDLKRPFNFPLGLANDYCFKDFLDA---DNECYLDVSNA 201 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 Q+ N + + +A +T Sbjct: 202 TFQRYLRNPYNHNRVSLENILTLENAVLDT 231 >gi|46019826|emb|CAE52348.1| putative cytosine-specific methyltransferase [Streptococcus thermophilus] Length = 365 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRL 39 + A D+GVPQ R+R++ + + FKFP P + Sbjct: 155 LLAADYGVPQIRKRMFFVGYRKDLNYEYFKFPEPTLTPDKH 195 >gi|321310707|ref|YP_004193036.1| C-5 cytosine-specific DNA methylase [Mycoplasma haemofelis str. Langford 1] gi|319802551|emb|CBY93197.1| C-5 cytosine-specific DNA methylase [Mycoplasma haemofelis str. Langford 1] Length = 340 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLGDILEEHIDD 49 + + D+GV Q+RERL +I + + FK+P KP L D+L + + Sbjct: 156 LNSWDYGVAQKRERLILIGIRSDFREKISFKYPKKHRYKPVLSDVLNDVPES 207 >gi|281416239|ref|YP_003347588.1| DNA cytosine methyltransferase [Enterococcus phage phiFL3A] gi|270209504|gb|ACZ64045.1| DNA cytosine methyltransferase [Enterococcus phage phiFL3A] gi|270209572|gb|ACZ64112.1| DNA cytosine methyltransferase [Enterococcus phage phiFL3B] Length = 317 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 6/94 (6%) Query: 1 MKACDFGVPQRRERLY-IIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+R+R++ I F +KP L + LE D K ++ Sbjct: 149 LNAMDFGIPQKRKRVFAISKLDGEPFNFDLLKHRPLKP-LRNFLEVTTDQKYLVTQPSM- 206 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 K +K + G T++ R Sbjct: 207 ---LSKIRSKSSLATGFSGRLEVVKEFVYTITTR 237 >gi|226223282|ref|YP_002757389.1| type II DNA modification enzyme (methyltransferase) [Listeria monocytogenes Clip81459] gi|225875744|emb|CAS04447.1| Putative type II DNA modification enzyme (methyltransferase) [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 389 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPT 31 + A FGVPQ RER++++ ++FP Sbjct: 169 LNAKHFGVPQNRERVFLLGIRKDLEIKQNWEFPE 202 >gi|91201234|emb|CAJ74294.1| similar to site-specific DNA-methyltransferase (cytosine-specific) [Candidatus Kuenenia stuttgartiensis] Length = 313 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 17/30 (56%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTP 32 A D+GVPQ RER++I+ F P P Sbjct: 162 AEDYGVPQTRERVFIVGTRPDVSRFTPPEP 191 >gi|317506898|ref|ZP_07964670.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC BAA-974] gi|316254826|gb|EFV14124.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC BAA-974] Length = 331 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A +FGVPQ R R ++ +F++P + P +G L + + +W Sbjct: 148 LNASEFGVPQLRPRFILVAMKRRDFRKFEWPRAISAPPTVGSALRPLMASRGWAGADIWA 207 Query: 60 G 60 Sbjct: 208 S 208 >gi|239627884|ref|ZP_04670915.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239518030|gb|EEQ57896.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 325 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTI 53 +KA D+G R+R+Y + F +F FP + D L + +D+ I Sbjct: 144 LKASDYGCATIRKRIYFVCFRKDLKAKFSFPESFESNIAVEDFLNQEVDEHYYI 197 >gi|312863775|ref|ZP_07724013.1| DNA (cytosine-5-)-methyltransferase [Streptococcus vestibularis F0396] gi|311101311|gb|EFQ59516.1| DNA (cytosine-5-)-methyltransferase [Streptococcus vestibularis F0396] Length = 454 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 29/83 (34%), Gaps = 3/83 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF VPQ RER++II F FP P + L ++ ++ Sbjct: 151 LNSKDFQVPQNRERVFIIGHSRRYRPRFLFPIRGENSPVNLERLGNVNPSGKGMNREV-- 208 Query: 60 GHQKRKENNKIAGKGFGYGLFFE 82 GKG G + Sbjct: 209 YLSSGLSPTLTRGKGEGTKIAIP 231 >gi|322372404|ref|ZP_08046940.1| modification methylase DdeI [Streptococcus sp. C150] gi|321277446|gb|EFX54515.1| modification methylase DdeI [Streptococcus sp. C150] Length = 387 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 32/101 (31%), Gaps = 11/101 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPT--PLGIKPRLGD------ILEEHIDD 49 + A DFGVPQ RER+++I E+ FP L + L D IL + Sbjct: 169 INAKDFGVPQNRERVFLIGVRKDLKIKSEWIFPEAMTLNNEITLRDAISDLPILGNNEQK 228 Query: 50 KSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTL 90 + I E + N L Sbjct: 229 YNYICEPRTEYQALLRGNQTELLNHVSRNHGERLQKIMRAL 269 >gi|254671396|emb|CBA08870.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis alpha153] Length = 157 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 3/79 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH-IDDKSTISNKLWE 59 + A DFG+PQ R+R+Y+ L + F P+L +ILE + S KL + Sbjct: 42 LNAKDFGIPQNRKRIYLTGSLKSKPDLSF--ETSPSPKLKNILESGLPTESSPFIKKLLK 99 Query: 60 GHQKRKENNKIAGKGFGYG 78 + K G Sbjct: 100 KFPPSELYGKSVKDKRGGK 118 >gi|15645735|ref|NP_207912.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter pylori 26695] gi|2314272|gb|AAD08164.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter pylori 26695] Length = 312 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHID 48 + + DF + Q RERLYI+ F F FP L D L+ + Sbjct: 139 LNSADFQLAQNRERLYIVGFRKDLKHPFNFPLGLANDYYFKDFLDADNE 187 >gi|294635767|ref|ZP_06714227.1| C-5 cytosine-specific DNA methylase family protein [Edwardsiella tarda ATCC 23685] gi|291090867|gb|EFE23428.1| C-5 cytosine-specific DNA methylase family protein [Edwardsiella tarda ATCC 23685] Length = 403 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 12/98 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDILEEHIDDKSTIS---- 54 + A D+GVPQ R+R +I+ + F++P P + G Sbjct: 160 LNARDYGVPQSRKRAFILAVRKDICTDGFEWP-PKATHTKSGSRAWATSSTVFERPPQSV 218 Query: 55 -----NKLWEGHQKRKENNKIAGKGFGYGLFFENSATT 87 ++L E E+ + K +G +++ Sbjct: 219 LIELKDRLIEKFDFTMEDAETCIKSLNWGQPVDSNDPC 256 >gi|317180853|dbj|BAJ58639.1| Type II DNA modification enzyme [Helicobacter pylori F32] Length = 312 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 4/90 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q+RERLYI+ F F FP L D L+ D + Sbjct: 139 LNSADFQLAQKRERLYIVGFRKDLKHPFNFPLGLANDYCFKDFLDA---DNECYLDTNNA 195 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 Q+ N + F + +A +T Sbjct: 196 AFQRYLHNKYNHNRVFLENILTLENAVLDT 225 >gi|281181375|dbj|BAI57705.1| cytosine specific DNA methyltransferase [Escherichia coli SE15] gi|315288374|gb|EFU47772.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 110-3] Length = 398 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 7/48 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNP------SVEFKFPTPLGIKPRLGDI 42 + A D+GVPQ R+R++I N ++EF P P ++ Sbjct: 159 LNARDYGVPQNRKRVFIAGVRNDILKKRNNIEFP-PQATHFNPNSNEV 205 >gi|257466246|ref|ZP_05630557.1| Type II restriction-modification system methylation subunit [Fusobacterium gonidiaformans ATCC 25563] Length = 327 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 33/91 (36%), Gaps = 5/91 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFG+PQ+RER++++ L + F F + R DI E D S + E Sbjct: 161 LNAMDFGIPQKRERIFVVSIL-GNNSFDFAKLEKTQTR--DISEFIEKDASNLYEVRQES 217 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 G T+S Sbjct: 218 MLSHIRGEPKNNNFRGRLKVI--DKFAYTIS 246 >gi|208434021|ref|YP_002265687.1| cytosine specific DNA methyltransferase (putative type II) [Helicobacter pylori G27] gi|208431950|gb|ACI26821.1| cytosine specific DNA methyltransferase (putative type II) [Helicobacter pylori G27] Length = 281 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + D+GVPQ RER +I+ S +FK P Sbjct: 79 LNVKDYGVPQNRERAFIVGASRFSFDFKLLEPSQS 113 >gi|109947180|ref|YP_664408.1| C-5 cytosine-specific DNA methylase [Helicobacter acinonychis str. Sheeba] gi|109714401|emb|CAJ99409.1| C-5 cytosine-specific DNA methylase [Helicobacter acinonychis str. Sheeba] Length = 315 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 4/90 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q+RERLYI+ F +F FP L D L+ D N Sbjct: 139 LNSADFQLAQKRERLYIVGFRKDLKHQFNFPLGLANDYCFKDFLDA---DNECYLNTNNA 195 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 Q+ N+ + F + +A +T Sbjct: 196 AFQRYLHNSYNHNRVFLENILTLENAVLDT 225 >gi|332970700|gb|EGK09681.1| modification methylase DdeIM [Kingella kingae ATCC 23330] Length = 193 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 31/87 (35%), Gaps = 4/87 (4%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPL-GIKPRLGDILEEHIDDKSTISNKL-WEG 60 A DFGVPQ R R + + F N + F+FP + + D G Sbjct: 2 ASDFGVPQNRRRAFFVGFKNGT-RFEFPQATVKQHITAEQAISDLPDYSVADGENYPLSG 60 Query: 61 HQKRKENNKIAGKG-FGYGLFFENSAT 86 ++ + G F + + N T Sbjct: 61 SSNYQQQMRQNSTGLFNHQITVHNDKT 87 >gi|227484740|ref|ZP_03915056.1| possible DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC 51172] gi|227237262|gb|EEI87277.1| possible DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC 51172] Length = 321 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++++ L + F F + R + LE+ + + T++ Sbjct: 151 LNAMDFGIPQKRERIFVVSCLGAN-NFSFNKLERKETRPLSEFLEKDVSELYTMTQPYM- 208 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 K NK F L + T+S Sbjct: 209 ----LKFLNKGIDNSFRGRLKVIKD-YSYTIS 235 >gi|260890952|ref|ZP_05902215.1| modification methylase NgoFVII [Leptotrichia hofstadii F0254] gi|260859505|gb|EEX74005.1| modification methylase NgoFVII [Leptotrichia hofstadii F0254] Length = 452 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 36/127 (28%), Gaps = 28/127 (22%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDK--------ST 52 + A D+GVPQ+RER+ I+ +P G+ D+K Sbjct: 154 LNAADYGVPQQRERVIIMGNRLGLKN-PYPKKTHADLFPGEENYLLFDEKLKGTNLKPYI 212 Query: 53 ISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA-------------------R 93 + + N G + NT R Sbjct: 213 TVEQTIGFLSEIDVQNDKLNDFVKVGKRKIYNHIANTSVKDTFWGRKHEVNQADICDYLR 272 Query: 94 YYKDGSE 100 YY+D SE Sbjct: 273 YYRDKSE 279 >gi|94995093|ref|YP_603191.1| Type II restriction-modification system methylation subunit [Streptococcus pyogenes MGAS10750] gi|94548601|gb|ABF38647.1| Type II restriction-modification system methylation subunit [Streptococcus pyogenes MGAS10750] Length = 321 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++++ L + F F + R + LE+++ + T++ Sbjct: 151 LNAMDFGIPQKRERIFVVSCLGAN-NFSFDKLERKETRPLSEFLEKNVSELYTMTQPYM- 208 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 K NK F L + T+S Sbjct: 209 ----LKFLNKGINNSFRGRLKVIKD-FSYTIS 235 >gi|326563801|gb|EGE14052.1| type II DNA modification enzyme [Moraxella catarrhalis 46P47B1] gi|326566814|gb|EGE16953.1| type II DNA modification enzyme [Moraxella catarrhalis 103P14B1] gi|326576727|gb|EGE26634.1| type II DNA modification enzyme [Moraxella catarrhalis 101P30B1] Length = 327 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + + +GVPQ R+R+Y + FKFP P+ + + D L + D + ++N + Sbjct: 144 LDSQYYGVPQMRQRVYFVGIRKDIKHMPFKFPQPI-LSKPIDDFLSDDRDYEFDVNNPTF 202 Query: 59 EGHQKRK 65 + + K Sbjct: 203 QKYLASK 209 >gi|322385307|ref|ZP_08058952.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus cristatus ATCC 51100] gi|321270566|gb|EFX53481.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus cristatus ATCC 51100] Length = 480 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 4/83 (4%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGD---ILEEHIDDKSTISNK 56 + + +FGVPQ RER++II FP + + IL KS +S K Sbjct: 176 LNSKNFGVPQNRERVFIIGHSRKRGTRLLFPFRREGQATNSETLKILGNLNPSKSGMSGK 235 Query: 57 LWEGHQKRKENNKIAGKGFGYGL 79 ++ + G+GF + Sbjct: 236 VYYSEGLAPTLVRGKGEGFKVAI 258 >gi|54297036|ref|YP_123405.1| hypothetical protein lpp1078 [Legionella pneumophila str. Paris] gi|53750821|emb|CAH12229.1| hypothetical protein lpp1078 [Legionella pneumophila str. Paris] Length = 320 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL--EEHIDDKSTISNKLW 58 + + DFGVPQ+RER YI+ F+ +V F+FP G+ L IL E+ I +K S+ Sbjct: 146 LNSLDFGVPQKRERTYIVGFI-DNVPFEFPKG-GVPFNLESILEKEQQIPNKYYASD--- 200 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTL 90 ++++ S +TL Sbjct: 201 -YIRQKRIAALKGVPPIPSIWHENKSGNISTL 231 >gi|326560963|gb|EGE11328.1| type II DNA modification enzyme [Moraxella catarrhalis 7169] gi|326575187|gb|EGE25115.1| type II DNA modification enzyme [Moraxella catarrhalis CO72] Length = 322 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + + +GVPQ R+R+Y + FKFP P+ + + D L + D + ++N + Sbjct: 139 LDSQYYGVPQMRQRVYFVGIRKDIKHMPFKFPQPI-LSKPIDDFLSDDRDYEFDVNNPTF 197 Query: 59 EGHQKRK 65 + + K Sbjct: 198 QKYLASK 204 >gi|322411818|gb|EFY02726.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 451 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 3/83 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + +F VPQ RER++II F FP + L + ++ K+ Sbjct: 148 LNSKNFQVPQNRERIFIIGHSRRYRPRFLFPLGRESSSTGLERLGNVNPSGNGMNGKV-- 205 Query: 60 GHQKRKENNKIAGKGFGYGLFFE 82 GKG G + Sbjct: 206 YLSSGLAPTLTRGKGEGTKIAIP 228 >gi|320333452|ref|YP_004170163.1| DNA-cytosine methyltransferase [Deinococcus maricopensis DSM 21211] gi|319754741|gb|ADV66498.1| DNA-cytosine methyltransferase [Deinococcus maricopensis DSM 21211] Length = 326 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTP-LGIKPRLGDIL 43 + A D+GVPQ R R+ ++ ++ +P P P +G+ L Sbjct: 149 LNARDYGVPQLRPRVILVALRPDVMAQYSWPEPHPEAAPTVGEAL 193 >gi|46580156|ref|YP_010964.1| C-5 cytosine-specific DNA methylase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|46449573|gb|AAS96223.1| C-5 cytosine-specific DNA methylase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|311233853|gb|ADP86707.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1] Length = 369 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT-PLGIKP 37 + A D+GVPQ R+R++I+ +P P P Sbjct: 168 LNARDYGVPQNRKRVFILGTAGGHTLPDWPPRPTHFAP 205 >gi|119511452|ref|ZP_01630563.1| modification methylase NlaIV [Nodularia spumigena CCY9414] gi|119463917|gb|EAW44843.1| modification methylase NlaIV [Nodularia spumigena CCY9414] Length = 433 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 19/93 (20%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF-----PT--------------PLGIKPRLGD 41 + + +FG+PQ R R+Y+I LN + +F P + D Sbjct: 148 LNSANFGLPQNRVRIYLIGILNATPKFNLMSDVGPKDSHTYNPQQMSLFHKPKRPATVAD 207 Query: 42 ILEEHIDDKSTISNKLWEGHQKRKENNKIAGKG 74 ILE++ K S ++ ++ G Sbjct: 208 ILEDNPSSKYDCSPPFINALKRIFNDDLNRLHG 240 >gi|289167785|ref|YP_003446054.1| site-specific DNA methylase [Streptococcus mitis B6] gi|288907352|emb|CBJ22189.1| site-specific DNA methylase [Streptococcus mitis B6] Length = 351 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 7/95 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+GVPQ R+R+ + N EF++P LG + + ++ + Sbjct: 152 LLASDYGVPQNRKRVIFVGTRND--EFEYPEALGTIITTEMAISDLPTLENELGEIEMSY 209 Query: 61 HQKR-----KENNKIAGKGFGYGLFFENSATTNTL 90 + K K + + + +T+ Sbjct: 210 VSEPQNDYQKLMRKRSNVVLNHVAAKHSEKVISTI 244 >gi|260579295|ref|ZP_05847178.1| modification methylase NaeI (cytosine-specificmethyltransferase NaeI) (M.NaeI) [Corynebacterium jeikeium ATCC 43734] gi|258602594|gb|EEW15888.1| modification methylase NaeI (cytosine-specificmethyltransferase NaeI) (M.NaeI) [Corynebacterium jeikeium ATCC 43734] Length = 372 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 A DFGVPQ R R ++ P + F +P PL + +G+ L + + W Sbjct: 180 AADFGVPQLRPRFVLVALREPYADYFAWPEPLDTRVTVGEALHSLMAENGWPGADAWA 237 >gi|68536951|ref|YP_251655.1| putative DNA restriction-modification system, DNA methylase [Corynebacterium jeikeium K411] gi|68264550|emb|CAI38038.1| putative DNA restriction-modification system, DNA methylase [Corynebacterium jeikeium K411] Length = 341 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 A DFGVPQ R R ++ P + F +P PL + +G+ L + + W Sbjct: 149 AADFGVPQLRPRFVLVALREPYADYFAWPEPLDTRVTVGEALHSLMAENGWPGADAWA 206 >gi|294787738|ref|ZP_06752982.1| modification methylase NgoPII [Simonsiella muelleri ATCC 29453] gi|294484031|gb|EFG31714.1| modification methylase NgoPII [Simonsiella muelleri ATCC 29453] Length = 331 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 3/80 (3%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 A ++GV Q R+R++ I F +++F+FP + L++ + D + E Sbjct: 145 NAKNYGVAQERKRVFYIGFRKDLNIKFQFPQGSTADDKHKLTLKDVMADLQKTAVPASE- 203 Query: 61 HQKRKENNKIAGKGFGYGLF 80 + I + G F Sbjct: 204 -KNYANPQAINNNEYFTGSF 222 >gi|326567346|gb|EGE17461.1| type II DNA modification enzyme [Moraxella catarrhalis BC1] Length = 327 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + + +GVPQ R+R+Y + FKFP P+ + + D L + D + ++N + Sbjct: 144 LDSQYYGVPQMRQRVYFVGIRKDIKHMPFKFPQPI-LSKPIDDFLSDDRDYEFDVNNPTF 202 Query: 59 EGHQKRK 65 + + K Sbjct: 203 QKYLASK 209 >gi|332361999|gb|EGJ39801.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus sanguinis SK49] Length = 480 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEE 45 + + DFGVPQ RER++II FP + + L+E Sbjct: 176 LNSKDFGVPQNRERVFIIGHSRKKGTRLLFPFRREGQATNSETLKE 221 >gi|291320302|ref|YP_003515564.1| cytosine specific methyltransferase [Mycoplasma agalactiae] gi|290752635|emb|CBH40608.1| Cytosine specific methyltransferase [Mycoplasma agalactiae] Length = 339 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 15/100 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A D+ V Q+RERL +I N V F FPT K L DIL + + Sbjct: 153 LNALDYNVAQKRERLIVIGIRNDIVNKIKFSFPTKSKNKLVLKDILLDVPKSEGA----- 207 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKD 97 + + +++ K+ G + +S Y K Sbjct: 208 -KYSKAKEDIFKLVPPGGCWKDIDPK------ISKEYMKS 240 >gi|227485931|ref|ZP_03916247.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC 51172] gi|227235976|gb|EEI85991.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC 51172] Length = 318 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 4/77 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK----FPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A ++G+PQ R R Y + E FP ++ L D+++ + IS Sbjct: 142 LNAKNYGIPQNRNRWYCVGVDKNHKELNLDDVFPGICELRYTLKDVIDCEYKEDYQISQI 201 Query: 57 LWEGHQKRKENNKIAGK 73 +K + Sbjct: 202 ARNNIEKHIGLYLEKNQ 218 >gi|256544753|ref|ZP_05472125.1| type II restriction-modification system methylation subunit [Anaerococcus vaginalis ATCC 51170] gi|256399642|gb|EEU13247.1| type II restriction-modification system methylation subunit [Anaerococcus vaginalis ATCC 51170] Length = 320 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++++ L + F F + R D LE+ + + T++ Sbjct: 151 LNAMDFGIPQKRERIFVVSCLGAN-NFSFNKLERKETRPLSDFLEKDVSELYTMTQPYM- 208 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 K NK F L + T+S Sbjct: 209 ----LKFLNKGIDNSFRGRLKVIKD-FSYTIS 235 >gi|119493084|ref|ZP_01624009.1| C-5 cytosine-specific DNA methylase [Lyngbya sp. PCC 8106] gi|119452829|gb|EAW34004.1| C-5 cytosine-specific DNA methylase [Lyngbya sp. PCC 8106] Length = 441 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 19/37 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 + A +GVPQ+RERL+++ +P P P Sbjct: 165 LNAAYYGVPQKRERLFLLGCREDLALPNYPEPTFQPP 201 >gi|316984658|gb|EFV63622.1| modification methylase NlaIV [Neisseria meningitidis H44/76] Length = 171 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 3/79 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH-IDDKSTISNKLWE 59 + A DFG+PQ R+R+Y+ L + F P+L +ILE + S KL + Sbjct: 56 LNAKDFGIPQNRKRIYLTGSLKSKPDLSF--ETSPSPKLKNILESGLPTESSPFIKKLLK 113 Query: 60 GHQKRKENNKIAGKGFGYG 78 + K G Sbjct: 114 KFPPSELYGKSVKDKRGGK 132 >gi|315917403|ref|ZP_07913643.1| type II restriction-modification system methylation subunit [Fusobacterium gonidiaformans ATCC 25563] gi|313691278|gb|EFS28113.1| type II restriction-modification system methylation subunit [Fusobacterium gonidiaformans ATCC 25563] Length = 320 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 33/91 (36%), Gaps = 5/91 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFG+PQ+RER++++ L + F F + R DI E D S + E Sbjct: 154 LNAMDFGIPQKRERIFVVSIL-GNNSFDFAKLEKTQTR--DISEFIEKDASNLYEVRQES 210 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 G T+S Sbjct: 211 MLSHIRGEPKNNNFRGRLKVI--DKFAYTIS 239 >gi|319745928|gb|EFV98213.1| type II DNA modification methyltransferase [Streptococcus agalactiae ATCC 13813] Length = 454 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 3/83 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + +F VPQ RER++II F FP + L + ++ K+ Sbjct: 151 LNSKNFQVPQNRERIFIIGHSRRYRPRFLFPLGRESSSTGLERLGNVNPSGNGMNGKV-- 208 Query: 60 GHQKRKENNKIAGKGFGYGLFFE 82 GKG G + Sbjct: 209 YLSSGLAPTLTRGKGEGTKIAIP 231 >gi|317012898|gb|ADU83506.1| type II DNA modification enzyme [Helicobacter pylori Lithuania75] Length = 318 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 4/90 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q+RERLYI+ F F FP L D L+ D + Sbjct: 145 LNSADFQLAQKRERLYIVGFRKDLKHHFVFPLGLANDYCFKDFLDA---DNECYLDVSNA 201 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 Q+ N + F + +A +T Sbjct: 202 IFQRYLHNPYNHNRVFLENILTLENAVLDT 231 >gi|417325|sp|P15840|MTSI_SPISQ RecName: Full=CPG DNA methylase; AltName: Full=Cytosine-specific methyltransferase SssI; Short=M.SssI gi|66468|pir||CTYMCS site-specific DNA-methyltransferase (cytosine-specific) (EC 2.1.1.73) SssI - Spiroplasma sp. (strain MQ1) gi|47553|emb|CAA35058.1| unnamed protein product [Spiroplasma sp.] Length = 386 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 16/115 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFG Q R R+++I LN V + P + +L + + +K ++N L Sbjct: 219 LNAADFGSSQARRRVFMISTLNEFV--ELPKGDKKPKSIKKVLNKIVSEKDILNNLLKYN 276 Query: 61 HQKRKENNKIAG--------KGFGYGLFFENSATTNTLSARYY------KDGSEI 101 + K+ K G ++ T TL+A KDGS I Sbjct: 277 LTEFKKTKSNINKASLIGYSKFNSEGYVYDPEFTGPTLTASGANSRIKIKDGSNI 331 >gi|317178577|dbj|BAJ56365.1| Type II DNA modification enzyme [Helicobacter pylori F30] Length = 318 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 4/90 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q+RERLYI+ F F FP L D L+ + + Sbjct: 145 LNSADFQLAQKRERLYIVGFRKDLKHPFNFPLGLANDYYFEDFLDAGNE---CYLDTNNN 201 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 Q+ N + F + +A +T Sbjct: 202 AFQRYLHNQYNHNRIFLENILTLENAVLDT 231 >gi|169823586|ref|YP_001691089.1| cytosine-specific methyltransferase [Finegoldia magna ATCC 29328] gi|167832206|dbj|BAG09121.1| cytosine-specific methyltransferase [Finegoldia magna ATCC 29328] Length = 330 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 1/57 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A D+GV Q R+R++ + F F P + + D K T L Sbjct: 142 LNASDYGVAQDRKRIFYVGFRKDL-NICFDNPPKKFNYKPTLKDAIYDLKDTAIPSL 197 >gi|169824652|ref|YP_001692263.1| cytosine-specific DNA-methyltransferase [Finegoldia magna ATCC 29328] gi|297588631|ref|ZP_06947274.1| type II restriction-modification system methylation subunit [Finegoldia magna ATCC 53516] gi|304440076|ref|ZP_07399968.1| type II restriction-modification system methylation subunit [Peptoniphilus duerdenii ATCC BAA-1640] gi|167831457|dbj|BAG08373.1| cytosine-specific DNA-methyltransferase [Finegoldia magna ATCC 29328] gi|297574004|gb|EFH92725.1| type II restriction-modification system methylation subunit [Finegoldia magna ATCC 53516] gi|304371443|gb|EFM25057.1| type II restriction-modification system methylation subunit [Peptoniphilus duerdenii ATCC BAA-1640] Length = 320 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 39/92 (42%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++++ L + F F + R + LE+ + + T++ Sbjct: 151 LNAMDFGIPQKRERIFVVSCLGAN-NFSFNKLERKETRPLSEFLEKDVSELYTMTQPYML 209 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + + F L + T+S Sbjct: 210 KFLNKSID-----NSFRGRLKVIKD-FSYTIS 235 >gi|71274663|ref|ZP_00650951.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Dixon] gi|71899625|ref|ZP_00681779.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Ann-1] gi|71164395|gb|EAO14109.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Dixon] gi|71730577|gb|EAO32654.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Ann-1] Length = 329 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 2/59 (3%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV-EFKFPTP-LGIKPRLGDILEEHIDDKSTISNKLW 58 A D+GV Q R R+ + F +P P P +G++L + + W Sbjct: 157 NASDYGVSQLRPRVVFVGIRKDLASGFAWPEPLQNAPPTVGELLHDLMAANGWRGADRW 215 >gi|313890914|ref|ZP_07824537.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pseudoporcinus SPIN 20026] gi|313120711|gb|EFR43827.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pseudoporcinus SPIN 20026] Length = 316 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++++ L + F F + R D LE+ + + T++ Sbjct: 151 LNAMDFGIPQKRERIFVVSCLGAN-NFSFNKLERKETRPLSDFLEKDVSELYTMTQPYM- 208 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 K NK F L T T+S Sbjct: 209 ----LKFLNKGIDNSFRGRLKVIKD-FTYTIS 235 >gi|309789600|ref|ZP_07684181.1| BsaWI methylase [Oscillochloris trichoides DG6] gi|308228336|gb|EFO81983.1| BsaWI methylase [Oscillochloris trichoides DG6] Length = 436 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDD 49 + A ++GVPQ RERL+II + S+ FPTP +L + ++D Sbjct: 173 LNAANYGVPQFRERLFIIATSDSSLPIIFPTPTHGYTKL--LPWNTVED 219 >gi|208435018|ref|YP_002266684.1| type II DNA modification enzyme [Helicobacter pylori G27] gi|208432947|gb|ACI27818.1| type II DNA modification enzyme [Helicobacter pylori G27] Length = 318 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHID 48 + + DF + Q+RERLYI+ F F FP L D L+ + Sbjct: 145 LNSADFQLAQKRERLYIVGFRKDLKHPFNFPLGLANDYCFKDFLDADNE 193 >gi|326779115|ref|ZP_08238380.1| DNA-cytosine methyltransferase [Streptomyces cf. griseus XylebKG-1] gi|326659448|gb|EGE44294.1| DNA-cytosine methyltransferase [Streptomyces cf. griseus XylebKG-1] Length = 433 Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 5/103 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 ++A DFGVPQ R R ++ ++F +PTP+G + D LE+ ++ + + Sbjct: 197 LEASDFGVPQLRPRAVLVAIRADVLGDIKFVWPTPVGGVYSVFDALEKSMEARYEPYISM 256 Query: 58 WEGHQKRKENNKIA--GKGFGYGLFFENSATTNTLSARYYKDG 98 K + + L ++ TL K G Sbjct: 257 GGKIGKIASESLSRWVREASRAALEKKDGGIAPTLVGGSKKHG 299 >gi|260886138|ref|ZP_05736578.2| modification methylase EcoRII [Prevotella tannerae ATCC 51259] gi|260850757|gb|EEX70626.1| modification methylase EcoRII [Prevotella tannerae ATCC 51259] Length = 427 Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A DFGVPQ RER+ II L F KP L D L+E D + ++ Sbjct: 247 LNAADFGVPQNRERIIIIGSLKQPFVFSRLVKQPRKP-LVDFLDESGDFEYLDPSEY 302 >gi|254368946|ref|ZP_04984959.1| modification methylase FnuDI [Francisella tularensis subsp. holarctica FSC022] gi|157121867|gb|EDO66037.1| modification methylase FnuDI [Francisella tularensis subsp. holarctica FSC022] Length = 220 Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDD 49 + + DF VPQ R+R++ + F F T K L D + + + Sbjct: 29 LNSSDFKVPQDRQRVFFVGIRKDLGFNFNFSTNTYPKITLKDAIWDLRES 78 >gi|254779672|ref|YP_003057778.1| M.HpyAVIII, a type II cytosine specific DNA methyltransferase [Helicobacter pylori B38] gi|254001584|emb|CAX29633.1| M.HpyAVIII, a type II cytosine specific DNA methyltransferase [Helicobacter pylori B38] Length = 318 Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHID 48 + + DF + Q+RERLYI+ F F FP L D L+ + Sbjct: 145 LNSADFQLAQKRERLYIVGFRKDLKHPFNFPLGLANDYCFNDFLDADNE 193 >gi|169544173|ref|YP_001692948.1| methylase [Yersinia enterocolitica] gi|168218357|emb|CAP20100.1| methylase [Yersinia enterocolitica] Length = 481 Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 15/106 (14%) Query: 1 MKACDFGVPQRRERLYIID----------FLNPSVEFKFPTPLGIKPRLGDILEEHIDDK 50 + + D+G + R+R+ +I + + + F L DI E DD Sbjct: 298 IDSRDYGSIEERKRMLVIGVSVGLTNVVSYFDDEIAF---YKKECIQTLNDIFEPIADDH 354 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 + + ++ + AGKGF L ++ T+ Y+K Sbjct: 355 TAWKE--YSYLADKEIRDLKAGKGFKRQLLTGDNNKCGTIGRGYHK 398 >gi|254285523|ref|ZP_04960487.1| modification methylase Eco47II [Vibrio cholerae AM-19226] gi|150424385|gb|EDN16322.1| modification methylase Eco47II [Vibrio cholerae AM-19226] Length = 417 Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 3/80 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 +KA + VPQ+RERL ++ V+F +P+P L D + + Sbjct: 222 LKAIFYKVPQKRERLILVGIRKDLAQKVKFHWPSPYKRVMTLRDAFYAGELYTTDVPKSD 281 Query: 58 WEGHQKRKENNKIAGKGFGY 77 + + +RK+ GY Sbjct: 282 GQSYPQRKKEILSEVPQGGY 301 >gi|227503804|ref|ZP_03933853.1| DNA restriction-modification system, DNA methylase [Corynebacterium striatum ATCC 6940] gi|227199628|gb|EEI79676.1| DNA restriction-modification system, DNA methylase [Corynebacterium striatum ATCC 6940] Length = 455 Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 ++A D+GVPQ R R ++ N F +P + +G L + + + W Sbjct: 264 LQAADYGVPQLRPRFILVALKNEFANYFAWPKVVKSHTPVGTALLPLMAENGWPGAEAWA 323 >gi|60202518|gb|AAX14650.1| BbvCI methyltransferase 1 [Brevibacillus brevis] Length = 429 Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLN-PSVEFKFPTPLG 34 + A +FGVPQ RERL I + F +P P Sbjct: 170 LNAANFGVPQFRERLIIAAVCKSEANNFFWPEPTH 204 >gi|67925212|ref|ZP_00518579.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] gi|67852948|gb|EAM48340.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] Length = 417 Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 8/74 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A FGVPQ+R+R++I+ V +F P P + + S +L Sbjct: 225 LSAASFGVPQKRDRIFIVGLKKDQVSKQFIIPKPTH------NFAHLLPSKNNYNSKQLS 278 Query: 59 EGHQKRKENNKIAG 72 H EN Sbjct: 279 LFHSFSSENQDHNL 292 >gi|237703954|ref|ZP_04534435.1| DNA-cytosine methyltransferase [Escherichia sp. 3_2_53FAA] gi|226901866|gb|EEH88125.1| DNA-cytosine methyltransferase [Escherichia sp. 3_2_53FAA] Length = 367 Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 7/48 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNP------SVEFKFPTPLGIKPRLGDI 42 + A D+GVPQ R+R++I N ++EF P P ++ Sbjct: 128 LNARDYGVPQNRKRVFIAGVRNDILKKRNNIEFP-PQATHFNPNSNEV 174 >gi|291566149|dbj|BAI88421.1| type II DNA modification methyltransferase [Arthrospira platensis NIES-39] Length = 379 Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 4/57 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A ++G+PQRRER++I+ E+ FP L +L +N Sbjct: 171 LDAENYGIPQRRERVFIVGVREDWQREWSFPQESH---SLESLLWSQYVSFDYWNNH 224 >gi|284052085|ref|ZP_06382295.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca] Length = 382 Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 4/57 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A ++G+PQRRER++I+ E+ FP L +L +N Sbjct: 174 LDAENYGIPQRRERVFIVGVREDWQREWSFPQESH---SLESLLWSQYVSFDYWNNH 227 >gi|127447|sp|P25266|MTE1_HERAU RecName: Full=Modification methylase HgiEI; Short=M.HgiEI; AltName: Full=Cytosine-specific methyltransferase HgiEI gi|43471|emb|CAA38944.1| methyltransferase [Herpetosiphon aurantiacus] Length = 437 Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 1 MKACDFGVPQRRERLYIIDF--LNPSVEFKFPTPLGIKPRLGDILEE 45 + + DFGV Q R+R++I+ F FP RL IL+ Sbjct: 146 LNSFDFGVAQNRDRVFIVGIQQKLDLNGFSFPEYAESDQRLYHILDN 192 >gi|300791025|ref|YP_003771316.1| DNA (cytosine-5-)-methyltransferase [Amycolatopsis mediterranei U32] gi|299800539|gb|ADJ50914.1| DNA (cytosine-5-)-methyltransferase [Amycolatopsis mediterranei U32] Length = 435 Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 7/71 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + ACDFGVPQ R R ++ + FK+P P+ + + + + + WE Sbjct: 163 LNACDFGVPQLRPRFVLVAMQEDDAKYFKWPEPVAKQLTVSAAIHDL------MGANGWE 216 Query: 60 GHQKRKENNKI 70 G ++ ++ Sbjct: 217 GLEQWMKDADK 227 >gi|238786362|ref|ZP_04630295.1| Methylase [Yersinia bercovieri ATCC 43970] gi|238712733|gb|EEQ04812.1| Methylase [Yersinia bercovieri ATCC 43970] Length = 466 Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 15/106 (14%) Query: 1 MKACDFGVPQRRERLYIID----------FLNPSVEFKFPTPLGIKPRLGDILEEHIDDK 50 + + D+G + R+R+ +I + + + F L DI E DD Sbjct: 283 IDSRDYGSIEERKRMLVIGVSVGLTNVVSYFDDEIAF---YKKECIQTLNDIFEPIADDH 339 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 + + ++ + AGKGF L ++ T+ Y+K Sbjct: 340 TAWKE--YSYLADKEIRDLKAGKGFKRQLLTGDNNKCGTIGRGYHK 383 >gi|307152624|ref|YP_003888008.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] gi|306982852|gb|ADN14733.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] Length = 708 Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 39/99 (39%), Gaps = 14/99 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL------GDILEEHIDDKSTIS 54 + A D+GVPQRR+RL+ + +K+P + G++ ++ Sbjct: 169 LNASDYGVPQRRQRLFCVAH---QSVWKWPAQTHLHHPYTAGEALGELALIVPAKAKFLT 225 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + Q+ + +K + +A + T++ R Sbjct: 226 LSQDQYIQRYEAASKCINPRDIH-----LNAPSRTVTCR 259 >gi|288801979|ref|ZP_06407420.1| modification methylase HaeIII (Cytosine-specific methyltransferase HaeIII) [Prevotella melaninogenica D18] gi|288335414|gb|EFC73848.1| modification methylase HaeIII (Cytosine-specific methyltransferase HaeIII) [Prevotella melaninogenica D18] Length = 336 Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 17/88 (19%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A DF VP+ R R++ I F ++++P P KP L + + + Sbjct: 144 LNANDFDVPEDRNRVFYIGFRKDLHINDYEYPLPQKHKPTLREAIWD------------- 190 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSAT 86 Q+ + G N+ Sbjct: 191 --LQETAIPAREKNHTNGDACIVPNNEY 216 >gi|325285907|ref|YP_004261697.1| DNA-cytosine methyltransferase [Cellulophaga lytica DSM 7489] gi|324321361|gb|ADY28826.1| DNA-cytosine methyltransferase [Cellulophaga lytica DSM 7489] Length = 414 Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDIL 43 +KA ++ VPQ+RER+ ++ +++++P P L D L Sbjct: 219 LKAINYKVPQKRERVILVGVRKDIDIKYEYPKPHNKIYNLIDAL 262 >gi|268589649|ref|ZP_06123870.1| modification methylase Eco47II [Providencia rettgeri DSM 1131] gi|291314961|gb|EFE55414.1| modification methylase Eco47II [Providencia rettgeri DSM 1131] Length = 424 Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 3/101 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 +KA + VPQ+RERL ++ V + +P+P + D L+ + + Sbjct: 219 LKAIFYQVPQKRERLILVAIRKDLVNSIKYDWPSPYHKVMTMRDALKAGELFDTDVPKSD 278 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 + + KRK+ GY + YY G Sbjct: 279 GQKYPKRKQEILSLVPQGGYWRDLPEELQKEYMQKSYYLGG 319 >gi|297380299|gb|ADI35186.1| DNA-cytosine methyltransferase [Helicobacter pylori v225d] Length = 264 Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHID 48 + + DF + Q+RERLYI+ F F FP L D L+ + Sbjct: 91 LNSADFQLAQKRERLYIVGFRKDLKHPFDFPLGLANDYCFKDFLDADNE 139 >gi|168207191|ref|ZP_02633196.1| modification methylase ScrFIB [Clostridium perfringens E str. JGS1987] gi|170661387|gb|EDT14070.1| modification methylase ScrFIB [Clostridium perfringens E str. JGS1987] Length = 310 Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 10/92 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK-PRLGDILEEHIDDKSTISNKLWE 59 + A DFG+PQ R R++ I L ++ F F + P + + LEE +D+K + Sbjct: 149 LNAMDFGLPQDRNRVFTISILGENL-FDFDKLEKKETPHIKEFLEEIVDEKYIVR----- 202 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 Q F L T++ Sbjct: 203 --QPSMLRRIGVSGNFKGRLEIIED-HCKTIT 231 >gi|148988375|ref|ZP_01819822.1| cytosine specific DNA methyltransferase [Streptococcus pneumoniae SP6-BS73] gi|147926056|gb|EDK77130.1| cytosine specific DNA methyltransferase [Streptococcus pneumoniae SP6-BS73] Length = 351 Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 34/95 (35%), Gaps = 7/95 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+GVPQ R+R+ + N F++P LG + + ++ + Sbjct: 152 LLASDYGVPQNRKRVIFVGTRND--GFEYPEALGTIITTEMAISDLPTLENELGEIEMSY 209 Query: 61 HQKR-----KENNKIAGKGFGYGLFFENSATTNTL 90 + K K + + + +T+ Sbjct: 210 VSEPQNDYQKLMRKRSNVVLNHVAAKHSEKVISTI 244 >gi|23100791|ref|NP_694258.1| cytosine-specific methyltransferase [Oceanobacillus iheyensis HTE831] gi|50897489|sp|Q8EL95|MT36_OCEIH RecName: Full=Putative modification methylase OB3336; AltName: Full=Cytosine-specific methyltransferase; AltName: Full=M.OihORF3336P gi|22779025|dbj|BAC15292.1| cytosine-specific methyltransferase [Oceanobacillus iheyensis HTE831] Length = 460 Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF-PTPLGIKP 37 + A DFGVPQ R RL+++ + KF P P Sbjct: 177 LNAADFGVPQTRVRLFVMAIKKDIGKIKFIPEPTHKPH 214 >gi|327463101|gb|EGF09422.1| modification methylase DdeI [Streptococcus sanguinis SK1] Length = 351 Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 7/95 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+GVPQ R+R+ + N F++PT LG L + ++ + + Sbjct: 152 LLASDYGVPQNRKRVIFVGTKND--GFEYPTSLGTTITTEMALSDLPTLENELGDAEMVY 209 Query: 61 HQKRKENNKIAGKG-----FGYGLFFENSATTNTL 90 + K N + + + + T+T+ Sbjct: 210 VSEPKNNYQKLMRKQSSVVLNHIAAKHSEKVTSTI 244 >gi|227112465|ref|ZP_03826121.1| putative C-5 cytosine-specific DNA methylase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 390 Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKF-PTPLGIKPRLG 40 + A D+GVPQ R+R++I KF P P P G Sbjct: 164 INAVDYGVPQNRKRVFIFGIHEDLNNSTIKFPPKPTHHSPNSG 206 >gi|322412375|gb|EFY03283.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 401 Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 31/111 (27%), Gaps = 17/111 (15%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFP----------------TPLGIKPRLGDIL 43 + + DF VPQ RER++II F FP P G L Sbjct: 98 LNSKDFQVPQNRERIFIIGHSRRYRPRFLFPLRGENSAASLERLGNVNPSGKGMNGEVYL 157 Query: 44 EEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARY 94 + T K F N TL+++Y Sbjct: 158 SRGLAPTLTRGKGEGTKIAIPVLTPDRLEKRQHGRRFKGNDNPMFTLTSQY 208 >gi|262192113|ref|ZP_06050275.1| DNA-cytosine methyltransferase [Vibrio cholerae CT 5369-93] gi|262032024|gb|EEY50600.1| DNA-cytosine methyltransferase [Vibrio cholerae CT 5369-93] Length = 393 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 31/102 (30%), Gaps = 15/102 (14%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV---EFKF-PTPLGIKPRLGDILEEHIDDKST----- 52 A D+GVPQ R+R++I F P P G Sbjct: 165 NAKDYGVPQNRKRVFIYGLRQDLDTDSNHVFPPEPTHFSATSGKHPHWVTASSVFEKIPK 224 Query: 53 -ISNKLWEGHQKRK-----ENNKIAGKGFGYGLFFENSATTN 88 + ++ W+ + K K E YG + + N Sbjct: 225 ELYDQYWDKYFKIKTKLTYEQTITLLSSLTYGEKLKENDPCN 266 >gi|12229863|sp|Q59605|MTB5_NEIGO RecName: Full=Modification methylase NgoBV; Short=M.NgoBV; AltName: Full=Cytosine-specific methyltransferase NgoBV; Short=M.NgoV gi|1165242|gb|AAA86268.1| M.NgoV DNA methylase [Neisseria gonorrhoeae] Length = 423 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 3/79 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH-IDDKSTISNKLWE 59 + A +FG+PQ R+R+Y+ L + F P+L +ILE + S KL + Sbjct: 158 LNAKEFGIPQNRKRIYLTGSLKSKPDLSF--ETSPSPKLKNILESGLPTESSPFIKKLLK 215 Query: 60 GHQKRKENNKIAGKGFGYG 78 + K G Sbjct: 216 KFPPSELYGKSVKDKRGGK 234 >gi|313884351|ref|ZP_07818113.1| putative modification methylase BanI [Eremococcus coleocola ACS-139-V-Col8] gi|312620429|gb|EFR31856.1| putative modification methylase BanI [Eremococcus coleocola ACS-139-V-Col8] Length = 335 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Query: 1 MKACDFGVPQRRERLYIIDFL---NPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A FGV Q+R+RL +I ++F++P G L D+L++ D ++ Sbjct: 146 LNAAYFGVGQKRQRLIVIGIRSDLKDKIDFEYPKEDGEMTILRDVLKDVPDSPYQPYSE 204 >gi|314055098|ref|YP_004063436.1| cytosine-specific methyltransferase [Ostreococcus tauri virus 2] gi|313574989|emb|CBI70002.1| cytosine-specific methyltransferase [Ostreococcus tauri virus 2] Length = 315 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 33/94 (35%), Gaps = 11/94 (11%) Query: 8 VPQRRERLYIIDFLN----PSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQK 63 VPQ RER+YI+ F + + F F D +E + DK S+K Sbjct: 153 VPQHRERIYIVGFRDKELHDNFNFDFVEGDKGNLC--DFMESCVPDKYYYSDKYKVFDMI 210 Query: 64 RKENNKIAGKGFGYG-----LFFENSATTNTLSA 92 K + Y + S TL+A Sbjct: 211 NSNVVKNISENVIYQYRRYYVRENKSNLCPTLTA 244 >gi|302876802|ref|YP_003845435.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|307687485|ref|ZP_07629931.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|302579659|gb|ADL53671.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] Length = 363 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 20/31 (64%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT 31 + A D+G+PQ R+R++ + N EF+FP Sbjct: 155 LYAPDYGIPQIRKRVFFVGLRNSDTEFEFPE 185 >gi|212694208|ref|ZP_03302336.1| hypothetical protein BACDOR_03734 [Bacteroides dorei DSM 17855] gi|212663274|gb|EEB23848.1| hypothetical protein BACDOR_03734 [Bacteroides dorei DSM 17855] Length = 370 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 34/104 (32%), Gaps = 11/104 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPL----GIKPRLGDILEEHIDDKSTISN 55 + A D+ VPQ RER++++ + + + P + + L + + Sbjct: 155 LNATDYNVPQARERIFVVGIRGDEHKKPNWEKMILKYRHKAPTVRETLSVLDKAGTGNNK 214 Query: 56 KLWEGHQKRKENNKIAGKGF------GYGLFFENSATTNTLSAR 93 + + N + + G G + TL A Sbjct: 215 GVCKAKITLCLNPVLRKSPYAGMLFNGLGRPTRIDGYSATLPAS 258 >gi|224543136|ref|ZP_03683675.1| hypothetical protein CATMIT_02336 [Catenibacterium mitsuokai DSM 15897] gi|224523923|gb|EEF93028.1| hypothetical protein CATMIT_02336 [Catenibacterium mitsuokai DSM 15897] Length = 430 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 2/84 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A FG+PQ R+R+YI+ + + L D+LE I + +L Sbjct: 159 LNAKYFGIPQERKRIYIVGTKKEKPNLE--KFHRLDCSLADVLETGIPTMDSKFTRLLLK 216 Query: 61 HQKRKENNKIAGKGFGYGLFFENS 84 H +E A K G +S Sbjct: 217 HYSVEELFGKAIKDKRGGNNNIHS 240 >gi|218245850|ref|YP_002371221.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] gi|257058898|ref|YP_003136786.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] gi|218166328|gb|ACK65065.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] gi|256589064|gb|ACU99950.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] Length = 418 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 7/96 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A ++GVPQ RERL+++ + +P + ++ + +WE Sbjct: 157 LNAANYGVPQNRERLFLLGCQKGLILPNYPQAISYNFTNKSEPNNQLNLPKCPT--VWEA 214 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 + E + + +N Y K Sbjct: 215 IKDLPEVENYPELEKQDWVIADYKKPSN-----YGK 245 >gi|121703830|ref|XP_001270179.1| C-5 cytosine methyltransferase DmtA [Aspergillus clavatus NRRL 1] gi|119398323|gb|EAW08753.1| C-5 cytosine methyltransferase DmtA [Aspergillus clavatus NRRL 1] Length = 617 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 37/103 (35%), Gaps = 7/103 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + D+GVPQ R+RL II V FP P P G + I+ + Sbjct: 454 LNCMDYGVPQPRKRLVIIASGPGEVLPPFPRPTHGLPGSGLLPYATINSVISNIPP--NA 511 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSAR-----YYKDG 98 E +I G+ G F + T++ Y+ G Sbjct: 512 LDHDIEGARIRGRRNGLRAPFSPNQQAKTITCSGGENNYHPSG 554 >gi|302551692|ref|ZP_07304034.1| modification methylase NaeI [Streptomyces viridochromogenes DSM 40736] gi|302469310|gb|EFL32403.1| modification methylase NaeI [Streptomyces viridochromogenes DSM 40736] Length = 415 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A ++GVPQ R R ++ + + F +P +G L++ + K + + W Sbjct: 144 LHANNYGVPQLRPRFVLVAMRHEDAQWFNWPEEKPTTQTVGTALQDMMAAKGWLGAEAWA 203 >gi|217964683|ref|YP_002350361.1| cytosine-specific methyltransferase [Listeria monocytogenes HCC23] gi|217333953|gb|ACK39747.1| cytosine-specific methyltransferase [Listeria monocytogenes HCC23] Length = 340 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 10/102 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKP-RLGDILEEHIDDKSTISNKLW 58 + + DFGVPQ RER++II L + + FP + ++ + + S + Sbjct: 148 LNSKDFGVPQNRERVFIIGHLRGAGGREIFPLAEASRTADESRVIANTLTARYPYSQREG 207 Query: 59 EGHQKRKENNK--------IAGKGFGYGLFFENSATTNTLSA 92 + +++ + K F TL+A Sbjct: 208 TYIETTRKSEQVMPVLTPDRIIKRQNGRRFKTLGEPAFTLTA 249 >gi|192292294|ref|YP_001992899.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1] gi|192286043|gb|ACF02424.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1] Length = 500 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 5/96 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLG-IKPRLGDILEEHIDDKSTISNKLW 58 + A +GVPQ RER+++I + + +FP P + G + K + Sbjct: 185 LNAARYGVPQMRERMFLIAYRKELQQTVEFPKPTHWVDLPAGYEGSRAVALKLLSRDLFS 244 Query: 59 E-GHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 E GH + K T+ AR Sbjct: 245 ESGHYVPAPDAGRNLKPAVTAKQAIGDLP--TIYAR 278 >gi|319744417|gb|EFV96775.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus agalactiae ATCC 13813] Length = 450 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 3/84 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF VPQ RER++II F FP + L ++ ++ Sbjct: 151 LNSKDFQVPQNRERIFIIGHSRRYRPRFLFPLRGENSSAGLERLGNVNPSGKGMNGEV-- 208 Query: 60 GHQKRKENNKIAGKGFGYGLFFEN 83 + GKG G + + Sbjct: 209 YLSRGIAPTLTRGKGEGTKILTPD 232 >gi|310657622|ref|YP_003935343.1| cytosine-specific methyltransferase [Clostridium sticklandii DSM 519] gi|308824400|emb|CBH20438.1| Cytosine-specific methyltransferase [Clostridium sticklandii] Length = 344 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 31/73 (42%), Gaps = 2/73 (2%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQ 62 A D+GVPQ R+R+ + + EF+FP + L + + + N+ ++ Sbjct: 150 ASDYGVPQSRKRVIFVGHQDK--EFEFPEKMNTYVTCEMALSDLPPLEDCLGNEESPYYK 207 Query: 63 KRKENNKIAGKGF 75 + + + + Sbjct: 208 DPQNDYQQIMRQH 220 >gi|262171500|ref|ZP_06039178.1| modification methylase PspPI (Cytosine-specific methyltransferase PspPI) (M.PspPI) [Vibrio mimicus MB-451] gi|261892576|gb|EEY38562.1| modification methylase PspPI (Cytosine-specific methyltransferase PspPI) (M.PspPI) [Vibrio mimicus MB-451] Length = 416 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 3/87 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 +KA F VPQ+RERL ++ F +P+P L D + + Sbjct: 222 LKAIFFKVPQKRERLILVGIRKDLANSVEFHWPSPYKKIMTLRDAFYAGELYATDVPQSP 281 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENS 84 + + +RK GY +S Sbjct: 282 GQVYPERKRQIMDYVPQGGYWRDLPDS 308 >gi|255280633|ref|ZP_05345188.1| modification methylase DdeI [Bryantella formatexigens DSM 14469] gi|255269098|gb|EET62303.1| modification methylase DdeI [Bryantella formatexigens DSM 14469] Length = 378 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 15/33 (45%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 A D+GVPQ R R +I + FP P Sbjct: 152 NAADYGVPQARPRFVLIGIRGFDKKITFPQPTH 184 >gi|163755904|ref|ZP_02163021.1| modification methylase (Eco47II, Sau96I) [Kordia algicida OT-1] gi|161324075|gb|EDP95407.1| modification methylase (Eco47II, Sau96I) [Kordia algicida OT-1] Length = 413 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 1/78 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 +KA ++ VPQ+RERL ++ +++ +P P L D L++ + + Sbjct: 219 LKAINYKVPQKRERLILVGIRKDIDIKYDYPKPHNKIYNLSDALKKGELYDNNVPKSEGS 278 Query: 60 GHQKRKENNKIAGKGFGY 77 + K+ GY Sbjct: 279 KYPDHKKEVLDLVPPKGY 296 >gi|307570754|emb|CAR83933.1| C-5 cytosine-specific DNA methylase [Listeria monocytogenes L99] gi|307572166|emb|CAR85345.1| C-5 cytosine-specific DNA methylase [Listeria monocytogenes L99] Length = 426 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 10/102 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKP-RLGDILEEHIDDKSTISNKLW 58 + + DFGVPQ RER++II L + + FP + ++ + + S + Sbjct: 148 LNSKDFGVPQNRERVFIIGHLRGAGGREIFPLAEASRTADESRVIANTLTARYPYSQREG 207 Query: 59 EGHQKRKENNK--------IAGKGFGYGLFFENSATTNTLSA 92 + +++ + K F TL+A Sbjct: 208 TYIETTRKSEQVMPVLTPDRIIKRQNGRRFKTLGEPAFTLTA 249 >gi|296393591|ref|YP_003658475.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985] gi|296180738|gb|ADG97644.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985] Length = 372 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%) Query: 3 ACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIK 36 A D+GVPQ+R R+ +I F FP P Sbjct: 155 AADYGVPQQRWRVLVIGIREDQNPEGFAFPEPTHSF 190 >gi|289423024|ref|ZP_06424844.1| putative site-specific DNA-methyltransferase [Peptostreptococcus anaerobius 653-L] gi|289156598|gb|EFD05243.1| putative site-specific DNA-methyltransferase [Peptostreptococcus anaerobius 653-L] Length = 706 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT-PLGIKPRLGDILEEHIDDKSTISNKL 57 + A +FGVPQ RER+ I+ LN F F + L++ D + Sbjct: 147 LNARNFGVPQNRERIIIVGNLNGRA-FDFTKLKTNTIETMKPFLDKVADFEILPKESY 203 >gi|160939011|ref|ZP_02086362.1| hypothetical protein CLOBOL_03905 [Clostridium bolteae ATCC BAA-613] gi|158437974|gb|EDP15734.1| hypothetical protein CLOBOL_03905 [Clostridium bolteae ATCC BAA-613] Length = 226 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 2/72 (2%) Query: 2 KACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLGIK-PRLGDILEEHIDDKSTISNKLWE 59 + + VPQ R+R ++ ++ F FP P+L D LE+ + +K + ++ + Sbjct: 3 NSKYWNVPQNRDRYAVVGTRNKKNLSFTFPKEQHEFVPKLSDYLEKDVPEKYYLPDEKAQ 62 Query: 60 GHQKRKENNKIA 71 + Sbjct: 63 TIIAQAMEKLEK 74 >gi|311899150|dbj|BAJ31558.1| putative modification methylase [Kitasatospora setae KM-6054] Length = 430 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 33/102 (32%), Gaps = 4/102 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLG-IKPRLGDILEEHIDDKSTISNKLW 58 ++A FGVPQ R R ++ F +P + D L++ + + ++ Sbjct: 173 LEAASFGVPQLRPRAILVAIRKDLYRGFTWPKRTEAEGRTVFDALDKSMRKRFGMNPGKA 232 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENS--ATTNTLSARYYKDG 98 G + + + + TL K G Sbjct: 233 PGLDSEELREAAKARYRVWRDTARPAVPGVAPTLVGGSKKHG 274 >gi|254416815|ref|ZP_05030564.1| DNA-cytosine methyltransferase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196176361|gb|EDX71376.1| DNA-cytosine methyltransferase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 391 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 12/79 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK--------PRLGDILEEHID---D 49 ++A D+GVPQ RER+ I S FP + L D L ++ + Sbjct: 187 LQAADYGVPQNRERVVFIGSR-DSESVTFPLATHCQSGRDLPKWRTLRDALTNLVEQNPE 245 Query: 50 KSTISNKLWEGHQKRKENN 68 + S K + + K Sbjct: 246 FTPYSEKRLKYLRLLKSGQ 264 >gi|1709163|sp|P50188|MTN1_NOCAE RecName: Full=Modification methylase NaeI; Short=M.NaeI; AltName: Full=Cytosine-specific methyltransferase NaeI gi|775103|gb|AAC43325.1| NaeI modification methyltransferase [Lechevalieria aerocolonigenes] Length = 413 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHI 47 + A DFGVPQ R R ++ N F +P P G P +G+ L++ + Sbjct: 148 LHASDFGVPQLRPRFVLVALQNKFAPYFTWPEPTGAAPTVGETLKDLM 195 >gi|290891561|ref|ZP_06554618.1| hypothetical protein AWRIB429_2008 [Oenococcus oeni AWRIB429] gi|290478814|gb|EFD87481.1| hypothetical protein AWRIB429_2008 [Oenococcus oeni AWRIB429] Length = 382 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 37/105 (35%), Gaps = 14/105 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISN---- 55 + + +FGVPQ RER++II L + FP + I+ + + Sbjct: 149 LNSKNFGVPQNRERVFIIGHLRGERGREVFPITRENSGAIKRIVNGRESHGHSTYDVFGT 208 Query: 56 -------KLWEG--HQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 K +G Q + N G +++ TL+ Sbjct: 209 DGISPTLKTMQGGNLQPKILVNVNPSGNGMNGNVYDSDGLAPTLT 253 >gi|291299135|ref|YP_003510413.1| DNA-cytosine methyltransferase [Stackebrandtia nassauensis DSM 44728] gi|290568355|gb|ADD41320.1| DNA-cytosine methyltransferase [Stackebrandtia nassauensis DSM 44728] Length = 437 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 32/89 (35%), Gaps = 5/89 (5%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 A DFGVPQ R+R+ I+ F + + + G+ L + D S Sbjct: 200 NAADFGVPQIRQRVIIVAFRSDL-RVDWDSFRPRPRYSGEALWASMRDGSYWDRHKVPSR 258 Query: 62 QKRKENNKIAGKGFGYGLFFENSATTNTL 90 +R+ ++ L + TL Sbjct: 259 VRRRVMRELPDAP----LVEDGLKPWRTL 283 >gi|37693466|dbj|BAC99051.1| chloroplast-resident DNA methyltransferase [Chlamydomonas reinhardtii] Length = 1344 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 21/36 (58%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK 36 + A ++GVPQ R+R++II L V +P P+ Sbjct: 1006 LNAGNYGVPQSRKRVFIIAALPEEVLPNWPRPMHSF 1041 >gi|20278869|dbj|BAB91073.1| chloroplast-resident DNA methyltransferase [Chlamydomonas reinhardtii] Length = 1344 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 21/36 (58%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK 36 + A ++GVPQ R+R++II L V +P P+ Sbjct: 1006 LNAGNYGVPQSRKRVFIIAALPEEVLPNWPRPMHSF 1041 >gi|299820316|gb|ADJ54326.1| C5-cytosine specific methylase [archaeon enrichment culture clone 1(2010)] Length = 396 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 15/107 (14%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHID----------- 48 + + D+GVPQ+R RL+ I + + PTP + + I Sbjct: 147 LNSADYGVPQKRFRLFTIGIHRSLGKKPSLPTPTHSEKPVVTIFGTMPTWLTLREAIQDI 206 Query: 49 DKSTISNKLWEGHQKRKENNKIAGKGFGYGL---FFENSATTNTLSA 92 + L + +R + + KG +G T+S+ Sbjct: 207 MNIPPTTILRQEQVERIKRERENTKGIHWGKMEFPDNLDRPARTISS 253 >gi|309389435|gb|ADO77315.1| DNA-cytosine methyltransferase [Halanaerobium praevalens DSM 2228] Length = 328 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDK 50 ++ D+G+PQRR+R+ I+ + F+FP + D +++ K Sbjct: 152 LQTSDYGIPQRRKRIIIVGTKD--YTFEFPKKNNSVITVKDAIDDLPTLK 199 >gi|307067513|ref|YP_003876479.1| site-specific DNA methylase [Streptococcus pneumoniae AP200] gi|306409050|gb|ADM84477.1| Site-specific DNA methylase [Streptococcus pneumoniae AP200] Length = 321 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++++ +L + F F + R + LE + + T++ Sbjct: 151 LNAMDFGIPQKRERIFVVSYLGAN-NFSFNKLERKETRPLSEFLENDVSELYTMTQPYM- 208 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 K NK F L + T+S Sbjct: 209 ----LKFLNKGIDNSFRGRLKVIKD-FSYTIS 235 >gi|226330016|ref|ZP_03805534.1| hypothetical protein PROPEN_03929 [Proteus penneri ATCC 35198] gi|225200811|gb|EEG83165.1| hypothetical protein PROPEN_03929 [Proteus penneri ATCC 35198] Length = 325 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 3/101 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 +KA + VPQ+RERL +I S+ + +P+P + D L+ ++ + Sbjct: 120 LKAIFYQVPQKRERLILIAIRKDLVNSINYTWPSPYHKVMTMRDALKAGELFETDVPKSE 179 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 + + KRK+ GY + YY G Sbjct: 180 GQKYPKRKQEILSLVPQGGYWRDLPEELQKEYMQKSYYLGG 220 >gi|303285300|ref|XP_003061940.1| predicted protein [Micromonas pusilla CCMP1545] gi|226456351|gb|EEH53652.1| predicted protein [Micromonas pusilla CCMP1545] Length = 341 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 39/120 (32%), Gaps = 25/120 (20%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV---EFKFPTPL-GIKPRLGDILEEHI---------- 47 A + VPQ R+R+Y++ F + F++P + DILEE + Sbjct: 150 DAKGW-VPQSRKRVYLVGFRKDAALATPFRWPPRRDDCGGTVDDILEEEVEEESPDDGYD 208 Query: 48 ------DDKSTISNKLWEGHQKRKENNKIAGKG----FGYGLFFENSATTNTLSARYYKD 97 D S ++ E R LF E TL A Y K Sbjct: 209 ADVEDDDANVFTSCEVSEYQMDRASAYFKRVHHREPDHPGFLFAETGGVARTLCASYRKS 268 >gi|295104578|emb|CBL02122.1| DNA-methyltransferase (dcm) [Faecalibacterium prausnitzii SL3/3] Length = 293 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 27/74 (36%), Gaps = 6/74 (8%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG----DILEEHIDDKSTISNKLW 58 A D+GVPQ RER+ + EF P P P LE H DK + +W Sbjct: 143 AEDYGVPQTRERVIFVGTRKTLPEFVPPKPSVFAPITAYEALHDLENHPQDKDF--SHIW 200 Query: 59 EGHQKRKENNKIAG 72 + E Sbjct: 201 SKAKVSGEQGNRKL 214 >gi|319939117|ref|ZP_08013481.1| modification methylase BsuRI [Streptococcus anginosus 1_2_62CV] gi|319812167|gb|EFW08433.1| modification methylase BsuRI [Streptococcus anginosus 1_2_62CV] Length = 434 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 6/48 (12%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE------FKFPTPLGIKPRLGDIL 43 A D+GVPQ RER++++ +E ++ PTP ++L Sbjct: 232 NARDYGVPQSRERVFLVGVHKEKIEKKYGYRYELPTPTHGDGTEINLL 279 >gi|300868191|ref|ZP_07112823.1| Cytosine-specific methyltransferase [Oscillatoria sp. PCC 6506] gi|300333815|emb|CBN58007.1| Cytosine-specific methyltransferase [Oscillatoria sp. PCC 6506] Length = 395 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 13/78 (16%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK---------PRLGDILEEHIDDKS 51 + A D+GVPQ RER+ I + S P P + L D L+ ID + Sbjct: 192 LNAADYGVPQVRERVIFIGY-KGSDSVTLPLPTHSQSGVSRLPKWITLKDGLKGLIDPQP 250 Query: 52 ---TISNKLWEGHQKRKE 66 S + + K Sbjct: 251 EYIPYSEARLKYLRLLKA 268 >gi|254804928|ref|YP_003083149.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] gi|254668470|emb|CBA05754.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] Length = 312 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKP-RLGDILEEHIDDKSTISNKLW 58 + A D+GV Q R R+ + N FK+P P +P +G++L + + + + W Sbjct: 144 LYAADYGVSQLRPRVLFVALKNEYTNFFKWPEPNSEQPKTVGELLFDLMSENNWQGAHNW 203 >gi|194098495|ref|YP_002001557.1| DNA modification methylase [Neisseria gonorrhoeae NCCP11945] gi|239998889|ref|ZP_04718813.1| DNA modification methylase [Neisseria gonorrhoeae 35/02] gi|240115566|ref|ZP_04729628.1| DNA modification methylase [Neisseria gonorrhoeae PID18] gi|240125661|ref|ZP_04738547.1| DNA modification methylase [Neisseria gonorrhoeae SK-92-679] gi|254493672|ref|ZP_05106843.1| DNA modification methylase [Neisseria gonorrhoeae 1291] gi|260440624|ref|ZP_05794440.1| DNA modification methylase [Neisseria gonorrhoeae DGI2] gi|268594728|ref|ZP_06128895.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae 35/02] gi|268601236|ref|ZP_06135403.1| DNA modification methylase [Neisseria gonorrhoeae PID18] gi|268684247|ref|ZP_06151109.1| DNA modification methylase [Neisseria gonorrhoeae SK-92-679] gi|291043935|ref|ZP_06569651.1| DNA modification methylase [Neisseria gonorrhoeae DGI2] gi|193933785|gb|ACF29609.1| DNA modification methylase [Neisseria gonorrhoeae NCCP11945] gi|226512712|gb|EEH62057.1| DNA modification methylase [Neisseria gonorrhoeae 1291] gi|268548117|gb|EEZ43535.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae 35/02] gi|268585367|gb|EEZ50043.1| DNA modification methylase [Neisseria gonorrhoeae PID18] gi|268624531|gb|EEZ56931.1| DNA modification methylase [Neisseria gonorrhoeae SK-92-679] gi|291012398|gb|EFE04387.1| DNA modification methylase [Neisseria gonorrhoeae DGI2] gi|317164179|gb|ADV07720.1| DNA modification methylase [Neisseria gonorrhoeae TCDC-NG08107] Length = 312 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKP-RLGDILEEHIDDKSTISNKLW 58 + A D+GV Q R R+ + N FK+P P +P +G++L + + + + W Sbjct: 144 LYAADYGVSQLRPRVLFVALKNEYTNFFKWPEPNSEQPKTVGELLFDLMSENNWQGAHNW 203 >gi|216171|gb|AAA32604.1| DNA methyltransferase [Bacillus phage SPR] Length = 439 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 37/113 (32%), Gaps = 30/113 (26%) Query: 1 MKACDFGVPQRRERLYIIDFLNP------------------------------SVEFKFP 30 + + F VPQ RERLYII S F++ Sbjct: 149 LNSKFFNVPQNRERLYIIGIREDLIKNEEWSLDFKRKDILQKGKQRLVELDIKSFNFRWT 208 Query: 31 TPLGIKPRLGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFEN 83 RL D+LEE++D+K ++ K +++ + N Sbjct: 209 AQSAATKRLKDLLEEYVDEKYYLNEDKTNSLIKELSTSRLNENLTVEQVGNIN 261 >gi|400287|sp|P31033|MTM4_NEIGO RecName: Full=Modification methylase NgoMIV; Short=M.NgoMIV; AltName: Full=Cytosine-specific methyltransferase NgoMIV Length = 312 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKP-RLGDILEEHIDDKSTISNKLW 58 + A D+GV Q R R+ + N FK+P P +P +G++L + + + + W Sbjct: 144 LYAADYGVSQLRPRVLFVALKNEYTNFFKWPEPNSEQPKTVGELLFDLMSENNWQGAHNW 203 >gi|59801274|ref|YP_207986.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA 1090] gi|240014199|ref|ZP_04721112.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae DGI18] gi|240016634|ref|ZP_04723174.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA6140] gi|240080823|ref|ZP_04725366.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA19] gi|240112810|ref|ZP_04727300.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae MS11] gi|240117858|ref|ZP_04731920.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae PID1] gi|240121762|ref|ZP_04734724.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae PID24-1] gi|240123416|ref|ZP_04736372.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae PID332] gi|240128118|ref|ZP_04740779.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae SK-93-1035] gi|268596944|ref|ZP_06131111.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA19] gi|268598881|ref|ZP_06133048.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae MS11] gi|268603557|ref|ZP_06137724.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae PID1] gi|268682037|ref|ZP_06148899.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae PID332] gi|268686505|ref|ZP_06153367.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae SK-93-1035] gi|293399137|ref|ZP_06643302.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|5051442|emb|CAB44950.1| DNA modification methylase [Neisseria gonorrhoeae] gi|5262959|emb|CAB45015.2| DNA modification methylase [Neisseria gonorrhoeae] gi|59718169|gb|AAW89574.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA 1090] gi|268550732|gb|EEZ45751.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA19] gi|268583012|gb|EEZ47688.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae MS11] gi|268587688|gb|EEZ52364.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae PID1] gi|268622321|gb|EEZ54721.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae PID332] gi|268626789|gb|EEZ59189.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae SK-93-1035] gi|291610551|gb|EFF39661.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] Length = 312 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKP-RLGDILEEHIDDKSTISNKLW 58 + A D+GV Q R R+ + N FK+P P +P +G++L + + + + W Sbjct: 144 LYAADYGVSQLRPRVLFVALKNEYTNFFKWPEPNSEQPKTVGELLFDLMSENNWQGAHNW 203 >gi|330882498|gb|EGH16647.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea str. race 4] Length = 335 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTP-LGIKPRLGDILEEHI 47 + A D+GV Q R R+ + + F +P P L P +G +L + + Sbjct: 162 LNASDYGVSQLRPRVVFVGIQKKYADKFHWPEPGLVQPPTVGQLLHDLM 210 >gi|145301342|ref|YP_001144182.1| C-5 cytosine-specific DNA methylase [Aeromonas salmonicida subsp. salmonicida A449] gi|142856119|gb|ABO92434.1| C-5 cytosine-specific DNA methylase [Aeromonas salmonicida subsp. salmonicida A449] Length = 541 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 5/99 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG---DILEEHIDDKSTISNKL 57 + +FGV + R+RL ++ + F ++ + DILE D K Sbjct: 281 LDGNEFGVIEARKRLCVVAVSHGIDGFDLEQVQPVRTKESCINDILEPIPLDSQRW--KS 338 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 ++ +++ +K AGKGF L T+ Y K Sbjct: 339 FDYLAEKELRDKAAGKGFARQLLAGAETFCGTVGKGYSK 377 >gi|315222611|ref|ZP_07864500.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211] gi|315188297|gb|EFU22023.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211] Length = 317 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 7/92 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++++ L + F + + LEE + + + + Sbjct: 153 LNAMDFGIPQKRERIFVVSILGENYFNFSSLEKIE-AKDISKFLEEDVSNLYEVKQESML 211 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 H F L T+S Sbjct: 212 SH----IRGDPKNNHFKGRLKVI-DKFAYTIS 238 >gi|289423000|ref|ZP_06424820.1| modification methylase ScrFIB [Peptostreptococcus anaerobius 653-L] gi|289156574|gb|EFD05219.1| modification methylase ScrFIB [Peptostreptococcus anaerobius 653-L] Length = 329 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 5/91 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A +FG+PQ+RER++++ L + F F + R DI E D S + E Sbjct: 165 LNAIEFGIPQKRERIFVVSIL-GNNSFDFAKLEKTQTR--DISEFLEKDASNLYEVRQES 221 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + G T+S Sbjct: 222 MLRYIRGEPKNNNFRGRLKVI--DKFAYTIS 250 >gi|78776322|ref|YP_392637.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM 1251] gi|78496862|gb|ABB43402.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM 1251] Length = 395 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 13/107 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE------------FKFPTPLGIKPRLGDILEEHID 48 + A D+GVPQ RER++ I + +P + + Sbjct: 197 LNAADYGVPQSRERVFFIGIRRDLINDLTINMLINNELSLYPPQTHDYKNDFVSTSDILS 256 Query: 49 DKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYY 95 D + HQK + K GK + + T+ A ++ Sbjct: 257 DLPEPEDSSDISHQKYSK-AKWYGKHCQGQTEINPAGLSPTIRAEHH 302 >gi|91206207|ref|YP_538562.1| site-specific DNA methylase [Rickettsia bellii RML369-C] gi|91069751|gb|ABE05473.1| Site-specific DNA methylase [Rickettsia bellii RML369-C] Length = 308 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 11/103 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-----SVEFKFPTPLGIKPRLGDILEEHIDDKSTI-- 53 + A FGVPQ RER+Y + ++++ P L DILE+ ID I Sbjct: 142 LNASLFGVPQARERVYFVCLRKDFSSEYNLKYIKPKESYENVFLNDILEKDIDKNLYIDR 201 Query: 54 SNKLWEGH----QKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 S+ + + Q + KG + + TLSA Sbjct: 202 SDIVLNANSVEKQLKPIRIGQVNKGGQGERIYSPLGHSITLSA 244 >gi|238788388|ref|ZP_04632182.1| DNA-cytosine methyltransferase [Yersinia frederiksenii ATCC 33641] gi|238723634|gb|EEQ15280.1| DNA-cytosine methyltransferase [Yersinia frederiksenii ATCC 33641] Length = 380 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 5/60 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-----FPTPLGIKPRLGDILEEHIDDKSTISN 55 + D+GVPQ R+R+ I + PTP P L + K IS+ Sbjct: 154 LNTADYGVPQTRKRIIAIGVKAELFDINQLPAFPPTPTHCSPDKNSALPAWVTVKDAISD 213 >gi|225561042|gb|EEH09323.1| C-5 cytosine methyltransferase DmtA [Ajellomyces capsulatus G186AR] Length = 650 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 36/106 (33%), Gaps = 8/106 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG---DILEEHIDDKSTISNKL 57 + D+GVPQ R+RL I+ FP P P I + TI + + Sbjct: 467 LNCRDYGVPQSRQRLVILASGPGEPLPPFPKPTHTSPNTQINTTISTALLPPFRTIHDAI 526 Query: 58 WEGHQKRKENNKIAGKGFGYGLF-FENSATTNTLSA----RYYKDG 98 + +++ + ++ T++ Y+ G Sbjct: 527 SKIPPHHPDHDIQYARSRPLNRPTYDPHTQARTITCNGGENYHPSG 572 >gi|325069024|ref|ZP_08127697.1| modification methylase XorII [Actinomyces oris K20] Length = 201 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 17/46 (36%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH 46 + A D+G PQ R R +I FP P GD+ Sbjct: 152 LNAADYGAPQARRRAVLIGHRYDMAVPGFPEPTHSPDGGGDLPPYR 197 >gi|313888225|ref|ZP_07821897.1| DNA (cytosine-5-)-methyltransferase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845756|gb|EFR33145.1| DNA (cytosine-5-)-methyltransferase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 321 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++++ L + F F + R + LE+ + + T++ Sbjct: 151 LNAMDFGIPQKRERIFVVSCLGAN-NFSFNKLERKETRPLSEFLEKDVSELYTMTQPYM- 208 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 K NK F L + T+S Sbjct: 209 ----LKFLNKGIDNSFKGRLKVIKD-FSYTIS 235 >gi|300727022|ref|ZP_07060441.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Prevotella bryantii B14] gi|299775566|gb|EFI72157.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Prevotella bryantii B14] Length = 446 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 3/80 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLN--PSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A DFG+PQ+R+R+YI+ + +F P IK G I + + L Sbjct: 159 LDASDFGIPQKRKRVYIVGCKKRFGEINLEFNNP-KIKTVEGCIEHGLPVLDNKFTKLLL 217 Query: 59 EGHQKRKENNKIAGKGFGYG 78 + +K K G Sbjct: 218 SYYSPKKLQGKFLKDKRGGK 237 >gi|313677760|ref|YP_004055756.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] gi|312944458|gb|ADR23648.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] Length = 346 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 5/91 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DF VPQ R R + + N EF+FP P+ ++ K ++ + Sbjct: 152 LLASDFAVPQNRRRAFFVGLKNSL-EFEFPKPITTDNKITSEEAISDLPKDSLEDGCQYT 210 Query: 61 HQKRKENNKIAGKG----FGYGLFFENSATT 87 + + G F + + + T Sbjct: 211 INPKSVFQREMRNGNKVVFNHQITNHSEKTV 241 >gi|127431|sp|P00476|MTBS_BPSPR RecName: Full=Modification methylase SPRI; Short=M.SPRI; AltName: Full=Cytosine-specific methyltransferase SPRI gi|224091|prf||1010250A methyltransferase Length = 439 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 37/113 (32%), Gaps = 30/113 (26%) Query: 1 MKACDFGVPQRRERLYIIDFLNP------------------------------SVEFKFP 30 + + F VPQ RERLYII S F++ Sbjct: 149 LNSKFFNVPQNRERLYIIGIREDLIKNEEWSLDFKRKDILQKGKQRLVELDIKSFNFRWT 208 Query: 31 TPLGIKPRLGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFEN 83 RL D+LEE++D+K ++ K +++ + N Sbjct: 209 AQSAATKRLKDLLEEYVDEKYYLNEDKTNSLIKELSTSRLNENLTVEQVGNIN 261 >gi|315611977|ref|ZP_07886895.1| C-5 cytosine-specific DNA methylase [Streptococcus sanguinis ATCC 49296] gi|315315966|gb|EFU64000.1| C-5 cytosine-specific DNA methylase [Streptococcus sanguinis ATCC 49296] Length = 359 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 16/23 (69%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + + DFGVPQ RER++I+ L Sbjct: 147 LNSKDFGVPQNRERVFIVGHLRG 169 >gi|325678040|ref|ZP_08157677.1| putative modification methylase BspRI [Ruminococcus albus 8] gi|324110257|gb|EGC04436.1| putative modification methylase BspRI [Ruminococcus albus 8] Length = 358 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 4/38 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV----EFKFPTPLG 34 + ACD+GVPQ R+R++ + + +F FPTP Sbjct: 150 LTACDYGVPQARKRVFFVGVNKSKIKHTEKFVFPTPTH 187 >gi|300813808|ref|ZP_07094115.1| DNA (cytosine-5-)-methyltransferase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512098|gb|EFK39291.1| DNA (cytosine-5-)-methyltransferase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 321 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++++ L + F F + R + LE+ + + T++ Sbjct: 151 LNAMDFGIPQKRERIFVVSCLGAN-NFSFNKLERKETRPLSEFLEKDVSELYTMTQPYM- 208 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 K NK F L + T+S Sbjct: 209 ----LKFLNKGIDNSFRGRLKVIKD-FSYTIS 235 >gi|195867543|ref|ZP_03079546.1| type II restriction-modification system methylation subunit [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|195867960|ref|ZP_03079957.1| type II restriction-modification system methylation subunit [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|195660356|gb|EDX53616.1| type II restriction-modification system methylation subunit [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|195660787|gb|EDX54041.1| type II restriction-modification system methylation subunit [Ureaplasma urealyticum serovar 9 str. ATCC 33175] Length = 323 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++++ L + F F + R + LE+ + + T++ Sbjct: 151 LNAMDFGIPQKRERIFVVSCLGAN-NFSFNKLERKETRPLSEFLEKDVSELYTMTQPYM- 208 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 K NK F L + T+S Sbjct: 209 ----LKFLNKGIDNSFKGRLKVIKD-FSYTIS 235 >gi|300124212|gb|ADJ68008.1| M.BanII [Aneurinibacillus aneurinilyticus] Length = 385 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 37/104 (35%), Gaps = 11/104 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLN---PSVEFK--FPTPLGIKPRLGDILEE------HIDD 49 + + +GVPQ+RER++ + FLN F+ + + + + Sbjct: 149 LNSSHYGVPQKRERVFFVGFLNKVLDPQAFQSRIEQKKQKAKSVRETIMHLGPAGTDNNP 208 Query: 50 KSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 ++ + +++ G G + +NTL A Sbjct: 209 QTCTAKITLATKPVMRKSPYAGMIFNGMGRPLKLDDLSNTLPAS 252 >gi|313891845|ref|ZP_07825450.1| putative modification methylase HhaI [Dialister microaerophilus UPII 345-E] gi|313119839|gb|EFR43026.1| putative modification methylase HhaI [Dialister microaerophilus UPII 345-E] Length = 394 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 39/110 (35%), Gaps = 18/110 (16%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISN----- 55 + D+GVPQ RER+YI+ L + P + L +++ D+ + Sbjct: 153 NSKDYGVPQNRERVYIVGHLGERCGRELLPVARKSERALKKVIDGSQGDRVYEPDLSCTL 212 Query: 56 -------KLWEGHQKRKENNKIAGKGFGYGL-----FFENSATTNTLSAR 93 G ++ K G G + E + TL+AR Sbjct: 213 SSQGGGMGAKTGLYMIQKGCKFRYPERGVGKRTASGYVELTNIAGTLTAR 262 >gi|262402827|ref|ZP_06079388.1| type II restriction-modification system methylation subunit [Vibrio sp. RC586] gi|262351609|gb|EEZ00742.1| type II restriction-modification system methylation subunit [Vibrio sp. RC586] Length = 341 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPL 33 +KA DF VPQ R R+ I+ + + + FP P+ Sbjct: 155 LKASDFEVPQNRHRVIIVGVRHDVNNNYTFPEPI 188 >gi|303233873|ref|ZP_07320524.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna BVS033A4] gi|302495017|gb|EFL54772.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna BVS033A4] Length = 315 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++++ L + F F + R + LE+++ + T++ Sbjct: 151 LNAMDFGIPQKRERIFVVSCLGAN-NFSFNKLERKETRPLSEFLEKNVSELYTMTQPYML 209 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + + F L + T+S Sbjct: 210 KFLNKCID-----NSFRGRLKVIKD-FSYTIS 235 >gi|218441171|ref|YP_002379500.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] gi|218173899|gb|ACK72632.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] Length = 415 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT-PLGIKPRLGDILEEHIDDKSTI 53 + A ++GVPQ R+RL+++ K+P K + + +++ + Sbjct: 161 LNAANYGVPQNRKRLFLLGGKKNLPPLKYPEAISDKKTTVWEAIQDLPEVNDYP 214 >gi|326772743|ref|ZP_08232027.1| modification methylase XorII [Actinomyces viscosus C505] gi|326637375|gb|EGE38277.1| modification methylase XorII [Actinomyces viscosus C505] Length = 364 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 17/46 (36%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH 46 + A D+G PQ R R +I FP P GD+ Sbjct: 152 LNAADYGAPQARRRAVLIGHRYDMAVPGFPEPTHSPDGGGDLPPYR 197 >gi|150400370|ref|YP_001324137.1| DNA-cytosine methyltransferase [Methanococcus vannielii SB] gi|150013073|gb|ABR55525.1| DNA-cytosine methyltransferase [Methanococcus vannielii SB] Length = 368 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 38/105 (36%), Gaps = 14/105 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLG---------IKPRLGDILEEHIDDK 50 + D+GVPQ R R+ I+ N V + +P P+ D L + ID K Sbjct: 190 LNTADYGVPQTRIRVIIMGIRNDYVGDIMYPKPVRGNEGLFEWMTSKEAIDDLWDKIDSK 249 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYY 95 ++ + + + K + + T+ A ++ Sbjct: 250 EVFNHSSKDYSKAKFYPGKKMQGNYK----ILADRPSITIRAEHH 290 >gi|20385949|gb|AAM21516.1|AF438205_2 GST-M.SPRX methyltransferase fusion protein [Mutation screening vector pSPRX] Length = 659 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 37/113 (32%), Gaps = 30/113 (26%) Query: 1 MKACDFGVPQRRERLYIIDFLNP------------------------------SVEFKFP 30 + + F VPQ RERLYII S F++ Sbjct: 375 LNSKFFNVPQNRERLYIIGIREDLIKNEEWSLDFKRKDILQKGKQRLVELDIKSFNFRWT 434 Query: 31 TPLGIKPRLGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFEN 83 RL D+LEE++D+K ++ K +++ + N Sbjct: 435 AQSAATKRLKDLLEEYVDEKYYLNEDKTNSLIKELSTSRLNENLTVEQVGNIN 487 >gi|170754579|ref|YP_001781640.1| DNA-cytosine methyltransferase [Clostridium botulinum B1 str. Okra] gi|169119791|gb|ACA43627.1| DNA-cytosine methyltransferase [Clostridium botulinum B1 str. Okra] Length = 444 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 8/83 (9%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTIS------ 54 A D+GVPQ RER++++ + F +P + R + K S Sbjct: 187 ASDYGVPQNRERVFLVAINEKYGDNKFIYPEKTHGEGRKYPYITVGEAFKYLPSLNSGGG 246 Query: 55 NKLWEGHQKRKENNKIAGKGFGY 77 ++ + H +E K G+ Sbjct: 247 EEIQQIHYYYEEEYKNNKISEGF 269 >gi|281491831|ref|YP_003353811.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp. lactis KF147] gi|281375542|gb|ADA65048.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp. lactis KF147] Length = 347 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 18/31 (58%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT 31 + A DFGVPQ+R R+ + N +F FP Sbjct: 153 LVASDFGVPQKRRRIVFVGLQNDVFDFNFPE 183 >gi|30019096|ref|NP_830727.1| Type II restriction-modification system methylation subunit [Bacillus cereus ATCC 14579] gi|29894639|gb|AAP07928.1| Type II restriction-modification system methylation subunit [Bacillus cereus ATCC 14579] Length = 373 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPL 33 +KA D+GVPQ+R R+ + F V +KFP P Sbjct: 163 LKASDYGVPQQRYRVIFVAFRKDLDVNYKFPLPT 196 >gi|154277578|ref|XP_001539629.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150413214|gb|EDN08597.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 699 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 36/106 (33%), Gaps = 8/106 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG---DILEEHIDDKSTISNKL 57 + D+GVPQ R+RL I+ FP P P I + TI + + Sbjct: 467 LNCRDYGVPQSRQRLVILASGPGEPLPPFPKPTHASPNTQVNTTITTALLPPFRTIHDAI 526 Query: 58 WEGHQKRKENNKIAGKGFGYGLF-FENSATTNTLSA----RYYKDG 98 + +++ + ++ T++ Y+ G Sbjct: 527 SKIPPHHPDHDIQYARSRPLNRPTYDPHTQARTITCNGGENYHPSG 572 >gi|158320926|ref|YP_001513433.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs] gi|158141125|gb|ABW19437.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs] Length = 423 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 12/94 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFP--TPLGIKPRLGDILEEHID-------DKS 51 M A DFGV Q R+R+ II + EF +P + + ++LE+ DK Sbjct: 205 MDAKDFGVLQSRKRVIIIGWRKDL-EFDYPIFESDDKEFTVNNLLEDLPKINSGEIYDKF 263 Query: 52 TISNKLWEGHQKRKENNKIAGKGFGYGLFFENSA 85 K+ + Q ++ + + N+ Sbjct: 264 RYRKKINKYLQN--TQLRVEDDIITHHIARPNNE 295 >gi|298735876|ref|YP_003728401.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] gi|298355065|emb|CBI65937.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] Length = 312 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 4/90 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q+RERLYI+ F F FP L D L+ D + Sbjct: 139 LNSTDFQLAQKRERLYIVGFRKDLKHPFHFPLGLANDYYFEDFLDA---DNECYLDVSNA 195 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 Q+ N + F + +A +T Sbjct: 196 IFQRYLHNPYNHNRVFLENILTLENAVLDT 225 >gi|320007884|gb|ADW02734.1| DNA-cytosine methyltransferase [Streptomyces flavogriseus ATCC 33331] Length = 660 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 41/102 (40%), Gaps = 3/102 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPT--PLGIKPRLGDILEEHIDDKSTISNKLWE 59 A +GVPQ R+RL ++ N F + + L D + + + ++ + Sbjct: 201 DAWKYGVPQHRKRLILLA-RNDVERFSWRQELEQEQRTTLRDAIGDLPVLPVVPTERVGQ 259 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 E ++++G G + + ++ R KD +EI Sbjct: 260 RELPYDEPSELSGFGKDMRKWARKDRVWDHMTRRVRKDDAEI 301 >gi|302873652|ref|YP_003842285.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|307686624|ref|ZP_07629070.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|302576509|gb|ADL50521.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] Length = 445 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 14/112 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR-------LGDILEEHIDDKSTI 53 M A ++GVPQRR R+ I + + V ++P P + + D++ E Sbjct: 182 MDAANYGVPQRRNRVIFIAYRDDVVAPQYPEPTVTEETKLTIEDAITDLIRERRVRNRIF 241 Query: 54 SNKLWEGHQKR-----KENNKIAGKGFGYGLFFENSATTNTLSARY--YKDG 98 + +L + Q + N G E S+ T + R+ +K+G Sbjct: 242 NGRLSQFQQDSINGRTPDINGNTINSNGVIYNNEVSSHTPIIKERFSLFKEG 293 >gi|147919344|ref|YP_686920.1| C-5 cytosine-specific DNA methyltransferase [uncultured methanogenic archaeon RC-I] gi|110622316|emb|CAJ37594.1| C-5 cytosine-specific DNA methyltransferase [uncultured methanogenic archaeon RC-I] Length = 419 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 3/74 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL--GDILEEHIDDKSTISNKLW 58 + A +F V Q R+R+ II + +P + D+L + + K +++ Sbjct: 200 LNASNFNVLQNRKRIIIIGWKKEY-NLSYPDFAKSQTPYIINDLLSDLPELKPGCGSEIS 258 Query: 59 EGHQKRKENNKIAG 72 R + + +G Sbjct: 259 NYTGDRTKYLQESG 272 >gi|78778033|ref|YP_394348.1| DNA (cytosine-5-)-methyltransferase., Type II site-specific deoxyribonuclease [Sulfurimonas denitrificans DSM 1251] gi|78498573|gb|ABB45113.1| DNA (cytosine-5-)-methyltransferase., Type II site-specific deoxyribonuclease [Sulfurimonas denitrificans DSM 1251] Length = 657 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDIL 43 +KA D+G+PQ R R ++I F + + F FP + +K + D+ Sbjct: 160 IKASDYGLPQLRPRTFMIGFRDEDILKGFNFPPKIPLKFNMSDVW 204 >gi|187923153|ref|YP_001894795.1| DNA-cytosine methyltransferase [Burkholderia phytofirmans PsJN] gi|187714347|gb|ACD15571.1| DNA-cytosine methyltransferase [Burkholderia phytofirmans PsJN] Length = 317 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 10/78 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDI---------LEEHIDDK 50 M A DFGV Q R+R+ I+ VE+ FP + D+ L + + Sbjct: 144 MNAQDFGVAQERKRIIIVGIRKDLGVEYAFPYATHGEHGEKDLATIRDALDGLPDWPTGE 203 Query: 51 STISNKLWEGHQKRKENN 68 W + + + Sbjct: 204 FCEDPFHWYYMSRNRRRD 221 >gi|328947436|ref|YP_004364773.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] gi|328447760|gb|AEB13476.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] Length = 439 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 4/86 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + + DF +PQ+RER Y + FL+ + +F FP I L DI++ D+ S KL + Sbjct: 240 LSSLDFELPQKRERWYCVGFLSKT-DFVFPAGTKIHKNLRDIIDLDNQDE---SLKLPKF 295 Query: 61 HQKRKENNKIAGKGFGYGLFFENSAT 86 R + K + +NS Sbjct: 296 ELDRIAYHFEMAKNKTDRVKHDNSKY 321 >gi|237737311|ref|ZP_04567792.1| DNA-cytosine methyltransferase [Fusobacterium mortiferum ATCC 9817] gi|229421173|gb|EEO36220.1| DNA-cytosine methyltransferase [Fusobacterium mortiferum ATCC 9817] Length = 407 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFP--TPLGIKPRLGDILEEHIDDK 50 + A DFGVPQ R+R+ II + N FK+P + + + + K Sbjct: 194 LDAKDFGVPQSRKRVIIIGWKNEL-NFKYPNFETIKNDITINQLFADLPKIK 244 >gi|228982443|ref|ZP_04142702.1| Cytosine-specific methyltransferase [Bacillus thuringiensis Bt407] gi|228776626|gb|EEM24934.1| Cytosine-specific methyltransferase [Bacillus thuringiensis Bt407] Length = 418 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 42/100 (42%), Gaps = 6/100 (6%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE-FKFPTP--LGIKPRLGDILEEHIDDKSTISNKLW 58 ++G+PQ R+R++++ + + F+FP + + + D + + + +++ Sbjct: 159 DCYEYGIPQHRKRVFMVGIRSNLGKTFEFPEIVSISERKTIRDAIGDLPNPDKVMNS--L 216 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTL-SARYYKD 97 + Q + GYG+ + + + +KD Sbjct: 217 KDIQYEAQEQSSVHNHVGYGIRSDEKEFVHKIPVGGNWKD 256 >gi|229490017|ref|ZP_04383870.1| modification methylase DdeI [Rhodococcus erythropolis SK121] gi|229323118|gb|EEN88886.1| modification methylase DdeI [Rhodococcus erythropolis SK121] Length = 431 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%) Query: 2 KACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLG 34 A D+GVPQ RER++I+ S +FP Sbjct: 242 NAQDYGVPQFRERVFIVATRRDSGIGPLRFPPKTH 276 >gi|226307434|ref|YP_002767394.1| modification methylase [Rhodococcus erythropolis PR4] gi|226186551|dbj|BAH34655.1| putative modification methylase [Rhodococcus erythropolis PR4] Length = 444 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%) Query: 2 KACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLG 34 A D+GVPQ RER++I+ S +FP Sbjct: 255 NAQDYGVPQFRERVFIVATRRDSSIGPLRFPPKTH 289 >gi|159477134|ref|XP_001696666.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas reinhardtii] gi|158282891|gb|EDP08643.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas reinhardtii] Length = 1333 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 21/36 (58%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK 36 + A ++GVPQ R+R++II L V +P P+ Sbjct: 994 LNAGNYGVPQSRQRVFIIAALPEEVLPNWPRPMHSF 1029 >gi|238765010|ref|ZP_04625947.1| DNA-cytosine methyltransferase [Yersinia kristensenii ATCC 33638] gi|238696779|gb|EEP89559.1| DNA-cytosine methyltransferase [Yersinia kristensenii ATCC 33638] Length = 338 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 5/60 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-----FPTPLGIKPRLGDILEEHIDDKSTISN 55 + D+GVPQ R+R+ I + PTP P L + K IS+ Sbjct: 150 LNTADYGVPQTRKRVIAIGVKAELFDINQLPAFPPTPTHCSPDKNSALPAWVTVKDAISD 209 >gi|257062089|ref|YP_003139977.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] gi|256592255|gb|ACV03142.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] Length = 456 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 7/80 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILEEHID----DKSTI 53 + + DFG+ Q R+R++I+ F FP PL + P+L + +E K Sbjct: 173 LNSYDFGLSQDRDRVFIVGIHQQIENAAQFSFPEPLNLSPKLYEFIEGIEKQELVKKKFS 232 Query: 54 SNKLWEGHQKRKENNKIAGK 73 + L+EG Sbjct: 233 PDILFEGKIPASRGRFQKND 252 >gi|229126345|ref|ZP_04255362.1| Cytosine-specific methyltransferase [Bacillus cereus BDRD-Cer4] gi|228657116|gb|EEL12937.1| Cytosine-specific methyltransferase [Bacillus cereus BDRD-Cer4] Length = 363 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPL 33 +KA D+GVPQ+R R+ + F V +KFP P Sbjct: 153 LKASDYGVPQQRYRVIFVAFRKDLDVNYKFPLPT 186 >gi|254225219|ref|ZP_04918832.1| C-5 cytosine-specific DNA methylase superfamily [Vibrio cholerae V51] gi|125622318|gb|EAZ50639.1| C-5 cytosine-specific DNA methylase superfamily [Vibrio cholerae V51] Length = 303 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 17/47 (36%), Gaps = 4/47 (8%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV---EFKF-PTPLGIKPRLGDILE 44 A D+GVPQ R+R++I F P P G Sbjct: 75 NAKDYGVPQNRKRVFIYGLRQDLDTDSNHVFPPEPTHFSATSGKHPH 121 >gi|53804329|ref|YP_114062.1| C-5 cytosine-specific DNA methylase family protein [Methylococcus capsulatus str. Bath] gi|53758090|gb|AAU92381.1| C-5 cytosine-specific DNA methylase family protein [Methylococcus capsulatus str. Bath] Length = 345 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID----DKSTISNKLW 58 A D+GVPQ RER+ I+ L F+ P P+ R + D D+ N +W Sbjct: 196 AADYGVPQTRERVLIVGTLPGVKPFEPPKPIISPSRYITAKQAIDDLAALDEDEEINHVW 255 Query: 59 E 59 Sbjct: 256 S 256 >gi|225017397|ref|ZP_03706589.1| hypothetical protein CLOSTMETH_01323 [Clostridium methylpentosum DSM 5476] gi|224949807|gb|EEG31016.1| hypothetical protein CLOSTMETH_01323 [Clostridium methylpentosum DSM 5476] Length = 485 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 31/100 (31%), Gaps = 6/100 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLN---PSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + FG PQ RER++I+ + FP P G L ++ + + Sbjct: 152 LNTKYFGPPQNRERVFIVACRHPGAGRGPKIFPVPAGSGKALIQLIGGMQGQRVYDPAGI 211 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFEN---SATTNTLSARY 94 + + L N + + A+Y Sbjct: 212 SVTMAAQSGGWGGKTGLYFVDLCNGNPKLTDHARCIKAKY 251 >gi|325849320|ref|ZP_08170737.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480182|gb|EGC83251.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 321 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++++ L + F F + R + LE+ + + T++ Sbjct: 151 LNAMDFGIPQKRERIFVVSCLGAN-NFSFNKLERKETRPLSEFLEKDVSELYTMTQPYM- 208 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 K NK F L + T+S Sbjct: 209 ----LKFLNKGIDNSFRGRLKVIKD-FSYTIS 235 >gi|319645695|ref|ZP_07999926.1| DNA-cytosine methyltransferase [Bacillus sp. BT1B_CT2] gi|317392242|gb|EFV73038.1| DNA-cytosine methyltransferase [Bacillus sp. BT1B_CT2] Length = 327 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 35/94 (37%), Gaps = 5/94 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP-LGIKPRLGDILEEHIDDKSTISNKLWE 59 + A DFGVPQRRER++ I L + F F + + LE ++ + N Sbjct: 147 LNAMDFGVPQRRERVFTISIL-GNKAFNFSKLNRKTAQHIKEFLEGNVTAPQYMIN--IP 203 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 R E Y + T+S R Sbjct: 204 SMLNRIEEFNPNADE-KYRYLDVIEDSCWTISTR 236 >gi|205360554|ref|ZP_02684441.2| modification methylase DdeI [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205348823|gb|EDZ35454.1| modification methylase DdeI [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 394 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 10/90 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG---------IKPRLGDILEEHIDDKS 51 +++ DFGVPQ R+RL+II FP P P L D + + + Sbjct: 156 LESTDFGVPQIRKRLFIIASRKELKN-PFPKPTHNITGSDGLKKTPTLWDAISDLPQINA 214 Query: 52 TISNKLWEGHQKRKENNKIAGKGFGYGLFF 81 ++ + ++ + + + + + Sbjct: 215 REGSEEMDYDKQALTDYQKQLRENSHKISN 244 >gi|238922582|ref|YP_002936095.1| cytosine-specific methyltransferase [Eubacterium rectale ATCC 33656] gi|238874254|gb|ACR73961.1| cytosine-specific methyltransferase [Eubacterium rectale ATCC 33656] Length = 443 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIK 36 + + D+GVPQ RER++++ E K P P Sbjct: 164 LNSADYGVPQVRERVFVVAIKGDEGKEIKLPNPTHRN 200 >gi|209525305|ref|ZP_03273847.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209494320|gb|EDZ94633.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 342 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 36/99 (36%), Gaps = 14/99 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT------PLGIKPRLGDILEEHIDDKSTIS 54 + A ++GVPQ+RERL+++ + + +P P + D ++ Sbjct: 162 INAVNYGVPQKRERLFVVAY---QTAWHWPEAETLAMPYTAGDAIYDTASTIPIGAKFLT 218 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + E + + +K Y TL+ R Sbjct: 219 PSMLEYIGRYEAKSKCVKPREIY-----LDIPCRTLTCR 252 >gi|325298663|ref|YP_004258580.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170] gi|324318216|gb|ADY36107.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170] Length = 463 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKP 37 + A DF +PQ R R++++ FL + F FP PL Sbjct: 143 LNAADFRIPQDRYRVFVVGFLKDLNCNFHFPHPLQNAH 180 >gi|325846341|ref|ZP_08169331.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481605|gb|EGC84644.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 315 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++++ L + F F + R + LE+++ + T++ Sbjct: 151 LNAMDFGIPQKRERIFVVSCLGAN-NFSFNKLERKETRPLSEFLEKNVSELYTMTQPYM- 208 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 K NK F L + T+S Sbjct: 209 ----LKFLNKGIDNSFRGRLKVIKD-FSYTIS 235 >gi|257877765|ref|ZP_05657418.1| cytosine specific DNA methyltransferase [Enterococcus casseliflavus EC20] gi|257811931|gb|EEV40751.1| cytosine specific DNA methyltransferase [Enterococcus casseliflavus EC20] Length = 380 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFPT 31 + A D+GVPQ R+R++ + F F+FP Sbjct: 156 LLAADYGVPQMRKRMFFVGFRKDLNYDYFEFPK 188 >gi|161869727|ref|YP_001598894.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria meningitidis 053442] gi|161595280|gb|ABX72940.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria meningitidis 053442] Length = 374 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEE 45 +FGVPQ RER+ I+ + +F P P + +L Sbjct: 160 NFAEFGVPQFRERVLIVGVRLDTGFDFHHPEPTHGENTDYGLLPY 204 >gi|326574028|gb|EGE23977.1| DcmB [Moraxella catarrhalis CO72] Length = 337 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 12/83 (14%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 A ++GV Q R+R++ I F + F FP D+K T+ + +W+ Sbjct: 145 NAKNYGVAQERKRVFYIGFRKDLAINFNFPIGS----------TAEDDNKITLKDVIWD- 193 Query: 61 HQKRKENNKIAGKGFGYGLFFEN 83 Q+ + + Sbjct: 194 LQQTAVAALDKNQTNPKAINNNE 216 >gi|79835466|gb|ABB52093.1| Mod [Arthrospira platensis] gi|291569838|dbj|BAI92110.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39] Length = 345 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 36/99 (36%), Gaps = 14/99 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT------PLGIKPRLGDILEEHIDDKSTIS 54 + A ++GVPQ+RERL+++ + + +P P + D ++ Sbjct: 162 INAVNYGVPQKRERLFVVAY---QTAWNWPEAETLAIPYTAGDAIYDTASTIPIGAKFLT 218 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + E + + +K Y TL+ R Sbjct: 219 PSMLEYIGRYEAKSKCVKPRDIY-----LDIPCRTLTCR 252 >gi|309808410|ref|ZP_07702309.1| putative modification methylase HhaI [Lactobacillus iners LactinV 01V1-a] gi|308168238|gb|EFO70357.1| putative modification methylase HhaI [Lactobacillus iners LactinV 01V1-a] Length = 198 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDIL 43 + ++G+PQ+RER+Y++ F N F FP P + + + Sbjct: 152 LNPINYGIPQKRERVYMVCFRNDIERESFVFPQPFKLNRFVENFF 196 >gi|218249004|ref|YP_002374375.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] gi|218169482|gb|ACK68219.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] Length = 456 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 7/80 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILEEHID----DKSTI 53 + + DFG+ Q R+R++I+ F FP PL + P+L + +E K Sbjct: 173 LNSYDFGLSQDRDRVFIVGIHQQIENAAQFSFPEPLNLSPKLYEFIEGIEKQELVKKKFS 232 Query: 54 SNKLWEGHQKRKENNKIAGK 73 + L+EG Sbjct: 233 PDILFEGKIPASRGRFQKND 252 >gi|332361316|gb|EGJ39120.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus sanguinis SK1056] Length = 454 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 3/83 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF VPQ RER++II F FP I + L ++ ++ Sbjct: 151 LNSKDFQVPQNRERIFIIGHSRRYRPRFLFPLRGEISSVSLERLGNVNPSGKGMNGEV-- 208 Query: 60 GHQKRKENNKIAGKGFGYGLFFE 82 + GKG G + Sbjct: 209 YLSRGIAPTLTRGKGEGTKIAIP 231 >gi|325270471|ref|ZP_08137073.1| modification methylase DdeI [Prevotella multiformis DSM 16608] gi|324987194|gb|EGC19175.1| modification methylase DdeI [Prevotella multiformis DSM 16608] Length = 398 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 7/68 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPL-GIKPRLGDILEEHIDDK-----STIS 54 + A D+GVPQ R R + L+ + EF FP+P + + + +D + Sbjct: 202 LLASDYGVPQNRRRAIFVGMLDGT-EFVFPSPTLETPVTCKEAISDLPEDSLPEGGEYPA 260 Query: 55 NKLWEGHQ 62 + E + Sbjct: 261 DPQSEYQK 268 >gi|225075681|ref|ZP_03718880.1| hypothetical protein NEIFLAOT_00697 [Neisseria flavescens NRL30031/H210] gi|224952952|gb|EEG34161.1| hypothetical protein NEIFLAOT_00697 [Neisseria flavescens NRL30031/H210] Length = 389 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 3/77 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT--PLGIKPRLGDILEEHIDD-KSTISNKL 57 + A D+GVPQ RER+ I+ L E + + + +D + I+N + Sbjct: 239 LNAADYGVPQTRERVIIVGRLPEIPEIQIEKTNTSNSYVTARQAIGDLVDKVEDEIANHI 298 Query: 58 WEGHQKRKENNKIAGKG 74 W +K + Sbjct: 299 WSRAEKSPDQGSRKLDA 315 >gi|323955563|gb|EGB51327.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H263] Length = 126 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 15/23 (65%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + A D+GVPQ R+R++I N Sbjct: 81 LNARDYGVPQNRKRVFIAGVRND 103 >gi|261392162|emb|CAX49670.1| putative modification methylase (cytosine-specific methyltransferase) [Neisseria meningitidis 8013] gi|309378365|emb|CBX23011.1| putative DNA cytosine methyltransferase [Neisseria lactamica Y92-1009] Length = 389 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 3/77 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT--PLGIKPRLGDILEEHIDD-KSTISNKL 57 + A D+GVPQ RER+ I+ L E + + + +D + I+N + Sbjct: 239 LNAADYGVPQTRERVIIVGRLPEIPEIQIEKTNTSNSYVTARQAIGDLVDKVEDEIANHI 298 Query: 58 WEGHQKRKENNKIAGKG 74 W +K + Sbjct: 299 WSRAEKSPDQGSRKLDA 315 >gi|159122489|gb|EDP47610.1| C-5 cytosine methyltransferase DmtA [Aspergillus fumigatus A1163] Length = 628 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 35/108 (32%), Gaps = 17/108 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + D+GVPQ R RL II V FP P L T N++ Sbjct: 468 LNCMDYGVPQSRRRLIIIASGPGEVLPPFPKPTHG-------LPGSGLSDYTTINQMIAN 520 Query: 61 HQKRK-----ENNKIAGKGFGYGLFFENSATTNTLSAR-----YYKDG 98 E + G G + F+ + T++ Y+ G Sbjct: 521 IPPNAPDHDIEGARSRGLRNGTRVPFDPNQQAKTVTCSGGENNYHPSG 568 >gi|145218883|ref|YP_001129592.1| DNA-cytosine methyltransferase [Prosthecochloris vibrioformis DSM 265] gi|145205047|gb|ABP36090.1| DNA-cytosine methyltransferase [Chlorobium phaeovibrioides DSM 265] Length = 377 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 19/34 (55%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A D+G+PQRR+R I+ + P+P Sbjct: 152 LEASDYGLPQRRQRTIIVGWKKHLPAVSLPSPTH 185 >gi|265751236|ref|ZP_06087299.1| DcmB protein [Bacteroides sp. 3_1_33FAA] gi|270294601|ref|ZP_06200803.1| DNA-cytosine methyltransferase [Bacteroides sp. D20] gi|263238132|gb|EEZ23582.1| DcmB protein [Bacteroides sp. 3_1_33FAA] gi|270276068|gb|EFA21928.1| DNA-cytosine methyltransferase [Bacteroides sp. D20] Length = 466 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKP 37 + A D+ +PQ R R++++ FL + F FP P G Sbjct: 143 LNAADYYIPQDRYRVFVVGFLKELNCTFNFPKPFGKPY 180 >gi|226349837|ref|YP_002776950.1| modification methylase [Rhodococcus opacus B4] gi|226245752|dbj|BAH47019.1| modification methylase [Rhodococcus opacus B4] Length = 428 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 1 MKACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLGIKPRLGDILEEHI 47 ++A D+GVPQ R R ++ + F +P + +G L++ + Sbjct: 158 LQASDYGVPQLRPRFVLVALRQEDAAYFHWPEKTPTQDTVGSALKDLM 205 >gi|282883032|ref|ZP_06291633.1| type II restriction-modification system methylation subunit [Peptoniphilus lacrimalis 315-B] gi|281297089|gb|EFA89584.1| type II restriction-modification system methylation subunit [Peptoniphilus lacrimalis 315-B] Length = 312 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++++ L + F F + R + LE+++ + T++ Sbjct: 151 LNAVDFGIPQKRERIFVVSCLGAN-NFSFNKLERKETRPLSEFLEKNVSELYTMTQPYM- 208 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 K NK F L + T+S Sbjct: 209 ----LKFLNKGIDNSFRGRLKVIKD-FSYTIS 235 >gi|322510870|gb|ADX06184.1| putative C-5 cytosine-specific DNA methyltransferase [Organic Lake phycodnavirus 1] Length = 465 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHI 47 + A + VPQ+RER++I+ N F+FP K L D+L Sbjct: 288 LDASKYDVPQKRERVFIVGVLKNIDRSFEFPNESLTKKVLKDVLYNVP 335 >gi|269986305|gb|EEZ92611.1| DNA-cytosine methyltransferase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 349 Score = 51.9 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 3/35 (8%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKF--PTPLG 34 A ++GVPQ R+R+ I+ + + F F P P Sbjct: 145 DARNYGVPQERKRVIIVGYRKD-IGFSFLPPEPTH 178 >gi|70984380|ref|XP_747703.1| C-5 cytosine methyltransferase DmtA [Aspergillus fumigatus Af293] gi|66845330|gb|EAL85665.1| C-5 cytosine methyltransferase DmtA [Aspergillus fumigatus Af293] Length = 628 Score = 51.9 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 35/108 (32%), Gaps = 17/108 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + D+GVPQ R RL II V FP P L T N++ Sbjct: 468 LNCMDYGVPQSRRRLIIIASGPGEVLPPFPKPTHG-------LPGSGLSDYTTINQMIAN 520 Query: 61 HQKRK-----ENNKIAGKGFGYGLFFENSATTNTLSAR-----YYKDG 98 E + G G + F+ + T++ Y+ G Sbjct: 521 IPPNAPDHDIEGARSRGLRNGTRVPFDPNQQAKTVTCSGGENNYHPSG 568 >gi|159477138|ref|XP_001696668.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas reinhardtii] gi|158282893|gb|EDP08645.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas reinhardtii] Length = 1263 Score = 51.9 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 21/36 (58%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK 36 + A ++GVPQ R+R++II L V +P P+ Sbjct: 916 LNAGNYGVPQSRKRMFIIAALPEEVLPNWPRPMHSF 951 >gi|121635255|ref|YP_975500.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis FAM18] gi|313668027|ref|YP_004048311.1| C-5 cytosine-specific DNA methylase [Neisseria lactamica ST-640] gi|120866961|emb|CAM10721.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis FAM18] gi|313005489|emb|CBN86924.1| C-5 cytosine-specific DNA methylase [Neisseria lactamica 020-06] Length = 383 Score = 51.9 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 3/77 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT--PLGIKPRLGDILEEHIDD-KSTISNKL 57 + A D+GVPQ RER+ I+ L E + + + +D + I+N + Sbjct: 233 LNAADYGVPQTRERVIIVGRLPEIPEIQIEKTNTSNSYVTARQAIGDLVDKVEDEIANHI 292 Query: 58 WEGHQKRKENNKIAGKG 74 W +K + Sbjct: 293 WSRAEKSPDQGSRKLDA 309 >gi|322514130|ref|ZP_08067198.1| modification methylase NgoPII [Actinobacillus ureae ATCC 25976] gi|322120016|gb|EFX92002.1| modification methylase NgoPII [Actinobacillus ureae ATCC 25976] Length = 356 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPL----GIKPRLGDILEEHID 48 A D+GV Q R+R++ I + ++F+FP K L DI+ + D Sbjct: 145 NAKDYGVAQERKRVFYIGYRKDLGIDFEFPVGSTIDDDKKISLKDIIWDLKD 196 >gi|251811836|ref|ZP_04826309.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis BCM-HMP0060] gi|282875124|ref|ZP_06283997.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis SK135] gi|251804633|gb|EES57290.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis BCM-HMP0060] gi|281295889|gb|EFA88410.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis SK135] Length = 329 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 6/88 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID----DKSTISNK 56 ++ D+ +PQ+R+R++I+ + N +EF +P L K + + + + +KS I N Sbjct: 153 LQTSDYNIPQKRQRVFIVGYKN--IEFNYPEKLKRKVTIKEAISDLPPLKNGEKSKIPNH 210 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENS 84 H + G L Sbjct: 211 FAMNHSQEMLYKMSFISDGGNRLQIPEE 238 >gi|257060181|ref|YP_003138069.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] gi|256590347|gb|ACV01234.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] Length = 336 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A DF +P +RER++I+ F ++F + + L ILE ++ S ++ Sbjct: 167 LNALDFALPHKRERIFIVGFR-DPLQFTWKNSIIPMKSLEKILENNVAQSYYASQQI 222 >gi|254805366|ref|YP_003083587.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] gi|254668908|emb|CBA07091.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] gi|308389730|gb|ADO32050.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis alpha710] Length = 389 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 3/77 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT--PLGIKPRLGDILEEHIDD-KSTISNKL 57 + A D+GVPQ RER+ I+ L E + + + +D + I+N + Sbjct: 239 LNAADYGVPQTRERVIIVGRLPEIPEIQIEKTNTSNSYVTARQAIGDLVDKVEDEIANHI 298 Query: 58 WEGHQKRKENNKIAGKG 74 W +K + Sbjct: 299 WSRAEKSPDQGSRKLDA 315 >gi|315654722|ref|ZP_07907628.1| modification methylase NgoPII [Mobiluncus curtisii ATCC 51333] gi|315491186|gb|EFU80805.1| modification methylase NgoPII [Mobiluncus curtisii ATCC 51333] Length = 360 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 12/83 (14%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 A ++GV + R+R++ I F +++F FP E K T+ + +W+ Sbjct: 154 NAKNYGVAEERKRVFYIGFRKDLNIDFVFPKGS----------TEDDAKKITLRDVIWD- 202 Query: 61 HQKRKENNKIAGKGFGYGLFFEN 83 Q+ + + Sbjct: 203 LQETAVPAAEKNRHNPEAINNNE 225 >gi|254470861|ref|ZP_05084264.1| DNA-cytosine methyltransferase [Pseudovibrio sp. JE062] gi|211960003|gb|EEA95200.1| DNA-cytosine methyltransferase [Pseudovibrio sp. JE062] Length = 498 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLG 34 + A +GVPQ RER++++ + + FP P Sbjct: 183 LNAAYYGVPQMRERMFLLAYRREITDSIVFPKPTH 217 >gi|145294975|ref|YP_001137796.1| hypothetical protein cgR_0920 [Corynebacterium glutamicum R] gi|140844895|dbj|BAF53894.1| hypothetical protein [Corynebacterium glutamicum R] Length = 331 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 19/38 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 ++A +FGVPQ R+RL +I +P P + Sbjct: 129 LQAAEFGVPQSRKRLVLIGARKDVPLPVYPEPTHSARK 166 >gi|227539355|ref|ZP_03969404.1| possible DNA (cytosine-5-)-methyltransferase [Sphingobacterium spiritivorum ATCC 33300] gi|227240668|gb|EEI90683.1| possible DNA (cytosine-5-)-methyltransferase [Sphingobacterium spiritivorum ATCC 33300] Length = 386 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 18/40 (45%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG 40 + + DFGVPQ RER++ + ++ K P Sbjct: 171 LNSLDFGVPQHRERIFFVGIRRKILDKKIVEPSSFGKWFP 210 >gi|323485262|ref|ZP_08090612.1| cytosine-specific methyltransferase [Clostridium symbiosum WAL-14163] gi|323401440|gb|EGA93788.1| cytosine-specific methyltransferase [Clostridium symbiosum WAL-14163] Length = 335 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 11/94 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + D+G+PQ RER + + L + +F+ +K + + D ++ Sbjct: 167 LDCRDYGIPQARERCFTVSILGDNAFDFELMEKRPMKNISNFLEYGDVPDCYLVTQPSVY 226 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 +K G NT++ R Sbjct: 227 SVIGKK----------GIRRATIIKDYVNTITTR 250 >gi|224418258|ref|ZP_03656264.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter canadensis MIT 98-5491] gi|253827583|ref|ZP_04870468.1| putative methylase [Helicobacter canadensis MIT 98-5491] gi|313141791|ref|ZP_07803984.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis MIT 98-5491] gi|253510989|gb|EES89648.1| putative methylase [Helicobacter canadensis MIT 98-5491] gi|313130822|gb|EFR48439.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis MIT 98-5491] Length = 589 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 2/43 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 + A +GVPQ RER++ I FP + D + Sbjct: 152 LNAKHYGVPQNRERVFFIAHKERL--LSFPKESNCLVSVKDAI 192 >gi|207108548|ref|ZP_03242710.1| type II DNA modification enzyme [Helicobacter pylori HPKX_438_CA4C1] Length = 171 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLGIKPRLGDILEEHID 48 + + DF + Q RERLYI+ F F FP L D L+ + Sbjct: 99 LNSADFQLAQNRERLYIVGFRKDLKHHFVFPLGLANDYHFEDFLDADNE 147 >gi|119467548|ref|XP_001257580.1| C-5 cytosine methyltransferase DmtA [Neosartorya fischeri NRRL 181] gi|119405732|gb|EAW15683.1| C-5 cytosine methyltransferase DmtA [Neosartorya fischeri NRRL 181] Length = 632 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 7/103 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + D+GVPQ R RL II V FP P P G L ++ I+N + Sbjct: 468 LNCMDYGVPQSRRRLIIIASGPGEVLPPFPKPTHGLP--GSGLSDYTTINQMIANIPPDA 525 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSAR-----YYKDG 98 E + G G + F+ + T++ Y+ G Sbjct: 526 PDHDIEGARSRGLRNGTRVPFDPNQQAKTVTCSGGENNYHPSG 568 >gi|88854619|ref|ZP_01129286.1| C-5 cytosine-specific DNA methylase family protein [marine actinobacterium PHSC20C1] gi|88816427|gb|EAR26282.1| C-5 cytosine-specific DNA methylase family protein [marine actinobacterium PHSC20C1] Length = 352 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 17/34 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 + A D+G PQ R+R II L FPTP Sbjct: 144 LNAADYGAPQARKRAVIIGHLKTLPFPGFPTPTH 177 >gi|79835453|gb|ABB52085.1| Mod [Arthrospira platensis] gi|291569776|dbj|BAI92048.1| type II DNA modification methyltransferase [Arthrospira platensis NIES-39] Length = 429 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 5/86 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G+PQ R+RL+I+ FP P ++ ++ LWE Sbjct: 192 LNATDYGIPQVRKRLFILAHRCDLTH-PFPQPTHTTSNQTELFTHNLKKC----PSLWEA 246 Query: 61 HQKRKENNKIAGKGFGYGLFFENSAT 86 + + G + Sbjct: 247 ISDLPDIDAGEGAEEMEYNKCPDHEY 272 >gi|283783021|ref|YP_003373775.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05] gi|283441534|gb|ADB14000.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05] Length = 357 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFGVPQ R+R II +N V P+ L K + D + + +S +++ E Sbjct: 150 LNAADFGVPQNRKRAVIIGKMNG-VAPSLPSSLNEKVTIWDAISDLAFLESGEGDEVQEY 208 Query: 61 HQKRKENNKIAGKGFGYGLFF 81 + + +G L+ Sbjct: 209 RYAPQSEYEKKLRGHANLLYN 229 >gi|172036128|ref|YP_001802629.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142] gi|171697582|gb|ACB50563.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142] Length = 349 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 13/101 (12%) Query: 1 MKACDFGVPQRRERLYIIDF----LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A F +PQ RER+Y++ F L V+F FP D E + +IS Sbjct: 180 LDAALFDLPQVRERIYLVGFCREYLKERVDFTFPMGQTNDV-YIDRFIEKNIEGYSISKH 238 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSAT-TNTLSARYYK 96 L + + +K++ + + + S T + Y+K Sbjct: 239 LQQSYLFKKDDGRP-------QIVDQTSQVKVKTFVSTYHK 272 >gi|309776146|ref|ZP_07671137.1| CPG DNA methylase [Erysipelotrichaceae bacterium 3_1_53] gi|308916097|gb|EFP61846.1| CPG DNA methylase [Erysipelotrichaceae bacterium 3_1_53] Length = 456 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 5/80 (6%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTIS----NKL 57 A D G+PQ RER ++I L ++FP + ++ D+LEE +D + + Sbjct: 225 DAADHGIPQHRERCFMISILGEY-SYRFPAGRKLHIQMKDLLEEKVDIRYFQTYRSVCNF 283 Query: 58 WEGHQKRKENNKIAGKGFGY 77 H++++ + Sbjct: 284 LTSHKEKEIGAQPTLDKGAM 303 >gi|462647|sp|P34905|MTB1_BREBE RecName: Full=Modification methylase BbvI; Short=M.BbvI; AltName: Full=Cytosine-specific methyltransferase BbvI Length = 374 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%) Query: 5 DFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKP--RLGDILEEHIDD 49 ++GVPQRR R+ I+ V F+ P P + + L + +D Sbjct: 170 EYGVPQRRHRIIIVGIRKDQDVAFRVPEPTHKEKYRTASEALADIPED 217 >gi|322411604|gb|EFY02512.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 451 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 3/83 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF VPQ RER++II F FP + L ++ ++ Sbjct: 148 LNSKDFQVPQNRERIFIIGHSRRYRPRFLFPLRGENSSASLERLGNVNPSGKGMNGEV-- 205 Query: 60 GHQKRKENNKIAGKGFGYGLFFE 82 + GKG G + Sbjct: 206 YLSRGIAPTLTRGKGEGTKIAIP 228 >gi|110765384|ref|XP_001122269.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Apis mellifera] Length = 1427 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 30/65 (46%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++A ++G+PQ R RL I+ V K+P P + + L +D+K SN W Sbjct: 1116 LQAGNYGIPQTRRRLIILAAAPGEVLPKYPEPTHVFSKRACQLSVIVDNKKYSSNCDWTE 1175 Query: 61 HQKRK 65 + Sbjct: 1176 SAPYR 1180 >gi|308061739|gb|ADO03627.1| DNA-cytosine methyltransferase [Helicobacter pylori Cuz20] Length = 704 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 33/90 (36%), Gaps = 7/90 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF-PTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A +F VPQ RER+ I+ +L V F F P + + L DKS L Sbjct: 143 LNAKNFSVPQNRERIIIVGYLGSQV-FDFNPIKTNPITDMQNFL-----DKSGHFEILEP 196 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 +N + + G + T Sbjct: 197 YEYTLLDNQLLKRQNSGLIFCGYRNKKIRT 226 >gi|1709155|sp|P50196|MTE8_ECOLX RecName: Full=Modification methylase Eco47II; Short=M.Eco47II; AltName: Full=Cytosine-specific methyltransferase Eco47II gi|558571|emb|CAA57629.1| site-specific DNA-methyltransferase (cytosine-specific) [Escherichia coli] gi|1098127|prf||2115269B methyltransferase Eco47IIM Length = 417 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 3/87 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS---VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 +KA + VPQ+RERL I+ N +++++P+ L D L++ S + Sbjct: 225 LKAIFYKVPQKRERLIIVAVRNDLADGIDYEWPSSYNKILTLKDALKKGELYDSDVPESE 284 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENS 84 + + KRK GY Sbjct: 285 GQKYPKRKAEILSMVPPGGYWRDLPED 311 >gi|325270791|ref|ZP_08137382.1| modification methylase Eco47II [Prevotella multiformis DSM 16608] gi|324986907|gb|EGC18899.1| modification methylase Eco47II [Prevotella multiformis DSM 16608] Length = 437 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 5/102 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLGDILEEHID-DKSTISNK 56 +KA + VPQ+RERL+++ N V F++P+P L D + S++ Sbjct: 217 LKAVMYKVPQKRERLFLVALRNDLSGHVTFRWPSPYHRIMTLRDAFFKGDLFSCDVPSSE 276 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 ++++ ++ +G + E + A YY G Sbjct: 277 GQAYPERKRRVLELVPEGQDWRSLPEKEQKAY-MGASYYLGG 317 >gi|50949214|emb|CAF31654.1| putative C5-methyltransferase [Cloning vector pGID052] Length = 307 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 7/90 (7%) Query: 2 KACDFGVPQRRERLYIID--FLNPSVEF----KFPTPLGIKPRLGDI-LEEHIDDKSTIS 54 A D+GVPQ RER++++ +F KFP P + L + L++ I D + Sbjct: 218 NARDYGVPQSRERVFLVGTNIKKVKQKFDWKYKFPNPTHGEKLLPYVTLKDAIGDLPSSP 277 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENS 84 ++EG ++ K + F S Sbjct: 278 PDVFEGAFSPIFMSRNRKKSWNEQSFTIRS 307 >gi|260913722|ref|ZP_05920198.1| modification methylase NgoPII [Pasteurella dagmatis ATCC 43325] gi|260632261|gb|EEX50436.1| modification methylase NgoPII [Pasteurella dagmatis ATCC 43325] Length = 329 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 12/83 (14%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 A D+GV Q R+R++ I F S+ F+FP + +DK T+ + +W+ Sbjct: 145 NAKDYGVAQERKRVFYIGFRKDLSISFQFPIGS----------TVNDEDKITLKDIIWD- 193 Query: 61 HQKRKENNKIAGKGFGYGLFFEN 83 Q+ K + Sbjct: 194 LQETAVPALAQNKSNPQAVNNNE 216 >gi|229187780|ref|ZP_04314910.1| Cytosine-specific methyltransferase [Bacillus cereus BGSC 6E1] gi|228595683|gb|EEK53373.1| Cytosine-specific methyltransferase [Bacillus cereus BGSC 6E1] Length = 365 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 12/23 (52%), Positives = 16/23 (69%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + + DFGVPQ RER++II L Sbjct: 150 LNSKDFGVPQNRERVFIIGHLRG 172 >gi|50914489|ref|YP_060461.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS10394] gi|50903563|gb|AAT87278.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS10394] Length = 422 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 30/97 (30%), Gaps = 4/97 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + D+GVPQ RER+Y I L + P L ++ + ++ + Sbjct: 152 NSKDYGVPQNRERVYTIGHLRSRGRRQVLPLQPESSGNLKQLVGGMQSYRVYDTDGISTT 211 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATT---NTLSARY 94 + T ++ARY Sbjct: 212 LVGTGGGVGAKTGLYLIDQSTTKPKVTDQARCITARY 248 >gi|17548155|ref|NP_521557.1| DNA modification cytosine-specific methyltransferase [Ralstonia solanacearum GMI1000] gi|17430462|emb|CAD16935.1| probable site-specific dna methylase protein [Ralstonia solanacearum GMI1000] Length = 364 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 26/70 (37%), Gaps = 3/70 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKF--PTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A ++ VPQ RERL ++ F + + P P + + + + + N Sbjct: 154 LNAANYSVPQNRERLIMVGFNRDLYPDLTWLPPGPKNARLTVREAIGALPEPTYFQRNLT 213 Query: 58 WEGHQKRKEN 67 + + Sbjct: 214 NKDIPHHPNH 223 >gi|325132717|gb|EGC55400.1| DNA-cytosine methyltransferase [Neisseria meningitidis M6190] gi|325136737|gb|EGC59337.1| DNA-cytosine methyltransferase [Neisseria meningitidis M0579] gi|325138603|gb|EGC61162.1| DNA-cytosine methyltransferase [Neisseria meningitidis ES14902] gi|325142796|gb|EGC65168.1| DNA-cytosine methyltransferase [Neisseria meningitidis 961-5945] gi|325198710|gb|ADY94166.1| DNA-cytosine methyltransferase [Neisseria meningitidis G2136] gi|325201728|gb|ADY97182.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240149] gi|325204572|gb|ADZ00026.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240355] gi|325208528|gb|ADZ03980.1| DNA-cytosine methyltransferase [Neisseria meningitidis NZ-05/33] Length = 316 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 3/77 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT--PLGIKPRLGDILEEHIDD-KSTISNKL 57 + A D+GVPQ RER+ I+ L E + + + +D + I+N + Sbjct: 166 LNAADYGVPQTRERVIIVGRLPEIPEIQIEKTNTSNSYVTARQAIGDLVDKVEDEIANHI 225 Query: 58 WEGHQKRKENNKIAGKG 74 W +K + Sbjct: 226 WSRAEKSPDQGSRKLDA 242 >gi|319746106|gb|EFV98380.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus agalactiae ATCC 13813] Length = 458 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 28/83 (33%), Gaps = 3/83 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF VPQ RER++II F FP + L ++ ++ Sbjct: 151 LNSKDFQVPQNRERIFIIGHSRRYCSRFLFPLRRESSSTGLERLGNINPSGKGMNGEV-- 208 Query: 60 GHQKRKENNKIAGKGFGYGLFFE 82 GKG G + Sbjct: 209 YLTSGLAPTLTRGKGEGTKIAIP 231 >gi|213863400|ref|ZP_03386655.1| C-5 cytosine-specific DNA methylase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 60 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDIL 43 + + DF VPQ RER++II F FP P + L Sbjct: 16 LNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLRRENSPAHLERL 59 >gi|317010127|gb|ADU80707.1| DNA-cytosine methyltransferase [Helicobacter pylori India7] Length = 703 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF-PTPLGIKPRLGDILEE 45 + A DF VPQ RER+ I+ +L V F F P + + L++ Sbjct: 143 LNAKDFSVPQNRERIIIVGYLGSQV-FDFNPIKKNPIISMQNFLDK 187 >gi|284050355|ref|ZP_06380565.1| site-specific DNA-methyltransferase [Arthrospira platensis str. Paraca] Length = 371 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDD 49 + A D+G+PQ R+RL+I+ FP P ++ ++ Sbjct: 151 LNATDYGIPQVRKRLFILAHRCDLTH-PFPQPTHTTSNQTELFTHNLKK 198 >gi|255520393|ref|ZP_05387630.1| C-5 cytosine-specific DNA methylase [Listeria monocytogenes FSL J1-175] Length = 451 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + ++GVPQ RER++II L + + FP + + ++ D K ++ Sbjct: 149 NSKNYGVPQNRERVFIIGHLRGAGGREIFPLGGENRTFNKNDIKAINDSKKVREQLKFDS 208 Query: 61 H 61 Sbjct: 209 L 209 >gi|207091758|ref|ZP_03239545.1| putative site-specific DNA-methyltransferase [Helicobacter pylori HPKX_438_AG0C1] Length = 703 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF-PTPLGIKPRLGDILEE 45 + A DF VPQ RER+ I+ +L V F F P + + L++ Sbjct: 143 LNAKDFSVPQNRERIIIVGYLGSQV-FDFNPIKKNPIISMQNFLDK 187 >gi|325478388|gb|EGC81503.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus prevotii ACS-065-V-Col13] Length = 321 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 10/93 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++++ L + F F + R + LE + + T++ Sbjct: 151 LNAMDFGIPQKRERIFVVSCLGAN-NFSFNKLERKETRPLSEFLENDVSELYTMT----- 204 Query: 60 GHQKRKENNKIA-GKGFGYGLFFENSATTNTLS 91 Q G A + T+S Sbjct: 205 --QPYMLKFLNKGIDNSFRGRLKVIKAFSYTIS 235 >gi|332523411|ref|ZP_08399663.1| modification methylase HpaII [Streptococcus porcinus str. Jelinkova 176] gi|332314675|gb|EGJ27660.1| modification methylase HpaII [Streptococcus porcinus str. Jelinkova 176] Length = 451 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFP 30 + + DF VPQ RER++II F FP Sbjct: 148 LNSKDFQVPQNRERIFIIGHSRRFRPRFLFP 178 >gi|159025987|emb|CAO87894.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 329 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 27/78 (34%), Gaps = 3/78 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + + F +PQ R R +++ F F+FP P + + I+ D IS K Sbjct: 142 IDSKYFQIPQSRPRFFLLAFRKDLGIKNFQFPQPCHAEVGIEKIIVPG-DYSIPISEKWQ 200 Query: 59 EGHQKRKENNKIAGKGFG 76 + F Sbjct: 201 QYIDYYAGRITAEQLSFQ 218 >gi|330997449|ref|ZP_08321300.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT 11841] gi|329570823|gb|EGG52539.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT 11841] Length = 357 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTP---LGIKPRLGDILEEHIDDKSTISNKLWE 59 A D+GVPQ R+RL I + ++FP P D + + T+ ++ + Sbjct: 156 AADYGVPQIRKRLVFIGLRDSKASYEFPVPYRLPDNYLTCEDAISDLPALVDTLGEEVGK 215 Query: 60 GHQKRKENNKIAGKGFGYGLFF 81 + + + +G L+ Sbjct: 216 YEMEPLNDFQKLMRGACTTLYN 237 >gi|7243959|gb|AAB21481.2| cytosine DNA methyltransferase homolog [Neisseria gonorrhoeae] Length = 347 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKP 37 +FGVPQ RER+ I+ + +F+ P P + Sbjct: 160 NFAEFGVPQFRERVLIVGVRLDTGFDFRHPEPTHNET 196 >gi|331002097|ref|ZP_08325616.1| hypothetical protein HMPREF0491_00478 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411191|gb|EGG90607.1| hypothetical protein HMPREF0491_00478 [Lachnospiraceae oral taxon 107 str. F0167] Length = 706 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT-PLGIKPRLGDILEEHIDDKSTISNKL 57 + A +FGVPQ RER+ I+ ++ + F F + + L++ D + + Sbjct: 147 LNARNFGVPQNRERIIIVGNIDGRI-FDFTKLKMNTVETMKPFLDKAADFEILPRDSY 203 >gi|86360841|ref|YP_472728.1| DNA (cytosine-5-)-methyltransferase protein [Rhizobium etli CFN 42] gi|86284943|gb|ABC94001.1| probable DNA (cytosine-5-)-methyltransferase protein [Rhizobium etli CFN 42] Length = 504 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLG 34 + A +GVPQ RER+ +I + +FP P Sbjct: 186 LNAAFYGVPQMRERMILIAIRKELADDVEFPAPTH 220 >gi|282897137|ref|ZP_06305139.1| C-5 cytosine-specific DNA methylase [Raphidiopsis brookii D9] gi|281197789|gb|EFA72683.1| C-5 cytosine-specific DNA methylase [Raphidiopsis brookii D9] Length = 435 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 18/38 (47%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 + A DFGV Q R RL ++ + + +P L K Sbjct: 164 LNAADFGVAQNRSRLILLGWRKDMPKPVYPETLFEKTT 201 >gi|283834911|ref|ZP_06354652.1| C-5 cytosine-specific DNA methylase family protein [Citrobacter youngae ATCC 29220] gi|291069174|gb|EFE07283.1| C-5 cytosine-specific DNA methylase family protein [Citrobacter youngae ATCC 29220] Length = 400 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 2/87 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A D+GVPQ R R++I+ + E +P + + S+ + Sbjct: 171 LNAKDYGVPQNRNRVFILGLRSDVNIGEVTWPPVSTHFKDKKPQWKNSSEVFERPSSDII 230 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSA 85 + + A F S Sbjct: 231 RKIENKIGAESTANLIFYKKRSDTCSD 257 >gi|27733906|ref|NP_775697.1| putative C5-methyltransferase [Leuconostoc citreum] gi|27552370|emb|CAD38156.1| putative C5-methyltransferase [Leuconostoc citreum] Length = 403 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 2 KACDFGVPQRRERLYIID--FLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 A D+GVPQ RER++++ +F + P G+ L ++ K I + Sbjct: 218 NARDYGVPQSRERVFLVGTNIKKVKQKFDW-KYKFPNPTHGEKLLPYVTLKDAIGD 272 >gi|240047747|ref|YP_002961135.1| Cytosine-specific methyltransferase [Mycoplasma conjunctivae HRC/581] gi|239985319|emb|CAT05332.1| Cytosine-specific methyltransferase [Mycoplasma conjunctivae] Length = 211 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 38/103 (36%), Gaps = 11/103 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDD----------K 50 + + DFG Q R+R++++ +L + +F++P + L IL+ K Sbjct: 35 LNSADFGSSQNRQRVFMVSWLT-NKKFEWPATIKHNNNLKKILDLTHLPNEENLASKIFK 93 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 +++ +K K + TL+A Sbjct: 94 YQLTSPRITNSSIKKREIINFTKFNSENYIYYPDFFGPTLTAS 136 >gi|255608013|ref|XP_002538828.1| cytosine-specific methyltransferase, putative [Ricinus communis] gi|223510238|gb|EEF23555.1| cytosine-specific methyltransferase, putative [Ricinus communis] Length = 209 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 37/103 (35%), Gaps = 16/103 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFP----------TPLGIKPRLGDILEEHIDDK 50 + A DFGVPQ R RL ++ L P + RL +I +D Sbjct: 29 LDAADFGVPQHRRRLIVVAGLGWKPTLPVPLEGRALVSAKEAISNLTRLKNIANHEPNDH 88 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + W+ ++ + + + G + + + T+ A Sbjct: 89 APHVVARWKKLKEGEVDP-----NYRRGRIY-SDRPSPTIRAG 125 >gi|163937935|ref|YP_001642821.1| DNA-cytosine methyltransferase [Bacillus weihenstephanensis KBAB4] gi|163865790|gb|ABY46846.1| DNA-cytosine methyltransferase [Bacillus weihenstephanensis KBAB4] Length = 444 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 27/83 (32%), Gaps = 28/83 (33%) Query: 1 MKACDFGVPQRRERLYIIDFLNP----------------------------SVEFKFPTP 32 + + F V Q RER++++ S F FP Sbjct: 185 INSKYFDVAQNRERIFVVCVRKDLVQSEEWRIKGKNVVANCKRNLLNLGVQSFNFDFPAQ 244 Query: 33 LGIKPRLGDILEEHIDDKSTISN 55 + L DILEE +D + I Sbjct: 245 EDVNVSLIDILEESVDKRFYIKE 267 >gi|305666023|ref|YP_003862310.1| putative DNA modification methylase [Maribacter sp. HTCC2170] gi|88710798|gb|EAR03030.1| putative DNA modification methylase (N.MgoV) [Maribacter sp. HTCC2170] Length = 493 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 9/87 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + + D+G+PQ R R+YII F + FK P +L LE+ + Sbjct: 145 INSHDYGLPQNRIRVYIIGFKDKRYLDSFKLPDKPLNGHKLFQHLEDLPKPQF------- 197 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSA 85 + + F F + Sbjct: 198 KKKKINPTILFGKNVPFSRTKFQKKDE 224 >gi|269129048|ref|YP_003302418.1| DNA-cytosine methyltransferase [Thermomonospora curvata DSM 43183] gi|268314006|gb|ACZ00381.1| DNA-cytosine methyltransferase [Thermomonospora curvata DSM 43183] Length = 418 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKP-RLGDILEEHIDDKSTISNKLW 58 ++A D+GV Q R R ++ F +P P +P +GD+L + + + W Sbjct: 148 LQASDYGVSQLRPRFVLVAMRPEDFSYFHWPEPGKKQPKTVGDLLHDQMASRGWRGADTW 207 >gi|168494837|ref|ZP_02718980.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] gi|168494899|ref|ZP_02719042.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] gi|168494952|ref|ZP_02719095.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] gi|168494999|ref|ZP_02719142.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] gi|183575153|gb|EDT95681.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] gi|183575203|gb|EDT95731.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] gi|183575231|gb|EDT95759.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] gi|183575300|gb|EDT95828.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] Length = 360 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 37/124 (29%), Gaps = 25/124 (20%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILE---------EHIDDK 50 + + +FGVPQ RER++II FP + + ++ + Sbjct: 147 LNSKNFGVPQNRERVFIIGHLRRERTRRIFPLSGKNQSTSNQSVMKIGNINPSGNGMNGE 206 Query: 51 STISNKLWEGHQKRKENNKIAG--------------KGFGYGLFFENSATTNTLSARYYK 96 ++ L K + G+ +E T+ A Y Sbjct: 207 VYQADGLAPTLTTNKGEGQKIAIKSNTIKQFGVLQPNFNQCGVVYETDGIAPTIRA-YQG 265 Query: 97 DGSE 100 G E Sbjct: 266 GGLE 269 >gi|323703857|ref|ZP_08115492.1| DNA-cytosine methyltransferase [Desulfotomaculum nigrificans DSM 574] gi|323531175|gb|EGB21079.1| DNA-cytosine methyltransferase [Desulfotomaculum nigrificans DSM 574] Length = 409 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 5/90 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTP---LGIKPRLGDILEEHIDDKSTISN- 55 + A D+GVPQ+R R++II + F FPT + + + L + D + Sbjct: 186 LCAADYGVPQKRYRIFIIGRRDGKLPGFPFPTHANNPELSLKYFNTLCKSQDAFFPYTEL 245 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFFENSA 85 K W ++ Y + S Sbjct: 246 KKWVTVKEAFSKLTDKDYSKEYNYYANLSP 275 >gi|311977248|gb|ADQ20503.1| M.BbvI [Brevibacillus brevis] Length = 367 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%) Query: 5 DFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKP--RLGDILEEHIDD 49 ++GVPQRR R+ I+ V F+ P P + + L + +D Sbjct: 170 EYGVPQRRHRIIIVGIRKDQDVAFRVPEPTHKEKYRTASEALADIPED 217 >gi|307290179|ref|ZP_07570098.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0411] gi|306498807|gb|EFM68305.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0411] Length = 416 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 25/115 (21%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FP-------------TPLGIKPRLGDILEEH 46 + + D+ VPQ RER++II L K FP P+ + ++L Sbjct: 147 LNSKDY-VPQNRERVFIIGHLRGKCTRKVFPFERKNGTTAKNNIKPINNSKKTRELLNFD 205 Query: 47 IDDKSTISNKLWEGH-------QKRKENNKIAGKGFGYGL---FFENSATTNTLS 91 ++ N + ++ K G G+ + + TL+ Sbjct: 206 STNRFYDVNGISPCLNTMQGGDREPKIAVVGNVNPSGSGMNGQVYSSDGLAPTLT 260 >gi|221232312|ref|YP_002511465.1| DNA methylase [Streptococcus pneumoniae ATCC 700669] gi|220674773|emb|CAR69346.1| putative DNA methylase [Streptococcus pneumoniae ATCC 700669] Length = 369 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFP 30 + + +FGVPQ RER++II S FP Sbjct: 131 LNSKNFGVPQNRERVFIIGHLRGGSGRKVFP 161 >gi|119484300|ref|ZP_01618917.1| modification methylase NlaIV [Lyngbya sp. PCC 8106] gi|119457774|gb|EAW38897.1| modification methylase NlaIV [Lyngbya sp. PCC 8106] Length = 449 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 19/93 (20%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF-----PTPLGIK--------------PRLGD 41 + + +FG+PQ R R+Y+I LN S +F P P++ D Sbjct: 146 LNSVNFGLPQNRVRVYMIGVLNASPQFNLISDLGPKDSHSYNAVQLNLFSLQHFPPKVKD 205 Query: 42 ILEEHIDDKSTISNKLWEGHQKRKENNKIAGKG 74 ILEE+ D S + + K + + G Sbjct: 206 ILEENPDSSFDCSPEFSQALNKVVQGDLNKLHG 238 >gi|15088756|ref|NP_150145.1| putative DNA methylase [Streptococcus phage MM1] gi|15074902|emb|CAC48079.1| putative DNA methylase [Streptococcus phage MM1] gi|73747029|gb|AAZ82425.1| C5 methyltransferase alpha subunit [Streptococcus phage MM1 1998] Length = 385 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFP 30 + + +FGVPQ RER++II S FP Sbjct: 147 LNSKNFGVPQNRERVFIIGHLRGGSGRKVFP 177 >gi|331090242|ref|ZP_08339130.1| hypothetical protein HMPREF1025_02713 [Lachnospiraceae bacterium 3_1_46FAA] gi|330402188|gb|EGG81760.1| hypothetical protein HMPREF1025_02713 [Lachnospiraceae bacterium 3_1_46FAA] Length = 464 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 29/103 (28%), Gaps = 12/103 (11%) Query: 1 MKACDFGVPQRRERLYIID-FLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DFGVPQ RER++II + P L ++ + ++ + Sbjct: 151 LNSKDFGVPQNRERVFIIANLRSRGGREILPLCGENAATLNQLVGGMQGYRVYGTDGISA 210 Query: 60 GHQKRKENNKIAGKGFGYGLFFE-----------NSATTNTLS 91 + G T++ Sbjct: 211 TLVGNAGGVGAKTGLYLMGNLNPSGHGQGGNVYHEDGIAPTVT 253 >gi|256821199|ref|YP_003142398.1| DNA-cytosine methyltransferase [Anaerococcus prevotii DSM 20548] gi|256799179|gb|ACV29833.1| DNA-cytosine methyltransferase [Anaerococcus prevotii DSM 20548] Length = 321 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++++ + F F + R + LE++I + T++ Sbjct: 151 LNAMDFGIPQKRERIFVVSQFGEN-NFSFNKLERKETRPLSEFLEKNISELYTMTQPYM- 208 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 K NK F L + T+S Sbjct: 209 ----LKFLNKGIDNSFKGRLKVIKD-FSYTIS 235 >gi|258406639|ref|YP_003199380.1| transcriptional regulator, XRE family [Desulfohalobium retbaense DSM 5692] gi|257798866|gb|ACV69802.1| transcriptional regulator, XRE family [Desulfohalobium retbaense DSM 5692] Length = 468 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPL 33 + A D+GVPQ RER+ + N S++ P P Sbjct: 268 INAKDYGVPQHRERIIFVAVRNDLSIKSSIPDPK 301 >gi|298346143|ref|YP_003718830.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii ATCC 43063] gi|298236204|gb|ADI67336.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii ATCC 43063] Length = 355 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 12/83 (14%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 A ++GV + R+R++ I F +++F FP E K T+ + +W+ Sbjct: 149 NAKNYGVAEERKRVFYIGFRKDLNIDFVFPKGS----------TEDDAKKITLRDVIWD- 197 Query: 61 HQKRKENNKIAGKGFGYGLFFEN 83 Q+ + + Sbjct: 198 LQETAVPAAEKNRHNPQAINNNE 220 >gi|325130663|gb|EGC53404.1| DNA-cytosine methyltransferase [Neisseria meningitidis OX99.30304] gi|325134723|gb|EGC57362.1| DNA-cytosine methyltransferase [Neisseria meningitidis M13399] gi|325144843|gb|EGC67131.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240013] gi|325205668|gb|ADZ01121.1| DNA-cytosine methyltransferase [Neisseria meningitidis M04-240196] Length = 316 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 3/77 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT--PLGIKPRLGDILEEHIDD-KSTISNKL 57 + A D+GVPQ RER+ I+ L E + + + +D + I+N + Sbjct: 166 LNAADYGVPQTRERVIIVGRLPEIPEIQIEKTNTSNSYVTARQAIGDLVDKVEDEIANHI 225 Query: 58 WEGHQKRKENNKIAGKG 74 W +K + Sbjct: 226 WSRAEKSPDQGSRKLDA 242 >gi|225869346|ref|YP_002745294.1| C-5 cytosine-specific DNA methylase [Streptococcus equi subsp. zooepidemicus] gi|225702622|emb|CAX00673.1| C-5 cytosine-specific DNA methylase [Streptococcus equi subsp. zooepidemicus] Length = 451 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFP 30 + + DF VPQ RER++II F FP Sbjct: 148 LNSKDFQVPQNRERIFIIGHSRRYRPRFLFP 178 >gi|163761361|ref|ZP_02168435.1| C-5 cytosine-specific DNA methylase family protein [Hoeflea phototrophica DFL-43] gi|162281356|gb|EDQ31653.1| C-5 cytosine-specific DNA methylase family protein [Hoeflea phototrophica DFL-43] Length = 376 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 2/32 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFP 30 + A D+G PQRR+R++I+ + F++P Sbjct: 160 LDARDYGTPQRRQRVFILGIRRDVSTDGFEWP 191 >gi|188581100|ref|YP_001924545.1| DNA-cytosine methyltransferase [Methylobacterium populi BJ001] gi|179344598|gb|ACB80010.1| DNA-cytosine methyltransferase [Methylobacterium populi BJ001] Length = 446 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 3/48 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID 48 + A DFGVPQ RERL ++ +P P R D L D Sbjct: 156 LDAADFGVPQHRERLILLGARRGLPLPVYPLPT---TRPADRLPGLQD 200 >gi|319779704|ref|YP_004130617.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9] gi|317109728|gb|ADU92474.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9] Length = 339 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + + D+G+P R R+Y+I + EF+FP P+ + L D L + + + Sbjct: 152 LNSMDYGLPLNRLRVYMIAIRKDVNTREFEFPKPIPLTSYLEDYLLPDSETEHLVYKG 209 >gi|298253558|ref|ZP_06977348.1| site-specific DNA methylase [Gardnerella vaginalis 5-1] gi|297532325|gb|EFH71213.1| site-specific DNA methylase [Gardnerella vaginalis 5-1] Length = 317 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFGVPQ R+R II +N V P+ L K + D + + +S +++ E Sbjct: 110 LNAADFGVPQNRKRAVIIGKMNG-VAPSLPSSLNEKVTIWDAISDLAFLESGEGDEVQEY 168 Query: 61 HQKRKENNKIAGKGFGYGLFF 81 + + +G L+ Sbjct: 169 RYAPQSEYEKKLRGHANLLYN 189 >gi|329768652|ref|ZP_08260136.1| hypothetical protein HMPREF0428_01833 [Gemella haemolysans M341] gi|328836366|gb|EGF86031.1| hypothetical protein HMPREF0428_01833 [Gemella haemolysans M341] Length = 427 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FP 30 + + +FGVPQ RER++I+ L +K FP Sbjct: 148 LNSKNFGVPQNRERVFIVGHLRGGCTYKVFP 178 >gi|325096531|gb|EGC49841.1| C-5 cytosine methyltransferase DmtA [Ajellomyces capsulatus H88] Length = 651 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 8/106 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHI---DDKSTISNKL 57 + D+GVPQ R+RL I+ FP P P TI + + Sbjct: 468 LNCRDYGVPQSRQRLVILASGPGEPLPPFPKPTHTSPNTQINTTITTALLPPFRTIHDAI 527 Query: 58 WEGHQKRKENNKIAGKGFGYGLF-FENSATTNTLSA----RYYKDG 98 + +++ + ++ T++ Y+ G Sbjct: 528 SKIPPHHPDHDIQYARSRPLNRPTYDPHTQARTITCNGGENYHPSG 573 >gi|240280401|gb|EER43905.1| C-5 cytosine methyltransferase DmtA [Ajellomyces capsulatus H143] Length = 651 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 8/106 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHI---DDKSTISNKL 57 + D+GVPQ R+RL I+ FP P P TI + + Sbjct: 468 LNCRDYGVPQSRQRLVILASGPGEPLPPFPKPTHTSPNTQINTTITTALLPPFRTIHDAI 527 Query: 58 WEGHQKRKENNKIAGKGFGYGLF-FENSATTNTLSA----RYYKDG 98 + +++ + ++ T++ Y+ G Sbjct: 528 SKIPPHHPDHDIQYARSRPLNRPTYDPHTQARTITCNGGENYHPSG 573 >gi|40218563|gb|AAR83217.1| chromosome partitioning protein parB [Streptococcus pyogenes] gi|50261608|gb|AAT72376.1| methylase [Streptococcus pyogenes] Length = 388 Score = 51.2 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 30/97 (30%), Gaps = 4/97 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + D+GVPQ RER+Y I L + P L ++ + ++ + Sbjct: 152 NSKDYGVPQNRERVYTIGHLRSRGRRQVLPLQPESSGNLKQLVGGMQSYRVYDTDGISTT 211 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATT---NTLSARY 94 + T ++ARY Sbjct: 212 LVGTGGGVGAKTGLYLIDQSTTKPKVTDQARCITARY 248 >gi|159029905|emb|CAO90959.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 346 Score = 51.2 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 27/78 (34%), Gaps = 3/78 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + + F +PQ R R +++ F F+FP P + + I+ D IS K Sbjct: 159 IDSKYFQIPQSRPRFFLLAFRKDLGIKNFQFPQPCHAEVGIEKIIVPG-DYSIPISEKWQ 217 Query: 59 EGHQKRKENNKIAGKGFG 76 + F Sbjct: 218 QYIDYYAGRITAEQLSFQ 235 >gi|149919032|ref|ZP_01907517.1| DNA-cytosine methyltransferase family protein [Plesiocystis pacifica SIR-1] gi|149820185|gb|EDM79604.1| DNA-cytosine methyltransferase family protein [Plesiocystis pacifica SIR-1] Length = 401 Score = 51.2 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 9/68 (13%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-----IKPRLGDILEEHIDDKST---I 53 A D+GVPQ R+RL+++ + +F P+P D + + + Sbjct: 169 NAADYGVPQFRQRLFVLASIEGK-DFSMPSPTHGDGALEYITAWDAIGHLDNKRWPKELS 227 Query: 54 SNKLWEGH 61 W G Sbjct: 228 PTGRWAGL 235 >gi|110834520|ref|YP_693379.1| C-5 cytosine-specific DNA methylase family protein [Alcanivorax borkumensis SK2] gi|110647631|emb|CAL17107.1| C-5 cytosine-specific DNA methylase family protein [Alcanivorax borkumensis SK2] Length = 308 Score = 51.2 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 9/74 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLG-----IKPRLGDILEEHI--DDKST 52 + DFGVPQ R+RL + + E F FP K +GD + + + Sbjct: 137 IDVSDFGVPQERKRLIFVGVRSDLGEVFAFPEATHGTAIQNKITIGDAIGDLPLWPEGDY 196 Query: 53 ISNKL-WEGHQKRK 65 + W + + Sbjct: 197 WTETFHWYYLSRNR 210 >gi|227431785|ref|ZP_03913812.1| possible DNA (cytosine-5-)-methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352468|gb|EEJ42667.1| possible DNA (cytosine-5-)-methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 448 Score = 51.2 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 32/92 (34%), Gaps = 17/92 (18%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + DFGVPQ RER+YII L E + FP I+++ Sbjct: 150 NSKDFGVPQNRERVYIIGHLRGDSEREVFPFFGENGEINQSIIKQ--------------- 194 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 K+ G + + T+SA Sbjct: 195 -IGNVSTGKMLENNSQSGRVYSLDSLAPTISA 225 >gi|242022906|ref|XP_002431878.1| DNA cytosine-5,-methyltransferase, putative [Pediculus humanus corporis] gi|212517219|gb|EEB19140.1| DNA cytosine-5,-methyltransferase, putative [Pediculus humanus corporis] Length = 1330 Score = 51.2 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 28/60 (46%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++A ++G+PQ R RL+I+ FP P + L+ +DDK +N W Sbjct: 1032 LQAGNYGIPQTRRRLFILAAAPNLKLPLFPEPTHVFSLRASNLQVTVDDKRFTTNCKWST 1091 >gi|326802740|ref|YP_004320558.1| DNA (cytosine-5-)-methyltransferase [Aerococcus urinae ACS-120-V-Col10a] gi|326651598|gb|AEA01781.1| DNA (cytosine-5-)-methyltransferase [Aerococcus urinae ACS-120-V-Col10a] Length = 321 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++++ L + F F + R + LE+ + T++ Sbjct: 151 LNAMDFGIPQKRERIFVVSCLGAN-SFSFDKLERKETRPLSEFLEKDVSGLYTMTQPYM- 208 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 K NK F L + T+S Sbjct: 209 ----LKFLNKGIDNSFKGRLKVIKD-FSYTIS 235 >gi|225863800|ref|YP_002749178.1| cytosine-specific methyltransferase NlaX [Bacillus cereus 03BB102] gi|225788166|gb|ACO28383.1| cytosine-specific methyltransferase NlaX [Bacillus cereus 03BB102] Length = 576 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 17/24 (70%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS 24 + + DFGVPQ RER++II L + Sbjct: 148 LNSKDFGVPQNRERVFIIGHLRGT 171 >gi|326789360|ref|YP_004307181.1| DNA-cytosine methyltransferase [Clostridium lentocellum DSM 5427] gi|326540124|gb|ADZ81983.1| DNA-cytosine methyltransferase [Clostridium lentocellum DSM 5427] Length = 446 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLN-PSVEFKFPTPL 33 + A D+GVPQ RER+++I +V ++ P Sbjct: 165 LNAADYGVPQIRERVFVIAIKKNENVRYELPKAT 198 >gi|227540659|ref|ZP_03970708.1| possible DNA (cytosine-5-)-methyltransferase [Sphingobacterium spiritivorum ATCC 33300] gi|227239483|gb|EEI89498.1| possible DNA (cytosine-5-)-methyltransferase [Sphingobacterium spiritivorum ATCC 33300] Length = 386 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 12/42 (28%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE------------FKFP 30 + + DFGVPQ RER++ + ++ F FP Sbjct: 171 LNSLDFGVPQHRERIFFVGIRKEFLDGKIVEQGSFGKWFPFP 212 >gi|238801891|ref|YP_002925094.1| putative DNA methylase [Streptococcus phage 5093] gi|238558577|gb|ACR45907.1| putative DNA methylase [Streptococcus phage 5093] Length = 319 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFP 30 + + DFGVPQ RERL+II FP Sbjct: 147 LNSKDFGVPQNRERLFIIGHLRGERGRKVFP 177 >gi|258652183|ref|YP_003201339.1| DNA-cytosine methyltransferase [Nakamurella multipartita DSM 44233] gi|258555408|gb|ACV78350.1| DNA-cytosine methyltransferase [Nakamurella multipartita DSM 44233] Length = 467 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 6/71 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEE------HIDDKSTIS 54 + +FG+PQ R+R Y + + +F++P + +L+ I ++T + Sbjct: 154 LSPHEFGIPQIRDRAYFVGSRDGLEQFRWPETEKSSTDIKSVLKHDLVDVRPIPAQTTHA 213 Query: 55 NKLWEGHQKRK 65 +W+ KR Sbjct: 214 INMWDDFLKRS 224 >gi|284054848|ref|ZP_06385058.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca] Length = 220 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 36/99 (36%), Gaps = 14/99 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT------PLGIKPRLGDILEEHIDDKSTIS 54 + A ++GVPQ+RERL+++ + + +P P + D ++ Sbjct: 77 INAVNYGVPQKRERLFVVAY---QTAWNWPEAETLAIPYTAGDAIYDTASTIPIGAKFLT 133 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + E + + +K Y TL+ R Sbjct: 134 PSMLEYIGRYEAKSKCVKPRDIY-----LDIPCRTLTCR 167 >gi|332665156|ref|YP_004447944.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM 1100] gi|332333970|gb|AEE51071.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM 1100] Length = 416 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 + A ++GVPQRRER +I E FP P Sbjct: 193 LNAANYGVPQRRERFILIGM-KGIKEPAFPLPTH 225 >gi|168490143|ref|ZP_02714342.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae SP195] gi|183571468|gb|EDT91996.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae SP195] gi|321157174|emb|CBW39159.1| Cytosine-specific DNA methyltransferase [Streptococcus phage 11865] Length = 360 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 37/124 (29%), Gaps = 25/124 (20%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILE---------EHIDDK 50 + + +FGVPQ RER++II FP + + ++ + Sbjct: 147 LNSKNFGVPQNRERVFIIGHLRRERTRRFFPLSGKNQSTSNQSVMKIGNINPSGNGMNGE 206 Query: 51 STISNKLWEGHQKRKENNKIAG--------------KGFGYGLFFENSATTNTLSARYYK 96 ++ L K + G+ +E T+ A Y Sbjct: 207 VYQADGLAPTLTTNKGEGQKIAIKSNTIKQFGVLQPNFNQCGVVYETDGIAPTIRA-YQG 265 Query: 97 DGSE 100 G E Sbjct: 266 GGLE 269 >gi|315657354|ref|ZP_07910236.1| modification methylase NgoPII [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491826|gb|EFU81435.1| modification methylase NgoPII [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 355 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLG----IKPRLGDILEEHIDDKSTISNK 56 A ++GV + R+R++ I F +++F FP K L D++ + + + K Sbjct: 149 NAKNYGVAEERKRVFYIGFRKDLNIDFVFPKGSTEDDAKKITLRDVIWDLQETAVPAAEK 208 >gi|304390097|ref|ZP_07372051.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326579|gb|EFL93823.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 355 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLG----IKPRLGDILEEHIDDKSTISNK 56 A ++GV + R+R++ I F +++F FP K L D++ + + + K Sbjct: 149 NAKNYGVAEERKRVFYIGFRKDLNIDFVFPKGSTEDDAKKITLRDVIWDLQETAVPAAEK 208 >gi|298492225|ref|YP_003722402.1| DNA-cytosine methyltransferase ['Nostoc azollae' 0708] gi|298234143|gb|ADI65279.1| DNA-cytosine methyltransferase ['Nostoc azollae' 0708] Length = 434 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 20/45 (44%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEE 45 + A ++GVPQ RERL+++ P + + + + Sbjct: 157 LNAANYGVPQNRERLFLLGCRQDLKLPNHPDKITHPAKSNNSIAC 201 >gi|160894995|ref|ZP_02075769.1| hypothetical protein CLOL250_02545 [Clostridium sp. L2-50] gi|156863426|gb|EDO56857.1| hypothetical protein CLOL250_02545 [Clostridium sp. L2-50] Length = 447 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS---VEFKFPT 31 + + DFGVPQ R+R+YI+ +L+ FP Sbjct: 164 LNSKDFGVPQSRKRVYIVGYLDGRCAGKILPFPK 197 >gi|153852755|ref|ZP_01994192.1| hypothetical protein DORLON_00174 [Dorea longicatena DSM 13814] gi|149754397|gb|EDM64328.1| hypothetical protein DORLON_00174 [Dorea longicatena DSM 13814] Length = 367 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS---VEFKFPT 31 + + DFGVPQ R+R+YI+ +L+ FP Sbjct: 84 LNSKDFGVPQSRKRVYIVGYLDGRCAGKILPFPK 117 >gi|306835815|ref|ZP_07468812.1| modification methylase NaeI [Corynebacterium accolens ATCC 49726] gi|304568289|gb|EFM43857.1| modification methylase NaeI [Corynebacterium accolens ATCC 49726] Length = 345 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 7/61 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 ++A ++GVPQ R R ++ E F +P + + +G+ L K ++ W+ Sbjct: 154 LQAANYGVPQLRPRFILVALKKEFSEFFAWPNKVPHQVTVGEAL------KDLMAENGWK 207 Query: 60 G 60 G Sbjct: 208 G 208 >gi|212695555|ref|ZP_03303683.1| hypothetical protein ANHYDRO_00072 [Anaerococcus hydrogenalis DSM 7454] gi|212677433|gb|EEB37040.1| hypothetical protein ANHYDRO_00072 [Anaerococcus hydrogenalis DSM 7454] Length = 321 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+R+R++++ L + F F + +ILE+++ + T++ Sbjct: 151 LNAMDFGIPQKRDRIFVVSCLGAN-NFSFNKLERKETSPLSEILEKNVSELYTMTQPYM- 208 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 K NK F L + T+S Sbjct: 209 ----LKFLNKGIDNSFRGRLKVIKD-FSYTIS 235 >gi|153815491|ref|ZP_01968159.1| hypothetical protein RUMTOR_01726 [Ruminococcus torques ATCC 27756] gi|145847133|gb|EDK24051.1| hypothetical protein RUMTOR_01726 [Ruminococcus torques ATCC 27756] Length = 439 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 29/85 (34%), Gaps = 1/85 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DFGVPQ R+R+Y++ +L+ P P L I + L Sbjct: 160 LNSKDFGVPQSRKRVYLVGYLDRRCAGKILPFPAANGTSLIQIRTGSQGKRVYSPEGLSC 219 Query: 60 GHQKRKENNKIAGKGFGYGLFFENS 84 + G+ + + Sbjct: 220 TLTSLAGGMGGKTGLYEMGIPIKEN 244 >gi|237753192|ref|ZP_04583672.1| cytosine specific DNA methyltransferase [Helicobacter winghamensis ATCC BAA-430] gi|229375459|gb|EEO25550.1| cytosine specific DNA methyltransferase [Helicobacter winghamensis ATCC BAA-430] Length = 354 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 + A DF VPQ RER + I + F P P ++ + D + Sbjct: 156 LNAKDFCVPQNRERAFFIAHKKEYLGF--PAPSEMQVCVKDAI 196 >gi|307244197|ref|ZP_07526312.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus stomatis DSM 17678] gi|306492347|gb|EFM64385.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus stomatis DSM 17678] Length = 534 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 28/82 (34%), Gaps = 6/82 (7%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIK----PRLGDILEEHIDD-KSTISN 55 A +GVPQ R R+ ++ F + F FP + DI EE + S Sbjct: 340 NASSYGVPQNRIRVIVVAFRKDLNKMFIFPEEQSKEGLNIGMCLDIPEEVPNQVDWPFSP 399 Query: 56 KLWEGHQKRKENNKIAGKGFGY 77 + Q E + Y Sbjct: 400 QAMNLIQHIPEGGSWKSIPYEY 421 >gi|268680630|ref|YP_003305061.1| DNA-cytosine methyltransferase [Sulfurospirillum deleyianum DSM 6946] gi|268618661|gb|ACZ13026.1| DNA-cytosine methyltransferase [Sulfurospirillum deleyianum DSM 6946] Length = 398 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 35/107 (32%), Gaps = 13/107 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-----------SVEFK-FPTPLGIKPRLGDILEEHID 48 + A ++GVPQ RER+ I + EF +P P +++ + Sbjct: 199 LHAGNYGVPQTRERIIFIGVRKDILSEDLHVKLQNGEFSLYPEPTHDIKHDFVTVKDALF 258 Query: 49 DKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYY 95 D HQK + G N T+ A ++ Sbjct: 259 DLCEPEQSEDLSHQKYSKAKWFGKHCQGQTEINPN-KLAPTIRAEHH 304 >gi|167046802|ref|YP_001661472.1| DNA methyltransferase [Acinetobacter venetianus] gi|83833711|gb|ABC47668.1| DNA methyltransferase [Acinetobacter venetianus] Length = 737 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 9/94 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP-------LGIKPRLGDILEEHID-DKST 52 + + +GVPQ+RER++++ +F FP P L +GD + + + + Sbjct: 155 IDSSLYGVPQKRERVFLMGTRLQHKKFNFPKPDVKPYGFLKSFKNVGDAINDLANFENEE 214 Query: 53 ISNKLWEGHQKRKENNKIAGKGFGYGLFFENSAT 86 N + H + + G L Sbjct: 215 FPNHIILNHSDIVKR-RYELIPEGGKLPKPEDLP 247 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 23/94 (24%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG---------------------IKPRL 39 + A D+GVPQ R+R +I V FP P + P Sbjct: 528 INAADYGVPQLRKRFLLIGTKTDLV-IPFPKPKYFSTPDSWQLPYRTVGEVITDLMDPSS 586 Query: 40 GDILEEHIDDKSTISN-KLWEGHQKRKENNKIAG 72 D+L H+ K + + + ++ K+ + Sbjct: 587 YDLLSHHVPAKHAPTIVERYSYIEEGKKLDIERL 620 >gi|127416|sp|P10283|MTB1_BREEP RecName: Full=Modification methylase BepI; Short=M.BepI; AltName: Full=Cytosine-specific methyltransferase BepI gi|580766|emb|CAA31907.1| unnamed protein product [Brevibacterium epidermidis] Length = 403 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 36/118 (30%), Gaps = 28/118 (23%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK--------------FPTPL---------GIKP 37 + A ++GV Q RER+ I K +P P Sbjct: 202 LNAKNYGVAQNRERVIFIGISKRYANKKILDELISLQEKSEVYPYPPYTHGTDPELKPYA 261 Query: 38 RLGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYY 95 L IL + + ++K + + K K K + + T+ A ++ Sbjct: 262 TLNQILAHLPEPELASTDKSQQSYSKAKL-----FKKTQGNIEVNMNGQAPTIRAEHH 314 >gi|298504551|gb|ADI83274.1| DNA cytosine methyltransferase [Geobacter sulfurreducens KN400] Length = 428 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 36/102 (35%), Gaps = 9/102 (8%) Query: 1 MKACDFGVPQRRERLYIID--FLNPSVEFKFPTPLGIKPRLGDILEEHID-DKSTISNKL 57 + A D+GVPQ R R +II F NP+ F P KP G + D T + + Sbjct: 178 LCAADYGVPQIRWRAFIIGCSFTNPAAVFP-PKKTNFKPNNGYRKAFSEEFDSYTENPHI 236 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENS-----ATTNTLSARY 94 W+ + + T T ARY Sbjct: 237 WKTVRDAISDLPEPVGTEVRDAIPPLDLHFGRTPTPTSIARY 278 >gi|46019864|emb|CAE52388.1| putative cytosine-specific methyltransferase [Streptococcus thermophilus] gi|312279225|gb|ADQ63882.1| Cytosine-specific methyltransferase [Streptococcus thermophilus ND03] Length = 515 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 4/65 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK-PRLGDILEEHIDDKSTISNKLWE 59 + + +FGVPQ+R R+ + + N ++P P + + D L + + + E Sbjct: 182 LNSANFGVPQQRNRVVFLAYRNDVNPLEYPEPNVLPEVTVRDALTGLYN---INQDDISE 238 Query: 60 GHQKR 64 Q R Sbjct: 239 YAQNR 243 >gi|300933957|ref|ZP_07149213.1| DNA-cytosine methyltransferase [Corynebacterium resistens DSM 45100] Length = 363 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 9/92 (9%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLG------IKPRLGDILEEHIDDKSTIS 54 ++GVPQ RER+ I+ + FK P P G+ LE +K + Sbjct: 152 NFAEYGVPQFRERVLIVGIRRDTGFNFKHPAPTHGPRGELPYMTAGEALEGV--EKVPFN 209 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENSAT 86 N + +E K +G + ++S Sbjct: 210 NNHMRQMPRTREILKRIPEGGNFTDIPKDSPY 241 >gi|331085773|ref|ZP_08334856.1| hypothetical protein HMPREF0987_01159 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406696|gb|EGG86201.1| hypothetical protein HMPREF0987_01159 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 356 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 16/31 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT 31 + A D+GVPQ R+RL + KFP Sbjct: 149 LCAADYGVPQIRKRLIFMGIRKDIGAPKFPE 179 >gi|268686152|ref|ZP_06153014.1| modification methylase NgoFVII [Neisseria gonorrhoeae SK-93-1035] gi|268626436|gb|EEZ58836.1| modification methylase NgoFVII [Neisseria gonorrhoeae SK-93-1035] Length = 374 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKP 37 +FGVPQ RER+ I+ + +F+ P P + Sbjct: 160 NFAEFGVPQFRERVLIVGVRLDTGFDFRHPEPTHNET 196 >gi|187778292|ref|ZP_02994765.1| hypothetical protein CLOSPO_01884 [Clostridium sporogenes ATCC 15579] gi|187771917|gb|EDU35719.1| hypothetical protein CLOSPO_01884 [Clostridium sporogenes ATCC 15579] Length = 355 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 13/104 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPT-PLGIKPRLGDILEEHIDDKSTISNKLW 58 + + DFGVPQ RER++ I L K FP + L ++ ++ + + Sbjct: 146 LNSKDFGVPQNRERVFTIGHLRRYGRRKIFPIGGSNGEATLKQLIGGSQGNRVYDPSGIS 205 Query: 59 EGHQKRKENNKIAGKGFGYGLFFEN-----------SATTNTLS 91 + + G N + T++ Sbjct: 206 CTLAGQAGGQGAKTGLYLVGNVHPNGKGMNGNVYDSKGISPTIT 249 >gi|288906872|emb|CBJ21706.1| type II DNA modification methyltransferase [Streptococcus mitis B6] Length = 380 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FP 30 + + +FGVPQ RER++II L + K FP Sbjct: 147 LNSKNFGVPQNRERVFIIGHLRGTSGRKVFP 177 >gi|59800809|ref|YP_207521.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae FA 1090] gi|254493277|ref|ZP_05106448.1| modification methylase NgoFVII [Neisseria gonorrhoeae 1291] gi|260440968|ref|ZP_05794784.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae DGI2] gi|268594414|ref|ZP_06128581.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae 35/02] gi|268596411|ref|ZP_06130578.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae FA19] gi|268598542|ref|ZP_06132709.1| modification methylase NgoFVII [Neisseria gonorrhoeae MS11] gi|268600894|ref|ZP_06135061.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID18] gi|268681681|ref|ZP_06148543.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID332] gi|268683908|ref|ZP_06150770.1| modification methylase NgoFVII [Neisseria gonorrhoeae SK-92-679] gi|291044296|ref|ZP_06570005.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae DGI2] gi|293399487|ref|ZP_06643640.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|59717704|gb|AAW89109.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae FA 1090] gi|226512317|gb|EEH61662.1| modification methylase NgoFVII [Neisseria gonorrhoeae 1291] gi|268547803|gb|EEZ43221.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae 35/02] gi|268550199|gb|EEZ45218.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae FA19] gi|268582673|gb|EEZ47349.1| modification methylase NgoFVII [Neisseria gonorrhoeae MS11] gi|268585025|gb|EEZ49701.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID18] gi|268621965|gb|EEZ54365.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID332] gi|268624192|gb|EEZ56592.1| modification methylase NgoFVII [Neisseria gonorrhoeae SK-92-679] gi|291011190|gb|EFE03186.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae DGI2] gi|291610056|gb|EFF39178.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] Length = 374 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKP 37 +FGVPQ RER+ I+ + +F+ P P + Sbjct: 160 NFAEFGVPQFRERVLIVGVRLDTGFDFRHPEPTHNET 196 >gi|112983430|ref|NP_001036980.1| DNA cytosine-5 methyltransferase [Bombyx mori] gi|54888739|dbj|BAD67189.1| DNA cytosine-5 methyltransferase [Bombyx mori] Length = 1409 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 31/86 (36%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++A ++GVPQ R RL I+ +P P + R L ID K +N W+ Sbjct: 1106 LQAGNYGVPQTRRRLIILAAAPGYNLPFYPEPTHVFSRRACTLTTTIDGKRFSTNIHWDE 1165 Query: 61 HQKRKENNKIAGKGFGYGLFFENSAT 86 ++ + + Sbjct: 1166 SAPKRTCTIQDAMSDLPQICNGANKI 1191 >gi|311897184|dbj|BAJ29592.1| putative modification methylase [Kitasatospora setae KM-6054] Length = 433 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 8/92 (8%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 A D+GVPQ R R+ I+ F V+ + L L +S ++ WE Sbjct: 202 NAADYGVPQIRNRVIIVAFRRDLKVDIELFKELVKPTHSETALI-----RSMMAGGYWEH 256 Query: 61 HQKRKENNKIAGKGFGYGLFFENSA--TTNTL 90 H + + + + ++ TL Sbjct: 257 HADVPPHVREWVEKRLPKVSPKDDGLLPWRTL 288 >gi|310819714|ref|YP_003952072.1| cytosine-specific methyltransferase [Stigmatella aurantiaca DW4/3-1] gi|309392786|gb|ADO70245.1| Cytosine-specific methyltransferase [Stigmatella aurantiaca DW4/3-1] Length = 421 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 A +GVPQ R+RL I+ + V F P+P Sbjct: 166 NAASYGVPQLRKRLIIVGARDGKV-FNVPSPTH 197 >gi|11386930|sp|Q59606|MTF7_NEIGO RecName: Full=Modification methylase NgoFVII; Short=M.NgoFVII; AltName: Full=Cytosine-specific methyltransferase NgoFVII; Short=M.NgoVII gi|1165245|gb|AAA86270.1| M.NgoVII [Neisseria gonorrhoeae] Length = 374 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKP 37 +FGVPQ RER+ I+ + +F+ P P + Sbjct: 160 NFAEFGVPQFRERVLIVGVRLDTGFDFRHPEPTHNET 196 >gi|302380785|ref|ZP_07269249.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna ACS-171-V-Col3] gi|302311385|gb|EFK93402.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna ACS-171-V-Col3] Length = 321 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + A DFG+PQ+RER++++ L + F F + R + LE+ + T++ Sbjct: 151 LNAMDFGIPQKRERIFVVSCLGAN-SFSFDKLERKETRPLSEFLEKDVSGLYTMTQPYM- 208 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 K NK F L + T+S Sbjct: 209 ----LKFLNKGIDNSFRGRLKVIKD-FSYTIS 235 >gi|284928852|ref|YP_003421374.1| DNA-methyltransferase Dcm [cyanobacterium UCYN-A] gi|284809311|gb|ADB95016.1| DNA-methyltransferase Dcm [cyanobacterium UCYN-A] Length = 422 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 13/102 (12%), Positives = 33/102 (32%), Gaps = 18/102 (17%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP-----------LGIKPRLGDILEEHIDD 49 + A ++GVPQ R+RL+I+ + +P + P + + + + Sbjct: 157 LNAANYGVPQIRKRLFIMGGKSDLPLPDYPQFLTNYNQEINSTIPFTPTVSQAINDLPEV 216 Query: 50 KSTISNKLWEGHQ-------KRKENNKIAGKGFGYGLFFENS 84 + + + + F Y ++ + Sbjct: 217 NHYPELSYKDSMKVNSSKLNDYVKGLLDSNDNFSYKRIYDKN 258 >gi|17232307|ref|NP_488855.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120] gi|17133952|dbj|BAB76514.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120] Length = 414 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 26/75 (34%), Gaps = 4/75 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR---LGDILEEHIDDKSTISNKL 57 + A ++G+PQ RER++I+ V P L D + L Sbjct: 159 LNAAEYGIPQIRERIFIVGNKKGKV-LGIPKKTHSLQFLNLNRSQLSIFDDMSIIPALTL 217 Query: 58 WEGHQKRKENNKIAG 72 W+ E N G Sbjct: 218 WDAISDLPELNAREG 232 >gi|315636653|ref|ZP_07891886.1| modification methylase Eco47II [Arcobacter butzleri JV22] gi|315479079|gb|EFU69779.1| modification methylase Eco47II [Arcobacter butzleri JV22] Length = 411 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLN---PSVEFKFPTPLGIKPRLGDILEEHID-DKSTISNK 56 +KA + VPQ+RERL I+ V + +P P L D L++ DK + Sbjct: 217 LKAIYYKVPQKRERLIIVGIKKEFMEKVTYSYPEPNEKIYTLKDALKKGELFDKDVPKSS 276 Query: 57 LWEGHQKRKE 66 + +++KE Sbjct: 277 GQKYPKRKKE 286 >gi|331219056|ref|XP_003322205.1| hypothetical protein PGTG_03742 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309301195|gb|EFP77786.1| hypothetical protein PGTG_03742 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1194 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 1/59 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG-DILEEHIDDKSTISNKLW 58 ++A FG PQ R R+ + K P P P G IL D+KS + Sbjct: 694 LQAAQFGSPQARRRIIFAGTRHGLTAIKLPEPTHHYPDEGLAILLPTNDEKSDHNGHRL 752 >gi|302873674|ref|YP_003842307.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|307686602|ref|ZP_07629048.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|302576531|gb|ADL50543.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] Length = 448 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 1/84 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DFGVPQ RER++II L + P + L I+ ++ S + Sbjct: 151 LNSKDFGVPQNRERVFIIASLRSRGRREILPIGGENRATLKQIIGVCQGERVYDSEGVAC 210 Query: 60 GHQKRKENNKIAGKGFGYGLFFEN 83 + G + Sbjct: 211 TLTGCGGGGGAKTGLYCVGNINPS 234 >gi|91215328|ref|ZP_01252299.1| modification methylase (Eco47II, Sau96I) [Psychroflexus torquis ATCC 700755] gi|91186280|gb|EAS72652.1| modification methylase (Eco47II, Sau96I) [Psychroflexus torquis ATCC 700755] Length = 412 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 4/69 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEH--IDDKSTISNKL 57 +KA ++ VPQ+RERL ++ +E+ +P+P L D L++ D K IS Sbjct: 221 LKAINYNVPQKRERLILVGVRKDIDLEYVYPSPYEKVYNLSDALKKGELYDSKVPISKGT 280 Query: 58 WEGHQKRKE 66 + + +K+ Sbjct: 281 -QYPENKKK 288 >gi|325133150|gb|EGC55821.1| modification methylase HphIA [Neisseria meningitidis M6190] gi|325138766|gb|EGC61318.1| modification methylase HphIA [Neisseria meningitidis ES14902] gi|325197365|gb|ADY92821.1| modification methylase HphIA [Neisseria meningitidis G2136] gi|325203202|gb|ADY98655.1| modification methylase HphIA [Neisseria meningitidis M01-240355] Length = 332 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHID 48 + A DFGVPQ R R+ I + FP PL +G + Sbjct: 155 LSAADFGVPQIRSRVIFIG-RRDKGKISFPEPLQISHQTVGSAIGHFPK 202 >gi|268602423|ref|ZP_06136590.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae PID18] gi|268586554|gb|EEZ51230.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae PID18] Length = 315 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHID 48 + A DFGVPQ R R+ I + FP PL +G + Sbjct: 137 LSAADFGVPQIRSRVIFIG-RRDKGKISFPEPLQISHQTVGSAIGHFPK 184 >gi|240114016|ref|ZP_04728506.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae MS11] Length = 333 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHID 48 + A DFGVPQ R R+ I + FP PL +G + Sbjct: 155 LSAADFGVPQIRSRVIFIG-RRDKGKISFPEPLQISHQTVGSAIGHFPK 202 >gi|1098476|gb|AAC37047.1| orf; homologous to Haemophilus parahaemolyticus hphIM(C) Accession Number M24625 [Neisseria meningitidis] Length = 276 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHID 48 + A DFGVPQ R R+ I + FP PL +G + Sbjct: 155 LSAADFGVPQIRSRVIFIG-RRDKGKISFPEPLQISHQTVGSAIGHFPK 202 >gi|59802210|ref|YP_208922.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA 1090] gi|239997871|ref|ZP_04717795.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae 35/02] gi|240015148|ref|ZP_04722061.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae DGI18] gi|240017596|ref|ZP_04724136.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA6140] gi|240081740|ref|ZP_04726283.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA19] gi|240116752|ref|ZP_04730814.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae PID18] gi|240118973|ref|ZP_04733035.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae PID1] gi|240122219|ref|ZP_04735181.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae PID24-1] gi|240124509|ref|ZP_04737465.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae PID332] gi|240124618|ref|ZP_04737504.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae SK-92-679] gi|240129189|ref|ZP_04741850.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae SK-93-1035] gi|260439487|ref|ZP_05793303.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae DGI2] gi|268593717|ref|ZP_06127884.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae 35/02] gi|268597838|ref|ZP_06132005.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA19] gi|268683185|ref|ZP_06150047.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae SK-92-679] gi|291042721|ref|ZP_06568462.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae DGI2] gi|293398253|ref|ZP_06642458.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|2330911|gb|AAC45838.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae] gi|59719105|gb|AAW90510.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA 1090] gi|268547106|gb|EEZ42524.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae 35/02] gi|268551626|gb|EEZ46645.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA19] gi|268623469|gb|EEZ55869.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae SK-92-679] gi|291013155|gb|EFE05121.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae DGI2] gi|291611516|gb|EFF40586.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|317165321|gb|ADV08862.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae TCDC-NG08107] Length = 333 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHID 48 + A DFGVPQ R R+ I + FP PL +G + Sbjct: 155 LSAADFGVPQIRSRVIFIG-RRDKGKISFPEPLQISHQTVGSAIGHFPK 202 >gi|209546991|ref|YP_002278909.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538235|gb|ACI58169.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 355 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 34/99 (34%), Gaps = 7/99 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFG PQRR R +I LN E P P L + + + + + E Sbjct: 147 LNAADFGCPQRRSRYIVIAALNSDPELPKAVPNVEVPTLWQAIGDLPELLNGATVDELEY 206 Query: 61 ----HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYY 95 + + L N+ + + ARY Sbjct: 207 GGAPLSEYARRMRSDLAKCTGHLVSRNADS---IVARYA 242 >gi|217032692|ref|ZP_03438178.1| hypothetical protein HPB128_202g26 [Helicobacter pylori B128] gi|216945622|gb|EEC24273.1| hypothetical protein HPB128_202g26 [Helicobacter pylori B128] Length = 211 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHID 48 + + DF + Q+RERLYI+ F F FP L D L+ + Sbjct: 139 LNSTDFQLAQKRERLYIVGFRKDLKHPFHFPLGLANDYYFEDFLDADNE 187 >gi|240127759|ref|ZP_04740420.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae SK-93-1035] Length = 347 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKP 37 +FGVPQ RER+ I+ + +F+ P P + Sbjct: 133 NFAEFGVPQFRERVLIVGVRLDTGFDFRHPEPTHNET 169 >gi|308229518|gb|ADO24171.1| M.AciI [Arthrobacter citreus] Length = 703 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 32/92 (34%), Gaps = 9/92 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--------SVEFKFPTPLGIKPRLGDILEEHIDDKST 52 M A D+GVPQ R R Y + N + EF FP + + +E Sbjct: 525 MNAKDYGVPQNRNRWYCVGINNDLGVVSTSMNSEF-FPEKEELTTFIDSFIETTFLPTYE 583 Query: 53 ISNKLWEGHQKRKENNKIAGKGFGYGLFFENS 84 +S + E K + + L N+ Sbjct: 584 VSEIAQKNMNAFIEEFKNSPRYNPNHLIIANN 615 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 39/138 (28%), Gaps = 45/138 (32%) Query: 1 MKACDFGVPQRRERLYIIDFLN-PSVEFKFPTPLGIKPRLG------------------- 40 + + + G+PQ R+R YI+ + P+ +F+ L Sbjct: 165 INSNEAGLPQNRDRTYIVGIKDFPTEKFEEDKRSKKISCLKKELNELEFHGFNFFNNVNF 224 Query: 41 --------DILEEHIDDKSTI-SNKLWEGHQKRKENNKIA----------------GKGF 75 DIL++ +D K S K+ + Sbjct: 225 YNESQIISDILDDIVDKKYYFNSEKMKRFLSTINIDEVNEPVSKIVKVLDLPRETHNDNE 284 Query: 76 GYGLFFENSATTNTLSAR 93 + + + T+ AR Sbjct: 285 RQRRVYSVNGISPTILAR 302 >gi|317056067|ref|YP_004104534.1| DNA-cytosine methyltransferase [Ruminococcus albus 7] gi|315448336|gb|ADU21900.1| DNA-cytosine methyltransferase [Ruminococcus albus 7] Length = 425 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 12/23 (52%), Positives = 17/23 (73%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + + DFGVPQ R+R++II FL Sbjct: 146 LNSADFGVPQARKRVFIIGFLRG 168 >gi|194098099|ref|YP_002001147.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae NCCP11945] gi|239998556|ref|ZP_04718480.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae 35/02] gi|240013681|ref|ZP_04720594.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae DGI18] gi|240016120|ref|ZP_04722660.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae FA6140] gi|240080261|ref|ZP_04724804.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae FA19] gi|240112474|ref|ZP_04726964.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae MS11] gi|240115214|ref|ZP_04729276.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae PID18] gi|240120750|ref|ZP_04733712.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae PID24-1] gi|240123054|ref|ZP_04736010.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae PID332] gi|240125307|ref|ZP_04738193.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae SK-92-679] gi|193933389|gb|ACF29213.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae NCCP11945] gi|317163831|gb|ADV07372.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae TCDC-NG08107] Length = 347 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKP 37 +FGVPQ RER+ I+ + +F+ P P + Sbjct: 133 NFAEFGVPQFRERVLIVGVRLDTGFDFRHPEPTHNET 169 >gi|307354298|ref|YP_003895349.1| DNA-cytosine methyltransferase [Methanoplanus petrolearius DSM 11571] gi|307157531|gb|ADN36911.1| DNA-cytosine methyltransferase [Methanoplanus petrolearius DSM 11571] Length = 421 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP--LGIKPRLGDILEEHID 48 + A DFGV Q R+R+ I + +F++P + D+L + + Sbjct: 202 LNARDFGVLQNRKRIIFIGWKKEH-DFEYPNFGNHESGYVVWDVLRDLPE 250 >gi|207109252|ref|ZP_03243414.1| putative site-specific DNA-methyltransferase [Helicobacter pylori HPKX_438_CA4C1] Length = 210 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A DF VPQ RER+ I+ +L V F F P+ Sbjct: 171 LNAKDFSVPQNRERIIIVGYLGSQV-FDF-NPIKK 203 >gi|315585937|gb|ADU40318.1| site-specific DNA-methyltransferase [Helicobacter pylori 35A] Length = 295 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + + +G RRERL I+ N F FP P + D + +D K ++ Sbjct: 91 LNSAWYGSATRRERLIIVAIRNDLPFNFTFPKPTHL----SDEINTKLDFKDLPTS 142 >gi|283549176|ref|NP_001164521.1| DNA methyltransferase 1a [Nasonia vitripennis] Length = 1349 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 29/65 (44%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++A ++GVPQ R R+ I+ V K+P PL + + L ID+K W Sbjct: 1039 LQAGNYGVPQTRRRMIILAAAPGEVLPKYPNPLHVFSKSACNLSVVIDNKKYFPTYDWVE 1098 Query: 61 HQKRK 65 K Sbjct: 1099 SAPYK 1103 >gi|325690436|gb|EGD32439.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis SK115] Length = 390 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 31/97 (31%), Gaps = 4/97 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + D+GV Q RER+Y + L + P L ++ + ++ + Sbjct: 151 NSKDYGVAQNRERVYTLGHLRSRGRRQVLPVRRESSSHLKQLIGGMQSYRVYDTSGISTT 210 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNT---LSARY 94 + TNT ++ARY Sbjct: 211 LVGEGGGVGAKTGLYMIDQSLTAPKVTNTARCITARY 247 >gi|307193684|gb|EFN76367.1| DNA (cytosine-5)-methyltransferase 1 [Harpegnathos saltator] Length = 1460 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 28/59 (47%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 ++A ++GVPQ R RL I+ +P P + R L +D++ SN W+ Sbjct: 1096 LQAGNYGVPQTRRRLIILAAAPGETLPCYPEPTNVFTRRCCRLSVVVDNRKYSSNCAWK 1154 >gi|311977229|gb|ADQ20489.1| M.AspCNI [Acinetobacter sp. 1690] Length = 327 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRL 39 D+GV Q RER+ I+ VEF+ P Sbjct: 149 NFADYGVAQLRERVLIVGVRKDLDVEFEAPKKTHSPDSY 187 >gi|312903177|ref|ZP_07762357.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0635] gi|310633053|gb|EFQ16336.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0635] Length = 398 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 2/55 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTIS 54 + + D+ VPQ RER++II FP + ++ + K T Sbjct: 147 LNSKDY-VPQNRERVFIIGHLRGERTRKVFPLEKKNGTTAKNNIKPINNSKKTRE 200 >gi|308062818|gb|ADO04706.1| site-specific DNA-methyltransferase [Helicobacter pylori Cuz20] Length = 418 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + + +G +RERL I+ N F FP P + D + +D K ++ Sbjct: 214 LNSAWYGSATKRERLIIVAIRNDLPFNFTFPKPTHL----SDEINTKLDFKDLPTS 265 >gi|170718974|ref|YP_001784137.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] gi|168827103|gb|ACA32474.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] Length = 323 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 6/85 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + + +GVPQ RER+Y + ++FP KP I DD+ ++ Sbjct: 148 LDSQFYGVPQMRERVYFVGIRKDIKHKPYQFPEMEDAKP----ISYYLSDDRDYTFDENN 203 Query: 59 EGHQKRKENNKIAGKGFGYGLFFEN 83 E QK N G+ + + Sbjct: 204 ETFQKYLNNKYNQGQNNLTEILQTD 228 >gi|311977245|gb|ADQ20501.1| M2.BfuAI [Lysinibacillus fusiformis] Length = 342 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK 36 + D+GVPQ RER++II E FP P + Sbjct: 156 LNMADYGVPQLRERVFIIGNRLGH-EVNFPLPTHSE 190 >gi|254673893|emb|CBA09676.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis alpha275] Length = 326 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHID 48 + A DFGVPQ R R+ I + FP PL +G + Sbjct: 155 LSAADFGVPQIRSRVIFIG-RRDKGKISFPEPLQISHQTVGSAIGHFPK 202 >gi|1808696|gb|AAC00045.1| putative type II 5-cytosoine methyltransferase [Corynebacterium glutamicum] Length = 363 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLG 34 ++GVPQ RER+ I+ + +FK P P Sbjct: 152 NFAEYGVPQFRERVLIVGIRRDTGFDFKHPAPTH 185 >gi|319638577|ref|ZP_07993339.1| modification methylase NgoFVII [Neisseria mucosa C102] gi|317400326|gb|EFV80985.1| modification methylase NgoFVII [Neisseria mucosa C102] Length = 374 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKP 37 +FGVPQ RER+ I+ + +F P P + Sbjct: 160 NFAEFGVPQFRERVLIVGVRLDTGFDFHHPEPTHNET 196 >gi|206972356|ref|ZP_03233302.1| modification methylase [Bacillus cereus AH1134] gi|206732681|gb|EDZ49857.1| modification methylase [Bacillus cereus AH1134] Length = 309 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 36/102 (35%), Gaps = 19/102 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPL-----GIKPRLGDILEEHIDDKSTISN 55 + DF +PQ+R+RL++I F F P P + + DI E + D Sbjct: 154 LDTFDFNLPQKRKRLFVIGFKK---SFSMPDPTQFQFFHRQLTIKDIKETNPD---FSIP 207 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKD 97 + K + + + NT A Y +D Sbjct: 208 NYVKFRIDGKYRDLPS--------VKGDDDIGNTCVAHYARD 241 >gi|153008840|ref|YP_001370055.1| DNA-cytosine methyltransferase [Ochrobactrum anthropi ATCC 49188] gi|151560728|gb|ABS14226.1| DNA-cytosine methyltransferase [Ochrobactrum anthropi ATCC 49188] Length = 414 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 33/99 (33%), Gaps = 7/99 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A GVPQ R+RL + FP PL + + D L + + + Sbjct: 243 LDAQWLGVPQARQRLIFMGVREDLGLNPVFPKPLSYRYSISDALPWLTNGIAVTVEAEAD 302 Query: 60 GHQKRKENNKIAGKGFG-----YGLFFEN-SATTNTLSA 92 + G + L + + + T++A Sbjct: 303 IGRFAIGEEWDKLNPGGQSDRYFQLVRPDPNEPSPTITA 341 >gi|317180612|dbj|BAJ58398.1| Type II modification enzyme [Helicobacter pylori F32] Length = 327 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 32/101 (31%), Gaps = 11/101 (10%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLG--IKPRLGDILEEHIDD------KST 52 A D+GV Q R R++ I F V + FP K L D++ + D K+ Sbjct: 145 NAKDYGVAQERLRVFYIGFRKDLKVNYIFPKGSTHLKKLTLKDVIWDLKDSVVCALAKNK 204 Query: 53 ISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + H+ + T+ A Sbjct: 205 RNPNAINNHEYFIGSYSPIFMS--RNRVKNWDEQAFTIQAS 243 >gi|225076231|ref|ZP_03719430.1| hypothetical protein NEIFLAOT_01268 [Neisseria flavescens NRL30031/H210] gi|224952355|gb|EEG33564.1| hypothetical protein NEIFLAOT_01268 [Neisseria flavescens NRL30031/H210] Length = 374 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKP 37 +FGVPQ RER+ I+ + +F P P + Sbjct: 160 NFAEFGVPQFRERVLIVGVRLDTGFDFHHPEPTHNET 196 >gi|315586485|gb|ADU40866.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A] gi|317178791|dbj|BAJ56579.1| Type II modification enzyme [Helicobacter pylori F30] Length = 327 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 32/101 (31%), Gaps = 11/101 (10%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLG--IKPRLGDILEEHIDD------KST 52 A D+GV Q R R++ I F + + FP K L D++ + D K+ Sbjct: 145 NAKDYGVAQERLRVFYIGFRKDLKINYIFPKGSTHLKKLTLKDVIWDLKDSVVCALAKNK 204 Query: 53 ISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + H+ + T+ A Sbjct: 205 RNPNAINNHEYFIGSYSPIFMS--RNRVKNWDEQAFTIQAS 243 >gi|217034513|ref|ZP_03439924.1| hypothetical protein HP9810_873g29 [Helicobacter pylori 98-10] gi|216943054|gb|EEC22533.1| hypothetical protein HP9810_873g29 [Helicobacter pylori 98-10] Length = 327 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 32/101 (31%), Gaps = 11/101 (10%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLG--IKPRLGDILEEHIDD------KST 52 A D+GV Q R R++ I F + + FP K L D++ + D K+ Sbjct: 145 NAKDYGVAQERLRVFYIGFRKDLKINYIFPKGSTHLKKLTLKDVIWDLKDSVVCALAKNK 204 Query: 53 ISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + H+ + T+ A Sbjct: 205 RNPNAINNHEYFIGSYSPIFMS--RNRVKNWDEQAFTIQAS 243 >gi|308063355|gb|ADO05242.1| site-specific DNA methyltransferase [Helicobacter pylori Sat464] Length = 327 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 32/101 (31%), Gaps = 11/101 (10%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLG--IKPRLGDILEEHIDD------KST 52 A D+GV Q R R++ I F + + FP K L D++ + D K+ Sbjct: 145 NAKDYGVAQERLRVFYIGFRKDLKINYIFPKGSTHLKKLTLKDVIWDLKDSVVCALAKNK 204 Query: 53 ISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + H+ + T+ A Sbjct: 205 RNPNAINNHEYFIGSYSPIFMS--RNRVKNWDEQAFTIQAS 243 >gi|30089875|ref|NP_839905.1| putative methylase [Lactococcus phage P335 sensu lato] gi|21954664|gb|AAM83053.1|AF489521_14 putative methylase [Lactococcus phage 4268] Length = 185 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 16/23 (69%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + + +FGVPQ RER++II L Sbjct: 149 LNSKNFGVPQNRERVFIIGHLRG 171 >gi|20530828|gb|AAM27270.1|AF507962_1 methyl transferase [Lactococcus lactis] Length = 185 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 16/23 (69%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + + +FGVPQ RER++II L Sbjct: 149 LNSKNFGVPQNRERVFIIGHLRG 171 >gi|62390655|ref|YP_226057.1| modification methylase [Corynebacterium glutamicum ATCC 13032] gi|21324545|dbj|BAB99169.1| Site-specific DNA methylase or type II 5-cytosine methyltransferase [Corynebacterium glutamicum ATCC 13032] gi|41325993|emb|CAF20156.1| MODIFICATION METHYLASE [Corynebacterium glutamicum ATCC 13032] Length = 363 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 26/92 (28%), Gaps = 10/92 (10%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLG------IKPRLGDILEEHIDDKSTIS 54 ++GVPQ RER+ I+ + +FK P P G+ L+ K + Sbjct: 152 NFAEYGVPQFRERVLIVGIRRDTGFDFKHPAPTHGPRGDMPYKTAGEALKGV---KDVPT 208 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENSAT 86 N R Sbjct: 209 NNNHMKIMPRTVEVLKRIPEGENFTAIPKDDP 240 >gi|19552978|ref|NP_600980.1| site-specific DNA methylase or [Corynebacterium glutamicum ATCC 13032] Length = 356 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 26/92 (28%), Gaps = 10/92 (10%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLG------IKPRLGDILEEHIDDKSTIS 54 ++GVPQ RER+ I+ + +FK P P G+ L+ K + Sbjct: 145 NFAEYGVPQFRERVLIVGIRRDTGFDFKHPAPTHGPRGDMPYKTAGEALKGV---KDVPT 201 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENSAT 86 N R Sbjct: 202 NNNHMKIMPRTVEVLKRIPEGENFTAIPKDDP 233 >gi|188527304|ref|YP_001909991.1| site-specific DNA methyltransferase [Helicobacter pylori Shi470] gi|188143544|gb|ACD47961.1| site-specific DNA methyltransferase [Helicobacter pylori Shi470] Length = 327 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 32/101 (31%), Gaps = 11/101 (10%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLG--IKPRLGDILEEHIDD------KST 52 A D+GV Q R R++ I F + + FP K L D++ + D K+ Sbjct: 145 NAKDYGVAQERLRVFYIGFRKDLKINYIFPKGSTHLKKLTLKDVIWDLKDSVVCALAKNK 204 Query: 53 ISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + H+ + T+ A Sbjct: 205 RNPNAINNHEYFIGSYSPIFMS--RNRVKNWDEQAFTIQAS 243 >gi|282901524|ref|ZP_06309446.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii CS-505] gi|281193567|gb|EFA68542.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii CS-505] Length = 436 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 16/30 (53%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFP 30 + A DFGV Q R RL ++ + + +P Sbjct: 164 LNAADFGVAQNRSRLILLGWRKDMPKPVYP 193 >gi|270293678|ref|ZP_06199880.1| cytosine-specific methyltransferase [Bacteroides sp. D20] gi|270275145|gb|EFA21005.1| cytosine-specific methyltransferase [Bacteroides sp. D20] Length = 361 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHI 47 + A ++GVPQRR R++++ N ++F+FP P K + + + + Sbjct: 152 LWADEYGVPQRRMRMFMVG-NNQGIDFEFPKPFDYKVSVEEAIGDLP 197 >gi|315162212|gb|EFU06229.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0645] Length = 398 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 2/55 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTIS 54 + + D+ VPQ RER++II FP + + + K T Sbjct: 147 LNSKDY-VPQNRERVFIIGHLRGERTRKVFPFERKNGTTAKNNIRPINNSKKTRE 200 >gi|197105892|ref|YP_002131269.1| DNA (cytosine-5-)-methyltransferase protein [Phenylobacterium zucineum HLK1] gi|196479312|gb|ACG78840.1| DNA (cytosine-5-)-methyltransferase protein [Phenylobacterium zucineum HLK1] Length = 508 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLG 34 + A +GVPQ RER+ +I VE +FP P Sbjct: 198 LNAAFYGVPQMRERMILIATRRELGVEIRFPAPTH 232 >gi|22538008|ref|NP_688859.1| prophage LambdaSa2, type II DNA modification methyltransferase [Streptococcus agalactiae 2603V/R] gi|22534910|gb|AAN00732.1|AE014276_13 prophage LambdaSa2, type II DNA modification methyltransferase, putative [Streptococcus agalactiae 2603V/R] Length = 437 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 32/108 (29%), Gaps = 19/108 (17%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILEEHIDD-------KS 51 + +FGVPQ RER++II L F F + + + +++ + Sbjct: 148 NSKNFGVPQNRERVFIIGHLRGEGTRPIFPFESSITENYPIHTRKIGNVNPSGNGMNGEV 207 Query: 52 TISNKLWEGHQKRKENNKIAGKGFGYGL---------FFENSATTNTL 90 S L K L ++ T+ Sbjct: 208 YDSEGLSPTLTTNKGEGVKIAVNVVGRLPGKFEMPNRVYDPDGLAPTI 255 >gi|257081612|ref|ZP_05575973.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis E1Sol] gi|256989642|gb|EEU76944.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis E1Sol] Length = 398 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 2/55 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTIS 54 + + D+ VPQ RER++II FP + ++ + K T Sbjct: 147 LNSKDY-VPQNRERVFIIGHLRGERTRKVFPLERKNGTTAKNNIKPINNSKKTRE 200 >gi|313676237|ref|YP_004054233.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] gi|312942935|gb|ADR22125.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] Length = 448 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 42/119 (35%), Gaps = 27/119 (22%) Query: 1 MKACDFGVPQRRERLYIIDFLN---------------PSVEFK-FPTPLGIKPRLGDILE 44 + + D+GVPQ RER++ I F +P+P + L+ Sbjct: 239 LHSADYGVPQSRERVFFIGIKKSALKKEALEALSNDYIPSAFDPYPSPTHSFTKDEPYLK 298 Query: 45 EHID--------DKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYY 95 + + ++ S+ L + H + + GK + + T+ A ++ Sbjct: 299 KPVSLNDILNGLEEPEQSDDLSQRHYSKAKF---MGKHCQGQTEVKLNHIGPTIRAEHH 354 >gi|15901190|ref|NP_345794.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae TIGR4] gi|14972819|gb|AAK75434.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae TIGR4] Length = 407 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDIL 43 + + DFGVP+ RER++II FP + + L Sbjct: 149 LNSKDFGVPKNRERVFIIGHSRKKGTRLLFPFRREGQATNSETL 192 >gi|109946897|ref|YP_664125.1| site-specific DNA-methyltransferase [Helicobacter acinonychis str. Sheeba] gi|109714118|emb|CAJ99126.1| site-specific DNA-methyltransferase [Helicobacter acinonychis str. Sheeba] Length = 418 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + + +G +RERL I+ N F FP P + D + +D K ++ Sbjct: 214 LNSAWYGSATKRERLIIVAIRNDLPFNFAFPKPTHLN----DEINTKLDFKDLPTS 265 >gi|310817513|ref|YP_003949871.1| cytosine-specific methyltransferase [Stigmatella aurantiaca DW4/3-1] gi|309390585|gb|ADO68044.1| Cytosine-specific methyltransferase [Stigmatella aurantiaca DW4/3-1] Length = 332 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLN-PSVEFKFPTPLGIKPRLGDIL 43 + A D+GVPQ R R ++ + F +P P +G+ + Sbjct: 153 LNASDYGVPQLRPRFILVALRPVAATHFIWPKAQREIPTVGNTI 196 >gi|115373224|ref|ZP_01460525.1| modification methylase NaeI [Stigmatella aurantiaca DW4/3-1] gi|115369825|gb|EAU68759.1| modification methylase NaeI [Stigmatella aurantiaca DW4/3-1] Length = 303 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLN-PSVEFKFPTPLGIKPRLGDIL 43 + A D+GVPQ R R ++ + F +P P +G+ + Sbjct: 124 LNASDYGVPQLRPRFILVALRPVAATHFIWPKAQREIPTVGNTI 167 >gi|15828514|ref|NP_325874.1| CpG DNA methylase (cytosine-specific methyltransferase) [Mycoplasma pulmonis UAB CTIP] gi|14089456|emb|CAC13216.1| CPG DNA METHYLASE (CYTOSINE-SPECIFIC METHYLTRANSFERASE) [Mycoplasma pulmonis] Length = 296 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 31/104 (29%), Gaps = 12/104 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDD----------- 49 + + D+ Q R+R +++ +FK+P K L +L Sbjct: 116 LNSADYNSCQNRQRFFMVSSF-DLSKFKWPEKRSRKKDLSTLLNNKYTKTQDYEKFEFLL 174 Query: 50 KSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 K S + K + K + TL+A Sbjct: 175 KHQRSEFSITKNNIWKSHIKNYTNFNSEAFLYLPKEVGPTLTAS 218 >gi|296329951|ref|ZP_06872435.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676676|ref|YP_003868348.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp. spizizenii str. W23] gi|296152990|gb|EFG93855.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414920|gb|ADM40039.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp. spizizenii str. W23] Length = 488 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 7/65 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-----IKPRLGDILEEHID-DKSTIS 54 + A DFGVPQ R R++II + P +G+I + K +IS Sbjct: 183 LNAADFGVPQHRRRIFIIANRLGIDSPRL-KPTHGPEGFPYKTVGEIQHLPVRLPKISIS 241 Query: 55 NKLWE 59 KL Sbjct: 242 EKLKN 246 >gi|159899163|ref|YP_001545410.1| C-5 cytosine-specific DNA methylase [Herpetosiphon aurantiacus ATCC 23779] gi|159892202|gb|ABX05282.1| C-5 cytosine-specific DNA methylase [Herpetosiphon aurantiacus ATCC 23779] Length = 362 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 14/33 (42%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 A D+G PQ R+R+ I+ P P Sbjct: 297 NAADYGTPQLRKRIIILGCKQDLGFVNLPLPTH 329 >gi|147668731|ref|YP_001213549.1| DNA-cytosine methyltransferase [Dehalococcoides sp. BAV1] gi|146269679|gb|ABQ16671.1| DNA-cytosine methyltransferase [Dehalococcoides sp. BAV1] Length = 335 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 1 MKACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLGIKPRLGDILEEHID 48 + A D+ VPQ R+R+ I+ + + F P P+ KP L D + + + Sbjct: 143 LNAHDYSVPQDRKRVIIVGYHVKTELYFTPPKPIAHKPLLRDAIWDLRE 191 >gi|317011768|gb|ADU85515.1| site-specific DNA-methyltransferase [Helicobacter pylori SouthAfrica7] Length = 236 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + + +G +RERL I+ N F FP P + D + +D K ++ Sbjct: 32 LNSAWYGSATKRERLIIVAIRNDLPFNFIFPKPTHL----SDEINTKLDFKDLPTS 83 >gi|210617281|ref|ZP_03291507.1| hypothetical protein CLONEX_03729 [Clostridium nexile DSM 1787] gi|210149385|gb|EEA80394.1| hypothetical protein CLONEX_03729 [Clostridium nexile DSM 1787] Length = 455 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 1/85 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DFGVPQ R+R+YI+ +L+ P P L I + L Sbjct: 176 LNSKDFGVPQARKRVYIVGYLDFRCAGKILPEPETNGAALVQIRAGSQGKRVYSPKGLSC 235 Query: 60 GHQKRKENNKIAGKGFGYGLFFENS 84 + + G+ + + Sbjct: 236 TLTSQAGGMGGKTGLYDVGVPIKEN 260 >gi|255279956|ref|ZP_05344511.1| modification methylase AgeI [Bryantella formatexigens DSM 14469] gi|255269729|gb|EET62934.1| modification methylase AgeI [Bryantella formatexigens DSM 14469] Length = 475 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 15/35 (42%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A DFGVPQ RERL I K + Sbjct: 247 LNAKDFGVPQNRERLIYIGNRKGIDNKKIFKEINK 281 >gi|168485680|ref|ZP_02710188.1| modification methylase HaeIII (Cytosine-specificmethyltransferase HaeIII) (M.HaeIII) [Streptococcus pneumoniae CDC1087-00] gi|183571278|gb|EDT91806.1| modification methylase HaeIII (Cytosine-specificmethyltransferase HaeIII) (M.HaeIII) [Streptococcus pneumoniae CDC1087-00] Length = 363 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 5/48 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-----FKFPTPLGIKPRLGDIL 43 + D+GVPQ R+RL + ++ P+ D+L Sbjct: 152 LNTADYGVPQSRKRLVLHGIRKEILDNTNLTLNLPSKTHSNIPELDLL 199 >gi|111656823|ref|ZP_01407675.1| hypothetical protein SpneT_02001911 [Streptococcus pneumoniae TIGR4] gi|148994722|ref|ZP_01823806.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae SP9-BS68] gi|148999034|ref|ZP_01826467.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae SP11-BS70] gi|307067986|ref|YP_003876952.1| site-specific DNA methylase [Streptococcus pneumoniae AP200] gi|147755157|gb|EDK62211.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae SP11-BS70] gi|147927053|gb|EDK78094.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae SP9-BS68] gi|306409523|gb|ADM84950.1| Site-specific DNA methylase [Streptococcus pneumoniae AP200] gi|332074668|gb|EGI85142.1| modification methylase HpaII [Streptococcus pneumoniae GA17545] gi|332200781|gb|EGJ14853.1| modification methylase HpaII [Streptococcus pneumoniae GA41317] gi|332201799|gb|EGJ15869.1| modification methylase HpaII [Streptococcus pneumoniae GA47368] Length = 392 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDIL 43 + + DFGVP+ RER++II FP + + L Sbjct: 134 LNSKDFGVPKNRERVFIIGHSRKKGTRLLFPFRREGQATNSETL 177 >gi|304388871|ref|ZP_07370921.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] gi|302028149|gb|ADK90963.1| unknown [Neisseria meningitidis] gi|304337164|gb|EFM03348.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] gi|316985914|gb|EFV64853.1| modification methylase HphIA [Neisseria meningitidis H44/76] gi|325143322|gb|EGC65656.1| cytosine-specificmethyltransferase HphIA [Neisseria meningitidis 961-5945] Length = 276 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHID 48 + A DFGVPQ R R+ I + FP PL +G + Sbjct: 155 LSAADFGVPQIRSRVIFIG-RRDKGKISFPEPLQISHQTVGSAIGHFPK 202 >gi|148252729|ref|YP_001237314.1| putative 5-methylcytosine methyltransferase [Bradyrhizobium sp. BTAi1] gi|146404902|gb|ABQ33408.1| putative 5-methylcytosine methyltransferase [Bradyrhizobium sp. BTAi1] Length = 381 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 3/50 (6%) Query: 1 MKACDFGVPQRRERLYIIDF---LNPSVEFKFPTPLGIKPRLGDILEEHI 47 + A DFGVPQ R R++I+ F + P + P L + Sbjct: 179 INARDFGVPQNRRRVFILGFDRRRVDEMNTWPPKATHVSPDALGELPHWV 228 >gi|225375779|ref|ZP_03753000.1| hypothetical protein ROSEINA2194_01411 [Roseburia inulinivorans DSM 16841] gi|225212376|gb|EEG94730.1| hypothetical protein ROSEINA2194_01411 [Roseburia inulinivorans DSM 16841] Length = 431 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 9/89 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-----FPTPLGIKPRLGDILEEHIDDKSTISN 55 + + DFGVPQ R+R+YI+ + +F+ P P L + + Sbjct: 150 LNSKDFGVPQARKRVYIVGY----FDFRCAGKVLPEPETNGAALVQVRAGSQGKRVYSPK 205 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFFENS 84 L + + G+ + + Sbjct: 206 GLSCTLTSQAGGMGGKTGLYDVGVPIKEN 234 >gi|153854028|ref|ZP_01995361.1| hypothetical protein DORLON_01352 [Dorea longicatena DSM 13814] gi|149753410|gb|EDM63341.1| hypothetical protein DORLON_01352 [Dorea longicatena DSM 13814] Length = 468 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 9/89 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-----FPTPLGIKPRLGDILEEHIDDKSTISN 55 + + DFGVPQ R+R+YI+ + +F+ P P L + + Sbjct: 187 LNSKDFGVPQARKRVYIVGY----FDFRCAGKVLPEPETNGAALVQVRAGSQGKRVYSPK 242 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFFENS 84 L + + G+ + + Sbjct: 243 GLSCTLTSQAGGMGGKTGLYDVGVPIKEN 271 >gi|158339669|ref|YP_001520676.1| C-5 cytosine-specific DNA methylase [Acaryochloris marina MBIC11017] gi|158309910|gb|ABW31526.1| C-5 cytosine-specific DNA methylase [Acaryochloris marina MBIC11017] Length = 382 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 9/96 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPT-PLGIKPRLGDILEEHIDDKSTISNKLW 58 + A DFGVPQRR R++II + FP I +G+ + + ++ + T Sbjct: 154 LDASDFGVPQRRLRIFIIGSRLDLGWKPIFPKSKTKIPLTVGEAISDLLELQPTAMP--- 210 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARY 94 + + K Y S + RY Sbjct: 211 --LKLKSSGPKQKDCELPYRSA-PESGYQR-IMRRY 242 >gi|261415336|ref|YP_003249019.1| DNA-cytosine methyltransferase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371792|gb|ACX74537.1| DNA-cytosine methyltransferase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326638|gb|ADL25839.1| cytosine specific DNA methyltransferase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 418 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 16/97 (16%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 A ++G PQ+RER+ II + S + TP + L ++ + + N L E Sbjct: 191 NAANYGAPQKRERIVIICSRDGSKA-PYLTPTHSETGLFNLPKWRTVSEVL--NDLDENV 247 Query: 62 QKRKENNKIAGKGFGYGLFFENSATTNTLSAR-YYKD 97 Q+ + ++ K F L A Y+KD Sbjct: 248 QEYSKFSEKRLKFFRM------------LKAGQYWKD 272 >gi|51245886|ref|YP_065770.1| modification methylase [Desulfotalea psychrophila LSv54] gi|50876923|emb|CAG36763.1| probable modification methylase [Desulfotalea psychrophila LSv54] Length = 360 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 3/56 (5%) Query: 5 DFGVPQRRERLYIIDFLNP-SVEFKFPTPL--GIKPRLGDILEEHIDDKSTISNKL 57 ++GVPQ R R+ I+ + EFK P P G+ L + + + Sbjct: 167 EYGVPQARHRIIIVGIRKDLNTEFKVPAPTTPNQYKSSGEALTCPPIPEDAPNQER 222 >gi|269797252|ref|YP_003311152.1| DNA-cytosine methyltransferase [Veillonella parvula DSM 2008] gi|269093881|gb|ACZ23872.1| DNA-cytosine methyltransferase [Veillonella parvula DSM 2008] Length = 423 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 29/102 (28%), Gaps = 11/102 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--------SVEFKFPTPLGIKPRLGDILEEH---IDD 49 + A DFGV Q RER+ I+ + + P L L Sbjct: 196 INANDFGVSQNRERVIIVGHRKDLLFNKSFFDYLYNYVEPSPKLKELFADLPNIRAGKSS 255 Query: 50 KSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 K N + + QK +N +N L Sbjct: 256 KKYCCNYVSKYVQKYIRSNDDILTQHIARPHSKNDLRIYKLV 297 >gi|288904476|ref|YP_003429697.1| DNA methylase [Streptococcus gallolyticus UCN34] gi|288731201|emb|CBI12749.1| Putative DNA methylase [Streptococcus gallolyticus UCN34] Length = 366 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 16/23 (69%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + + DFGVPQ RER+++I L Sbjct: 147 LNSKDFGVPQNRERVFLIGHLRG 169 >gi|229188078|ref|ZP_04315163.1| Cytosine-specific methyltransferase [Bacillus cereus BGSC 6E1] gi|228595388|gb|EEK53123.1| Cytosine-specific methyltransferase [Bacillus cereus BGSC 6E1] Length = 318 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 28/95 (29%), Gaps = 3/95 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE- 59 + A FGVP RER++ I L F F R E+ D S L Sbjct: 140 LDARKFGVPHARERVFCISLLGGKA-FDFNKLRFKPMRDIKEFMEYGPDDEIPSQYLINI 198 Query: 60 -GHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + G T++ R Sbjct: 199 PSMLNKIKEFNPNPTGSYKRQLDVIDQYCYTITER 233 >gi|228474527|ref|ZP_04059258.1| site-specific DNA methylase [Staphylococcus hominis SK119] gi|228271190|gb|EEK12558.1| site-specific DNA methylase [Staphylococcus hominis SK119] Length = 414 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKS 51 + A D+GVPQ RER+ II FP + P ++ D+ Sbjct: 149 LNAADYGVPQARERVIIIGNRIGVEN-PFPVISHVAPDDNLSFFDYKSDEE 198 >gi|318042684|ref|ZP_07974640.1| DNA-cytosine methyltransferase [Synechococcus sp. CB0101] Length = 361 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 4/79 (5%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP---RLGDILEEHIDDKSTISNKLW 58 + DFG+ Q R R ++ + F+F +P + D++ + S S Sbjct: 152 NSADFGLAQTRHRFMLVGIRRD-IGFRFLSPPPTVQKWATVRDVIGDMPPPPSDCSEHPD 210 Query: 59 EGHQKRKENNKIAGKGFGY 77 + + + K + F Y Sbjct: 211 FFNHAQTKITKRNIERFSY 229 >gi|240117500|ref|ZP_04731562.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae PID1] gi|268603200|ref|ZP_06137367.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID1] gi|268587331|gb|EEZ52007.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID1] Length = 374 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKP 37 +FGVPQ RER+ I+ + +F+ P P + Sbjct: 160 NFTEFGVPQFRERVLIVGVRLDTGFDFRHPEPTHNET 196 >gi|218905512|ref|YP_002453346.1| modification methylase ScrFIB [Bacillus cereus AH820] gi|218536933|gb|ACK89331.1| modification methylase ScrFIB [Bacillus cereus AH820] Length = 324 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 28/95 (29%), Gaps = 3/95 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE- 59 + A FGVP RER++ I L F F R E+ D S L Sbjct: 146 LDARKFGVPHARERVFCISLLGGKA-FDFNKLRFKPMRDIKEFMEYGPDDKIPSQYLINI 204 Query: 60 -GHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + G T++ R Sbjct: 205 PSMLNKIKEFNPNPTGSYKRQLDVIDQYCYTITER 239 >gi|111220172|ref|YP_710966.1| putative DNA modification methylase [Frankia alni ACN14a] gi|111147704|emb|CAJ59362.1| putative DNA Modification methylase (Cytosine-specific methyltransferase) [Frankia alni ACN14a] Length = 401 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A ++GVPQRR+R +I + P P +P+ + T+ + + + Sbjct: 191 LNAANYGVPQRRQRTIVIGSRIGEP--ELPAPTHQEPQEQAAFFSDLPPWRTVRDAISD 247 >gi|317179735|dbj|BAJ57523.1| Type II DNA modification enzyme [Helicobacter pylori F30] Length = 418 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + + +G +RERL I+ N F FP P + D + +D K ++ Sbjct: 214 LNSAWYGSATKRERLIIVAIKNDLPFNFTFPKPTHL----SDEINTKLDFKDLPTS 265 >gi|309790027|ref|ZP_07684601.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides DG6] gi|308227882|gb|EFO81536.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides DG6] Length = 438 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 26/74 (35%), Gaps = 3/74 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP--LGIKPRLGDILEEHIDDKSTISNKLW 58 + A D+GVPQRR+RL+I ++P + D + + + ++ Sbjct: 211 LNAVDYGVPQRRQRLFIQGNRLGQ-NIRWPKIETTNRFVTVRDAISDLPNRTPPSLEEIL 269 Query: 59 EGHQKRKENNKIAG 72 + Sbjct: 270 PYQPQHSLTEYQKK 283 >gi|153940750|ref|YP_001392502.1| hypothetical protein CLI_3290 [Clostridium botulinum F str. Langeland] gi|152936646|gb|ABS42144.1| conserved domain protein [Clostridium botulinum F str. Langeland] Length = 338 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 12/23 (52%), Positives = 16/23 (69%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + + DFGVPQ RER++II L Sbjct: 151 INSRDFGVPQNRERVFIIGHLRE 173 >gi|113478170|ref|YP_724231.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] gi|110169218|gb|ABG53758.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] Length = 379 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 31/89 (34%), Gaps = 4/89 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTP---LGIKPRLGDILEEHIDDKSTISNKL 57 D+GVPQ RER+ ++ + F P+P +G K + + + +N Sbjct: 159 NFADYGVPQFRERVILVGIRMDTGFNFIHPSPEYGIGRKYTYITAGKALKNVEKVPNNNE 218 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSAT 86 + Q R K G + Sbjct: 219 HQKIQPRTIEILKRIKAGGNFTDIPKDSP 247 >gi|254671508|emb|CBA09095.1| site-specific DNA-methyltransferase [Neisseria meningitidis alpha153] Length = 258 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHID 48 + A DFGVPQ R R+ I + FP PL +G + Sbjct: 137 LSAADFGVPQIRSRVIFIG-RRDKGKISFPEPLQISHQTVGSAIGHFPK 184 >gi|110799652|ref|YP_695464.1| DNA-cytosine methyltransferase [Clostridium perfringens ATCC 13124] gi|110674299|gb|ABG83286.1| DNA-cytosine methyltransferase [Clostridium perfringens ATCC 13124] Length = 446 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDIL 43 A D+GVPQ RER+++I E + +P + R + + Sbjct: 187 AADYGVPQNRERVFLIGINKMYGENPYIYPEKTHGEGRKFEYI 229 >gi|60202519|gb|AAX14651.1| BbvCI methyltransferase 2 [Brevibacillus brevis] Length = 396 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 ++A D+GVPQ R RL+++ +P FP Sbjct: 154 LQAADYGVPQLRSRLFVVGSRHPIAN-PFPNKTHS 187 >gi|127486|sp|P23737|MTS9_STAAU RecName: Full=Modification methylase Sau96I; Short=M.Sau96I; AltName: Full=Cytosine-specific methyltransferase Sau96I gi|581567|emb|CAA37260.1| Sau96I DNA methyltransferase [Staphylococcus aureus] gi|329730456|gb|EGG66846.1| DNA-binding helix-turn-helix protein [Staphylococcus aureus subsp. aureus 21193] Length = 430 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-----FKFPTPLGIKPRLGDILEEHIDDKST 52 + + ++ V Q+RER+ II V+ F+FP KP L D+L++ K T Sbjct: 245 LNSWNYDVAQKRERIVIIGIREDLVKEQKYPFRFPLAQVYKPVLKDVLKDVPKSKVT 301 >gi|144900416|emb|CAM77280.1| modification methylase MthTI [Magnetospirillum gryphiswaldense MSR-1] Length = 356 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 15/25 (60%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV 25 + AC +GVPQ RER +II + Sbjct: 161 LNACHYGVPQSRERAFIIGYRRDLG 185 >gi|323454079|gb|EGB09949.1| hypothetical protein AURANDRAFT_62427 [Aureococcus anophagefferens] Length = 634 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 8/91 (8%) Query: 8 VPQRRERLYIIDFLNPSV---EFKFPTPLGIKPR-LGDILEEHIDDKSTISNKLWEGHQK 63 +PQ RER+YI+ F++P PR + D+LE+ D + + Sbjct: 353 LPQARERVYIVAIRADLAAARRFRWPALERRGPRSIRDVLEDPPDAERHRVPRAL----Y 408 Query: 64 RKENNKIAGKGFGYGLFFENSATTNTLSARY 94 R + F + NT+ A Y Sbjct: 409 RSVVDSAYHAARPRARFPDVDGPANTVRATY 439 >gi|332359910|gb|EGJ37724.1| C-5 cytosine-specific DNA methylase superfamily protein [Streptococcus sanguinis SK1056] Length = 516 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 19/38 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 + A +FGVPQ+R R+ + + N ++P P Sbjct: 182 LNAANFGVPQQRNRVVFLAYRNDVAPLQYPESDNDIPN 219 >gi|283956744|ref|ZP_06374220.1| hypothetical protein C1336_000290019 [Campylobacter jejuni subsp. jejuni 1336] gi|283791719|gb|EFC30512.1| hypothetical protein C1336_000290019 [Campylobacter jejuni subsp. jejuni 1336] Length = 330 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + D+ + Q R R++I+ + + F FP + + ++++ K+ +K+ Sbjct: 155 LNTKDYSIAQNRSRIFIVGTIKKN-SFIFPKKENSQISIKKVIDDLPKLKNGEKSKI 210 >gi|154502686|ref|ZP_02039746.1| hypothetical protein RUMGNA_00499 [Ruminococcus gnavus ATCC 29149] gi|153796569|gb|EDN78989.1| hypothetical protein RUMGNA_00499 [Ruminococcus gnavus ATCC 29149] Length = 458 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 1/62 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DFGVPQ R+R+Y++ +L+ P P L + ++ + L Sbjct: 179 LNSKDFGVPQSRKRVYLVGYLDRRCAGKILPFPTANGTPLVQVQTGRQGERIYKAEGLSC 238 Query: 60 GH 61 Sbjct: 239 TL 240 >gi|257069715|ref|YP_003155970.1| DNA-methyltransferase Dcm [Brachybacterium faecium DSM 4810] gi|256560533|gb|ACU86380.1| DNA-methyltransferase Dcm [Brachybacterium faecium DSM 4810] Length = 431 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 19/40 (47%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG 40 ++A DFG PQ R+R+ ++ ++P+ + Sbjct: 160 LQAADFGTPQSRKRVIVMGSRKDVTLPEYPSVTHAPRTIK 199 >gi|317127846|ref|YP_004094128.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] gi|315472794|gb|ADU29397.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] Length = 564 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEF----KFPTPL 33 + A ++GVPQ+R RL+II V+ P P+ Sbjct: 325 LNAANYGVPQQRRRLFIIGVREDLVKKGRRVTLPEPI 361 >gi|260221505|emb|CBA30136.1| hypothetical protein Csp_C22040 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 191 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 M A +FG PQ R RL++I L P P + DIL DD+ + Sbjct: 1 MNAAEFGAPQSRVRLFLIGGLGLPPPEIRPEPSVKRMTARDIL--DPDDRWKFTP 53 >gi|170077471|ref|YP_001734109.1| site-specific DNA-methyltransferase [Synechococcus sp. PCC 7002] gi|169885140|gb|ACA98853.1| site-specific DNA-methyltransferase [Synechococcus sp. PCC 7002] Length = 413 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 17/34 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 + D+G PQRR+RL ++ + +P P Sbjct: 158 LNGADYGAPQRRKRLILLGYRRDVPSVAYPAPSH 191 >gi|40850587|gb|AAR96017.1| M2.BsaI [Geobacillus stearothermophilus] Length = 381 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPL---GIKPRLGDILEEHIDDKSTISN 55 + + D+GVPQRR R+ II + + P P+ + L D L I K +S+ Sbjct: 278 LNSVDYGVPQRRNRVVIIGDSTGTKNSEPPIPITSLKGEKTLFDALSSAISVKEALSD 335 >gi|89513784|gb|ABD74727.1| site-specific DNA-methyltransferase [Ensifer adhaerens] Length = 137 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLG 34 + A FGVPQ RERL+I+ + + +FP P Sbjct: 71 LNAAYFGVPQVRERLFIVALADALDQVPEFPDPTH 105 >gi|119509253|ref|ZP_01628403.1| DNA-cytosine methyltransferase family protein [Nodularia spumigena CCY9414] gi|119466095|gb|EAW46982.1| DNA-cytosine methyltransferase family protein [Nodularia spumigena CCY9414] Length = 418 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 31/100 (31%), Gaps = 3/100 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID--DKSTISNKLW 58 M A + +PQ R RL++ + +F FP E ++ + Sbjct: 238 MNAASYSIPQNRNRLFVFGHRTAN-QFVFPEANLNIVPCYKAFEHPVNNLENHITRQHKA 296 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 E + E N G + T+ + K G Sbjct: 297 ESIIRYMELNYGRRDKLGRVDRLNPDLPSKTVISGGTKGG 336 >gi|283549178|ref|NP_001164522.1| DNA methyltransferase 1a [Apis mellifera] Length = 1366 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 29/58 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 ++A ++G+PQ R R+ I+ + K+P P + + L +D+K SN W Sbjct: 1055 LQAGNYGIPQTRRRMIILAAAPGQMLPKYPEPSHVFSKRACQLSVLVDNKKYSSNCNW 1112 >gi|254409526|ref|ZP_05023307.1| DNA-cytosine methyltransferase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196183523|gb|EDX78506.1| DNA-cytosine methyltransferase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 437 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 19/78 (24%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF------PT-------------PLGIKPRLGD 41 + + FG+PQ R RLY++ L S +F+ P PL + D Sbjct: 148 LNSAHFGLPQNRVRLYMVGILGASPKFELISDLGPPDSHSYNCQQLSLFNPLTQPVAVAD 207 Query: 42 ILEEHIDDKSTISNKLWE 59 ILE++ D K S + E Sbjct: 208 ILEDNPDSKYDCSPEFVE 225 >gi|294788934|ref|ZP_06754174.1| modification methylase HphIA [Simonsiella muelleri ATCC 29453] gi|294483036|gb|EFG30723.1| modification methylase HphIA [Simonsiella muelleri ATCC 29453] Length = 328 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 11/107 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR--------LGDILEEHIDDKST 52 + A DFGVPQ+R R+ I + + FP + + +L + Sbjct: 153 LNAVDFGVPQQRSRIVFIG-RRDNGKILFPKSVQATCKTVGETIGHFPPLLSGETHEHIA 211 Query: 53 ISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA--RYYKD 97 + Q ++ + I G + T + RY++D Sbjct: 212 NHEAMAHTPQMLEKMSFIQNGGNRNDIPEHLRPKTGDIRKYIRYHRD 258 >gi|322418052|ref|YP_004197275.1| DNA-cytosine methyltransferase [Geobacter sp. M18] gi|320124439|gb|ADW11999.1| DNA-cytosine methyltransferase [Geobacter sp. M18] Length = 385 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 4/59 (6%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 A D+G Q+R R+ I N ++ P P + R +L + + Sbjct: 175 NAADYGAAQKRHRVIIAGIRNDLGIKLNLPAPTHSRER---LLWDQWITGEYWERHRLK 230 >gi|197124335|ref|YP_002136286.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K] gi|196174184|gb|ACG75157.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K] Length = 508 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 1/40 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRL 39 + A +GVPQ RER++ I V P + Sbjct: 177 LNAAMYGVPQLRERIFFIGIRKDLAVRPSVPPSTHLIGTP 216 >gi|217033005|ref|ZP_03438476.1| hypothetical protein HPB128_151g1 [Helicobacter pylori B128] gi|298736554|ref|YP_003729080.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] gi|216945262|gb|EEC23940.1| hypothetical protein HPB128_151g1 [Helicobacter pylori B128] gi|298355744|emb|CBI66616.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] Length = 327 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 32/101 (31%), Gaps = 11/101 (10%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLG--IKPRLGDILEEHIDD------KST 52 A D+GV Q R R++ I F V + FP K L D++ + D K+ Sbjct: 145 NAKDYGVAQERLRVFYIGFRRDLKVNYIFPKGSTHLKKLTLKDVIWDLKDSVVCALAKNK 204 Query: 53 ISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + H+ + T+ A Sbjct: 205 RNPNAINNHEYFIGSYSPIFMS--RNRVKNWDEQAFTIQAS 243 >gi|126659133|ref|ZP_01730272.1| site-specific DNA-methyltransferase M.NgoVII [Cyanothece sp. CCY0110] gi|126619540|gb|EAZ90270.1| site-specific DNA-methyltransferase M.NgoVII [Cyanothece sp. CCY0110] Length = 346 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL 39 D+GVPQ RER+ II + FK+ P Sbjct: 134 NFADYGVPQLRERVLIIGIRKD-INFKYRKPFPTHKPD 170 >gi|33322745|gb|AAQ07107.1|AF496419_1 cytosine-specific DNA methyltransferase [Lactobacillus delbrueckii subsp. lactis] Length = 138 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 14/26 (53%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A +FGVPQ RERL I + Sbjct: 106 LNARNFGVPQNRERLIYIGIRKDIAD 131 >gi|317182001|dbj|BAJ59785.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter pylori F57] Length = 434 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FP 30 + A DFGV Q RERLYI+ L+ ++ FP Sbjct: 175 LNAKDFGVAQNRERLYIVGNLSCPIDLDHFP 205 >gi|13358092|ref|NP_078366.1| cytosine-specific methyltransferase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762087|ref|YP_001752613.1| cytosine-specific methyltransferase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920252|ref|ZP_02931618.1| cytosine-specific methyltransferase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|186701746|ref|ZP_02971433.1| cytosine-specific methyltransferase [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|11356834|pir||D82880 cytosine-specific methyltransferase UU528 [imported] - Ureaplasma urealyticum gi|6899531|gb|AAF30941.1|AE002151_7 cytosine-specific methyltransferase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827664|gb|ACA32926.1| cytosine-specific methyltransferase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902654|gb|EDT48943.1| cytosine-specific methyltransferase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|186701017|gb|EDU19299.1| cytosine-specific methyltransferase [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 299 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 11/102 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---------EFKFPTPLGIKPRLGDILEEHIDDKS 51 + A D+G QRR+R+Y I LN + + P G + +L D+L+ + + Sbjct: 107 LNALDYGSAQRRKRVYAISILNYDGLIDSNGNILDLEAPIFDGKQKQLKDVLKTNYKIEK 166 Query: 52 TISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 Q + ++I Y L N T+T++ R Sbjct: 167 YYQEAYLA--QPNRTFSRIKYVIPKYDLLNPNCYCTSTITTR 206 >gi|260806879|ref|XP_002598311.1| hypothetical protein BRAFLDRAFT_204680 [Branchiostoma floridae] gi|229283583|gb|EEN54323.1| hypothetical protein BRAFLDRAFT_204680 [Branchiostoma floridae] Length = 1275 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 25/65 (38%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++A ++GV Q R R I+ +P P + L +D+K SN W Sbjct: 959 LQAGNYGVAQTRRRAIILAAAPGEKLPMYPEPQHVFSPRACQLSVMVDEKKYNSNTQWRQ 1018 Query: 61 HQKRK 65 + Sbjct: 1019 SAPYR 1023 >gi|186683285|ref|YP_001866481.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102] gi|186465737|gb|ACC81538.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102] Length = 419 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 28/90 (31%), Gaps = 1/90 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR-LGDILEEHIDDKSTISNKLWE 59 + A D+GVPQ R+R++ + + P + D+L + K + Sbjct: 161 LNASDYGVPQARKRVFFVASKFGEIIPPLHQPQHTVRDAIADLLPVLLLPKQNTQVLSPD 220 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 + L ++ T Sbjct: 221 WVKGEYAKYLEKIFPNLGILTNISTGFAAT 250 >gi|330723584|gb|AEC45954.1| Cytosine-specific methyltransferase [Mycoplasma hyorhinis MCLD] Length = 397 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 35/105 (33%), Gaps = 13/105 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDD----------- 49 + + DFG Q RER++++ LN FK+P + L ILE + Sbjct: 217 LNSTDFGSSQNRERVFMVSKLNNKP-FKWPLKIKHNNDLSRILESNFQPTAQILELTSKI 275 Query: 50 KSTISNKLWEGHQKRKENNKIAGKGFG-YGLFFENSATTNTLSAR 93 K + + F + N TL+A Sbjct: 276 KEKGITEFKTTTNNISKAFIKNWSNFNSENYIYNNKGFGPTLTAS 320 >gi|303324183|ref|XP_003072079.1| C-5 cytosine methyltransferase DmtA, putative [Coccidioides posadasii C735 delta SOWgp] gi|240111789|gb|EER29934.1| C-5 cytosine methyltransferase DmtA, putative [Coccidioides posadasii C735 delta SOWgp] Length = 535 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 5/91 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + D+GVPQ+R+RL +I FP P P + I D + Sbjct: 415 LSCEDYGVPQQRKRLVMIGAGPGEPLPPFPKPTHGPPGSNLLPHRTILDAIGDIPENAPD 474 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 H + + K F + T++ Sbjct: 475 HDPERAYFRNITKP-----AFPPRSFAKTIT 500 >gi|254224899|ref|ZP_04918514.1| Site-specific DNA methylase [Vibrio cholerae V51] gi|125622587|gb|EAZ50906.1| Site-specific DNA methylase [Vibrio cholerae V51] Length = 505 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 2/72 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + ACD+G P R+R +++ N + +P P G I D S + + Sbjct: 196 LSACDYGAPTIRKRFFLVA-RNDNKPINWPEPTHGPKGSGLIPYATAADIIDWSIPV-KS 253 Query: 61 HQKRKENNKIAG 72 R++ Sbjct: 254 IFGREKPLAEKT 265 >gi|320037073|gb|EFW19011.1| hypothetical protein CPSG_04557 [Coccidioides posadasii str. Silveira] Length = 607 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 5/91 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + D+GVPQ+R+RL +I FP P P + I D + Sbjct: 415 LSCEDYGVPQQRKRLVMIGAGPGEPLPPFPKPTHGPPGSNLLPHRTILDAIGDIPENAPD 474 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 H + + K F + T++ Sbjct: 475 HDPERAYFRNITKP-----AFPPRSFAKTIT 500 >gi|18700048|gb|AAL03949.1| DNA methyltransferase Bse634IM [Geobacillus stearothermophilus] Length = 387 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 9/54 (16%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---------FKFPTPLGIKPRLGDILEE 45 + A +FG+PQ R R++II F N +E F++PTP+ + E Sbjct: 172 LNALEFGIPQDRARVFIIGFKNSIIETLQENYMDAFQWPTPIYPDAKTSYNWPE 225 >gi|85710855|ref|ZP_01041916.1| DNA modification methylase M.NGOI [Idiomarina baltica OS145] gi|85695259|gb|EAQ33196.1| DNA modification methylase M.NGOI [Idiomarina baltica OS145] Length = 345 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 1/57 (1%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + FGVPQ R R ++ FK+P P +G+ L + + K W Sbjct: 163 SSQFGVPQLRPRTILVALRPEVASHFKWPQPQSKIVTVGEALGDLMASKRWPKVNDW 219 >gi|315650253|ref|ZP_07903326.1| modification methylase BbvI [Eubacterium saburreum DSM 3986] gi|315487498|gb|EFU77807.1| modification methylase BbvI [Eubacterium saburreum DSM 3986] Length = 349 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Query: 5 DFGVPQRRERLYIIDFLNP-SVEFKFPTP---LGIKPRLGDILEEHIDDKSTISNKLWE 59 D+G+PQ R R+ I+ N SV+F P+P + + +E + +N+ + Sbjct: 159 DYGIPQTRHRIIIVGIRNDISVKFNVPSPAPFTHLNNTCRNAIENPPIPQDAFNNEFTK 217 >gi|304372838|ref|YP_003856047.1| Cytosine-specific methyltransferase [Mycoplasma hyorhinis HUB-1] gi|304309029|gb|ADM21509.1| Cytosine-specific methyltransferase [Mycoplasma hyorhinis HUB-1] Length = 397 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 35/105 (33%), Gaps = 13/105 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDD----------- 49 + + DFG Q RER++++ LN FK+P + L ILE + Sbjct: 217 LNSTDFGSSQNRERVFMVSKLNNKP-FKWPLKIKHNNDLSRILESNFQPTAQILELTSKI 275 Query: 50 KSTISNKLWEGHQKRKENNKIAGKGFG-YGLFFENSATTNTLSAR 93 K + + F + N TL+A Sbjct: 276 KEKGITEFKTTTNNISKAFIKNWSNFNSENYIYNNKGFGPTLTAS 320 >gi|227524411|ref|ZP_03954460.1| possible DNA (cytosine-5-)-methyltransferase [Lactobacillus hilgardii ATCC 8290] gi|227088642|gb|EEI23954.1| possible DNA (cytosine-5-)-methyltransferase [Lactobacillus hilgardii ATCC 8290] Length = 193 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 26/88 (29%), Gaps = 3/88 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTIS--NKLW 58 + +FGVPQ R+RL ++ F + D + K + K+ Sbjct: 4 INVKNFGVPQNRKRLVLLGSKKQQPNFP-DFTTKNIKTVRDCIGNLTPPKKSTDILQKIH 62 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSAT 86 H + E G + Sbjct: 63 SNHTEYIEKIISMIPKNGGSRKDLPESY 90 >gi|156549014|ref|XP_001607336.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase [Nasonia vitripennis] Length = 1682 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 24/61 (39%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQKRK 65 +G PQ R R ++ SV KFP L + P+ L ID K + W + Sbjct: 1384 YGAPQNRRRSVLLGAAPDSVLPKFPERLHVFPKPLCELGIVIDSKKYTQDTFWTESAPYR 1443 Query: 66 E 66 Sbjct: 1444 S 1444 >gi|119173265|ref|XP_001239116.1| hypothetical protein CIMG_10138 [Coccidioides immitis RS] Length = 626 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 5/91 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + D+GVPQ+R+RL +I FP P P + I D + Sbjct: 472 LSCEDYGVPQQRKRLVMIGAGPGEPLPPFPKPTHGPPGSNLLPHRTILDAIGDIPENAPD 531 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 H + + K F + T++ Sbjct: 532 HDLERAYFRNITKP-----AFPPRSFAKTIT 557 >gi|256397638|ref|YP_003119202.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928] gi|256363864|gb|ACU77361.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928] Length = 389 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 + A FGVPQ+RERL ++ V+ ++P P Sbjct: 157 LNAAHFGVPQKRERLILLGAQQG-VKLRWPRPTH 189 >gi|2558956|gb|AAC49849.1| Masc1 [Ascobolus immersus] Length = 537 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 17/41 (41%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGD 41 + A ++GV Q R+RL II FP P D Sbjct: 373 LNAIEYGVCQNRKRLIIIGAAPGEELPPFPLPTHQDFFSKD 413 >gi|57116673|gb|AAW33810.1| M.HinP1I methyltransferase [Haemophilus influenzae] Length = 322 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 3/77 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKL 57 + + +G PQ RER+Y + ++ FP P + L K I+ Sbjct: 145 LDSQFYGTPQMRERIYFVGIRKDIHHSDYVFPEPKSNNGNELSNYLIGDGKYKFLINKTF 204 Query: 58 WEGHQKRKENNKIAGKG 74 + ++I+ Sbjct: 205 ENYINNKYNKDRISLDQ 221 >gi|332674342|gb|AEE71159.1| site-specific DNA-methyltransferase [Helicobacter pylori 83] Length = 418 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 5/56 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + + +G +RERL I+ N F FP P + D + +D K+ ++ Sbjct: 214 LNSAWYGSATKRERLIIVAIRNDLPFHFAFPKPTHL----SDEINTKLDFKNLPTS 265 >gi|217965593|ref|YP_002351271.1| modification methylase (cytosine-specific methyltransferase) [Listeria monocytogenes HCC23] gi|217334863|gb|ACK40657.1| modification methylase (cytosine-specific methyltransferase) [Listeria monocytogenes HCC23] gi|307569856|emb|CAR83035.1| methyltransferase [Listeria monocytogenes L99] Length = 411 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 1/45 (2%) Query: 2 KACDFGVPQRRERLYIIDFLN-PSVEFKFPTPLGIKPRLGDILEE 45 + D+GVPQ RER+++I F++ P +L Sbjct: 226 NSRDYGVPQLRERVFLIGTHETKQPNFEYILPPPTNGTKKGLLPF 270 >gi|51892448|ref|YP_075139.1| site-specific DNA-methyltransferase [Symbiobacterium thermophilum IAM 14863] gi|51856137|dbj|BAD40295.1| site-specific DNA-methyltransferase [Symbiobacterium thermophilum IAM 14863] Length = 486 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKP 37 + A +GVPQ RER+++I VE +FP P Sbjct: 181 LNAVHYGVPQMRERMFLIAVAGELGVEPEFPVPTHAFT 218 >gi|290892537|ref|ZP_06555530.1| site-specific DNA-methyltransferase BsuRI [Listeria monocytogenes FSL J2-071] gi|290557846|gb|EFD91367.1| site-specific DNA-methyltransferase BsuRI [Listeria monocytogenes FSL J2-071] Length = 409 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 1/45 (2%) Query: 2 KACDFGVPQRRERLYIIDFLN-PSVEFKFPTPLGIKPRLGDILEE 45 + D+GVPQ RER+++I F++ P +L Sbjct: 226 NSRDYGVPQLRERVFLIGTHETKQPNFEYILPPPTNGTKKGLLPF 270 >gi|331677320|ref|ZP_08377999.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H591] gi|331075055|gb|EGI46371.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H591] Length = 415 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 34/91 (37%), Gaps = 17/91 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFP-----------TPLG------IKPRLGDIL 43 + +FGVPQ R R+YII L V P P + ++ DIL Sbjct: 146 LNTSNFGVPQNRVRIYIIASLEKEVTLTIPNDLGAKDTHNYKPSKGGHDFYTESKVSDIL 205 Query: 44 EEHIDDKSTISNKLWEGHQKRKENNKIAGKG 74 E+ D+ S+ + + E + G Sbjct: 206 EDSPDESYDCSDWFKQRLEDIFEGDLNKVHG 236 >gi|160931938|ref|ZP_02079330.1| hypothetical protein CLOLEP_00771 [Clostridium leptum DSM 753] gi|156868980|gb|EDO62352.1| hypothetical protein CLOLEP_00771 [Clostridium leptum DSM 753] Length = 379 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 1/85 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DFGVPQ R+R+Y+I +L+ K FP L I ++ + Sbjct: 150 LNSKDFGVPQSRKRVYLIGYLDKRCRGKIFPFTETAGTPLIQIRPGAQGERVYSPEGVSC 209 Query: 60 GHQKRKENNKIAGKGFGYGLFFENS 84 + + GL + + Sbjct: 210 TLTAQPGGFGGKTGLYEVGLPIKEN 234 >gi|218134945|ref|ZP_03463749.1| hypothetical protein BACPEC_02850 [Bacteroides pectinophilus ATCC 43243] gi|217990330|gb|EEC56341.1| hypothetical protein BACPEC_02850 [Bacteroides pectinophilus ATCC 43243] Length = 416 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP--LGIKPRLGDILEEHIDDKS--TISNK 56 + A DFGV Q R+R+ I+ +L + +++P+ + K + D+L + K Sbjct: 202 LNAQDFGVLQSRKRVIIVGWLKGTG-YEYPSFDVIHSKAEVWDLLNDLPVLKPGEEAIEH 260 Query: 57 LWEGHQKRKENNKIA 71 ++ K+ K Sbjct: 261 TMTDMRRLKKYVKDN 275 >gi|261838825|gb|ACX98591.1| cytosine-methyltransferase [Helicobacter pylori 51] Length = 413 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + + +G +RERL I+ N F FP P + D + +D K ++ Sbjct: 214 LNSAWYGSATKRERLIIVAIRNDLPFHFAFPKPTHL----SDEINTKLDFKDLPTS 265 >gi|109947738|ref|YP_664966.1| site-specific DNA methyltransferase [Helicobacter acinonychis str. Sheeba] gi|109714959|emb|CAJ99967.1| site-specific DNA methyltransferase [Helicobacter acinonychis str. Sheeba] Length = 327 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLG--IKPRLGDILEEHIDD------KST 52 A D+GV Q R R++ I F + + P + L D++ + D K+ Sbjct: 145 NAKDYGVAQERLRVFYIGFRRDLKINYTLPKGSTHLKRLTLKDVIWDLKDSVVCALAKNK 204 Query: 53 ISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + H+ + T+ A Sbjct: 205 HNPNAINNHEYFIGSYSPIFMS--RNRVKNWDEQAFTIQAS 243 >gi|332673536|gb|AEE70353.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 83] Length = 434 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FP 30 + A DFGV Q RERLYI+ L+ +++ FP Sbjct: 175 LNAKDFGVAQNRERLYIVGNLSCTIDLDHFP 205 >gi|153870986|ref|ZP_02000267.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS] gi|152072545|gb|EDN69730.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS] Length = 350 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 + A D+G PQ+R RL+ + N F+FP P Sbjct: 266 LMAADYGTPQKRRRLFFVAA-NDLQGFQFPAPTH 298 >gi|9858807|gb|AAG01143.1|AF283660_1 BsrFI methylase [Geobacillus stearothermophilus] Length = 389 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 9/48 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---------FKFPTPLGIKPRL 39 + A +FG+PQ R R++++ F +E F++PTP + Sbjct: 174 LNALEFGIPQDRTRVFVVGFKKSIIEALQENNMDIFQWPTPTYPDAKN 221 >gi|315638243|ref|ZP_07893425.1| site-specific DNA-methyltransferase [Campylobacter upsaliensis JV21] gi|315481779|gb|EFU72401.1| site-specific DNA-methyltransferase [Campylobacter upsaliensis JV21] Length = 418 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 36/103 (34%), Gaps = 4/103 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A +G +RERL I+ +F +P P +G L+ D+ K + Sbjct: 215 LNAAWYGAATKRERLIIVATRADLQGDFHYPLPRFYDESIGTKLDFSDDE--LAKCKFKK 272 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSA-RYYKDGSEI 101 R+ KI T+ RY K+G I Sbjct: 273 PLTLREVLAKIDYTNENDIDNLPMQHNAKTIERFRYIKEGCNI 315 >gi|307149806|ref|YP_003890849.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] gi|306986606|gb|ADN18484.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] Length = 645 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 36/112 (32%), Gaps = 13/112 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLN-PSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A DFGVPQ R+R +++ N +E P L I + +ST++ W+ Sbjct: 164 LDAADFGVPQCRKRFFLVATNNLIPLELTLPKKLSITWFEATVDLIDDLPESTLAAWQWQ 223 Query: 60 GHQKRKENNKIAGKGFGYGL------------FFENSATTNTLSARYYKDGS 99 Y + + T+ A DG Sbjct: 224 RLPFDVVQEFKNEADTAYLIERSGARNDRPLHLRTANQPAWTIKAGLGSDGK 275 >gi|313667096|gb|ADR72993.1| M1.BspMI [Bacillus sp. M(2010)] Length = 348 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 + D+GVPQ RER+ II E FP + G++ Sbjct: 158 LNMADYGVPQIRERVIIIGNRLGE-EIDFPEKDYSELPTGNL 198 >gi|193071751|ref|ZP_03052649.1| DNA-cytosine methyltransferase [Escherichia coli E110019] gi|192954951|gb|EDV85456.1| DNA-cytosine methyltransferase [Escherichia coli E110019] Length = 374 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 7/61 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE------FKFPTPLGIKPRLGDILEEHIDDKSTIS 54 + D+GVPQ R+R I + F P P P L E + + I Sbjct: 152 LNTADYGVPQTRKRTIAIGIKRELFDVHSIPAFP-PAPTHRSPDKDVALPEWVCTRDAIG 210 Query: 55 N 55 + Sbjct: 211 D 211 >gi|210610975|ref|ZP_03288684.1| hypothetical protein CLONEX_00874 [Clostridium nexile DSM 1787] gi|210152200|gb|EEA83207.1| hypothetical protein CLONEX_00874 [Clostridium nexile DSM 1787] Length = 423 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP--LGIKPRLGDILEEHIDDKS--TISNK 56 + A DFGV Q R+R+ I+ +L + +++P+ + K + D+L + K Sbjct: 202 LNAQDFGVLQSRKRVIIVGWLKGTG-YEYPSFDVIHSKAEVWDLLNDLPVLKPGEEAIEH 260 Query: 57 LWEGHQKRKENNKIA 71 ++ K+ K Sbjct: 261 TMTDMRRLKKYVKDN 275 >gi|160933407|ref|ZP_02080795.1| hypothetical protein CLOLEP_02253 [Clostridium leptum DSM 753] gi|156867284|gb|EDO60656.1| hypothetical protein CLOLEP_02253 [Clostridium leptum DSM 753] Length = 382 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 16/117 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DFGVPQ R+R+Y++ +L+ K P L I ++ + + Sbjct: 149 LNSKDFGVPQSRKRVYLVGYLDERCRGKILPFTETAGTPLKQIRSGAQGERIYSTEGVSC 208 Query: 60 GHQKRKENNKIA------------GKGFGYGLFFENSATT---NTLSARYYKDGSEI 101 + GY + + + TL+ R + G +I Sbjct: 209 TLTSQAGGMGGKTGLYCTGVPIKENTKKGYKMAYPGDSVDLAYPTLNTRRGRVGRKI 265 >gi|296425866|ref|XP_002842459.1| hypothetical protein [Tuber melanosporum Mel28] gi|295638727|emb|CAZ86650.1| unnamed protein product [Tuber melanosporum] Length = 857 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 32/97 (32%), Gaps = 7/97 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + ++GVPQ R+RL+++ +FP P P+ +I + G Sbjct: 666 LHGVEYGVPQTRKRLFLLAASPGEELPEFPKPTHAHPKTANIEGRAPPRTVRDA---ISG 722 Query: 61 HQKRKENNKIAGKGF----GYGLFFENSATTNTLSAR 93 ++ F + +T+ A Sbjct: 723 IPATATSHVHNFSPFLDGPRLSTVNLDLPLMSTILAS 759 >gi|170718749|ref|YP_001783936.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] gi|168826878|gb|ACA32249.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] Length = 372 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGI 35 +FGVPQ RER+ I+ + F+ P P Sbjct: 159 NFAEFGVPQFRERVLIVGVRLDTGFNFQHPMPTHN 193 >gi|317506240|ref|ZP_07964059.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC BAA-974] gi|316255486|gb|EFV14737.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC BAA-974] Length = 347 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 29/93 (31%), Gaps = 10/93 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A FGVPQ R+R +I VE +P + ++ H D + SN Sbjct: 149 LDASYFGVPQSRKRAVLIASRLGKVELPWP----GEVTPMSVVFAHSDGRVQRSN----- 199 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + T++ R Sbjct: 200 -YSGSGPVGARTAQERGRTMRGLDQPSVTITRR 231 >gi|145641419|ref|ZP_01796998.1| cytosine specific DNA methyltransferase (BSP6IM) [Haemophilus influenzae R3021] gi|145273962|gb|EDK13829.1| cytosine specific DNA methyltransferase (BSP6IM) [Haemophilus influenzae 22.4-21] Length = 298 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 3/77 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKL 57 + + +G PQ RER+Y + ++ FP P + L K I+ Sbjct: 121 LDSQFYGTPQMRERIYFVGIRKDIHHSDYIFPEPKSNNGNELSNYLIGDGKYKFLINKTF 180 Query: 58 WEGHQKRKENNKIAGKG 74 + ++I+ Sbjct: 181 ENYINNKYNKDRISLDQ 197 >gi|303237411|ref|ZP_07323977.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN] gi|302482361|gb|EFL45390.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN] Length = 383 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 3/87 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 ++A + VPQ+RER+ ++ N V F +P P L D ++ + + + Sbjct: 188 LEAIRYQVPQKRERIVLVAIRNDIAPKVTFHWPAPYYRLMTLNDAFKKGELYPTDVPKSI 247 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENS 84 + ++KE G + Sbjct: 248 GAKYPEKKERVLRLVPQGGDWRNLPDD 274 >gi|213964765|ref|ZP_03392965.1| modification methylase NaeI [Corynebacterium amycolatum SK46] gi|213952958|gb|EEB64340.1| modification methylase NaeI [Corynebacterium amycolatum SK46] Length = 333 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A + GVPQ R R ++ F +P P G P +G+ L + + + W Sbjct: 153 IYASEHGVPQLRPRFVLVAVKQEYAPFFHWPEPQGEAPTVGETLYAEMASQGWPGAESWA 212 >gi|170084587|ref|XP_001873517.1| predicted protein [Laccaria bicolor S238N-H82] gi|164651069|gb|EDR15309.1| predicted protein [Laccaria bicolor S238N-H82] Length = 1273 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 28/79 (35%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++A +G PQRRER ++I L+ + P P P+ T + Sbjct: 930 LQAAHYGTPQRRERFFLIAALDGTPLPALPQPTHDFPKEFFKNTNSDVTYKTTPSTSLSI 989 Query: 61 HQKRKENNKIAGKGFGYGL 79 K+ + G L Sbjct: 990 VYPNKKRIQPIRSANGTAL 1008 >gi|291007577|ref|ZP_06565550.1| DNA-cytosine methyltransferase [Saccharopolyspora erythraea NRRL 2338] Length = 418 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 7/41 (17%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-------EFKFPTPLG 34 + A D+GVPQ R R I+ + ++P P Sbjct: 173 LNAADYGVPQARRRAIILATRRDLISEHPERVGVQYPEPTH 213 >gi|239927639|ref|ZP_04684592.1| DNA methylase [Streptomyces ghanaensis ATCC 14672] gi|291435979|ref|ZP_06575369.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291338874|gb|EFE65830.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 387 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 + A D+GVPQ R+R +I V P P K D+ Sbjct: 162 LNAADYGVPQTRQRAILIASRTRKV--TAPDPTHAKAPEWDLF 202 >gi|228969065|ref|ZP_04129983.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar sotto str. T04001] gi|228790631|gb|EEM38314.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar sotto str. T04001] Length = 326 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 10/20 (50%), Positives = 15/20 (75%) Query: 1 MKACDFGVPQRRERLYIIDF 20 + + +FGVPQ RER++II Sbjct: 150 LNSKNFGVPQNRERVFIIGH 169 >gi|300866085|ref|ZP_07110814.1| site-specific DNA-methyltransferase [Oscillatoria sp. PCC 6506] gi|300335911|emb|CBN55972.1| site-specific DNA-methyltransferase [Oscillatoria sp. PCC 6506] Length = 436 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 3/51 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT---PLGIKPRLGDILEEHID 48 + A +GVPQ+RERL+++ +P + L + + Sbjct: 161 LNAAQYGVPQKRERLFLLGCRQDLTLPTYPQAFTHPASRKTSHSELPDSPN 211 >gi|238790792|ref|ZP_04634550.1| site-specific DNA methylase [Yersinia frederiksenii ATCC 33641] gi|238721107|gb|EEQ12789.1| site-specific DNA methylase [Yersinia frederiksenii ATCC 33641] Length = 712 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 2/73 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 +KACD+G P R+RL+++ +P P P D+L + + + + Sbjct: 242 LKACDYGTPTIRKRLFVVG-RCDGESVVWPEPSHGAPNSADVLSGMLQP-WRTAAECIDW 299 Query: 61 HQKRKENNKIAGK 73 Q + Sbjct: 300 SQPTRSIFGRKKD 312 >gi|228936963|ref|ZP_04099705.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228822678|gb|EEM68568.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 326 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 28/95 (29%), Gaps = 3/95 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE- 59 + A FGVP RER++ I L F F R E+ D + L Sbjct: 148 LDARKFGVPHARERVFCISLLGGKA-FDFNKLRFKPMRDIKEYMEYGPDDEIPTQYLINI 206 Query: 60 -GHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + G T++ R Sbjct: 207 PSMLNKIKEFNPNPTGSYKRQLDVIDQYCYTITER 241 >gi|325965496|ref|YP_004243400.1| DNA-methyltransferase Dcm [Arthrobacter phenanthrenivorans Sphe3] gi|323471583|gb|ADX75266.1| DNA-methyltransferase Dcm [Arthrobacter phenanthrenivorans Sphe3] Length = 389 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 12/102 (11%) Query: 5 DFGVPQRRERLYIIDFLNPS-VEFKFPTPL---------GIKPRLGDILEEHIDDKSTIS 54 ++GVPQRR+R+ I+ +F+ P+P + I + + Sbjct: 183 EYGVPQRRQRIVIVGIREDLQTDFRVPSPEIYNDIDVSAKSALTVPPIPLSAPNHQFVRP 242 Query: 55 NKLWEGHQKRKENNKIAGKGFGYG-LFFENSATTN-TLSARY 94 + + A + T T+S Y Sbjct: 243 SATVAERLSYLLPGEHAFSPRALQEMPERLHIKTRTTISTTY 284 >gi|209525887|ref|ZP_03274422.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209493696|gb|EDZ94016.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 406 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDDKS 51 D+GVPQ RER+ I+ + F P+P RL L K Sbjct: 160 NFADYGVPQYRERVLIVGVRMDTGFNFIHPSPEYGSDRLYPYLTAKQALKD 210 >gi|168206039|ref|ZP_02632044.1| Dcm [Clostridium perfringens E str. JGS1987] gi|170662518|gb|EDT15201.1| Dcm [Clostridium perfringens E str. JGS1987] Length = 339 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 2/58 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + ++ RER++I+ F+F L I E +D+K + Sbjct: 148 LSGINYNSAHSRERVFIVSIRKDIDNGSFEFKEGNNNLVTLESITESFVDEKYYCKDN 205 >gi|67924379|ref|ZP_00517809.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] gi|67853772|gb|EAM49101.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] Length = 435 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI-LEEHIDDKSTISN 55 + + ++GVPQ RERL+++ +P+ + + D L K I + Sbjct: 157 LNSANYGVPQLRERLFLLGSKKGLNLPNYPSFITDYTHINDSNLPSTPTVKEAIQD 212 >gi|119483468|ref|ZP_01618882.1| site-specific DNA-methyltransferase [Lyngbya sp. PCC 8106] gi|119458235|gb|EAW39357.1| site-specific DNA-methyltransferase [Lyngbya sp. PCC 8106] Length = 407 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 + A D+G+PQ R RL+I+ + FP + Sbjct: 157 LNATDYGIPQNRRRLFIVAS-KVKITHPFPPSTHTIASQSQL 197 >gi|329767774|ref|ZP_08259290.1| hypothetical protein HMPREF0428_00987 [Gemella haemolysans M341] gi|328838875|gb|EGF88469.1| hypothetical protein HMPREF0428_00987 [Gemella haemolysans M341] Length = 336 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 11/104 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV----EFKFPTPLGIKPR-----LGDILEEHIDDKS 51 + A GVPQ+RER++ I + F G+ ++ + Sbjct: 174 LNASTMGVPQKRERVFFICRRKDLNLPELQLNFNEKPIKFKEVREKGKGEEVKGVAGELL 233 Query: 52 TISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTL-SARY 94 + K +K + G F LF + + NT+ ++ Y Sbjct: 234 AYAKKGETNLEKACIRLRGKGSFFNTVLFSDENVP-NTILTSGY 276 >gi|127487|sp|P09795|MTS1_SALIN RecName: Full=Modification methylase SinI; Short=M.SinI; AltName: Full=Cytosine-specific methyltransferase SinI gi|79032|pir||A32008 site-specific DNA-methyltransferase (cytosine-specific) (EC 2.1.1.73) - Salmonella sp gi|154350|gb|AAA27212.1| modification methylase (M.SinI) [Salmonella enterica subsp. enterica serovar Infantis] Length = 461 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 13/79 (16%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI------------LEEHIDD 49 + +FGVPQ RER+ II + S F P + + L+ + Sbjct: 247 NSANFGVPQIRERVIIICSRDGS-RVPFLQPTHSEKGEYGLPKWITLRETITNLKNITHE 305 Query: 50 KSTISNKLWEGHQKRKENN 68 K + ++ KE Sbjct: 306 HVLFPEKRLKYYRLLKEGQ 324 >gi|319778406|ref|YP_004129319.1| DNA (cytosine-5-)-methyltransferase [Taylorella equigenitalis MCE9] gi|317108430|gb|ADU91176.1| DNA (cytosine-5-)-methyltransferase [Taylorella equigenitalis MCE9] Length = 160 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 10/20 (50%), Positives = 16/20 (80%) Query: 1 MKACDFGVPQRRERLYIIDF 20 + + +FGVPQ R+R+YI+ F Sbjct: 141 LNSKNFGVPQNRKRIYIVAF 160 >gi|86142380|ref|ZP_01060890.1| putative 5-methylcytosine methyltransferase [Leeuwenhoekiella blandensis MED217] gi|85831132|gb|EAQ49589.1| putative 5-methylcytosine methyltransferase [Leeuwenhoekiella blandensis MED217] Length = 332 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 24/57 (42%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + + D+GVPQ R+R+ I N + + + L + KS +K+ Sbjct: 155 LNSADYGVPQVRKRVIFIGTKNSQKILFPKKEVDKYVTVKEALSSYPKLKSGQESKI 211 >gi|241661827|ref|YP_002980187.1| DNA-cytosine methyltransferase [Ralstonia pickettii 12D] gi|240863854|gb|ACS61515.1| DNA-cytosine methyltransferase [Ralstonia pickettii 12D] Length = 398 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK---FPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A ++GVPQRR R++++ N ++F +P P + E K + K+ Sbjct: 199 LDARNYGVPQRRVRVFVLGVRND-IDFDSSVWP-PAPSHGDAREREENPALKKWVSAAKV 256 Query: 58 WEG 60 + Sbjct: 257 FST 259 >gi|255530844|ref|YP_003091216.1| DNA-cytosine methyltransferase [Pedobacter heparinus DSM 2366] gi|255343828|gb|ACU03154.1| DNA-cytosine methyltransferase [Pedobacter heparinus DSM 2366] Length = 350 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 32/104 (30%), Gaps = 19/104 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV----------EFKFPTPL--GIKPRLGDILEEHID 48 + FG+PQRR R++ + F + DIL + D Sbjct: 156 LDTQSFGLPQRRSRIFFVCSKKELEIELTEEAIVRNFNNIDHHGLHTYSNVLDILGKDAD 215 Query: 49 DKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 K +S K+ K G + + TL+A Sbjct: 216 QKYYLSEKI-------KHTILDGGSKNFWSKSQIDLDIARTLTA 252 >gi|168211060|ref|ZP_02636685.1| Dcm [Clostridium perfringens B str. ATCC 3626] gi|170710923|gb|EDT23105.1| Dcm [Clostridium perfringens B str. ATCC 3626] Length = 339 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 2/58 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + ++ RER++I+ F+F L I E +D+K + Sbjct: 148 LSGINYNSAHSRERVFIVSIRKDIDNGSFEFKKGNNNLVTLESITESFVDEKYYCKDN 205 >gi|86475982|dbj|BAE79156.1| putative cytosine methyltransferase [Clostridium perfringens] Length = 339 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 2/58 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + ++ RER++I+ F+F L I E +D+K + Sbjct: 148 LSGINYNSAHSRERVFIVSIRKDIDNGSFEFKKGNNNLVTLESITESFVDEKYYCKDN 205 >gi|77465763|ref|YP_355266.1| cytosine-specific DNA methylase [Rhodobacter sphaeroides 2.4.1] gi|77390181|gb|ABA81365.1| Cytosine-specific DNA methylase [Rhodobacter sphaeroides 2.4.1] Length = 443 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 3/41 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGD 41 + A D+G PQ R+RL++I P + D Sbjct: 154 LDAADYGTPQHRQRLFLIGAKRGE---TLPEIPPPQTNAAD 191 >gi|168206682|ref|ZP_02632687.1| Dcm [Clostridium perfringens E str. JGS1987] gi|190015777|ref|YP_001967782.1| probable site-specific DNA-methyltransferase [Clostridium perfringens] gi|86450199|gb|ABC96308.1| probable site-specific DNA-methyltransferase [Clostridium perfringens] gi|170661882|gb|EDT14565.1| Dcm [Clostridium perfringens E str. JGS1987] Length = 339 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 2/58 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + ++ RER++I+ F+F L I E +D+K + Sbjct: 148 LSGINYNSAHSRERVFIVSIRKDIDNGSFEFKEGNNNLVTLESITESFVDEKYYCKDN 205 >gi|328947611|ref|YP_004364948.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] gi|328447935|gb|AEB13651.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] Length = 391 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 31/89 (34%), Gaps = 2/89 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPL-GIKPRLGDILEEHIDDKSTISNKLWE 59 + A DFGVPQ R+R +I+ NP+ E PTP + D + + + E Sbjct: 158 LCATDFGVPQTRKRFFILASKNPTTELSAPTPTCKKTVTVQDAFAGLKNVIPNSNQEETE 217 Query: 60 GHQKRKENNKIAGKGFGYGLFFE-NSATT 87 K+ + T Sbjct: 218 YSNSSSMFEKLMRDDDFWRRTNPQPDKVT 246 >gi|293363234|ref|ZP_06610118.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma alligatoris A21JP2] gi|292553093|gb|EFF41842.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma alligatoris A21JP2] Length = 428 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDD-KSTISNKLWE 59 + + DFG+ Q R+R+YII + +V + + + DI E++++ KS S +L + Sbjct: 160 LNSADFGLAQNRKRVYIIGTKDKTVHLN--NFVKKQSNVKDIQEDNLETIKSIFSKQLLK 217 Query: 60 GHQKRKENNKIAGKGFGY 77 ++ + K G Sbjct: 218 KYKTKDIYGKSITDKRGG 235 >gi|228989002|ref|ZP_04149032.1| DNA-cytosine methyltransferase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228770724|gb|EEM19259.1| DNA-cytosine methyltransferase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 445 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 32/70 (45%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 M+A D+GVPQ RER+ +I + F L LG++L++ + + K + Sbjct: 165 MQAHDYGVPQLRERVIVIGTKSNINPFSVIPKLDGPRTLGEVLKDCPESEFFSFKKEYAH 224 Query: 61 HQKRKENNKI 70 + + + Sbjct: 225 VMRLIKPGQC 234 >gi|166366204|ref|YP_001658477.1| DNA cytosine methylase [Microcystis aeruginosa NIES-843] gi|166088577|dbj|BAG03285.1| DNA cytosine methylase [Microcystis aeruginosa NIES-843] Length = 346 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 26/79 (32%), Gaps = 3/79 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + + F +PQ R R +++ F F+FP + + I+ D IS K Sbjct: 159 IDSKYFQIPQSRPRFFLLAFRKDLGIKNFQFPQHCHAEVGIEKIIVPG-DYSIPISGKWQ 217 Query: 59 EGHQKRKENNKIAGKGFGY 77 + F Sbjct: 218 QYIDYYAGRINAEQLSFQM 236 >gi|323650451|gb|ADX97303.1| M.FseI [Frankia sp. Eul1b] Length = 374 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 2/37 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 + A DFGVPQRR+R +I P KP Sbjct: 162 LNAADFGVPQRRQRTIMIGSRIGPP--SLPRATHQKP 196 >gi|312200922|ref|YP_004020983.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c] gi|311232258|gb|ADP85113.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c] Length = 384 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 2/37 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 + A DFGVPQRR+R +I P KP Sbjct: 172 LNAADFGVPQRRQRTIMIGSRIGPP--SLPRATHQKP 206 >gi|332655061|ref|ZP_08420802.1| modification methylase NgoFVII (Cytosine-specificmethyltransferase NgoFVII) (M.NgoFVII) (M.NgoVII) [Ruminococcaceae bacterium D16] gi|332515921|gb|EGJ45530.1| modification methylase NgoFVII (Cytosine-specificmethyltransferase NgoFVII) (M.NgoFVII) (M.NgoVII) [Ruminococcaceae bacterium D16] Length = 369 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 9/65 (13%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLG------IKPRLGDILEEHIDDKSTIS 54 ++GVPQ RER+ + + F P P GD L +K + Sbjct: 158 NFAEYGVPQFRERVLFVGVRIDTGFNFVHPKPTHGPNGELPYVTAGDALVGV--EKVPTN 215 Query: 55 NKLWE 59 N+L Sbjct: 216 NELIN 220 >gi|315169253|gb|EFU13270.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX1341] Length = 521 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 23/60 (38%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A FGVPQ+R R+ + + N V +P + + D + + + Sbjct: 182 LNAAHFGVPQQRNRVVFLAYRNDVVPVTYPVINNDRTTVYDAFGSLYPNTDFQYDTQYSF 241 >gi|308229522|gb|ADO24174.1| M.AclI [Acinetobacter calcoaceticus] Length = 458 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGD 41 A D+GVPQ R R++ + N E FP G GD Sbjct: 273 NAKDYGVPQSRARVFFLAIRNDIQSELGFPDAEGNNLTFGD 313 >gi|119513472|ref|ZP_01632497.1| cytosine-specific DNA methyltransferase [Nodularia spumigena CCY9414] gi|119461873|gb|EAW42885.1| cytosine-specific DNA methyltransferase [Nodularia spumigena CCY9414] Length = 400 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 17/26 (65%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A ++GVPQ RER+ ++ F N + Sbjct: 172 INAIEYGVPQDRERIILVGFRNNLIN 197 >gi|323691274|ref|ZP_08105549.1| cytosine-specific methyltransferase [Clostridium symbiosum WAL-14673] gi|323504614|gb|EGB20401.1| cytosine-specific methyltransferase [Clostridium symbiosum WAL-14673] Length = 324 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 12/94 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + A +FG+PQ RER++ + LN +F+F + R + LE+ + D ++ Sbjct: 164 LDAREFGLPQARERVFTVSVLNGE-KFEFDDLIRTPMRNLQEFLEDDVPDIYDVTQP--- 219 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + G T++ R Sbjct: 220 -------SVLACIGEKGIRRATVIKDCAYTITTR 246 >gi|312890850|ref|ZP_07750379.1| DNA-cytosine methyltransferase [Mucilaginibacter paludis DSM 18603] gi|311296633|gb|EFQ73773.1| DNA-cytosine methyltransferase [Mucilaginibacter paludis DSM 18603] Length = 336 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIK-PRLGDILEEHI 47 + + D+GV Q R R ++ + F +P + P +G +L E I Sbjct: 155 INSSDYGVSQLRPRAILVALKKEYFDLFTWPEKNQLFVPSVGQLLFEEI 203 >gi|323186482|gb|EFZ71828.1| DNA adenine methylase family protein [Escherichia coli 1357] Length = 754 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 16/112 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-----FKF--------PTPLGIKPRLGDILEEHI 47 + A FGV QRR R++++ ++ F+F P+ + Sbjct: 198 LDAQYFGVAQRRRRVFVVASARTDLDPATVLFEFEGVRRNIAPSRKKKEIASAITANGAA 257 Query: 48 DDKSTISNKLWEGHQKRKENNKIAGKGFGYGLF--FENSATTNTLSARYYKD 97 +++ L G ++ K GF F + + T +T+ AR +KD Sbjct: 258 ISGESLNPCLHAGMSPGMKSTKA-VNGFRMAAFGEYIDDETASTVKARDFKD 308 >gi|291543286|emb|CBL16395.1| DNA-methyltransferase (dcm) [Ruminococcus sp. 18P13] Length = 369 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 3/96 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + FGVPQ+R RLYI+ +L+P FP G L ++ + ++ + Sbjct: 147 LNSKYFGVPQQRRRLYIVGYLDPRCAGKVFPLSGGNAKNLKQLIPGPQGQRVYETDGIAC 206 Query: 60 GHQKRKENNKIAGKGFGYGLFFEN--SATTNTLSAR 93 + + + + ++AR Sbjct: 207 TQCAGSGGWGGKTGLYFIDMNADPVITDVARCITAR 242 >gi|189459597|ref|ZP_03008382.1| hypothetical protein BACCOP_00223 [Bacteroides coprocola DSM 17136] gi|189433679|gb|EDV02664.1| hypothetical protein BACCOP_00223 [Bacteroides coprocola DSM 17136] Length = 387 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 + A +FGVPQRR+R++II L P P + Sbjct: 290 LNAEEFGVPQRRKRVFIIGSLEEI---SIPQPSPLFY 323 >gi|116750223|ref|YP_846910.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB] gi|116699287|gb|ABK18475.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB] Length = 399 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 21/54 (38%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTIS 54 + A D+GVPQ R R +II L + FP P + + + Sbjct: 163 LCAADYGVPQIRWRAFIIGCLFTDPKKVFPPKRTNYPTDLNNRRIFAEKEVPYI 216 >gi|46019827|emb|CAE52349.1| putative cytosine-specific methyltransferase [Streptococcus thermophilus] Length = 408 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 7/92 (7%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQK 63 DFGVPQ+R+R+ II + + L L L H K T+ + + + Sbjct: 188 SDFGVPQKRKRVIIIGVRRDNQSTDYQEILNQIYSLIHNLSTHQQTK-TVRDAISDLPPL 246 Query: 64 RKENNKIAGKGFGYGLFFENSATTNTLSARYY 95 N K + N ++ N S+R++ Sbjct: 247 YPVENPTRTKAYT------NDSSINGHSSRFH 272 >gi|329121769|ref|ZP_08250386.1| DNA (cytosine-5-)-methyltransferase [Dialister micraerophilus DSM 19965] gi|327468239|gb|EGF13725.1| DNA (cytosine-5-)-methyltransferase [Dialister micraerophilus DSM 19965] Length = 416 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 2/77 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK--FPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A D+G PQRR R +I F N + F F + + ++ + +T+SN+L Sbjct: 162 INAADYGYPQRRRRTFIFAFRNETKFFDYVFNISREDIDEIEEFIKTMVPFSNTMSNELV 221 Query: 59 EGHQKRKENNKIAGKGF 75 G + N + + F Sbjct: 222 AGIENVDLNLAESLEEF 238 >gi|317127844|ref|YP_004094126.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] gi|315472792|gb|ADU29395.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] Length = 360 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 27/87 (31%), Gaps = 1/87 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR-LGDILEEHIDDKSTISNKLWE 59 + A +FGVPQ+R R + I + F + D L E + + + Sbjct: 153 LDASEFGVPQKRLRAFFIATRKDIPQITFDKLKKKPIVLVKDALGELYELEEQMGKNRSN 212 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSAT 86 K ++ EN Sbjct: 213 YFLSSKPDSSYRKYLRNSKNSIENHEI 239 >gi|318057151|ref|ZP_07975874.1| DNA-cytosine methyltransferase [Streptomyces sp. SA3_actG] gi|318076183|ref|ZP_07983515.1| DNA-cytosine methyltransferase [Streptomyces sp. SA3_actF] Length = 386 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 1/40 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRL 39 + A D+GVPQ R R +I E + P P + Sbjct: 155 LNAADYGVPQARRRAIVIATRRDLGEPLRHPIPTHRRATD 194 >gi|160894869|ref|ZP_02075643.1| hypothetical protein CLOL250_02419 [Clostridium sp. L2-50] gi|156863300|gb|EDO56731.1| hypothetical protein CLOL250_02419 [Clostridium sp. L2-50] Length = 423 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 5/76 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP--LGIKPRLGDILEEHID--DKSTISNK 56 + A +FGV Q R+R+ I+ +L + +++P+ + K + D+L++ Sbjct: 202 LNAQNFGVLQSRKRVIIVGWLKGTG-YEYPSFDVIHSKAEVWDLLKDLPPLTPGIEAREH 260 Query: 57 LWEGHQKRKENNKIAG 72 ++ K+ K G Sbjct: 261 TMNDMRRLKKYVKDNG 276 >gi|226945654|ref|YP_002800727.1| C-5 cytosine-specific DNA methylase [Azotobacter vinelandii DJ] gi|226720581|gb|ACO79752.1| C-5 cytosine-specific DNA methylase [Azotobacter vinelandii DJ] Length = 501 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLG 34 + A +GVPQ RERL+++ V +FP+P Sbjct: 199 LNAAFYGVPQLRERLFLVAVDATLDVIPQFPSPTH 233 >gi|228964036|ref|ZP_04125166.1| hypothetical protein bthur0004_8960 [Bacillus thuringiensis serovar sotto str. T04001] gi|228795688|gb|EEM43165.1| hypothetical protein bthur0004_8960 [Bacillus thuringiensis serovar sotto str. T04001] Length = 478 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 + + DFGVPQ+R+R+ II + +P Sbjct: 181 LNSADFGVPQQRKRVVIIANKHGIEN-TYPKNTH 213 >gi|307825806|ref|ZP_07656022.1| DNA-cytosine methyltransferase [Methylobacter tundripaludum SV96] gi|307733114|gb|EFO03975.1| DNA-cytosine methyltransferase [Methylobacter tundripaludum SV96] Length = 359 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 22/32 (68%), Gaps = 3/32 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK--FP 30 + A D+G+PQRR+R++I+ + +EF +P Sbjct: 161 LDARDYGLPQRRKRVFILGIRSD-IEFNSVWP 191 >gi|210614083|ref|ZP_03290039.1| hypothetical protein CLONEX_02252 [Clostridium nexile DSM 1787] gi|210150861|gb|EEA81869.1| hypothetical protein CLONEX_02252 [Clostridium nexile DSM 1787] Length = 244 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 18/23 (78%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + + DFGVPQ R+R+Y+I +L+ Sbjct: 140 LNSKDFGVPQSRKRVYLIGYLDE 162 >gi|262283530|ref|ZP_06061296.1| cytosine-specific methyltransferase NlaX [Streptococcus sp. 2_1_36FAA] gi|262261021|gb|EEY79721.1| cytosine-specific methyltransferase NlaX [Streptococcus sp. 2_1_36FAA] Length = 411 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 10/99 (10%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + FGVPQ R+R++++ FP LG R L E + T + Sbjct: 147 LNSSHFGVPQNRQRVFLVGHSRRRGTRPIFP--LGSYNREVAELSEIRTNSLTAQYPGGQ 204 Query: 60 GHQKRKENNKIAGKGFGY-------GLFFENSATTNTLS 91 G+ +K G + G + TL+ Sbjct: 205 GNGSYIIESKPKRVGNIHPSGKGMNGDVYSAEGPAPTLT 243 >gi|257453711|ref|ZP_05618997.1| modification methylase Eco47II [Enhydrobacter aerosaccus SK60] gi|257448894|gb|EEV23851.1| modification methylase Eco47II [Enhydrobacter aerosaccus SK60] Length = 415 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 3/79 (3%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 KA + VPQ+RERL II N V +F P+P + D L+ S + + Sbjct: 227 KAVFYKVPQKRERLIIIGVRNDLVAKAKFVKPSPYYRLLTVKDALQAGELFDSAVPESVG 286 Query: 59 EGHQKRKENNKIAGKGFGY 77 + + KRK GY Sbjct: 287 QAYPKRKAEIMAYVPEGGY 305 >gi|288958310|ref|YP_003448651.1| DNA (cytosine-5-)-methyltransferase [Azospirillum sp. B510] gi|288910618|dbj|BAI72107.1| DNA (cytosine-5-)-methyltransferase [Azospirillum sp. B510] Length = 375 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 + A DFGVPQ+R+R II + P P + Sbjct: 171 LHAADFGVPQKRQRAIIIGSRVGKP--RLPMPTHQQK 205 >gi|295395397|ref|ZP_06805596.1| modification methylase NaeI [Brevibacterium mcbrellneri ATCC 49030] gi|294971719|gb|EFG47595.1| modification methylase NaeI [Brevibacterium mcbrellneri ATCC 49030] Length = 355 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 18/29 (62%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPT 31 + DFGVPQ R R ++ + +F+FP+ Sbjct: 147 SADFGVPQLRPRAVLVALKDGEADFEFPS 175 >gi|242237482|ref|YP_002985663.1| DNA-cytosine methyltransferase [Dickeya dadantii Ech703] gi|242129539|gb|ACS83841.1| DNA-cytosine methyltransferase [Dickeya dadantii Ech703] Length = 465 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 1/68 (1%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 A +FG PQ RER+ II N + TP ++ + + S K + Sbjct: 247 NAANFGTPQIRERVIIICSRNGKTP-PYLTPTHSDDPYFELPHWNTLESSISDLKNHDHL 305 Query: 62 QKRKENNK 69 ++ K Sbjct: 306 NFPEKRLK 313 >gi|261736050|ref|YP_003257392.1| DNA methylase [Streptomyces sp. ZL12] gi|261349173|gb|ACX71105.1| DNA methylase [Streptomyces sp. ZL12] Length = 368 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 + A ++GVPQ RER +I V P P + D+ Sbjct: 170 LNAANYGVPQTRERAVLIASRVRDV--TAPEPTHAEHPADDLF 210 >gi|328708218|ref|XP_003243626.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Acyrthosiphon pisum] Length = 1227 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHI-DDKSTISNKLWE 59 ++A +FGVPQ R RL I+ +P P+ + R L + D+K + K Sbjct: 922 LQAGNFGVPQTRRRLIIMAAAPGEKLPFYPEPINVFNRKSSSLSVQVGDEKFKTNCKYVN 981 Query: 60 G 60 Sbjct: 982 S 982 >gi|220926735|ref|YP_002502037.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060] gi|219951342|gb|ACL61734.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060] Length = 454 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLGIKPRLGDILE 44 + A GVPQ R+RL + + FP PL + + D L Sbjct: 251 LDAQWLGVPQARQRLIFVGVRDDLGLSPAFPKPLPFRYSVRDALP 295 >gi|218848105|ref|YP_002454768.1| DNA-cytosine methyltransferase [Bacillus cereus G9842] gi|218546236|gb|ACK98629.1| DNA-cytosine methyltransferase [Bacillus cereus G9842] Length = 438 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 31/70 (44%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 M+A D+GVPQ RER+ +I + F L LG++L++ + K + Sbjct: 158 MQAHDYGVPQLRERVIVIGTKSNINPFSVIPKLDGPRTLGEVLKDCPKSEFFSFKKEYAH 217 Query: 61 HQKRKENNKI 70 + + K Sbjct: 218 VMQLIKPGKC 227 >gi|86559571|ref|YP_473392.1| C-5 cytosine-specific DNA methylase [Clostridium perfringens CPE str. F4969] gi|168215006|ref|ZP_02640631.1| C-5 cytosine-specific DNA methylase [Clostridium perfringens CPE str. F4969] gi|86475843|dbj|BAE79019.1| C-5 cytosine-specific DNA methylase [Clostridium perfringens] gi|94958361|gb|ABF47322.1| Dcm [Clostridium perfringens] gi|170713579|gb|EDT25761.1| C-5 cytosine-specific DNA methylase [Clostridium perfringens CPE str. F4969] Length = 339 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 2/58 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + ++ RER++I+ FKF L I E +D+K + Sbjct: 148 LSGINYNSAHSRERVFIVSIRKDIDNGSFKFKEGNDNLVTLESITENFVDEKYYCKDN 205 >gi|254416651|ref|ZP_05030402.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196176617|gb|EDX71630.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 428 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 4/52 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP----LGIKPRLGDILEEHID 48 + A +FGVPQ+R+RL+I+ +P P + D + + + Sbjct: 173 LNAVNFGVPQQRQRLFILGNQVGVKPLTYPQPQLQSPSEFCTVRDAIADLPN 224 >gi|289669548|ref|ZP_06490623.1| DNA-cytosine methyltransferase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 330 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 2/44 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILE 44 + A D+GVPQ RER ++ P P K G +L Sbjct: 145 INAADYGVPQIRERCIVMGIKGRDP--CPPLPTHSKNPDGFMLP 186 >gi|296814510|ref|XP_002847592.1| site-specific DNA-methyltransferase HphI [Arthroderma otae CBS 113480] gi|238840617|gb|EEQ30279.1| site-specific DNA-methyltransferase HphI [Arthroderma otae CBS 113480] Length = 586 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 15/33 (45%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 D+GVPQ R+RL II FP P Sbjct: 426 NCKDYGVPQSRKRLVIIAAGPGEELPPFPPPTH 458 >gi|168210881|ref|ZP_02636506.1| Dcm [Clostridium perfringens B str. ATCC 3626] gi|209947599|ref|YP_002291106.1| C-5 cytosine-specific DNA methylase [Clostridium perfringens] gi|170711042|gb|EDT23224.1| Dcm [Clostridium perfringens B str. ATCC 3626] gi|209910390|dbj|BAG75479.1| C-5 cytosine-specific DNA methylase [Clostridium perfringens] Length = 339 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 2/58 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + ++ RER++I+ F+F L I E +D+K + Sbjct: 148 LSGINYNSAHSRERVFIVSIRKDIDNGSFEFKEGNDNLVTLESITESFVDEKYYCKDN 205 >gi|157691446|ref|YP_001485908.1| DNA (cytosine-5-)-methyltransferase [Bacillus pumilus SAFR-032] gi|157680204|gb|ABV61348.1| DNA (cytosine-5-)-methyltransferase [Bacillus pumilus SAFR-032] Length = 548 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 5/51 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKS 51 + + FGVPQ R+R +II + N P+ D K Sbjct: 322 LNSAHFGVPQERKRYFIIGYRNSK-----PSLPKSILSKEDFFNIGHAIKE 367 >gi|308183509|ref|YP_003927636.1| DNA-cytosine methyltransferase [Helicobacter pylori PeCan4] gi|308065694|gb|ADO07586.1| DNA-cytosine methyltransferase [Helicobacter pylori PeCan4] Length = 238 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 13/99 (13%) Query: 1 MKACDFGVPQRRERLYIID----FLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 +K DFGV Q RER+ ++ + FK P + +IL++ Sbjct: 83 LKVSDFGVSQLRERVIMVGVNESYFKEPFNFKILKKSH-APFVYEILKDL--------EN 133 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYY 95 L EG +K T+ A ++ Sbjct: 134 LTEGAMPNHFYSKAKRNKGQGNNAINKDTYAPTMRAEHH 172 >gi|253997214|ref|YP_003049278.1| DNA-cytosine methyltransferase [Methylotenera mobilis JLW8] gi|253983893|gb|ACT48751.1| DNA-cytosine methyltransferase [Methylotenera mobilis JLW8] Length = 358 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Query: 5 DFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRL 39 ++G+PQ R R+ ++ F + +++F P P Sbjct: 168 EYGIPQSRHRIILVGFRSDLNIKFSPPAPTHKDKPN 203 >gi|94958344|gb|ABF47306.1| Dcm [Clostridium perfringens] gi|94958377|gb|ABF47337.1| Dcm [Clostridium perfringens] Length = 339 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 2/58 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + ++ RER++I+ FKF L I E +D+K + Sbjct: 148 LSGINYNSAHSRERVFIVSIRKDIDNGSFKFKEGNDNLVTLESITENFVDEKYYCKDN 205 >gi|67924690|ref|ZP_00518097.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] gi|67853467|gb|EAM48819.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] Length = 420 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 24/98 (24%) Query: 1 MKACDFGVPQRRERLYIID---------------------FLNPSVEFKFPTPLGIKP-- 37 + + +F VPQ R R+YI+ F ++ P+ Sbjct: 146 LNSSNFNVPQNRVRIYIVGKKGSQPNLTIKSDKGAIDSHSFKKNIIQGDLFAPINYPTKP 205 Query: 38 -RLGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKG 74 + DIL++ +++K S + + N G Sbjct: 206 LTVKDILKDIVEEKYFCSQEFTNLLNRAVRGNFNKLHG 243 >gi|15828657|ref|NP_326017.1| CpG DNA methylase (cytosine-specific methyltransferase SSSI) [Mycoplasma pulmonis UAB CTIP] gi|14089599|emb|CAC13359.1| CPG DNA METHYLASE (CYTOSINE-SPECIFIC METHYLTRANSFERASE SSSI) [Mycoplasma pulmonis] Length = 264 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 12/103 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLN---------PSVEFKFPTPLGIKPRLGDILEEHIDDKS 51 + + D+G Q R+R+Y I LN ++ P P + + DIL+ +++ Sbjct: 68 LNSSDYGSVQSRKRVYAISILNYWGKIDQDGNILDIDKPLPTPKRKSIKDILKVDYENEH 127 Query: 52 TISNKLWEGHQKRKENNKIAGKGFGYGL-FFENSATTNTLSAR 93 L Q + ++ + S+ TL+ R Sbjct: 128 HYQEALIS--QPNRTPSRKTIFEKNPKIDINSTSSLIRTLTTR 168 >gi|313144510|ref|ZP_07806703.1| cytosine specific DNA methyltransferase [Helicobacter cinaedi CCUG 18818] gi|313129541|gb|EFR47158.1| cytosine specific DNA methyltransferase [Helicobacter cinaedi CCUG 18818] Length = 323 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 37/90 (41%), Gaps = 2/90 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q RER+Y + +F F + K L + L D+ + ++ ++ Sbjct: 145 LNSLDFALAQARERVYFVGIRKDKKRDFSF-SQRMTKKALKEFLTPKQDNIFSRDSQSYQ 203 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 + EN G+ + ++ +T Sbjct: 204 TFLRFLENKYNKGRFDLTQILDKDFLVLDT 233 >gi|295836816|ref|ZP_06823749.1| modification methylase NaeI [Streptomyces sp. SPB74] gi|295826219|gb|EDY44437.2| modification methylase NaeI [Streptomyces sp. SPB74] Length = 449 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 36/109 (33%), Gaps = 16/109 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS---VEFKFPTPL-GIKPRLGDILEEHIDD------- 49 + + FGVPQ R R ++ F +F++P + D+L E + + Sbjct: 195 LDSNKFGVPQLRPRAILVAFREDIARFEDFRWPVRSAEEAESVFDVLREEMRERYEPYWT 254 Query: 50 KSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 K + G Q + + A L TL K G Sbjct: 255 KRPLGPGSLTGKQAYERWEERASAADARKL-----KVAPTLVGGSRKHG 298 >gi|194335797|ref|YP_002017591.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme BU-1] gi|194308274|gb|ACF42974.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme BU-1] Length = 434 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 21/55 (38%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 + A D+GVPQ R R +I+ + FP P G I++ Sbjct: 178 LCAADYGVPQIRWRAFIVGCKFADPQAVFPPKKTHFPHKGYRQRFVESSIPYIAD 232 >gi|324111159|gb|EGC05144.1| DNA adenine methylase [Escherichia fergusonii B253] Length = 1095 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 16/112 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-----FKF--------PTPLGIKPRLGDILEEHI 47 + A FGV QRR R++++ ++ F+F P+ + I Sbjct: 539 LDAQYFGVAQRRRRVFVVASARTDLDPATVLFEFEGVRRDIAPSRKKKEIASAIIANGAA 598 Query: 48 DDKSTISNKLWEGHQKRKENNKIAGKGFGYGLF--FENSATTNTLSARYYKD 97 +++ L ++ K F F + + T +T+ AR +KD Sbjct: 599 ISGESLNPCLHADMPPGMKSTKA-VNAFRMAAFGEYIDDETASTVKARDFKD 649 >gi|323969240|gb|EGB64542.1| DNA adenine methylase [Escherichia coli TA007] Length = 754 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 16/112 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-----FKF--------PTPLGIKPRLGDILEEHI 47 + A FGV QRR R++++ ++ F+F P+ + I Sbjct: 198 LDAQYFGVAQRRRRVFVVASARTDLDPATVLFEFEGVRRNIAPSRKKKEIASAIIANGAA 257 Query: 48 DDKSTISNKLWEGHQKRKENNKIAGKGFGYGLF--FENSATTNTLSARYYKD 97 +++ L ++ K F F + + T +T+ AR +KD Sbjct: 258 ISGESLNPCLHADMPPGMKSTKA-VNAFRMAAFGEYIDDETASTVKARDFKD 308 >gi|331655761|ref|ZP_08356750.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M718] gi|331046535|gb|EGI18624.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M718] Length = 754 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 16/112 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-----FKF--------PTPLGIKPRLGDILEEHI 47 + A FGV QRR R++++ ++ F+F P+ + I Sbjct: 198 LDAQYFGVAQRRRRVFVVASARTDLDPATVLFEFKGVRRNIAPSRKKKEIASAIIANGAA 257 Query: 48 DDKSTISNKLWEGHQKRKENNKIAGKGFGYGLF--FENSATTNTLSARYYKD 97 +++ L ++ K F F + + T +T+ AR +KD Sbjct: 258 ISGESLNPCLHADMPPGMKSTKA-VNAFRMAAFGEYIDDETASTVKARDFKD 308 >gi|169342462|ref|ZP_02863522.1| Dcm [Clostridium perfringens C str. JGS1495] gi|169299461|gb|EDS81526.1| Dcm [Clostridium perfringens C str. JGS1495] Length = 339 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 2/58 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + ++ RER++I+ FKF L I E +D+K + Sbjct: 148 LSGINYNSAHSRERVFIVSIRKDIDNGSFKFKEGNDNLVTLESITENFVDEKYYCKDN 205 >gi|195873685|ref|ZP_02698511.2| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195632788|gb|EDX51242.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 382 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 3/31 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT 31 + + D+G+PQ RERL+++ F F F Sbjct: 163 LNSLDYGIPQDRERLFVVGFKK---SFIFDK 190 >gi|75906954|ref|YP_321250.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413] gi|75700679|gb|ABA20355.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413] Length = 385 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A ++GVPQ RER+ ++ F + F +L + L +K++ Sbjct: 172 INAIEYGVPQNRERIILLGFSKKFFQ-DFWGINSHNQKLLEFLFPWESKVLYPKDKVFAY 230 >gi|228950066|ref|ZP_04112251.1| DNA-cytosine methyltransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228809593|gb|EEM56029.1| DNA-cytosine methyltransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 445 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 31/70 (44%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 M+A D+GVPQ RER+ +I + F L LG++L++ + K + Sbjct: 165 MQAHDYGVPQLRERVIVIGTKSNINPFSVIPKLDGPRTLGEVLKDCPKSEFFSFKKEYAH 224 Query: 61 HQKRKENNKI 70 + + + Sbjct: 225 VMQLIKPGQC 234 >gi|172038906|ref|YP_001805407.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142] gi|171700360|gb|ACB53341.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142] Length = 427 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 34/91 (37%), Gaps = 3/91 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI---LEEHIDDKSTISNKL 57 + A ++GVPQ RERL+++ +P + + ++ L + D ++ Sbjct: 157 LNAANYGVPQLRERLFLLGAKQGLKLPNYPDFVTKYNQQDNLSLPLTPTVKDAIQDLPEV 216 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTN 88 + + IA G ++N Sbjct: 217 NHYSELNHRDWVIANYGKPSQYVETLRKSSN 247 >gi|153835199|ref|ZP_01987866.1| site-specific DNA methylase [Vibrio harveyi HY01] gi|148868309|gb|EDL67437.1| site-specific DNA methylase [Vibrio harveyi HY01] Length = 475 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 39/128 (30%), Gaps = 31/128 (24%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-----IKPRLGDILEEHIDDKSTISN 55 +KACD+G RER +++ + ++P P D ++ I KS Sbjct: 200 LKACDYGCGTSRERFFLVA-RKDGEDIQWPEPTHGEGKASYVTAADSVDWSIPVKSIFGR 258 Query: 56 KL---WEGHQKRKENNKI----AGKGFG-----------------YGLFFENSATTNTLS 91 K + ++ + + F T++ Sbjct: 259 KRPLAPKTLERIAKGLEKFVINNDNPFFVPEQAQIPFVTECANSSNQRNMPIDEPLRTIT 318 Query: 92 ARYYKDGS 99 A Y K GS Sbjct: 319 A-YPKGGS 325 >gi|332665024|ref|YP_004447812.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM 1100] gi|332333838|gb|AEE50939.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM 1100] Length = 366 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 34/104 (32%), Gaps = 11/104 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLN------PSVEFKFPTPLGIKP--RLGDILEEHIDDKST 52 + A DF VPQ RER++ I F N + P + +L++ + + Sbjct: 144 LNATDFDVPQARERVFFIGFKNNSQIIPDLTKMLEPYKIKAPTVRAALSVLDKAGEGNNI 203 Query: 53 ISNKLWEGHQKR---KENNKIAGKGFGYGLFFENSATTNTLSAR 93 K +++ G G + TL A Sbjct: 204 GVCKAKITLTPNPVMRKSPFAGMLFNGLGRPVKIDGYCATLPAS 247 >gi|33338827|gb|AAQ14149.1| Dmt, incomplete [Enterobacteria phage P1] Length = 638 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 16/112 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-----FKF--------PTPLGIKPRLGDILEEHI 47 + A FGV QRR R++++ ++ F+F P + I Sbjct: 198 LDAQYFGVAQRRRRVFVVASARTDLDPATVLFEFEGVRRNIAPRRKKKEIASAIIANGAA 257 Query: 48 DDKSTISNKLWEGHQKRKENNKIAGKGFGYGLF--FENSATTNTLSARYYKD 97 +++ L ++ K F F + + T +T+ AR +KD Sbjct: 258 ISGESLNPCLHADMPPSMKSTKA-VNAFRMAAFGEYIDDETASTVKARDFKD 308 >gi|46401691|ref|YP_006537.1| Dmt [Enterobacteria phage P1] gi|33338718|gb|AAQ14041.1| Dmt [Enterobacteria phage P1] Length = 754 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 16/112 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-----FKF--------PTPLGIKPRLGDILEEHI 47 + A FGV QRR R++++ ++ F+F P + I Sbjct: 198 LDAQYFGVAQRRRRVFVVASARTDLDPATVLFEFEGVRRNIAPRRKKKEIASAIIANGAA 257 Query: 48 DDKSTISNKLWEGHQKRKENNKIAGKGFGYGLF--FENSATTNTLSARYYKD 97 +++ L ++ K F F + + T +T+ AR +KD Sbjct: 258 ISGESLNPCLHADMPPSMKSTKA-VNAFRMAAFGEYIDDETASTVKARDFKD 308 >gi|238917713|ref|YP_002931230.1| DNA (cytosine-5-)-methyltransferase [Eubacterium eligens ATCC 27750] gi|238873073|gb|ACR72783.1| DNA (cytosine-5-)-methyltransferase [Eubacterium eligens ATCC 27750] Length = 477 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 31/109 (28%), Gaps = 12/109 (11%) Query: 1 MKACDFGVPQRRERLYIID---------FLNPSVEFKFPTPLGIKPRLGDILEEHIDDKS 51 + A +FGVPQ RERL I N P L E + Sbjct: 247 LNAKNFGVPQNRERLIYIGNCMGVDNEQIFNEIFALSENIPEHNLGDALFALRELEASRV 306 Query: 52 TISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLS---ARYYKD 97 S + K + Y + N +S ARY D Sbjct: 307 KNSTESGSIESGYKIEKNNITETNDYISYINQDKVVNVVSNHKARYNND 355 >gi|302836690|ref|XP_002949905.1| maintenance DNA methyltransferase [Volvox carteri f. nagariensis] gi|300264814|gb|EFJ49008.1| maintenance DNA methyltransferase [Volvox carteri f. nagariensis] Length = 2277 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 19/34 (55%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 + A FGVPQ R+R +I L V ++PTP Sbjct: 1935 LNAGHFGVPQSRKRTFIWAALPGEVLPEWPTPRH 1968 >gi|302559403|ref|ZP_07311745.1| modification methylase NaeI [Streptomyces griseoflavus Tu4000] gi|302477021|gb|EFL40114.1| modification methylase NaeI [Streptomyces griseoflavus Tu4000] Length = 429 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKP-RLGDILEEHIDDKSTISNKLW 58 + A DFGVPQ R R ++ L E F +P L +G LE + K K W Sbjct: 153 LHASDFGVPQLRPRFVLVALLPEYAEYFSWPEELPDARLTVGAALEGLMAAKGWEGAKTW 212 Query: 59 E 59 Sbjct: 213 A 213 >gi|167759130|ref|ZP_02431257.1| hypothetical protein CLOSCI_01477 [Clostridium scindens ATCC 35704] gi|167663248|gb|EDS07378.1| hypothetical protein CLOSCI_01477 [Clostridium scindens ATCC 35704] Length = 324 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 36/94 (38%), Gaps = 12/94 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWE 59 + A +FG+PQ RER++ I LN +F+F + R + LE+ + D ++ Sbjct: 164 LDAREFGLPQARERVFTISVLNGE-KFEFDDLIRTPMRNLQEFLEDDVPDIYDVTQP--- 219 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + G T++ R Sbjct: 220 -------SVLACIGEKGIRRATVIKDCAYTITTR 246 >gi|119488852|ref|ZP_01621814.1| NgoIM [Lyngbya sp. PCC 8106] gi|119455013|gb|EAW36155.1| NgoIM [Lyngbya sp. PCC 8106] Length = 385 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 6/92 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + FG+PQ R+R++I+ + + PL + +L + D + + E Sbjct: 144 INPLHFGIPQNRDRVFILGTKSTTKN-----PLPNIEKYLVLLTQGDCDVLEMGVETLEK 198 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + K K + +G+ ++N T + A Sbjct: 199 CLQ-PIVFKQQTKNYNWGIAYQNKMYTQEIPA 229 >gi|89243223|gb|ABD64771.1| Met1 [Volvox carteri f. nagariensis] Length = 2262 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 19/34 (55%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 + A FGVPQ R+R +I L V ++PTP Sbjct: 1920 LNAGHFGVPQSRKRTFIWAALPGEVLPEWPTPRH 1953 >gi|323650698|gb|ADX97433.1| M1.BspACI [Bacillus psychrodurans] Length = 320 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 5/60 (8%) Query: 1 MKACDFGVPQRRERLYIID-----FLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 M A +GVPQ R R Y + F + FP ++ + +E+++ +S Sbjct: 144 MNAKYYGVPQNRNRWYCVGYDASQFSKIDIHNIFPEEENLETFIDSYIEKNVSQDYQMSK 203 >gi|242217704|ref|XP_002474649.1| predicted protein [Postia placenta Mad-698-R] gi|220726179|gb|EED80137.1| predicted protein [Postia placenta Mad-698-R] Length = 1157 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDK 50 ++A +G PQ R R ++I + FP P P L D L+ +K Sbjct: 867 LQAAHYGTPQSRIRFFLIAARSGHPLPAFPQPTHDFP-LKDSLKLEFTNK 915 >gi|168207074|ref|ZP_02633079.1| Dcm [Clostridium perfringens E str. JGS1987] gi|170661488|gb|EDT14171.1| Dcm [Clostridium perfringens E str. JGS1987] Length = 339 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 22/65 (33%), Gaps = 4/65 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + ++ RER++I+ F+F L I E +D+K + Sbjct: 148 LSGINYNSAHSRERVFIVSIRKDIDNGSFEFKEGNDNIVTLESITESFVDEKYYCKDN-- 205 Query: 59 EGHQK 63 + Sbjct: 206 SYLKN 210 >gi|86559667|ref|YP_473487.1| cytosine methyltransferase [Clostridium perfringens] gi|86475939|dbj|BAE79114.1| cytosine methyltransferase [Clostridium perfringens] Length = 314 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 2/58 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + ++ RER++I+ FKF L I E +D+K + Sbjct: 148 LSGINYNSAHSRERVFIVSIRKDIDNGSFKFKEGNDNLVTLESITENFVDEKYYCKDN 205 >gi|224438066|ref|ZP_03659005.1| DNA-cytosine methyltransferase [Helicobacter cinaedi CCUG 18818] Length = 342 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 37/90 (41%), Gaps = 2/90 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q RER+Y + +F F + K L + L D+ + ++ ++ Sbjct: 164 LNSLDFALAQARERVYFVGIRKDKKRDFSF-SQRMTKKALKEFLTPKQDNIFSRDSQSYQ 222 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNT 89 + EN G+ + ++ +T Sbjct: 223 TFLRFLENKYNKGRFDLTQILDKDFLVLDT 252 >gi|209527672|ref|ZP_03276170.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209491900|gb|EDZ92257.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 429 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 25/96 (26%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF----------------------PTPLGIKPR 38 + + ++GVPQ R R Y++ LN + F P P + Sbjct: 148 LNSSNYGVPQNRVRAYMMGVLNQTPHFNLVSDLGAKDSHSYESGQLSLFSAPKPS---CK 204 Query: 39 LGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKG 74 + DILE++ S + + N G Sbjct: 205 VRDILEDNPPHHYDCSAEFTTALRTFLRGNLEKLHG 240 >gi|145250405|ref|XP_001396716.1| C-5 cytosine methyltransferase DmtA [Aspergillus niger CBS 513.88] gi|134082235|emb|CAL00990.1| unnamed protein product [Aspergillus niger] Length = 613 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 32/102 (31%), Gaps = 8/102 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 +K D+GVPQ R RL II FP P G I+ + + Sbjct: 450 LKCADYGVPQLRRRLVIIASGPGETLPPFPEATHGLPGSGLRDYVTINQVISRIPRGAPD 509 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSAR----YYKDG 98 H + A + + T++ Y+ G Sbjct: 510 HDVEGALQRSAIDRRPFNA----NRQARTITCGGGENYHPSG 547 >gi|323949009|gb|EGB44903.1| DNA adenine methylase [Escherichia coli H252] Length = 762 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 16/112 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-----FKF--------PTPLGIKPRLGDILEEHI 47 + A FGV QRR R++++ ++ F+F P+ + I Sbjct: 201 LDAQYFGVAQRRRRVFVVASARTDLDPATILFEFEGVRRDIAPSRKKKEIASAIIANGAA 260 Query: 48 DDKSTISNKLWEGHQKRKENNKIAGKGFGYGLF--FENSATTNTLSARYYKD 97 +++ L ++ K F F + + T +T+ AR +KD Sbjct: 261 ISGESLNPCLHADIPPGMKSTKA-VNAFRMAAFGEYIDDETASTVKARDFKD 311 >gi|294794108|ref|ZP_06759245.1| DNA (cytosine-5-)-methyltransferase [Veillonella sp. 3_1_44] gi|294455678|gb|EFG24050.1| DNA (cytosine-5-)-methyltransferase [Veillonella sp. 3_1_44] Length = 527 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 25/87 (28%), Gaps = 10/87 (11%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 A FGVPQ R R +I +P P D L + + + + Sbjct: 317 NAEWFGVPQTRRRYIVIGIRKDL----YPNINPSLPGNPDTLNINTVEDAIMD------L 366 Query: 62 QKRKENNKIAGKGFGYGLFFENSATTN 88 + + K Y S N Sbjct: 367 VSYEAGYEKDYKEIPYNSDDILSDYAN 393 >gi|328947038|ref|YP_004364375.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] gi|328447362|gb|AEB13078.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] Length = 466 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 5 DFGVPQRRERLYIIDFLN---PSVEFKFPTPLGIKPRLGDILEEHIDDKS 51 +FG+PQ R+R+YI+ L +FKFP + + DD Sbjct: 173 NFGIPQHRKRIYIVGRLKSKGGLKDFKFPPHEEKVECNIKSVIDESDDDF 222 >gi|78778049|ref|YP_394364.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM 1251] gi|78498589|gb|ABB45129.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM 1251] Length = 435 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 12/102 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE- 59 + A D+G+PQRR R++I+ + N + P + ++L + T K+ + Sbjct: 187 INASDYGMPQRRRRVFIMAYKNGTK----PYLNLQQKTPFEVLSKDGIFAKTFPIKMIQE 242 Query: 60 ---GHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 K ++ F +NS + Y DG Sbjct: 243 DDIFSLKLSDDLVDITDNFNKNTSNKNSFY----DSGYMIDG 280 >gi|67540936|ref|XP_664242.1| hypothetical protein AN6638.2 [Aspergillus nidulans FGSC A4] gi|28208637|gb|AAO37378.1|AF428247_1 c5 cytosine methyltransferase DmtA [Emericella nidulans] gi|40738977|gb|EAA58167.1| hypothetical protein AN6638.2 [Aspergillus nidulans FGSC A4] gi|259480219|tpe|CBF71150.1| TPA: C5 cytosine methyltransferase DmtAPutative uncharacterized protein ; [Source:UniProtKB/TrEMBL;Acc:Q876R1] [Aspergillus nidulans FGSC A4] Length = 615 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 29/102 (28%), Gaps = 7/102 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + +GVPQ R+RL II + P P P G I Sbjct: 453 LNCMWYGVPQSRKRLIIIASGPGESLPRLPRPTHGLPGSGLRDLTTISQAIRDIPTGSPD 512 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSAR----YYKDG 98 H + G F N T++ Y+ G Sbjct: 513 HDV--VAARGRGVHNRRAPFDGN-RQARTITCGGGDNYHPSG 551 >gi|196047975|ref|ZP_03115153.1| C-5 cytosine-specific DNA methylase [Bacillus cereus 03BB108] gi|196021231|gb|EDX59960.1| C-5 cytosine-specific DNA methylase [Bacillus cereus 03BB108] Length = 471 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++ACD+G P R+RL++I +P P P+ ++L + T + + Sbjct: 166 LRACDYGAPTIRKRLFLIA-RCDGKPINWPKPTHGDPKSKEVLNGTLKPWRTAAEIIDWS 224 Query: 61 HQKRKENNKIA 71 + N+ Sbjct: 225 LECPSIFNRKK 235 >gi|261420917|ref|YP_003254598.1| DNA-cytosine methyltransferase [Geobacillus sp. Y412MC61] gi|319768595|ref|YP_004134095.1| DNA-cytosine methyltransferase [Geobacillus sp. Y412MC52] gi|261377375|gb|ACX80116.1| DNA-cytosine methyltransferase [Geobacillus sp. Y412MC61] gi|317113461|gb|ADU95952.1| DNA-cytosine methyltransferase [Geobacillus sp. Y412MC52] Length = 370 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 3/53 (5%) Query: 5 DFGVPQRRERLYIIDFLNP-SVEFKFPTPL--GIKPRLGDILEEHIDDKSTIS 54 ++GVPQ R R+ I+ +++FK P P + + + + Sbjct: 165 EYGVPQMRHRIIIVGIRKDLNLKFKVPAPTTPDKYVTAKEAITNPPIPEDAPN 217 >gi|307152045|ref|YP_003887429.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] gi|306982273|gb|ADN14154.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] Length = 323 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 30/95 (31%), Gaps = 8/95 (8%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 D+G PQ R+R+ II S ++ P P E D + I N Sbjct: 147 NFADYGTPQLRQRVLIIGVRGDSPYIYQKPNPTHPPENYKTAGEALKDVEKVIYNNEHLK 206 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYY 95 Q + + G ++RYY Sbjct: 207 IQAKTKKMLNLIPEGGNYKSIPK-------TSRYY 234 >gi|127439|sp|P05302|MTD1_DESNO RecName: Full=Modification methylase DdeI; Short=M.DdeI; AltName: Full=Cytosine-specific methyltransferase DdeI gi|79418|pir||S00543 site-specific DNA-methyltransferase (cytosine-specific) (EC 2.1.1.73) DdeI - Desulfovibrio desulfuricans gi|40795|emb|CAA68505.1| DdeI methylase [Desulfovibrio vulgaris] Length = 415 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 16/25 (64%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV 25 + ACD+GVPQ R+R++ I + Sbjct: 149 LNACDYGVPQSRQRVFFIGLKSDRP 173 >gi|116620819|ref|YP_822975.1| DNA-cytosine methyltransferase [Candidatus Solibacter usitatus Ellin6076] gi|116223981|gb|ABJ82690.1| DNA-cytosine methyltransferase [Candidatus Solibacter usitatus Ellin6076] Length = 419 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 14/45 (31%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--------------FKFPT 31 + A D GVPQ RER++I+ ++ F +P Sbjct: 195 LNALDLGVPQDRERVFIVGVHRRMIKRLYGLRMDKRQRDWFPWPK 239 >gi|159897859|ref|YP_001544106.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus ATCC 23779] gi|159890898|gb|ABX03978.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus ATCC 23779] Length = 415 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 8/55 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNP--------SVEFKFPTPLGIKPRLGDILEEHI 47 + A DFGVPQ R+R ++ +F P + +E+ Sbjct: 194 LDAADFGVPQHRKRFFLFGIRTDLTTDPNIRLEKFINPYRTSTLTTVAQAIEDLP 248 >gi|307330945|ref|ZP_07610077.1| DNA-cytosine methyltransferase [Streptomyces violaceusniger Tu 4113] gi|306883406|gb|EFN14460.1| DNA-cytosine methyltransferase [Streptomyces violaceusniger Tu 4113] Length = 386 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 35/101 (34%), Gaps = 15/101 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPT-PLGIKPRLGDILEEHIDDKSTISNK-L 57 ++ACD+GVPQ R R ++ L E F++ + + L + + S Sbjct: 163 LEACDYGVPQLRPRAILVAMLKEYAEYFEWTEAKTRPLLTVAEALASSMRKRFKDSGHPQ 222 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 W+ +R G + TL K G Sbjct: 223 WKTFYERWLTEAEKG------------SVAPTLVGGSKKHG 251 >gi|23306229|emb|CAD42182.3| DNA methyltransferase [Paracentrotus lividus] Length = 1613 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 24/58 (41%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 ++A +GVPQ R R I+ +P PL + L I +K SN W Sbjct: 1292 LQAGQYGVPQTRRRAIILAAAPGEKLPFYPEPLHVFSTRACSLSVMIGEKKIESNNQW 1349 >gi|23306230|emb|CAD43077.1| DNA methyltransferase 1a [Paracentrotus lividus] Length = 1461 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 24/58 (41%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 ++A +GVPQ R R I+ +P PL + L I +K SN W Sbjct: 1140 LQAGQYGVPQTRRRAIILAAAPGEKLPFYPEPLHVFSTRACSLSVMIGEKKIESNNQW 1197 >gi|226293221|gb|EEH48641.1| C-5 cytosine methyltransferase DmtA [Paracoccidioides brasiliensis Pb18] Length = 654 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 17/34 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 +K D+GVPQ R+RL I+ FP P Sbjct: 471 LKCQDYGVPQPRQRLIILGSGPGEPLPPFPKPTH 504 >gi|167746072|ref|ZP_02418199.1| hypothetical protein ANACAC_00767 [Anaerostipes caccae DSM 14662] gi|167654587|gb|EDR98716.1| hypothetical protein ANACAC_00767 [Anaerostipes caccae DSM 14662] Length = 476 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 1/43 (2%) Query: 1 MKACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLGIKPRLGDI 42 + A DFGVPQ RERL I E F + + D Sbjct: 251 LNAKDFGVPQNRERLIFIGNKLGIDNEVLFDEIESLSKTIPDY 293 >gi|319787787|ref|YP_004147262.1| DNA-cytosine methyltransferase [Pseudoxanthomonas suwonensis 11-1] gi|317466299|gb|ADV28031.1| DNA-cytosine methyltransferase [Pseudoxanthomonas suwonensis 11-1] Length = 425 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 33/115 (28%), Gaps = 25/115 (21%) Query: 3 ACDFGVPQRRERLYIIDFLNP--------------SVEFKFPTP-LGIKPRLGDILEEHI 47 A D+GVPQ R R+ ++ N P P G P L D+L + I Sbjct: 186 AKDYGVPQNRPRVLLVGVRNDVGSGLKREGKDEDAIARGYLPAPAPGSAPDLVDLLGDLI 245 Query: 48 DDKSTISNKLWEGHQKRKENNKIA----------GKGFGYGLFFENSATTNTLSA 92 D K K + K E S T+ A Sbjct: 246 DPDYVNGGKTLAYPHSAKTAIQKQLRTPALGGAPLKKGAPVTEHEYSKHNPTIVA 300 >gi|327356617|gb|EGE85474.1| C-5 cytosine methyltransferase DmtA [Ajellomyces dermatitidis ATCC 18188] Length = 661 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 19/41 (46%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGD 41 ++ D+GVPQ R+RL I+ FP P P + Sbjct: 468 LRCQDYGVPQSRQRLVILASGPGEPLPPFPKPTHGPPDTSN 508 >gi|239614647|gb|EEQ91634.1| C-5 cytosine methyltransferase DmtA [Ajellomyces dermatitidis ER-3] Length = 661 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 19/41 (46%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGD 41 ++ D+GVPQ R+RL I+ FP P P + Sbjct: 468 LRCQDYGVPQSRQRLVILASGPGEPLPPFPKPTHGPPDTSN 508 >gi|261196301|ref|XP_002624554.1| C-5 cytosine methyltransferase DmtA [Ajellomyces dermatitidis SLH14081] gi|239587687|gb|EEQ70330.1| C-5 cytosine methyltransferase DmtA [Ajellomyces dermatitidis SLH14081] Length = 661 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 19/41 (46%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGD 41 ++ D+GVPQ R+RL I+ FP P P + Sbjct: 468 LRCQDYGVPQSRQRLVILASGPGEPLPPFPKPTHGPPDTSN 508 >gi|238059022|ref|ZP_04603734.1| DNA-cytosine methyltransferase [Micromonospora sp. ATCC 39149] gi|237886458|gb|EEP75286.1| DNA-cytosine methyltransferase [Micromonospora sp. ATCC 39149] Length = 442 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A DFGVPQ R+RL + + E P G + L L H K + + E Sbjct: 145 LDAADFGVPQTRKRLVFVGLRSDLGE-TPPVFEGTQATLHLALVRHGKGKYALETRRDE 202 >gi|18202059|sp|O52702|MTA1_ACEPA RecName: Full=Modification methylase ApaLI; Short=M.ApaLI; AltName: Full=Cytosine-specific methyltransferase ApaLI gi|2865599|gb|AAC97180.1| ApaLI methyltransferase [Acetobacter pasteurianus] Length = 429 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 9/92 (9%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 +GVPQ R+R+ II ++F+FP L K L Sbjct: 152 NLAAYGVPQTRKRVLIIGNRLG-IDFQFPEELYSFDS--------GKAKKASGKPLAPSL 202 Query: 62 QKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + A + + +S N AR Sbjct: 203 AEAVAGLGPAASDKDALVPYASSEPVNAFDAR 234 >gi|1644234|dbj|BAA11339.1| ApaLI methylase [Acetobacter pasteurianus] Length = 429 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 9/92 (9%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 +GVPQ R+R+ II ++F+FP L K L Sbjct: 152 NLAAYGVPQTRKRVLIIGNRLG-IDFQFPEELYSFDS--------GKAKKASGKPLAPSL 202 Query: 62 QKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + A + + +S N AR Sbjct: 203 AEAVAGLGPAASDKDALVPYASSEPVNAFDAR 234 >gi|329960681|ref|ZP_08299024.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fluxus YIT 12057] gi|328532554|gb|EGF59348.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fluxus YIT 12057] Length = 572 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 17/25 (68%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV 25 + A D+G+PQRR R YI+ + SV Sbjct: 163 INAADYGMPQRRRRTYIVGYRKGSV 187 >gi|256419690|ref|YP_003120343.1| DNA-cytosine methyltransferase [Chitinophaga pinensis DSM 2588] gi|256034598|gb|ACU58142.1| DNA-cytosine methyltransferase [Chitinophaga pinensis DSM 2588] Length = 390 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 1/30 (3%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPT 31 + D+ VPQ R+R ++ L +F FP Sbjct: 163 NSADYRVPQNRKRFMLVGVLKGK-KFIFPE 191 >gi|23306232|emb|CAD43079.1| DNA methyltransferase 1c [Paracentrotus lividus] Length = 1375 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 24/58 (41%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 ++A +GVPQ R R I+ +P PL + L I +K SN W Sbjct: 1292 LQAGQYGVPQTRRRAIILAAAPGEKLPFYPEPLHVFSTRACSLSVMIGEKKIESNNQW 1349 >gi|315053597|ref|XP_003176173.1| modification methylase HphIA [Arthroderma gypseum CBS 118893] gi|311338019|gb|EFQ97221.1| modification methylase HphIA [Arthroderma gypseum CBS 118893] Length = 581 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 14/33 (42%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 D+GVPQ R RL II FP P Sbjct: 421 NCKDYGVPQSRRRLVIIASGPGEELPNFPLPTH 453 >gi|307293581|ref|ZP_07573425.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1] gi|306879732|gb|EFN10949.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1] Length = 418 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKF 29 A DFGVPQ RER++ + ++F F Sbjct: 153 AADFGVPQTRERVFFFGTRDD-IKFPF 178 >gi|325679553|ref|ZP_08159133.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8] gi|324108840|gb|EGC03076.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8] Length = 708 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPL-GIKPRLGDILEE 45 + + D+GVPQ R+R I + + + P P + D + + Sbjct: 499 LNSADYGVPQLRQRAIFICSKDIPI--ELPKPTAKKVTTVRDAIFD 542 >gi|157164246|ref|YP_001466260.1| modification methylase HaeIII (cytosine-specificmethyltransferase HaeIII; M.HaeIII) [Campylobacter concisus 13826] gi|112801543|gb|EAT98887.1| modification methylase HaeIII (Cytosine-specificmethyltransferase HaeIII) (M.HaeIII) [Campylobacter concisus 13826] Length = 388 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 14/24 (58%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS 24 + A DFGVPQ R+R+ II Sbjct: 171 LNAVDFGVPQDRKRIIIIGTRKDL 194 >gi|77412067|ref|ZP_00788393.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae CJB111] gi|77161872|gb|EAO72857.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae CJB111] Length = 394 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 30/97 (30%), Gaps = 4/97 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + D+GVPQ RER+Y + L + P L ++ + + + Sbjct: 128 NSKDYGVPQNRERIYTLGHLRSRGRRQVLPLSGESGSHLKQLIGGMQSYRVYDPSGIATT 187 Query: 61 HQKRKENNKIAGKGF---GYGLFFENSATTNTLSARY 94 + + + ++ARY Sbjct: 188 LVGEGGGLGAKTGLYLIDQSLTESKLTDEARCITARY 224 >gi|320527420|ref|ZP_08028601.1| DNA (cytosine-5-)-methyltransferase [Solobacterium moorei F0204] gi|320132133|gb|EFW24682.1| DNA (cytosine-5-)-methyltransferase [Solobacterium moorei F0204] Length = 428 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 1/66 (1%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 A +FGV Q R R+ I+ +L S K+P L I+ K + Sbjct: 207 NARNFGVLQNRRRMIIVGWLKESG-LKYPDFLKIEANAIVNDLFRDLPKLYPGESADKYS 265 Query: 62 QKRKEN 67 + + N Sbjct: 266 KAKPSN 271 >gi|317480905|ref|ZP_07939986.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_1_36] gi|316902990|gb|EFV24863.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_1_36] Length = 441 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 6 FGVPQRRERLYIIDFLN---PSVEFKFPTPLG-IKPRLGDILEEHIDDKSTISN 55 FG+PQ R R+YI+ L +F+FP + + + DIL D ++ Sbjct: 150 FGIPQHRTRIYIVGRLKSKGGLKDFRFPEHIERPECNINDILVPDDTDYMSLRP 203 >gi|23306233|emb|CAD43080.2| DNA methyltransferase 1d [Paracentrotus lividus] Length = 1429 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 24/58 (41%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 ++A +GVPQ R R I+ +P PL + L I +K SN W Sbjct: 1292 LQAGQYGVPQTRRRAIILAAAPGEKLPFYPEPLHVFSTRACSLSVMIGEKKIESNNQW 1349 >gi|171684935|ref|XP_001907409.1| hypothetical protein [Podospora anserina S mat+] gi|170942428|emb|CAP68080.1| unnamed protein product [Podospora anserina S mat+] Length = 752 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 31/96 (32%), Gaps = 8/96 (8%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTI--SNKLWEGHQK 63 +G+ Q R RL II FP P K D L+ + + ++ GH Sbjct: 480 YGLAQTRRRLVIIGAGPGEKLPPFPPPTHSKTPEVDGLKPVVTPYQALLAIKRIKSGHPM 539 Query: 64 RKENNKIAGKGFGYGLFFENSATTNTLSAR----YY 95 ++ S NT++ Y+ Sbjct: 540 HNLATVHRFDP--PKRPWDPSKPVNTITCSGGQNYH 573 >gi|241758593|ref|ZP_04756708.1| site-specific DNA-methyltransferase [Neisseria flavescens SK114] gi|241321245|gb|EER57417.1| site-specific DNA-methyltransferase [Neisseria flavescens SK114] Length = 364 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 11/71 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE----FKFPTPL-------GIKPRLGDILEEHIDD 49 + A ++GVPQ RER+ ++ FLN V+ F + + P D+ Sbjct: 164 INAIEYGVPQDRERIILVGFLNQHVDTLQKFDWDAHILFPDALGKNWPTTEDVGSAVSQP 223 Query: 50 KSTISNKLWEG 60 ++ + Sbjct: 224 ENIYPELTVQY 234 >gi|332968936|gb|EGK07982.1| DNA-cytosine methyltransferase [Desmospora sp. 8437] Length = 379 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 + A D+GVPQ R R +I+ + FP +IL Sbjct: 148 LCAADYGVPQTRYRAFIVGSKLDTP-LNFPPQKTHYNPDKNIL 189 >gi|262283394|ref|ZP_06061160.1| cytosine-specific methyltransferase NlaX [Streptococcus sp. 2_1_36FAA] gi|262260885|gb|EEY79585.1| cytosine-specific methyltransferase NlaX [Streptococcus sp. 2_1_36FAA] Length = 460 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 1/31 (3%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFP 30 + + FGVPQ R+R++++ + FP Sbjct: 147 LNSSHFGVPQNRQRIFLVGHSRRRGTQPIFP 177 >gi|333024773|ref|ZP_08452837.1| putative DNA-cytosine methyltransferase [Streptomyces sp. Tu6071] gi|332744625|gb|EGJ75066.1| putative DNA-cytosine methyltransferase [Streptomyces sp. Tu6071] Length = 386 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 1/40 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRL 39 + A D+GVPQ R R +I E + P P + Sbjct: 155 LNAADYGVPQARRRAIVIATRRDLGEPLRHPIPSHRRATD 194 >gi|15894780|ref|NP_348129.1| DNA-methyltransferase (cytosine-specific), ortholog of BSP6I Bsubtilis [Clostridium acetobutylicum ATCC 824] gi|15024448|gb|AAK79469.1|AE007660_12 DNA-methyltransferase (cytosine-specific), ortholog of BSP6I Bsubtilis [Clostridium acetobutylicum ATCC 824] gi|325508918|gb|ADZ20554.1| DNA-methyltransferase (cytosine-specific) [Clostridium acetobutylicum EA 2018] Length = 415 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 4/98 (4%) Query: 1 MKACDFG-VPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + DF +PQ RER+YI+ FLN KF + + +D++ K+ + Sbjct: 204 LNTMDFSHLPQNRERIYIVGFLNKKDAEKF---TMFDNIGEFYINKTVDERVRDIKKVID 260 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKD 97 + +K Y +F + + Y KD Sbjct: 261 YTLTKNTGDKYYYTKEKYPKYFITEEEYDKIPESYRKD 298 >gi|320009547|gb|ADW04397.1| DNA-cytosine methyltransferase [Streptomyces flavogriseus ATCC 33331] Length = 431 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 3 ACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLG-IKPRLGDILEEHIDDK 50 A DFGVPQ R R ++ + F +P PL +P++G+ L + + + Sbjct: 154 AADFGVPQLRPRFVLVALQREYAPYFSWPKPLEGERPKVGETLYDLMAAR 203 >gi|332023953|gb|EGI64171.1| DNA (cytosine-5)-methyltransferase PliMCI [Acromyrmex echinatior] Length = 1449 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 30/66 (45%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++A +GVPQ R R+ ++ + KFP P + + L +D K I+N + + Sbjct: 1102 LQAGSYGVPQTRRRMILLAAAPGEILPKFPIPTHVFSKRCCSLAVIVDSKRYITNCVQKE 1161 Query: 61 HQKRKE 66 + Sbjct: 1162 SAPYRA 1167 >gi|253569226|ref|ZP_04846636.1| cytosine-specific DNA methylase [Bacteroides sp. 1_1_6] gi|251841245|gb|EES69326.1| cytosine-specific DNA methylase [Bacteroides sp. 1_1_6] Length = 448 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 27/88 (30%), Gaps = 11/88 (12%) Query: 6 FGVPQRRERLYIID---FLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQ 62 FGVPQ R R+YI+ F+FP + D + Sbjct: 151 FGVPQHRNRIYIVGRLHSKGGLKGFEFPDYTQRPECHISSIIHPEDTDYM-------SLR 203 Query: 63 KRKENNKIAGKGFGYGLFFENSATTNTL 90 + A + F L +++ T Sbjct: 204 PITRKHLEAWEHF-LQLLDKHNVPVPTF 230 >gi|156365066|ref|XP_001626663.1| predicted protein [Nematostella vectensis] gi|156213548|gb|EDO34563.1| predicted protein [Nematostella vectensis] Length = 1263 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 22/55 (40%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GVPQ R R I+ +P P L +D+K SN Sbjct: 949 LQAGCYGVPQTRRRAIIMAAAPGEELPLYPEPTHCFSPRTCQLTVMVDEKKFTSN 1003 >gi|126700764|ref|YP_001089661.1| putative DNA-methyltransferase [Clostridium difficile 630] gi|115252201|emb|CAJ70040.1| putative DNA-methyltransferase [Clostridium difficile] Length = 541 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPL--GIKPRLGDILEEHIDDKSTISN 55 + + D+GVPQ RER +I + + + P P+ + D + + + S Sbjct: 314 LNSIDYGVPQNRERFVLIGAKKDFLKNKKIETPKPIVGENYVTVRDAIGDLAE--YEASK 371 Query: 56 KLWEGHQKRKENNKIAGKGFGYGLFFENSATTN 88 + ++ NN F + +++ N Sbjct: 372 GSMDYCFEKNSNNIEK--DFYRKIILDSNKIYN 402 >gi|308172453|ref|YP_003919158.1| C-5 cytosine-specific DNA methylase [Bacillus amyloliquefaciens DSM 7] gi|307605317|emb|CBI41688.1| C-5 cytosine-specific DNA methylase [Bacillus amyloliquefaciens DSM 7] Length = 458 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 1/71 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 +KACD+G P R+RL++I + +P P P+ + + T S + Sbjct: 169 LKACDYGAPTIRKRLFLIARRDGRP-IIWPEPTHGDPKSATVKSGKLKPWRTASEIMDWS 227 Query: 61 HQKRKENNKIA 71 + N+ Sbjct: 228 LETPSIFNRKK 238 >gi|26990694|ref|NP_746119.1| DNA-cytosine methyltransferase [Pseudomonas putida KT2440] gi|24985686|gb|AAN69583.1|AE016592_2 DNA-cytosine methyltransferase [Pseudomonas putida KT2440] Length = 348 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 16/55 (29%), Gaps = 3/55 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPL-GIKPRLGDILEEHIDDKST 52 + + FGV Q R R +I F FP + D + Sbjct: 179 INSSGFGVAQHRRRYFIAGISKEIKNKAFTFPDATVNNFRTVEDEISGLPHPVYY 233 >gi|328910553|gb|AEB62149.1| C-5 cytosine-specific DNA methylase [Bacillus amyloliquefaciens LL3] Length = 458 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 1/71 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 +KACD+G P R+RL++I + +P P P+ + + T S + Sbjct: 169 LKACDYGAPTIRKRLFLIARRDGRP-IIWPEPTHGDPKSATVKSGKLKPWRTASEIMDWS 227 Query: 61 HQKRKENNKIA 71 + N+ Sbjct: 228 LETPSIFNRKK 238 >gi|125974232|ref|YP_001038142.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC 27405] gi|125714457|gb|ABN52949.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC 27405] Length = 483 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 14/19 (73%) Query: 1 MKACDFGVPQRRERLYIID 19 + + DFGVPQ RER++I Sbjct: 148 LNSKDFGVPQNRERVFITA 166 >gi|127420|sp|P19888|MTBA_BACAR RecName: Full=Modification methylase BanI; Short=M.BanI; AltName: Full=Cytosine-specific methyltransferase BanI gi|216242|dbj|BAA00613.1| BanI modification methylase [Aneurinibacillus aneurinilyticus] Length = 428 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 17/75 (22%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT-----------------PLGIKPRLGDIL 43 + + FGVPQ R R+YI+ L + + + DIL Sbjct: 147 LNSSTFGVPQNRVRIYILGILGSKPKLTLTSNVGAADSHKYKNEQISLFDESYATVKDIL 206 Query: 44 EEHIDDKSTISNKLW 58 E+ +K S++ Sbjct: 207 EDSPSEKYRCSDEFI 221 >gi|284050345|ref|ZP_06380555.1| DNA (cytosine-5-)-methyltransferase [Arthrospira platensis str. Paraca] Length = 429 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 17/29 (58%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF 29 + + ++GVPQ R R Y++ LN + F Sbjct: 148 LNSSNYGVPQNRVRAYMMGVLNQTPHFNL 176 >gi|305665822|ref|YP_003862109.1| DNA (cytosine-5-)-methyltransferase [Maribacter sp. HTCC2170] gi|88710593|gb|EAR02825.1| DNA (cytosine-5-)-methyltransferase [Maribacter sp. HTCC2170] Length = 408 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 21/42 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 + A D+G+PQRR R++ I + + +K L DI Sbjct: 160 INAADYGMPQRRRRIFFIAYHKSTAIYKKLKKADSSQWLNDI 201 >gi|291569071|dbj|BAI91343.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39] Length = 429 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 17/29 (58%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF 29 + + ++GVPQ R R Y++ LN + F Sbjct: 148 LNSSNYGVPQNRVRAYMMGVLNQTPHFNL 176 >gi|239624728|ref|ZP_04667759.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium 1_7_47_FAA] gi|239521114|gb|EEQ60980.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium 1_7_47FAA] Length = 554 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 5/93 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPL---GIKPRLGDILEEHIDDKSTISNK 56 + A +G PQRRER I+ ++ P G + D + I D ++++ Sbjct: 342 LNAIHYGAPQRRERFIIVGLKKEMDAKYTAPEIKFTEGNYRTVHDAI-ADIQDITSVTEV 400 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNT 89 + + N + G N TT T Sbjct: 401 TGDYIELEAHPNATGLEKELRGRALYNHITTAT 433 >gi|323650463|gb|ADX97312.1| M.FspI [Fischerella muscicola SAG 1427-1] Length = 385 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A +G+PQ R R + I L+ FP P GDI ++ KS L E Sbjct: 155 LNAAHYGIPQTRSRAFFIASLDHY--LHFPKPTH----FGDIRSDYRTRKSCNQLNLLET 208 >gi|328885641|emb|CCA58880.1| DNA methylase [Streptomyces venezuelae ATCC 10712] Length = 426 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKS 51 + + D+GVPQ R+R ++ + E P P + + L ++ Sbjct: 172 LNSADYGVPQTRKRAILLASRVRTAEP--PPPTHARFAEPETLFGPGRERW 220 >gi|126657178|ref|ZP_01728344.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. CCY0110] gi|126621449|gb|EAZ92160.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. CCY0110] Length = 433 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP-LGIKPRLGDILEEHIDDKSTISN 55 + A ++GVPQ RERL+++ + +P + L + K I + Sbjct: 157 LNAANYGVPQLRERLFLLGAKQGLILPNYPNFVTQYNQQDNLFLPTTPNVKDAIQD 212 >gi|76788592|ref|YP_329366.1| prophage LambdaSa04, methyltransferase C-5 [Streptococcus agalactiae A909] gi|76563649|gb|ABA46233.1| prophage LambdaSa04, methyltransferase, C-5 cytosine-specific family [Streptococcus agalactiae A909] Length = 417 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 30/97 (30%), Gaps = 4/97 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + D+GVPQ RER+Y + L + P L ++ + + + Sbjct: 151 NSKDYGVPQNRERIYTLGHLRSRGRRQVLPLSGESGSHLKQLIGGMQSYRVYDPSGIATT 210 Query: 61 HQKRKENNKIAGKGF--GYGLFFEN-SATTNTLSARY 94 + L + ++ARY Sbjct: 211 LVGEGGGLGAKTGLYLIDQSLTEPKLTDEARCITARY 247 >gi|291530602|emb|CBK96187.1| DNA-methyltransferase (dcm) [Eubacterium siraeum 70/3] Length = 369 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 3/96 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + FGVPQ+R RLYI+ +L+P FP L ++ + ++ + Sbjct: 147 LNSKYFGVPQQRRRLYIVGYLDPRCAGKVFPLSGCNAKNLKQLIPGPQGQRVYETDGIAC 206 Query: 60 GHQKRKENNKIAGKGFGYGLFFEN--SATTNTLSAR 93 + + + + ++AR Sbjct: 207 TQCAGSGGWGGKTGLYFIDMNADPVITDVARCITAR 242 >gi|332710686|ref|ZP_08430629.1| DNA-methyltransferase [Lyngbya majuscula 3L] gi|332350562|gb|EGJ30159.1| DNA-methyltransferase [Lyngbya majuscula 3L] Length = 450 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 18/31 (58%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT 31 + A DFGVPQ+R RL+++ +P+ Sbjct: 179 LNAADFGVPQKRRRLFLLGSRLGEAPVAYPS 209 >gi|313575370|emb|CBR26899.1| hypothetical protein [Streptococcus phage phi-SsUD.1] Length = 419 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 31/97 (31%), Gaps = 4/97 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + D+GVPQ RER+Y + L + K P L ++ + + + Sbjct: 151 NSKDYGVPQNRERIYTLGHLRIRGQRKVLPISGESGSHLKQLVGGMQSYRVYDPSGIATT 210 Query: 61 HQKRKENNKIAGKGF--GYGLFFEN-SATTNTLSARY 94 + L + ++ARY Sbjct: 211 LVGEGGGLGAKTGLYLIDQSLTEPKLTDEARCITARY 247 >gi|328948822|ref|YP_004366159.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] gi|328449146|gb|AEB14862.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] Length = 437 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 15/28 (53%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK 28 + A +FGVPQ R+R+YI + Sbjct: 161 LNAKNFGVPQDRKRIYITGTYTDFPNLE 188 >gi|284050655|ref|ZP_06380865.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca] gi|79835464|gb|ABB52092.1| Mod [Arthrospira platensis] Length = 406 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 25/88 (28%), Gaps = 4/88 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTP---LGIKPRLGDILEEHIDDKSTISNKL 57 D+GVPQ RER+ I+ + F P P + D + N Sbjct: 160 NFADYGVPQYRERVLIVGVRMDTGFNFIHPFPEYGSDRLYPYRTAKQALKDVEKVTDNNE 219 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSA 85 + R K G + Sbjct: 220 HQRIHPRTVEIIKRIKPGGNYTDIPKDS 247 >gi|254252470|ref|ZP_04945788.1| Site-specific DNA methylase [Burkholderia dolosa AUO158] gi|124895079|gb|EAY68959.1| Site-specific DNA methylase [Burkholderia dolosa AUO158] Length = 669 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 ++ACD+G P R+RL+II + +PTP P+ +L Sbjct: 208 LRACDYGAPTIRKRLFIIARRDGLP-IVWPTPTHGDPKSAAVL 249 >gi|291568714|dbj|BAI90986.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39] Length = 406 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 25/88 (28%), Gaps = 4/88 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPS-VEFKFPTP---LGIKPRLGDILEEHIDDKSTISNKL 57 D+GVPQ RER+ I+ + F P P + D + N Sbjct: 160 NFADYGVPQYRERVLIVGVRMDTGFNFIHPFPEYGSDRLYPYRTAKQALKDVEKVTDNNE 219 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSA 85 + R K G + Sbjct: 220 HQRIHPRTVEIIKRIKPGGNYTDIPKDS 247 >gi|229547357|ref|ZP_04436082.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX1322] gi|256854885|ref|ZP_05560249.1| predicted protein [Enterococcus faecalis T8] gi|307292237|ref|ZP_07572101.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0411] gi|229307506|gb|EEN73493.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX1322] gi|256710445|gb|EEU25489.1| predicted protein [Enterococcus faecalis T8] gi|306496743|gb|EFM66296.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0411] gi|315028686|gb|EFT40618.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX4000] Length = 391 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 33/93 (35%), Gaps = 6/93 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL--EEHIDDKSTISNKLW 58 + A DFGVPQ R R +++ N +E + + + L + K I Sbjct: 218 LNALDFGVPQSRSRTFMLSIRNKDIEPE--EISNLNYNIQSNLGDYLRFNHKEEIIEATP 275 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 R + G+ + TNT+S Sbjct: 276 NYTPSRIKIYNQNRLLAKNGVVKAD--FTNTIS 306 >gi|182677759|ref|YP_001831905.1| DNA-cytosine methyltransferase [Beijerinckia indica subsp. indica ATCC 9039] gi|182633642|gb|ACB94416.1| DNA-cytosine methyltransferase [Beijerinckia indica subsp. indica ATCC 9039] Length = 488 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 4/38 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEF----KFPTPLG 34 + A +GVPQ R R+ ++ + P P Sbjct: 209 LNAAHYGVPQERFRVVVVGTRKDVADRAGVVSLPIPHH 246 >gi|300861667|ref|ZP_07107751.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TUSoD Ef11] gi|300849128|gb|EFK76881.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TUSoD Ef11] Length = 385 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 33/93 (35%), Gaps = 6/93 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL--EEHIDDKSTISNKLW 58 + A DFGVPQ R R +++ N +E + + + L + K I Sbjct: 212 LNALDFGVPQSRSRTFMLSIRNKDIEPE--EISNLNYNIQSNLGDYLRFNHKEEIIEATP 269 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 R + G+ + TNT+S Sbjct: 270 NYTPSRIKIYNQNRLLAKNGVVKAD--FTNTIS 300 >gi|224437470|ref|ZP_03658432.1| site-specific DNA-methyltransferase [Helicobacter cinaedi CCUG 18818] Length = 418 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 36/103 (34%), Gaps = 4/103 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A +G +RERL I+ +F +P P +G L+ D+ K + Sbjct: 215 LNAAWYGAATKRERLIIVATRADLKGDFSYPLPRFYDESIGTKLDFSDDE--LAKCKFKK 272 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSA-RYYKDGSEI 101 R+ KI T+ +Y K+G I Sbjct: 273 PLTLREVLAKIDYTNEKDIDNLPMQHNAKTIERFKYIKEGCNI 315 >gi|222149028|ref|YP_002549985.1| DNA methylase [Agrobacterium vitis S4] gi|221736013|gb|ACM36976.1| DNA methylase [Agrobacterium vitis S4] Length = 492 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLG 34 + + +GVPQ RERL++I + + V FP P Sbjct: 188 LNSAFYGVPQMRERLFLIAYDRSLGVTPTFPHPSH 222 >gi|34451612|gb|AAQ72361.1| BsaWI methylase [Geobacillus stearothermophilus] Length = 411 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 25/74 (33%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFGVPQ RER +I+ + + + ++ N + Sbjct: 160 LNAEDFGVPQSRERFFILASREKLDLRVPVAKNRKIVTVEEAFIDLPEEPKETINSAKKK 219 Query: 61 HQKRKENNKIAGKG 74 + +E K Sbjct: 220 LENGEEIEVEQYKD 233 >gi|317504402|ref|ZP_07962385.1| modification methylase Sau3AI [Prevotella salivae DSM 15606] gi|315664482|gb|EFV04166.1| modification methylase Sau3AI [Prevotella salivae DSM 15606] Length = 579 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 5/89 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A ++G+PQRR R+YII + S I+ IL + + K+ + + Sbjct: 167 INAAEYGMPQRRRRIYIIGYYKGST-----IEKKIEDFKNWILFDGVMAKAFPLEQKNKS 221 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNT 89 K I + + +NS NT Sbjct: 222 GSSFKIEGTIKEVSDNFNVKQKNSPFGNT 250 >gi|108763142|ref|YP_631786.1| DNA-cytosine methyltransferase [Myxococcus xanthus DK 1622] gi|108467022|gb|ABF92207.1| DNA-cytosine methyltransferase [Myxococcus xanthus DK 1622] Length = 505 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 1/36 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGI 35 + A + VPQ RER +++ + + FP P Sbjct: 187 LNAASYDVPQMRERFFLVAVHKETRSDPSFPVPTRK 222 >gi|187736717|ref|YP_001840974.1| hypothetical protein pEspB_p20 [Exiguobacterium arabatum] gi|183223750|emb|CAQ35235.1| m5C DNA methyltransferase M.Lsp1109I [Exiguobacterium arabatum] Length = 377 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 7/61 (11%) Query: 6 FGVPQRRERLYIIDFLNPS----VEFKFPTPLG---IKPRLGDILEEHIDDKSTISNKLW 58 +GVPQ R R+ I+ +EFK P PL + + + ++N+L Sbjct: 168 YGVPQARHRIIIVGIRKDLAEQGIEFKVPAPLNTLDNVKTASEAILNPPIPEDAMNNELT 227 Query: 59 E 59 + Sbjct: 228 K 228 >gi|240142441|ref|YP_002966951.1| Site-specific DNA-methyltransferase [Methylobacterium extorquens AM1] gi|240012385|gb|ACS43610.1| Site-specific DNA-methyltransferase [Methylobacterium extorquens AM1] Length = 463 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 1/48 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHI 47 M A +GVPQ R+R +++ + VE FP P L Sbjct: 168 MNAVHYGVPQMRDRAFLLAYRQDLGVEPVFPEPTRAHDLPKGYLHSRH 215 >gi|212526390|ref|XP_002143352.1| C-5 cytosine methyltransferase DmtA [Penicillium marneffei ATCC 18224] gi|210072750|gb|EEA26837.1| C-5 cytosine methyltransferase DmtA [Penicillium marneffei ATCC 18224] Length = 604 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 12/100 (12%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQK 63 +GVPQ R RL+II FPTP G L ++ K ISN Sbjct: 447 AQYGVPQMRRRLFIIAAGPGERLPTFPTPTH-----GPDLLPYVTIKDAISN--IPRLAD 499 Query: 64 RKENNKIAGKGFGYGLFFENSATTNTLSAR-----YYKDG 98 + +A + ++ + T++ Y+ G Sbjct: 500 NHGPDNVAFQDGRTRAPYDENTLAKTITCGGGDGNYHPSG 539 >gi|152974572|ref|YP_001374089.1| DNA-cytosine methyltransferase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023324|gb|ABS21094.1| DNA-cytosine methyltransferase [Bacillus cytotoxicus NVH 391-98] Length = 371 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Query: 5 DFGVPQRRERLYIIDFLNP-SVEFKFPTPLG 34 ++GVPQ R R+ I+ N +VE++ P P Sbjct: 166 EYGVPQARHRIIIVGIRNDMNVEYRVPAPTH 196 >gi|299769738|ref|YP_003731764.1| C-5 cytosine-specific DNA methylase [Acinetobacter sp. DR1] gi|298699826|gb|ADI90391.1| C-5 cytosine-specific DNA methylase [Acinetobacter sp. DR1] Length = 492 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG 40 MKACD+G P R R +++ ++ ++P P P+ Sbjct: 171 MKACDYGSPTIRRRFFMVA-RRDNLAIEWPKPTHADPKSK 209 >gi|12230342|sp|Q27746|DNMT1_PARLI RecName: Full=DNA (cytosine-5)-methyltransferase PliMCI; AltName: Full=DNA methyltransferase PliMCI; Short=DNA MTase PliMCI; Short=M.PliMCI; AltName: Full=Dnmt1; AltName: Full=MCMT gi|1004286|emb|CAA90563.1| DNA (cytosine-5-)-methyltransferase [Paracentrotus lividus] Length = 1612 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 24/58 (41%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 ++A +GVPQ R R I+ +P PL + L I +K SN W Sbjct: 1291 LQAGQYGVPQTRRRAIILAAAPGEKLPFYPEPLHVFSSRACSLSVMIGEKKIESNNQW 1348 >gi|218439218|ref|YP_002377547.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] gi|218171946|gb|ACK70679.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] Length = 323 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRL 39 D+G PQ RER+ II S ++ P P Sbjct: 147 NFADYGTPQLRERVLIIGIRQDISYQYIKPKPTHTPENY 185 >gi|312901967|ref|ZP_07761229.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0470] gi|311290903|gb|EFQ69459.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0470] Length = 412 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-----SVEF-KFPTPLGIKPRLGDILEEHIDDKSTIS 54 + + ++ VPQ+RERL+I ++ F + T GI ++ D+ + + KS Sbjct: 194 INSAEYEVPQKRERLFIFGIRKDLKISANIFFQELATEKGIGIKIKDLFNDLPEMKSGEE 253 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENSATTN 88 + ++ + + K L + S N Sbjct: 254 KNYYSKYKAPSKFVRENLKNNDTALTYNVSRFNN 287 >gi|196048067|ref|ZP_03115245.1| DNA-cytosine methyltransferase [Bacillus cereus 03BB108] gi|196021323|gb|EDX60052.1| DNA-cytosine methyltransferase [Bacillus cereus 03BB108] Length = 427 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 29/70 (41%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 M+A D+GVPQ RER+ +I + F L L DIL+ + ++ Sbjct: 158 MQAHDYGVPQLRERIIVIGTESTCDPFPLIPKLKGPRVLSDILKNCPTSEYFSFRNEYKD 217 Query: 61 HQKRKENNKI 70 + + + Sbjct: 218 AMQYIKPGQC 227 >gi|116748761|ref|YP_845448.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB] gi|116697825|gb|ABK17013.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB] Length = 429 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 15/105 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-------IKPRLGDILEEHIDDKSTI 53 + A ++GVPQ RER++++ ++ + F+ P + D + + + Sbjct: 185 LNAVNYGVPQSRERVFLLASIDGT-TFQIPPVTHGCGDRLEPRVTAWDAIGDLDSPEWPS 243 Query: 54 S---NKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYY 95 W G K K G T RY+ Sbjct: 244 ELEPAGKWAGLLKSIPEGKNYLWHTKRGGGAPLFG-WRT---RYW 284 >gi|224613538|gb|ACN60348.1| DNA [Salmo salar] Length = 466 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ ++P PL + L +DDK SN Sbjct: 138 LQAGQYGVAQTRRRAIILAAAPGEKLPRYPEPLHVFAPRACSLNVVVDDKKYFSN 192 >gi|319757808|gb|ADV69750.1| hypothetical protein SSUJS14_0659 [Streptococcus suis JS14] Length = 424 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 27/97 (27%), Gaps = 4/97 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 + D+GVPQ RER+Y + L K G L + Sbjct: 151 NSKDYGVPQNRERIYTLGHLRSRGRRKVLPISGESGSHLKQLVGGMQSYRVYDPSGIATT 210 Query: 62 QKRK---ENNKIAGKGFGYGLFFEN-SATTNTLSARY 94 + K L + ++ARY Sbjct: 211 IVGEGGGLGAKTGLYLIDQSLTEPKLTDEARCITARY 247 >gi|68249825|ref|YP_248937.1| modification methylase BepI-like [Haemophilus influenzae 86-028NP] gi|68058024|gb|AAX88277.1| modification methylase BepI-like [Haemophilus influenzae 86-028NP] gi|309973261|gb|ADO96462.1| DNA (cytosine-5-)-methyltransferase [Haemophilus influenzae R2846] Length = 407 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 31/112 (27%), Gaps = 27/112 (24%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK----------------FPTPLG------IKPR 38 + A +GVPQ RER+ F ++ K +P P Sbjct: 205 LNAQFYGVPQSRERVIFFGFKKNALNKKALEELQKENIAEDYNPYPPPTHGKENLKAVVT 264 Query: 39 LGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTL 90 D + + + + + G + + ++ T+ Sbjct: 265 CTDAFINLQEPNFSKDPSQQKYSKAKY-----MGNHCQGQVEIKLNSVGPTI 311 >gi|313905794|ref|ZP_07839153.1| DNA-cytosine methyltransferase [Eubacterium cellulosolvens 6] gi|313469400|gb|EFR64743.1| DNA-cytosine methyltransferase [Eubacterium cellulosolvens 6] Length = 427 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 34/111 (30%), Gaps = 16/111 (14%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR--LGDILEEHI--------DDKS 51 A FGV Q R R+ I+ + + + +P + D+L + D Sbjct: 207 NARTFGVLQNRRRMIIVGWKKGT-NYSYPEFQDKTSDAIVEDLLNDLPKLVPGAGKDVSE 265 Query: 52 TISNKLWEGHQKRKENNKIAGKGFGYGLFFENSA---TTNTLSARYYKDGS 99 S + + + K + ++ + A + DG Sbjct: 266 YRSGEYSDYLKTMKLRSDDDVLTLHKARPNKDRDIEIYKRAIEA--WDDGK 314 >gi|294084926|ref|YP_003551686.1| DNA-cytosine methyltransferase [Candidatus Puniceispirillum marinum IMCC1322] gi|292664501|gb|ADE39602.1| DNA-cytosine methyltransferase [Candidatus Puniceispirillum marinum IMCC1322] Length = 393 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 16/23 (69%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 +KA +GVPQRRER+++I Sbjct: 197 LKAHHYGVPQRRERMFVIGVRKD 219 >gi|312794286|ref|YP_004027209.1| DNA-cytosine methyltransferase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181426|gb|ADQ41596.1| DNA-cytosine methyltransferase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 419 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG 40 + + DF V Q R+R+ ++ + S FK+P I+ Sbjct: 202 LNSADFLVLQNRKRVILMGWKKGS-NFKYPEFKKIEHNYK 240 >gi|115972577|ref|XP_001178888.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase isoform 1 [Strongylocentrotus purpuratus] Length = 1470 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 24/58 (41%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 ++A +GVPQ R R I+ +P PL + L I DK SN W Sbjct: 1149 LQAGQYGVPQTRRRAIILAAAPGEKLPFYPEPLHVFSPRACSLSVMIGDKKIQSNNQW 1206 >gi|186684463|ref|YP_001867659.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102] gi|14594706|gb|AAK68641.1| cytosine-specific DNA methyltransferase [Nostoc punctiforme PCC 73102] gi|186466915|gb|ACC82716.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102] Length = 413 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 18/26 (69%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A ++GVPQ RER+ +I F N ++ Sbjct: 172 INAIEYGVPQDRERIILIGFRNNFIK 197 >gi|119503900|ref|ZP_01625982.1| putative cytosine-specific methyltransferase [marine gamma proteobacterium HTCC2080] gi|119460408|gb|EAW41501.1| putative cytosine-specific methyltransferase [marine gamma proteobacterium HTCC2080] Length = 463 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 23/70 (32%) Query: 3 ACDFGVPQRRERLYIIDFLNP----------------------SVEFKF-PTPLGIKPRL 39 A D+GVPQ R R+ ++ N +V++ F P P P Sbjct: 207 AKDYGVPQNRPRVLLVGIRNDAMMSDLEKLQPIVEAQAYDIGAAVKWGFLPEPTKDYPDP 266 Query: 40 GDILEEHIDD 49 +L + +DD Sbjct: 267 KILLGDLVDD 276 >gi|120602087|ref|YP_966487.1| C-5 cytosine-specific DNA methylase [Desulfovibrio vulgaris DP4] gi|120562316|gb|ABM28060.1| C-5 cytosine-specific DNA methylase [Desulfovibrio vulgaris DP4] Length = 659 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 ++ACD+G P R+RL++I + +P P P +L Sbjct: 176 LRACDYGTPTIRKRLFLIA-RRDKLPIVWPEPTHGAPGSPKVL 217 >gi|306829493|ref|ZP_07462683.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis ATCC 6249] gi|304428579|gb|EFM31669.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis ATCC 6249] Length = 450 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 3 ACDFGVPQRRER-LYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 A ++GV Q RER +Y++ ++ +++++FP P + D + + +++ Sbjct: 225 AKNYGVAQSRERCVYLLSRIDTNIQWEFPEPSTKIVTMRDAIGDLPSLDPDVTD 278 >gi|72091983|ref|XP_780273.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase isoform 1 [Strongylocentrotus purpuratus] gi|115972575|ref|XP_001178953.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase isoform 2 [Strongylocentrotus purpuratus] Length = 1618 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 24/58 (41%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 ++A +GVPQ R R I+ +P PL + L I DK SN W Sbjct: 1297 LQAGQYGVPQTRRRAIILAAAPGEKLPFYPEPLHVFSPRACSLSVMIGDKKIQSNNQW 1354 >gi|189233760|ref|XP_001814230.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase [Tribolium castaneum] Length = 1187 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 30/84 (35%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQ 62 A +FGVPQ R R +I + P P + + G L+ ++D + W Sbjct: 891 AGEFGVPQARRRFILIASAPGYQLPRIPEPQHVFLQRGSRLDIYVDGVKYTNGNFWTQSA 950 Query: 63 KRKENNKIAGKGFGYGLFFENSAT 86 + + + +++ Sbjct: 951 PYRMLHVRDAIADLPAIEHDDNRP 974 >gi|163759244|ref|ZP_02166330.1| C-5 cytosine-specific DNA methylase [Hoeflea phototrophica DFL-43] gi|162283648|gb|EDQ33933.1| C-5 cytosine-specific DNA methylase [Hoeflea phototrophica DFL-43] Length = 755 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 ++ACD+G P R+R++II + +P P KP ++ Sbjct: 170 LRACDYGAPTIRKRVFII-IRFDGKKIVWPEPSHGKPDSDEV 210 >gi|153872654|ref|ZP_02001483.1| DNA methylase [Beggiatoa sp. PS] gi|152070879|gb|EDN68516.1| DNA methylase [Beggiatoa sp. PS] Length = 259 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 14/22 (63%) Query: 1 MKACDFGVPQRRERLYIIDFLN 22 + A FG+PQ RER+ II + Sbjct: 26 LNAKHFGLPQNRERIIIIGSKH 47 >gi|15678523|ref|NP_275638.1| modification methyltransferase, cytosine-specific [Methanothermobacter thermautotrophicus str. Delta H] gi|2621566|gb|AAB85001.1| modification methyltransferase, cytosine-specific [Methanothermobacter thermautotrophicus str. Delta H] Length = 413 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 34/102 (33%), Gaps = 12/102 (11%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL-----------EEHIDDK 50 A +FGVPQRR R+ +I +F + DIL + + Sbjct: 196 DAYNFGVPQRRRRIIVIGHRMEDKRIQFDEERYAG-TVNDILCDLPALEPGQGTDGPQEY 254 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + ++L R EN+ + + T+ A Sbjct: 255 RSRPSRLLNEMGIRTENDILRHHQARRHNPRDREIYRRTIDA 296 >gi|298206640|ref|YP_003714819.1| site-specific DNA-methyltransferase [Croceibacter atlanticus HTCC2559] gi|83849270|gb|EAP87138.1| site-specific DNA-methyltransferase [Croceibacter atlanticus HTCC2559] Length = 735 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 12/24 (50%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV 25 A ++GVPQ RER+ I Sbjct: 470 NASNYGVPQNRERVLFIGCRKDQK 493 >gi|317126940|ref|YP_004093222.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] gi|315471888|gb|ADU28491.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] Length = 382 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 4/55 (7%) Query: 5 DFGVPQRRERLYIIDFLNPS----VEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++GVPQ R R+ I+ N +EFK P P + + I + + Sbjct: 167 EYGVPQARHRIIIVGIRNDLAKEGIEFKVPAPTTLASTEYKTSRQAILEPPIPED 221 >gi|149373121|ref|ZP_01892009.1| site-specific DNA-methyltransferase [unidentified eubacterium SCB49] gi|149354269|gb|EDM42838.1| site-specific DNA-methyltransferase [unidentified eubacterium SCB49] Length = 735 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 12/24 (50%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV 25 A ++GVPQ RER+ I Sbjct: 470 NASNYGVPQNRERVLFIGCRKDQK 493 >gi|144575557|gb|AAZ53977.2| cytosine specific DNA methyltransferase [Mycoplasma hyopneumoniae 7448] Length = 339 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 5/89 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP---LGIKPRLGDILEEHID-DKSTISNK 56 + + DFGV Q R+R+ I F FP LG +E++++ +++ N Sbjct: 168 LNSADFGVAQIRKRVIFIANRIGLTNF-FPAAILSPENYKTLGQCIEKYMNWEENIEINH 226 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSA 85 ++ H + + + Sbjct: 227 IFTKHSAKMREKILKTSEGQSVYKNYSDG 255 >gi|294084868|ref|YP_003551628.1| DNA-cytosine methyltransferase [Candidatus Puniceispirillum marinum IMCC1322] gi|292664443|gb|ADE39544.1| DNA-cytosine methyltransferase [Candidatus Puniceispirillum marinum IMCC1322] Length = 538 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 10/67 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT---PLGIKPRLGDILEEHID-----DKST 52 +K+ DFG+PQ R RL I+ + P P + D + + K Sbjct: 255 LKSEDFGIPQTRHRLIIVGIREDIQKI--PDSLVPNEKTYTVQDAISDLPRLRSGLSKEK 312 Query: 53 ISNKLWE 59 KLW+ Sbjct: 313 DDAKLWK 319 >gi|167725800|ref|ZP_02409036.1| putative cytosine-specific modification methylase [Burkholderia pseudomallei DM98] Length = 661 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 ++ACD+G P R+RL+++ + +PTP P+ Sbjct: 208 LRACDYGTPTIRKRLFVVG-RRDHLPIVWPTPTHGDPK 244 >gi|163716644|gb|ABY40554.1| putative site-specific DNA methylase [Burkholderia phage Bups phi1] Length = 334 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 ++ACD+G P R+RL+++ + +PTP P+ Sbjct: 208 LRACDYGTPTIRKRLFVVG-RRDHLPIVWPTPTHGDPK 244 >gi|254191931|ref|ZP_04898431.1| DNA cytosine methyltransferase [Burkholderia pseudomallei Pasteur 52237] gi|157987753|gb|EDO95518.1| DNA cytosine methyltransferase [Burkholderia pseudomallei Pasteur 52237] Length = 661 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 ++ACD+G P R+RL+++ + +PTP P+ Sbjct: 208 LRACDYGTPTIRKRLFVVG-RRDHLPIVWPTPTHGDPK 244 >gi|49117032|gb|AAH72774.1| Dnmt1 protein [Xenopus laevis] Length = 1490 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +D+K +SN Sbjct: 1174 LQAGQYGVAQTRRRAIILAAAPGEKLPMFPEPLHVFAPRACTLSVVVDEKKYVSN 1228 >gi|116514211|ref|YP_813117.1| site-specific DNA methylase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093526|gb|ABJ58679.1| Site-specific DNA methylase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 380 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 4/39 (10%) Query: 6 FGVPQRRERLYIIDFLNPS----VEFKFPTPLGIKPRLG 40 +GVPQ R R+ I+ N ++F P P P Sbjct: 167 YGVPQMRHRIIIVGIRNDLAERGIKFHVPAPTTPNPSDY 205 >gi|262113733|emb|CAR95400.1| hypothetical protein [Streptococcus phage phi-m46.1] Length = 417 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 30/97 (30%), Gaps = 4/97 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + D+GVPQ RER+Y + L K P L ++ + + + Sbjct: 151 NSKDYGVPQNRERIYTLGHLRSRGRRKVLPISGESGSHLKQLVGGMQSYRVYDPSGIATT 210 Query: 61 HQKRKENNKIAGKGF--GYGLFFEN-SATTNTLSARY 94 + L + ++ARY Sbjct: 211 LVGEGGGLGAKTGLYLIDQSLTEPKLTDEARCITARY 247 >gi|256958119|ref|ZP_05562290.1| C5 methyltransferase alpha subunit [Enterococcus faecalis DS5] gi|256948615|gb|EEU65247.1| C5 methyltransferase alpha subunit [Enterococcus faecalis DS5] Length = 298 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKP 37 + + D+ VPQ RER++II FP + Sbjct: 147 LNSKDY-VPQNRERVFIIGHLRGERTRKVFPFKKNDRT 183 >gi|331003101|ref|ZP_08326612.1| hypothetical protein HMPREF0491_01474 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412985|gb|EGG92361.1| hypothetical protein HMPREF0491_01474 [Lachnospiraceae oral taxon 107 str. F0167] Length = 356 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 4/40 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF----PTPLGIK 36 + D+GVPQ R+RL + +++ F P K Sbjct: 152 LNTADYGVPQVRKRLVLHGIKKENIDRNFKIQLPPKTHSK 191 >gi|315035876|gb|EFT47808.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0027] Length = 298 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKP 37 + + D+ VPQ RER++II FP + Sbjct: 147 LNSKDY-VPQNRERVFIIGHLRGERTRKVFPFKKNDRT 183 >gi|270015149|gb|EFA11597.1| DNA methyltransferase 1 [Tribolium castaneum] Length = 1882 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 30/84 (35%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQ 62 A +FGVPQ R R +I + P P + + G L+ ++D + W Sbjct: 909 AGEFGVPQARRRFILIASAPGYQLPRIPEPQHVFLQRGSRLDIYVDGVKYTNGNFWTQSA 968 Query: 63 KRKENNKIAGKGFGYGLFFENSAT 86 + + + +++ Sbjct: 969 PYRMLHVRDAIADLPAIEHDDNRP 992 >gi|297159178|gb|ADI08890.1| DNA-cytosine methyltransferase [Streptomyces bingchenggensis BCW-1] Length = 386 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 34/101 (33%), Gaps = 15/101 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLG-IKPRLGDILEEHIDDKSTIS-NKL 57 ++ACD+GVPQ R R ++ + F++ P + L + + S + Sbjct: 163 LEACDYGVPQLRPRAILVAMREEYAQHFQWTDPEEGALVTVAQALAPSMRKRFEDSGDPR 222 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 WE +R G TL K G Sbjct: 223 WEIFYERWLKEAEKGT------------VAPTLVGGSKKHG 251 >gi|206579328|ref|YP_002239202.1| DNA-cytosine methyltransferase [Klebsiella pneumoniae 342] gi|206568386|gb|ACI10162.1| DNA-cytosine methyltransferase [Klebsiella pneumoniae 342] Length = 347 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 16/118 (13%), Positives = 31/118 (26%), Gaps = 28/118 (23%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFK----------------FPTPLGIKPRLGDILEE 45 D+G+PQ R RL +I + F P + D L Sbjct: 150 NCSDYGLPQNRRRLILIGSRLGPISFDQEKKDRKTTVKDAIGMLPKVEAGQKLATDALHC 209 Query: 46 HIDDKSTISNKLWEGH---------QKRKENNKIAGKGFGYGLFFEN---SATTNTLS 91 + ++ ++ + G Y + T+ T++ Sbjct: 210 SPKLRELNLKRIMHSLPGGTWDDWPEEIRAECHKKDSGMTYKSVYGRMIWDDTSPTIT 267 >gi|313143922|ref|ZP_07806115.1| cytosine specific DNA methyltransferase [Helicobacter cinaedi CCUG 18818] gi|313128953|gb|EFR46570.1| cytosine specific DNA methyltransferase [Helicobacter cinaedi CCUG 18818] Length = 294 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 36/103 (34%), Gaps = 4/103 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A +G +RERL I+ +F +P P +G L+ D+ K + Sbjct: 91 LNAAWYGAATKRERLIIVATRADLKGDFSYPLPRFYDESIGTKLDFSDDE--LAKCKFKK 148 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSA-RYYKDGSEI 101 R+ KI T+ +Y K+G I Sbjct: 149 PLTLREVLAKIDYTNEKDIDNLPMQHNAKTIERFKYIKEGCNI 191 >gi|298373723|ref|ZP_06983712.1| modification methylase EcoRII [Bacteroidetes oral taxon 274 str. F0058] gi|298274775|gb|EFI16327.1| modification methylase EcoRII [Bacteroidetes oral taxon 274 str. F0058] Length = 457 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 9/84 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS---VEFKFPTPLGIKPRLGDILEEH------IDDKS 51 + F +PQ R R+YI+ F FPTP K + I++E+ I + Sbjct: 156 LSPHQFSIPQHRRRIYIVCVDKNKRSLEGFSFPTPTKNKCEISKIIDENDTNIVKIKSDT 215 Query: 52 TISNKLWEGHQKRKENNKIAGKGF 75 ++W+ + F Sbjct: 216 RHKLEVWQEFLDLTIAHGDTIPHF 239 >gi|291529734|emb|CBK95320.1| DNA-methyltransferase (dcm) [Eubacterium rectale M104/1] Length = 339 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 3/89 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A D+G+ Q R RLY I L + +F FP+ + + + L+ + + + Sbjct: 157 LDASDYGIAQSRPRLYTISILKTELAGRKFTFPSQVPLTKDIRYYLDVNAAPAPLSAAQQ 216 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSAT 86 + + GY + Sbjct: 217 SLFFTQNNQLCVREATKLGYKPVNDYDVV 245 >gi|313667095|gb|ADR72992.1| M2.BspMI [Bacillus sp. M(2010)] Length = 353 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 10/69 (14%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG---------IKPRLGDILEEHIDDKSTI 53 A DFGVPQ+R R+++I FP+P +GD + + + Sbjct: 161 AADFGVPQQRYRMFMIGNRVGKPV-NFPSPSHYPEDSLFLPKYTTVGDAIMDLELLGPEV 219 Query: 54 SNKLWEGHQ 62 SN + H+ Sbjct: 220 SNHVPLYHK 228 >gi|300867442|ref|ZP_07112096.1| Modification methylase MthTI [Oscillatoria sp. PCC 6506] gi|300334557|emb|CBN57264.1| Modification methylase MthTI [Oscillatoria sp. PCC 6506] Length = 350 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 20/52 (38%), Gaps = 3/52 (5%) Query: 1 MKACDFGVPQRRERLYIIDF---LNPSVEFKFPTPLGIKPRLGDILEEHIDD 49 + A + VPQ R+R+ + + L F + L D + + + Sbjct: 149 LNAMYYNVPQDRKRVIFVGYHLSLKRRFNFDWVGKSRRILTLKDAIGDLQES 200 >gi|257419811|ref|ZP_05596805.1| site-specific DNA methylase [Enterococcus faecalis T11] gi|257161639|gb|EEU91599.1| site-specific DNA methylase [Enterococcus faecalis T11] Length = 380 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 4/36 (11%) Query: 6 FGVPQRRERLYIIDFLNPS----VEFKFPTPLGIKP 37 +GVPQ R R+ I+ N +EFK P P P Sbjct: 167 YGVPQARHRIIIVGIRNDIAEQGIEFKVPAPTTPNP 202 >gi|34014717|dbj|BAC81824.1| methylase [Acidocella facilis] Length = 443 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 17/35 (48%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A +FG PQ+R+RL + V +P P Sbjct: 154 LDASNFGTPQKRQRLILFGAKKGLVLPDYPAPTTN 188 >gi|57242036|ref|ZP_00369976.1| cytosine specific DNA methyltransferase (DDEM) [Campylobacter upsaliensis RM3195] gi|57017228|gb|EAL54009.1| cytosine specific DNA methyltransferase (DDEM) [Campylobacter upsaliensis RM3195] Length = 294 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 36/103 (34%), Gaps = 4/103 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A +G +RERL I+ +F +P P +G L+ D+ K + Sbjct: 91 LNAAWYGAATKRERLIIVATRADLKGDFSYPLPRFYDESIGTKLDFSDDE--LAKCKFKK 148 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSA-RYYKDGSEI 101 R+ KI T+ +Y K+G I Sbjct: 149 PLTLREVLGKIDYTDENDIDNLPMQHNAKTIERFKYIKEGCNI 191 >gi|326776070|ref|ZP_08235335.1| DNA-cytosine methyltransferase [Streptomyces cf. griseus XylebKG-1] gi|326656403|gb|EGE41249.1| DNA-cytosine methyltransferase [Streptomyces cf. griseus XylebKG-1] Length = 463 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 3/58 (5%) Query: 2 KACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 A D+G PQ R R+ I+ F + F + P D L + + S Sbjct: 225 NAADYGAPQVRNRVVIVAFRADLGVDIVRDFAHEVRAHPFSQDALYRSMREGSYWDRH 282 >gi|256390614|ref|YP_003112178.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928] gi|256356840|gb|ACU70337.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928] Length = 419 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIK 36 A +FGVPQ R R+ I+ F SV + P + Sbjct: 200 NAANFGVPQVRYRVIIVAFRADLSVAWTPPAETHSQ 235 >gi|254416032|ref|ZP_05029788.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196177207|gb|EDX72215.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 398 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGI 35 + A FG+PQ R+R++ + F + ++ P P Sbjct: 210 LSAPSFGIPQMRKRVFFVGFRQEKMASNYQSPLPTHS 246 >gi|2522459|gb|AAC45757.1| M.BssHII methylase [Geobacillus stearothermophilus] Length = 375 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 2/47 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHI 47 + A D+G PQ R+RL + + P P D+L + Sbjct: 316 LLAADYGAPQLRKRLIFLGCKKEFGVMELPVPTHSNT--PDLLSPNP 360 >gi|294664030|ref|ZP_06729438.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292606199|gb|EFF49442.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 349 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 14/36 (38%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK 36 + D+GVPQ RER ++ PT Sbjct: 164 INGADYGVPQIRERCIVMGIKGRDPSPPLPTHSKSP 199 >gi|291539795|emb|CBL12906.1| Site-specific DNA methylase [Roseburia intestinalis XB6B4] Length = 251 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 18/51 (35%), Gaps = 10/51 (19%) Query: 1 MKACDFGVPQRRERLYIIDFLNP----------SVEFKFPTPLGIKPRLGD 41 + D+GVPQ R+RL + N + + P+ + Sbjct: 34 LNCADYGVPQTRKRLVLHGIRNDVYQLLIQNQPNFKISLPSKTHTNDPQQN 84 >gi|229847093|ref|ZP_04467198.1| modification methylase BepI-like protein [Haemophilus influenzae 7P49H1] gi|229809922|gb|EEP45643.1| modification methylase BepI-like protein [Haemophilus influenzae 7P49H1] Length = 395 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 31/112 (27%), Gaps = 27/112 (24%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK----------------FPTPLG------IKPR 38 + A +GVPQ RER+ F ++ K +P P Sbjct: 193 LNAQFYGVPQSRERVIFFGFKKNALNKKALEELQKENIAEDYNPYPPPTHGKENLKAVVT 252 Query: 39 LGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTL 90 D + + + + + G + + ++ T+ Sbjct: 253 CTDAFINLQEPNFSKDPSQQKYSKAKY-----MGNHCQGQVEIKLNSVGPTI 299 >gi|296112182|ref|YP_003622593.1| putative C-5 cytosine-specific DNA methylase [Thiomonas sp. 3As] gi|294341994|emb|CAZ90422.1| putative C-5 cytosine-specific DNA methylase [Thiomonas sp. 3As] Length = 304 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 11/103 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL------EEHIDD--KST 52 + + D GVPQ RERL++I L+ + P DI+ ID+ +S Sbjct: 141 IDSADHGVPQHRERLFLICSLSKHP-LELDLPRRAYVPARDIIEWDLHPWAEIDEPGRSA 199 Query: 53 ISNKLWE-GHQKRKENNKIAGKGFGYGLFFEN-SATTNTLSAR 93 + + E G + G G GL + TL+ R Sbjct: 200 HTLRRIEAGRRAYGARFLAPYYGSGSGLTGRSIDRPIGTLTTR 242 >gi|157826842|ref|YP_001495906.1| cytosine-C5 specific DNA methylase [Rickettsia bellii OSU 85-389] gi|157802146|gb|ABV78869.1| Cytosine-C5 specific DNA methylase [Rickettsia bellii OSU 85-389] Length = 374 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 31/102 (30%), Gaps = 15/102 (14%) Query: 3 ACDFGVPQRRERLYIIDFLN-------PSVEFKFPTPLG--IKPRLGDILEEHIDDKSTI 53 A +GVPQ R+R++ I EF P P L + + + + Sbjct: 201 AQQYGVPQTRKRVFFIGIKESDLKRKIDEKEF-LPKPSHFDKAVTLNQVFKNLPEPNESS 259 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYY 95 + + G + + T+ A ++ Sbjct: 260 DPDQKSYSKAKFYGLNCQGNK-----SVDINKPAPTIRAEHH 296 >gi|71893964|ref|YP_279410.1| cytosine specific DNA methyltransferase [Mycoplasma hyopneumoniae J] gi|71852091|gb|AAZ44699.1| cytosine specific DNA methyltransferase [Mycoplasma hyopneumoniae J] Length = 329 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 5/89 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP---LGIKPRLGDILEEHID-DKSTISNK 56 + + DFGV Q R+R+ I F FP LG +E++++ +++ N Sbjct: 168 LNSADFGVAQIRKRVIFIANRIGLTNF-FPAAILSPENYKTLGQCIEKYMNWEENIEINH 226 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSA 85 ++ H + + + Sbjct: 227 IFTKHSAKMREKILKTSEGQSVYKNYSDG 255 >gi|257386518|ref|YP_003176291.1| DNA-cytosine methyltransferase [Halomicrobium mukohataei DSM 12286] gi|257168825|gb|ACV46584.1| DNA-cytosine methyltransferase [Halomicrobium mukohataei DSM 12286] Length = 452 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 14/26 (53%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + + D+G+PQ R+RL+ I Sbjct: 172 LDSADYGIPQHRKRLFFIGNRIGEEN 197 >gi|12229856|sp|P94147|MTA1_RUEGE RecName: Full=Modification methylase AgeI; Short=M.AgeI; AltName: Full=Cytosine-specific methyltransferase AgeI gi|8037880|gb|AAF71525.1|AF247972_2 AgeI methylase [Thalassobius gelatinovorus] gi|1695647|dbj|BAA11333.1| ageI metylase [Thalassobius gelatinovorus] gi|1588637|prf||2209243A AgeI methylase Length = 429 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHID 48 + AC++GVPQ R R++I + P P R G +L + Sbjct: 150 LDACEYGVPQHRRRVFIFGAADGQ-RIDPPQPSHVNGKRSGVVLNDQPS 197 >gi|290968468|ref|ZP_06560007.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1 str. 28L] gi|290781464|gb|EFD94053.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1 str. 28L] Length = 699 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL 39 A D+GVPQ RER+ + N ++ P P K Sbjct: 490 ASDYGVPQNRERVIFLCSKNKAI--SLPEPTVKKTTT 524 >gi|325286536|ref|YP_004262326.1| DNA-cytosine methyltransferase [Cellulophaga lytica DSM 7489] gi|324321990|gb|ADY29455.1| DNA-cytosine methyltransferase [Cellulophaga lytica DSM 7489] Length = 414 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 4/54 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP---LGIKPRLGDILEEHIDDKS 51 + A ++ VPQ+RER+ I P P +E+ + K Sbjct: 247 LNAANYYVPQKRERIIFIANRIGKKNLH-PKPLLTPDKYITTKQAIEDLVTLKD 299 >gi|40063394|gb|AAR38205.1| C-5 cytosine-specific DNA methylase [uncultured marine bacterium 580] Length = 435 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 3/33 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFP 30 + A D+G+PQRR R++I F +FK P Sbjct: 181 INAADYGMPQRRRRVFIFAFKKSSALHKKFKKP 213 >gi|83945820|ref|ZP_00958162.1| probable C-5 cytosine-specific DNA methylase [Oceanicaulis alexandrii HTCC2633] gi|83850767|gb|EAP88630.1| probable C-5 cytosine-specific DNA methylase [Oceanicaulis alexandrii HTCC2633] Length = 681 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 ++ACD+G P R+RL++I + +P P P D++ Sbjct: 166 LRACDYGAPTIRKRLFVIARRDGEP-IVWPEPSHGAPEDPDVI 207 >gi|308184264|ref|YP_003928397.1| type II DNA modification enzyme [Helicobacter pylori SJM180] gi|308060184|gb|ADO02080.1| type II DNA modification enzyme [Helicobacter pylori SJM180] Length = 188 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 3/42 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 + A D+G PQ RER++++ L FK + + Sbjct: 145 LNALDYGAPQVRERVFLVGALK---SFKQKSHSHKPIKTHSF 183 >gi|317132208|ref|YP_004091522.1| DNA-cytosine methyltransferase [Ethanoligenens harbinense YUAN-3] gi|315470187|gb|ADU26791.1| DNA-cytosine methyltransferase [Ethanoligenens harbinense YUAN-3] Length = 346 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 22/107 (20%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT----------PLGIKPRLGDILEE-HIDD 49 + A D+G+PQ+R R++ E P P +LE+ +D Sbjct: 161 LLASDYGLPQKRNRIFFCGIRKDLTE---PKGISEPPVVDLKTAKYPTTWHLLEKGAVDP 217 Query: 50 KSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 K I + N G ++A L+A K Sbjct: 218 KHYIPQGSRRTILTKPSNW--------EGDVNIDNAIARPLTATMAK 256 >gi|268611036|ref|ZP_06144763.1| prophage LambdaSa2, type II DNA modification methyltransferase, putative [Ruminococcus flavefaciens FD-1] Length = 425 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 16/22 (72%) Query: 1 MKACDFGVPQRRERLYIIDFLN 22 + + +FGV Q R+R++II FL Sbjct: 146 LNSANFGVAQARKRVFIIGFLR 167 >gi|229552043|ref|ZP_04440768.1| DNA-cytosine methyltransferase [Lactobacillus rhamnosus LMS2-1] gi|258539457|ref|YP_003173956.1| cytosine-specific methyltransferase [Lactobacillus rhamnosus Lc 705] gi|229314620|gb|EEN80593.1| DNA-cytosine methyltransferase [Lactobacillus rhamnosus LMS2-1] gi|257151133|emb|CAR90105.1| Cytosine-specific methyltransferase [Lactobacillus rhamnosus Lc 705] Length = 415 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 16/29 (55%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF 29 + +FGVPQ R+R+ + N +F F Sbjct: 200 IDCSEFGVPQERKRIILYGQRNDLPKFSF 228 >gi|75812889|ref|YP_320506.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413] gi|75705645|gb|ABA25317.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413] Length = 415 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 10/96 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+GVPQ R+R++ + + P + + D + + + E Sbjct: 161 LTASDYGVPQARKRVFFVASKFGEI---IPPEHQPQHTVRDAIADLLPVPLLPKQNTQEW 217 Query: 61 HQK-----RKENNKIAGKGFG--YGLFFENSATTNT 89 H + + FG + +ATT+T Sbjct: 218 HPDWVKGEYAKYLEKIFPNFGIVTNIETGFAATTHT 253 >gi|328463177|gb|EGF34918.1| cytosine-specific methyltransferase [Lactobacillus rhamnosus MTCC 5462] Length = 240 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 16/29 (55%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF 29 + +FGVPQ R+R+ + N +F F Sbjct: 25 IDCSEFGVPQERKRIILYGQRNDLPKFSF 53 >gi|306829494|ref|ZP_07462684.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis ATCC 6249] gi|304428580|gb|EFM31670.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis ATCC 6249] Length = 389 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Query: 2 KACDFGVPQRRER-LYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHI--DDKSTISNKLW 58 D+G+PQ R+R +Y++ + V+++FP L D + D + ++ W Sbjct: 165 NTMDYGIPQSRQRYIYLMTLKSEGVKWEFPPKEEKIITLQDAIGSLPSLDPQIREKDEQW 224 Query: 59 EGHQKRKEN 67 K+ Sbjct: 225 RFPDYEKKK 233 >gi|284989342|ref|YP_003407896.1| DNA-cytosine methyltransferase [Geodermatophilus obscurus DSM 43160] gi|284062587|gb|ADB73525.1| DNA-cytosine methyltransferase [Geodermatophilus obscurus DSM 43160] Length = 671 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID 48 + +G+PQ R+RL I+ N V F++P + + + + + Sbjct: 206 LDCRAYGIPQFRQRLIIVALRNGHV-FEWPAVAEQTVNVWNAIGDLPE 252 >gi|182625480|ref|ZP_02953252.1| Dcm [Clostridium perfringens D str. JGS1721] gi|177909320|gb|EDT71778.1| Dcm [Clostridium perfringens D str. JGS1721] Length = 339 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 2/58 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + ++ RER++I+ FKF L I E +D+K + Sbjct: 148 LSGINYNSAHSRERVFIVSIRKDIDNGSFKFKEGNDNLVILESITESFVDEKYYCKDN 205 >gi|313201769|ref|YP_004040427.1| modification methylase [Methylovorus sp. MP688] gi|312441085|gb|ADQ85191.1| putative modification methylase [Methylovorus sp. MP688] Length = 378 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKS 51 + A FG+PQ R+RL+I + + + P + G ++ + Sbjct: 142 INAIHFGLPQNRQRLFITGIRDHEPKIRLLPKSDIDQLSSGHLILARDPSRW 193 >gi|288799842|ref|ZP_06405301.1| modification methylase BepI (Cytosine-specific methyltransferase BepI) [Prevotella sp. oral taxon 299 str. F0039] gi|288333090|gb|EFC71569.1| modification methylase BepI (Cytosine-specific methyltransferase BepI) [Prevotella sp. oral taxon 299 str. F0039] Length = 406 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 24/62 (38%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A +GVPQ RER+ I F ++ + L ++ S+ + Sbjct: 195 LHAGRYGVPQNRERIIFIGFRKDALTEEALEMLKESVPFDEVSPYPAPTHYIESDIVDLY 254 Query: 61 HQ 62 ++ Sbjct: 255 YE 256 >gi|295666203|ref|XP_002793652.1| C-5 cytosine methyltransferase DmtA [Paracoccidioides brasiliensis Pb01] gi|226277946|gb|EEH33512.1| C-5 cytosine methyltransferase DmtA [Paracoccidioides brasiliensis Pb01] Length = 653 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 17/34 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 +K D+GVPQ R+RL I+ FP P Sbjct: 471 LKCQDYGVPQPRQRLVILGSGPGEPLPLFPKPTH 504 >gi|325685522|gb|EGD27614.1| modification methylase BbvI [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 380 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 4/36 (11%) Query: 6 FGVPQRRERLYIIDFLNPS----VEFKFPTPLGIKP 37 +GVPQ R R+ I+ N ++F P P P Sbjct: 167 YGVPQMRHRIIIVGIRNDLAEQGIKFHVPAPTTPNP 202 >gi|289608986|emb|CBI60514.1| unnamed protein product [Sordaria macrospora] Length = 249 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A D+GVPQ R R+ I + FP P Sbjct: 41 LRAEDYGVPQERRRVVFIANRVGAPIL-FPEPTH 73 >gi|260432507|ref|ZP_05786478.1| C-5 cytosine-specific DNA methylase [Silicibacter lacuscaerulensis ITI-1157] gi|260416335|gb|EEX09594.1| C-5 cytosine-specific DNA methylase [Silicibacter lacuscaerulensis ITI-1157] Length = 689 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 33/91 (36%), Gaps = 2/91 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++ CD+G P R+R +++ + +P P P+ + + + + + + Sbjct: 163 LRGCDYGAPTIRKRFFMVARRDGRP-IVWPKPTHGDPKSPTVKKGRLLP-WRTAAECIDW 220 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + YG + +A L+ Sbjct: 221 SIPCPSIFMTKEEAVQYGKENDCNAPKRPLT 251 >gi|302387870|ref|YP_003823692.1| DNA-cytosine methyltransferase [Clostridium saccharolyticum WM1] gi|302198498|gb|ADL06069.1| DNA-cytosine methyltransferase [Clostridium saccharolyticum WM1] Length = 569 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 6/98 (6%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + FGVPQ RER+Y++ K FP + ++ + N + Sbjct: 179 NSKHFGVPQHRERVYLVGHFGGIRGRKVFPIGGANTAPVKQLIGGSQGKRVYDINGVSVT 238 Query: 61 HQKRKENNKIAGKGFGYGLFFENSAT-----TNTLSAR 93 + + + +TL+A Sbjct: 239 LTAEGGGFAGRTGLYAVSVNRKEGIIEAINQAHTLTAS 276 >gi|296163057|ref|ZP_06845831.1| C-5 cytosine-specific DNA methylase [Burkholderia sp. Ch1-1] gi|295886701|gb|EFG66545.1| C-5 cytosine-specific DNA methylase [Burkholderia sp. Ch1-1] Length = 304 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 32/100 (32%), Gaps = 9/100 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLN-PSVEFKFPTPLGIKPRL---GDILEEHIDDKSTISNK 56 + A D GVPQ R+RL+++ + + + P R D DK S Sbjct: 141 IDAADHGVPQHRKRLFLVCTRSAAPIGLELPLRDHRPIRDVIEWDAPGWSRIDKPGRSAN 200 Query: 57 LWEGHQKRKENNKIAG----KGFGYGLFFEN-SATTNTLS 91 + G G GL + T++ Sbjct: 201 TLARIAAGRRAFGDRFVAPYYGNGSGLTGRSIDRPIGTIT 240 >gi|290957787|ref|YP_003488969.1| restriction/modification system DNA methylase [Streptomyces scabiei 87.22] gi|260647313|emb|CBG70418.1| putative restriction/modification system DNA methylase [Streptomyces scabiei 87.22] Length = 424 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 2/51 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKS 51 + A DFGVPQ R R ++ + + PTP + + L + Sbjct: 167 LNAADFGVPQTRRRAILLASRVRTAQP--PTPTHSQVAEPESLFGPGRARW 215 >gi|145218897|ref|YP_001129606.1| DNA-cytosine methyltransferase [Prosthecochloris vibrioformis DSM 265] gi|145205061|gb|ABP36104.1| DNA-cytosine methyltransferase [Chlorobium phaeovibrioides DSM 265] Length = 467 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 14/24 (58%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVE 26 A D+G+PQ R R+ ++ ++ Sbjct: 215 AKDYGIPQNRPRVLLVGLRKDIIK 238 >gi|300868938|ref|ZP_07113543.1| putative modification methylase NmeDIP [Oscillatoria sp. PCC 6506] gi|300333061|emb|CBN58735.1| putative modification methylase NmeDIP [Oscillatoria sp. PCC 6506] Length = 399 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 17/26 (65%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A ++GVPQ R+R+ ++ F ++ Sbjct: 172 INAIEYGVPQDRDRIILLGFRKDLIK 197 >gi|332878260|ref|ZP_08445986.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683711|gb|EGJ56582.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 424 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 14/104 (13%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI--------LEEHIDDKSTIS 54 A ++GV Q R+R+ I+ + S +K+P + + L +H + + Sbjct: 201 ASEYGVLQNRQRVIIVGWKKGSP-YKYPYLTKEVNKYEVLKDLFIDLPLRKHGEGELCSP 259 Query: 55 NKLWEGH--QKRKENNKIAGKGF---GYGLFFENSATTNTLSAR 93 K + K E + I F + N+ + R Sbjct: 260 IKYTQPLSKMKYLEESGIRTNDFDFTTQHIARPNNENDREIYRR 303 >gi|329940565|ref|ZP_08289846.1| restriction/modification system DNA methylase [Streptomyces griseoaurantiacus M045] gi|329300626|gb|EGG44523.1| restriction/modification system DNA methylase [Streptomyces griseoaurantiacus M045] Length = 350 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 2/51 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKS 51 + A DFGVPQ R R ++ + + PTP + + L + Sbjct: 93 LNAADFGVPQTRRRAILLASRVRTAQP--PTPTHSQVEEPESLFGPGRARW 141 >gi|159474758|ref|XP_001695492.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas reinhardtii] gi|158275975|gb|EDP01750.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas reinhardtii] Length = 1663 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 17/48 (35%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID 48 + A GVPQ R R +I L +P PL L + Sbjct: 1286 LNAAHHGVPQSRSRTFIWAALPGERLPHWPQPLHAFDHTMLSLPVPVP 1333 >gi|167841732|ref|ZP_02468416.1| putative cytosine-specific modification methylase [Burkholderia thailandensis MSMB43] Length = 587 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 ++ACD+G P R+RL+++ + +P P P+ Sbjct: 208 LRACDYGAPTIRKRLFVVG-RRDHLPIVWPAPTHGDPK 244 >gi|323484104|ref|ZP_08089474.1| hypothetical protein HMPREF9474_01225 [Clostridium symbiosum WAL-14163] gi|323402546|gb|EGA94874.1| hypothetical protein HMPREF9474_01225 [Clostridium symbiosum WAL-14163] Length = 430 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 13/19 (68%) Query: 1 MKACDFGVPQRRERLYIID 19 + + D GVPQ RER++ I Sbjct: 151 LNSKDHGVPQNRERVFFIA 169 >gi|302504717|ref|XP_003014317.1| C-5 cytosine methyltransferase DmtA [Arthroderma benhamiae CBS 112371] gi|291177885|gb|EFE33677.1| C-5 cytosine methyltransferase DmtA [Arthroderma benhamiae CBS 112371] Length = 644 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 30/90 (33%), Gaps = 7/90 (7%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 D+GVPQ R RL +I FP P L +D S I + + Sbjct: 422 NCKDYGVPQSRCRLILIAAGPGEELPPFPQPTHGDEPGKLPLVTILDAISGIPSTAPDHD 481 Query: 62 QKRKENNKIAGKGFGYGLFFENSATTNTLS 91 +R E ++ + TL+ Sbjct: 482 LERAERPFER-------RPYDPRSLARTLT 504 >gi|326483421|gb|EGE07431.1| C-5 cytosine methyltransferase DmtA [Trichophyton equinum CBS 127.97] Length = 584 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 31/90 (34%), Gaps = 7/90 (7%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 D+GVPQ R RL +I FP P L +D +I + + Sbjct: 423 NCKDYGVPQSRCRLILIAAGPGEELPPFPQPTHGDEPGKRPLVTILDAIGSIPSTAPDHD 482 Query: 62 QKRKENNKIAGKGFGYGLFFENSATTNTLS 91 +R E + F + S TL+ Sbjct: 483 LERAE------RPFERQPYDPRSL-ARTLT 505 >gi|126658774|ref|ZP_01729918.1| site-specific DNA-methyltransferase [Cyanothece sp. CCY0110] gi|126619872|gb|EAZ90597.1| site-specific DNA-methyltransferase [Cyanothece sp. CCY0110] Length = 461 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 + +FG PQ RER+ II N + F P + Sbjct: 243 NSANFGTPQIRERVIIICSRNGE-KPPFLVPTHSEK 277 >gi|322510825|gb|ADX06139.1| putative C-5 cytosine-specific DNA methyltransferase [Organic Lake phycodnavirus 1] Length = 390 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 36/100 (36%), Gaps = 9/100 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL--- 57 + + + PQ R+R+YII N + E+ F + I++ I D + K Sbjct: 227 IDSRYYNSPQSRQRIYIIC--NKNTEYIFREIKNPIVPVSTIIDNSITDFFDYTKKYKLE 284 Query: 58 ----WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + N K G ++ + T+ A Sbjct: 285 KCSGKSMMKSKLINIKSGKGGRQGERIYDITKYGPTICAS 324 >gi|322792109|gb|EFZ16181.1| hypothetical protein SINV_14765 [Solenopsis invicta] Length = 298 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 11/80 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++A +GVPQ R+R+ +I + +P P+ + + +D+K Sbjct: 226 LQAGSYGVPQTRKRMILIAAAPGEILPNYPEPMHVFNKQCCSTTVVVDNK---------- 275 Query: 61 HQKRKENNKIAGKGFGYGLF 80 + K GF + + Sbjct: 276 -KGSKITGGPFMNGFFWNIL 294 >gi|40538748|ref|NP_571264.1| DNA (cytosine-5)-methyltransferase 1 [Danio rerio] gi|19263095|gb|AAL86596.1|AF483203_1 DNA (cytosine-5)-methyltransferase [Danio rerio] Length = 1499 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 25/55 (45%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ ++P PL + L +D+K +SN Sbjct: 1182 LQAGQYGVAQTRRRAIILAAAPGEKLPRYPEPLHVFAPRACSLSVAVDEKKYVSN 1236 >gi|8132067|gb|AAF73200.1|AF152342_1 DNA-(cytosine-5)-methyltransferase [Xiphophorus maculatus x Xiphophorus helleri] Length = 1503 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 25/55 (45%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ ++P PL + L +D+K +SN Sbjct: 1185 LQAGQYGVAQTRRRAIILAAAPGEKLPRYPEPLHVFAPRACSLTVAVDEKKYVSN 1239 >gi|326469309|gb|EGD93318.1| hypothetical protein TESG_00865 [Trichophyton tonsurans CBS 112818] Length = 584 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 31/90 (34%), Gaps = 7/90 (7%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 D+GVPQ R RL +I FP P L +D +I + + Sbjct: 423 NCKDYGVPQSRCRLILIAAGPGEELPPFPQPTHGDEPGKRPLVTILDAIGSIPSTAPDHD 482 Query: 62 QKRKENNKIAGKGFGYGLFFENSATTNTLS 91 +R E + F + S TL+ Sbjct: 483 LERAE------RPFERQPYDPRSL-ARTLT 505 >gi|190338613|gb|AAI63894.1| Dnmt1 protein [Danio rerio] Length = 1500 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 25/55 (45%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ ++P PL + L +D+K +SN Sbjct: 1183 LQAGQYGVAQTRRRAIILAAAPGEKLPRYPEPLHVFAPRACSLSVAVDEKKYVSN 1237 >gi|237704019|ref|ZP_04534500.1| DNA methyltransferase [Escherichia sp. 3_2_53FAA] gi|20068985|gb|AAM09639.1|AF458982_2 m5 cytosine DNA methyltransferase [Escherichia coli] gi|226901931|gb|EEH88190.1| DNA methyltransferase [Escherichia sp. 3_2_53FAA] gi|281181427|dbj|BAI57757.1| methyltransferase [Escherichia coli SE15] gi|315286888|gb|EFU46305.1| C-5 cytosine-specific DNA methylase [Escherichia coli MS 110-3] gi|323955407|gb|EGB51176.1| C-5 cytosine-specific DNA methylase [Escherichia coli H263] Length = 396 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 33/90 (36%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + + + +PQRR+R+ ++ +P + P L +++ + D + + Sbjct: 303 LNSEHYAIPQRRKRVILVGSNDPLFSIEPPQKLTEDKESWVSVKDALSDLPPLQHGEDGS 362 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTL 90 + + + + F G + + Sbjct: 363 GKYYIHHPENDYQLFMRGNITPSEYYERNI 392 >gi|307308733|ref|ZP_07588429.1| C-5 cytosine-specific DNA methylase [Sinorhizobium meliloti BL225C] gi|306900739|gb|EFN31350.1| C-5 cytosine-specific DNA methylase [Sinorhizobium meliloti BL225C] Length = 633 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 17/90 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL------EEHIDDKSTIS 54 ++ DFG P R+RL++I + +P P P D++ + D S Sbjct: 190 LRGRDFGAPTIRKRLFVI-LRFDGKKIVWPKPTHGSPDDPDVIAGRKHPWPIVADCIDWS 248 Query: 55 ----------NKLWEGHQKRKENNKIAGKG 74 ++W+ H R + Sbjct: 249 IPCPSIFDTAEEIWKKHGVRAQRPLADNSH 278 >gi|72080942|ref|YP_288000.1| cytosine specific DNA methyltransferase [Mycoplasma hyopneumoniae 7448] Length = 393 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 5/89 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP---LGIKPRLGDILEEHID-DKSTISNK 56 + + DFGV Q R+R+ I F FP LG +E++++ +++ N Sbjct: 222 LNSADFGVAQIRKRVIFIANRIGLTNF-FPAAILSPENYKTLGQCIEKYMNWEENIEINH 280 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSA 85 ++ H + + + Sbjct: 281 IFTKHSAKMREKILKTSEGQSVYKNYSDG 309 >gi|290956749|ref|YP_003487931.1| modification methylase [Streptomyces scabiei 87.22] gi|260646275|emb|CBG69370.1| putative modification methylase [Streptomyces scabiei 87.22] Length = 400 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 2/51 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKS 51 + A +FGVPQ R R ++ + + P P + + L D+ Sbjct: 143 LNAANFGVPQTRRRAILLASRVRTAQP--PPPTHAQTAEPESLFGPGRDRW 191 >gi|209978474|gb|ACJ04671.1| DNA methyltransferase 1 [Carassius auratus] Length = 1503 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ +FP PL + +D+K +SN Sbjct: 1186 LQAGQYGVAQTRRRAIILAAAPGEKLPRFPEPLHVFAPRACSPSVVVDEKRYVSN 1240 >gi|190337769|gb|AAI63893.1| Dnmt1 protein [Danio rerio] Length = 1500 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 25/55 (45%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ ++P PL + L +D+K +SN Sbjct: 1183 LQAGQYGVAQTRRRAIILAAAPGEKLPRYPEPLHVFAPRACSLSVAVDEKKYVSN 1237 >gi|84686808|ref|ZP_01014695.1| DNA methylase, C-5 cytosine-specific family protein [Maritimibacter alkaliphilus HTCC2654] gi|84665239|gb|EAQ11718.1| DNA methylase, C-5 cytosine-specific family protein [Rhodobacterales bacterium HTCC2654] Length = 336 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 2/39 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEF--KFPTPLGIKP 37 + A FGVPQ R R II + FP P+ P Sbjct: 88 LYAPHFGVPQTRWRTVIIGIRGDQADPLRAFPEPVRNAP 126 >gi|257421714|ref|ZP_05598704.1| predicted protein [Enterococcus faecalis X98] gi|257163538|gb|EEU93498.1| predicted protein [Enterococcus faecalis X98] Length = 286 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 35/96 (36%), Gaps = 12/96 (12%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQK 63 +F +PQ R+RL +I P + +P + RL DILE++ + Sbjct: 141 ANFWLPQERKRLIVIGSKRPFPKLDYPGQITNL-RLKDILEKNPN---VSIPDYVSSRLN 196 Query: 64 RKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGS 99 K +K + T A Y KD S Sbjct: 197 GKYRDKP--------IITNLDGIAPTAVAHYAKDKS 224 >gi|255972594|ref|ZP_05423180.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T1] gi|256762698|ref|ZP_05503278.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T3] gi|257422413|ref|ZP_05599403.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis X98] gi|255963612|gb|EET96088.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T1] gi|256683949|gb|EEU23644.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T3] gi|257164237|gb|EEU94197.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis X98] Length = 351 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 4/41 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPR 38 + + D+ VPQ RER++II L F F + Sbjct: 147 LNSKDY-VPQNRERVFIIGHLRGERTRKVFPFKKNDRAFTK 186 >gi|282899236|ref|ZP_06307209.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii CS-505] gi|281195872|gb|EFA70796.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii CS-505] Length = 422 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 23/96 (23%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK----------------------FPTPLGIKPR 38 + + +FGVPQ R R+YI+ L + FP + Sbjct: 146 LNSSNFGVPQNRVRIYILGLLGKNPRLTINSDKGATDSHSFKEQFYQLSLFPD-SYSVVK 204 Query: 39 LGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKG 74 + +ILE+ + + +S + + + G Sbjct: 205 VKNILEQKVSENYYLSKRFQQQIFDAVDGKFEKLHG 240 >gi|261363795|ref|ZP_05976678.1| C-5 cytosine-specific DNA methylase family protein [Neisseria mucosa ATCC 25996] gi|288568375|gb|EFC89935.1| C-5 cytosine-specific DNA methylase family protein [Neisseria mucosa ATCC 25996] Length = 530 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 + A D+G P RERL+++ + +P P Sbjct: 200 LCAADYGAPTTRERLFMVARRDGLP-IVWPEPTH 232 >gi|189500352|ref|YP_001959822.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides BS1] gi|189495793|gb|ACE04341.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides BS1] Length = 420 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG 40 + A D+GV QRR+R+ ++ F +P P P + Sbjct: 198 LSASDYGVLQRRKRVILVGKKGRQTGF-YPEPQKWNPNVK 236 >gi|269792571|ref|YP_003317475.1| DNA-cytosine methyltransferase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100206|gb|ACZ19193.1| DNA-cytosine methyltransferase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 350 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 7/81 (8%) Query: 6 FGVPQRRERLYIIDFLNP-SVEFKFPTP------LGIKPRLGDILEEHIDDKSTISNKLW 58 +G+PQ R R+ I+ N +V FK P+P ++ D + K Sbjct: 160 YGIPQARHRIIIVGIRNDINVTFKVPSPAPYANIDNTCRTALEVPPIPADAPNNERTKQS 219 Query: 59 EGHQKRKENNKIAGKGFGYGL 79 + +R + K F L Sbjct: 220 KTVIQRLLHIKPGENAFTADL 240 >gi|21225136|ref|NP_630915.1| DNA methylase [Streptomyces coelicolor A3(2)] gi|6900913|emb|CAB71857.1| putative DNA methylase [Streptomyces coelicolor A3(2)] Length = 423 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKS 51 + A DFGVPQ R+R ++ + + PTP + + L + Sbjct: 166 LNAADFGVPQTRKRAILLASRVRTAQP--PTPTHAQLAEPESLFGPGRARW 214 >gi|319782483|ref|YP_004141959.1| DNA-cytosine methyltransferase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168371|gb|ADV11909.1| DNA-cytosine methyltransferase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 368 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLN--PSVEFKFPTP 32 + A D+G+ QRR+R++I+ + +P Sbjct: 157 LDARDYGIAQRRKRVFILGLRRGEELGKIAWPPK 190 >gi|313674498|ref|YP_004052494.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] gi|312941196|gb|ADR20386.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] Length = 735 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 12/22 (54%) Query: 2 KACDFGVPQRRERLYIIDFLNP 23 + ++GVPQ RER+ I Sbjct: 472 NSSNYGVPQNRERVLFIGCRKD 493 >gi|229100187|ref|ZP_04231087.1| hypothetical protein bcere0020_53880 [Bacillus cereus Rock3-29] gi|228683229|gb|EEL37207.1| hypothetical protein bcere0020_53880 [Bacillus cereus Rock3-29] Length = 306 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 16/24 (66%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS 24 + + +FGVPQ R+R++II L Sbjct: 153 LNSREFGVPQSRDRVFIIGHLRGH 176 >gi|323516968|gb|ADX91349.1| site-specific DNA methylase [Acinetobacter baumannii TCDC-AB0715] gi|323518452|gb|ADX92833.1| site-specific DNA methylase [Acinetobacter baumannii TCDC-AB0715] Length = 492 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 1/49 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDD 49 M A D+G P R R +++ + +P P P ++ + Sbjct: 171 MSARDYGSPTLRRRFFLVA-RRDNFPIVWPKPTHAAPDSKAVIAGKLKP 218 >gi|86151502|ref|ZP_01069717.1| type II DNA-methyltransferase [Campylobacter jejuni subsp. jejuni 260.94] gi|85841849|gb|EAQ59096.1| type II DNA-methyltransferase [Campylobacter jejuni subsp. jejuni 260.94] Length = 187 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 16/28 (57%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK 28 + A DFGVPQ R+R ++I +F Sbjct: 153 LNALDFGVPQNRQRAFLIASKIFKFDFS 180 >gi|153932387|ref|YP_001385110.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. ATCC 19397] gi|153937602|ref|YP_001388579.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] gi|152928431|gb|ABS33931.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. ATCC 19397] gi|152933516|gb|ABS39015.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] Length = 350 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGD 41 +G+PQ R R+ II F+F P + D Sbjct: 160 YGIPQARHRVIIIGIRKDLP-FEFKVPSPEPYKDMD 194 >gi|302654293|ref|XP_003018954.1| C-5 cytosine methyltransferase DmtA [Trichophyton verrucosum HKI 0517] gi|291182644|gb|EFE38309.1| C-5 cytosine methyltransferase DmtA [Trichophyton verrucosum HKI 0517] Length = 582 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 14/33 (42%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 D+GVPQ R RL +I FP P Sbjct: 421 NCKDYGVPQSRCRLILIAAGPGEELPPFPQPTH 453 >gi|325696380|gb|EGD38271.1| modification methylase HgiDII [Streptococcus sanguinis SK160] Length = 358 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 5/48 (10%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE-----FKFPTPLGIKPRLGDILE 44 D+GVPQ R+RL + ++ P ++L Sbjct: 153 NTADYGVPQLRKRLVLHGIKKELLDQTTLTLNLPPKTHSNIPELNLLP 200 >gi|172038386|ref|YP_001804887.1| site-specific DNA-methyltransferase [Cyanothece sp. ATCC 51142] gi|171699840|gb|ACB52821.1| probable site-specific DNA-methyltransferase [Cyanothece sp. ATCC 51142] Length = 461 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 + +FG PQ RER+ II N + F P + Sbjct: 243 NSANFGTPQIRERVVIICSRNGE-KPPFLIPTHSEK 277 >gi|156541588|ref|XP_001600175.1| PREDICTED: similar to DNA (cytosine-5)-methyltransferase [Nasonia vitripennis] Length = 1392 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTIS 54 ++A +G+PQ R R+ +I + +FP PL + + L +D+ + Sbjct: 1077 LQAGSYGIPQTRRRMILIAAAPGEILPRFPNPLHVFSKSTCQLTVDVDNVKYFT 1130 >gi|54020626|ref|YP_116141.1| cytosine specific DNA methyltransferase [Mycoplasma hyopneumoniae 232] gi|53987799|gb|AAV28000.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232] Length = 416 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 5/89 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP---LGIKPRLGDILEEHID-DKSTISNK 56 + + DFGV Q R+R+ I F FP LG +E++++ +++ N Sbjct: 245 LNSADFGVAQIRKRVIFIANRIGLTNF-FPAAILSPENYKTLGQCIEKYMNWEENIEINH 303 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSA 85 ++ H + + + Sbjct: 304 IFTKHSAKMREKILKTSEGQSVYKNYSDG 332 >gi|327438866|dbj|BAK15231.1| site-specific DNA methylase [Solibacillus silvestris StLB046] Length = 392 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 4/36 (11%) Query: 5 DFGVPQRRERLYIIDFLNPSVE----FKFPTPLGIK 36 ++G+PQ R R+ I+ + FK P P Sbjct: 167 EYGIPQARHRIIIVGIRKDLADEGIVFKVPAPTTPN 202 >gi|257877766|ref|ZP_05657419.1| C-5 cytosine-specific DNA methylase [Enterococcus casseliflavus EC20] gi|257811932|gb|EEV40752.1| C-5 cytosine-specific DNA methylase [Enterococcus casseliflavus EC20] Length = 416 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 16/35 (45%) Query: 5 DFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL 39 +FGVPQ+R+R+ II + + L Sbjct: 189 EFGVPQKRKRVIIIGIRRDNDNLNYQNILHQFYNE 223 >gi|198416008|ref|XP_002122948.1| PREDICTED: Zn-finger (CXXC)-5 [Ciona intestinalis] Length = 1305 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 23/65 (35%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++A +GV Q R R I+ +P PL G L + D +N W Sbjct: 1003 LQAGHYGVSQTRRRAIILAAAPGEQLPLYPEPLHTFSTRGGSLSAQVGDTRYTNNIKWST 1062 Query: 61 HQKRK 65 + Sbjct: 1063 SAPYR 1067 >gi|228947350|ref|ZP_04109643.1| hypothetical protein bthur0007_34800 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228812349|gb|EEM58677.1| hypothetical protein bthur0007_34800 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 290 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 16/24 (66%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS 24 + + +FGVPQ R+R++II L Sbjct: 137 LNSREFGVPQSRDRVFIIGHLRGH 160 >gi|154497795|ref|ZP_02036173.1| hypothetical protein BACCAP_01773 [Bacteroides capillosus ATCC 29799] gi|150273293|gb|EDN00438.1| hypothetical protein BACCAP_01773 [Bacteroides capillosus ATCC 29799] Length = 222 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 18/23 (78%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + + FGVPQ R+R+++I +L+P Sbjct: 141 LNSKHFGVPQSRKRVFLICYLDP 163 >gi|325141979|gb|EGC64416.1| cytosine-specific methyltransferase MthTI [Neisseria meningitidis 961-5945] Length = 364 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 4/33 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE----FKF 29 + A ++GVPQ RER+ ++ FL+ V+ F + Sbjct: 164 INAIEYGVPQDRERIILVGFLSQHVDALQKFDW 196 >gi|3818628|gb|AAC69603.1| DNA methyltransferase [Danio rerio] Length = 700 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 25/55 (45%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ ++P PL + L +D+K +SN Sbjct: 383 LQAGQYGVAQTRRRAIILAAAPGEKLPRYPEPLHVFAPRACSLSVAVDEKKYVSN 437 >gi|301321463|gb|ADK70106.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 493 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 6/91 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL----EEHIDDKSTISNK 56 + A DFGVPQ R R II N + K P K + D + + + SN Sbjct: 126 LNAYDFGVPQTRSRTTIICHKNHPI--KLPIGNHKKVNIEDAISDLNYLNSNQGEFESNY 183 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATT 87 L E + ++ + + +S Sbjct: 184 LLEPKSEYQKMMRKNSNKLYNHITTNHSKIA 214 >gi|225862882|ref|YP_002748260.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102] gi|225789623|gb|ACO29840.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102] Length = 360 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 29/88 (32%), Gaps = 4/88 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A ++GVPQ+R R + + + F + +L + ++ + K + Sbjct: 153 LDASEYGVPQKRLRAFFLATRQDIPQITF----EKLVKQPKVLVKEAIEELYVLEKKAQK 208 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTN 88 + + L + N Sbjct: 209 GETTYLLQSKPASPYQNYLRNTENKIMN 236 >gi|78045454|ref|YP_361704.1| putative cytosine-specific DNA methyltransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78033958|emb|CAJ19957.1| putative cytosine-specific DNA methyltransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 501 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 5/94 (5%) Query: 7 GVPQRRERLYIIDFLNPSVE----FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQ 62 G + R+R + E P + LGD L+ + + +E Sbjct: 322 GTIENRKRWWFCAISKGLAESYSMANLPAQPRLYETLGDALDASAHSDESRW-RAYEYLA 380 Query: 63 KRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 ++ + AGKGF L ++ T+ Y K Sbjct: 381 EKNARDAAAGKGFKRQLVTPDATEVGTIGRGYAK 414 >gi|126433434|ref|YP_001069125.1| DNA-cytosine methyltransferase [Mycobacterium sp. JLS] gi|126233234|gb|ABN96634.1| DNA-cytosine methyltransferase [Mycobacterium sp. JLS] Length = 349 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 + A D+GV QRR R +I V+ P P K D+ Sbjct: 130 LLAADYGVAQRRPRTIVIGSRVGRVD--LPPPTHSKTPTVDL 169 >gi|16125285|ref|NP_419849.1| C-5 cytosine-specific DNA methylase [Caulobacter crescentus CB15] gi|221234022|ref|YP_002516458.1| DNA-cytosine methyltransferase [Caulobacter crescentus NA1000] gi|13422327|gb|AAK23017.1| C-5 cytosine-specific DNA methylase [Caulobacter crescentus CB15] gi|220963194|gb|ACL94550.1| DNA-cytosine methyltransferase [Caulobacter crescentus NA1000] Length = 335 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 4/56 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT----PLGIKPRLGDILEEHIDDKST 52 + A D G PQ R RL+++ + + P P + + D Sbjct: 155 LNAKDHGTPQNRPRLFLLGIDSRRFQSIDPKNIVVPTQPTITVRSAIGHLTDPVHF 210 >gi|168697993|ref|ZP_02730270.1| DNA methyltransferase [Gemmata obscuriglobus UQM 2246] Length = 489 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 16/23 (69%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + A FGVPQRR R++++ +L Sbjct: 142 LDAQHFGVPQRRRRVFVVGYLGD 164 >gi|121634523|ref|YP_974768.1| putative modification methylase NmeDI [Neisseria meningitidis FAM18] gi|120866229|emb|CAM09969.1| putative modification methylase NmeDI [Neisseria meningitidis FAM18] Length = 383 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 4/33 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE----FKF 29 + A ++GVPQ RER+ ++ FL+ V+ F + Sbjct: 183 INAIEYGVPQDRERIILVGFLSQHVDALQKFDW 215 >gi|91976449|ref|YP_569108.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisB5] gi|91682905|gb|ABE39207.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisB5] Length = 490 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 13/24 (54%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS 24 + A FG PQ R R++++ + Sbjct: 171 LNARYFGSPQSRSRVFMVAWRGDY 194 >gi|169825537|ref|YP_001695712.1| modification methylase [Lysinibacillus sphaericus C3-41] gi|168994814|gb|ACA42353.1| Modification methylase [Lysinibacillus sphaericus C3-41] Length = 296 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 35/99 (35%), Gaps = 16/99 (16%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL-GDILEEHIDDKSTISNKLWEG 60 A + +PQ R+RL +I P +P IK R D+ E K K EG Sbjct: 150 NANMW-LPQERKRLIVIGTKRPFNNLDYPESTPIKMRDIIDVGTEVYTPKYV--QKRLEG 206 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGS 99 H + K + + T A Y KD S Sbjct: 207 HYRDK------------PIITDLDGIAPTCVAHYSKDRS 233 >gi|327309192|ref|XP_003239287.1| hypothetical protein TERG_01268 [Trichophyton rubrum CBS 118892] gi|326459543|gb|EGD84996.1| hypothetical protein TERG_01268 [Trichophyton rubrum CBS 118892] Length = 622 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 14/33 (42%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 D+GVPQ R RL +I FP P Sbjct: 461 NCKDYGVPQSRCRLILIAAGPGEELPPFPQPTH 493 >gi|2129405|pir||S53867 DNA (cytosine)-methyltransferase (EC 2.1.1.-) Dcm5a - Halobacterium salinarum gi|732794|emb|CAA56444.1| cytosine methylase [Halobacterium phage phiH] Length = 245 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 15/25 (60%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV 25 + A D+G PQ RERL+I+ + Sbjct: 178 LNAADYGDPQSRERLFIMASRSKLP 202 >gi|254413040|ref|ZP_05026812.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196180204|gb|EDX75196.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 355 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 3/52 (5%) Query: 1 MKACDFGVPQRRERLYIIDF---LNPSVEFKFPTPLGIKPRLGDILEEHIDD 49 + A + VPQ R+R+ I + LN +F P L D + + Sbjct: 151 LNARHYNVPQDRKRVIFIGYHIDLNKCFKFNTLVPGYRMFTLRDAIWNLRES 202 >gi|325131820|gb|EGC54520.1| DNA-cytosine methyltransferase [Neisseria meningitidis M6190] gi|325137870|gb|EGC60445.1| cytosine-specific methyltransferase MthTI [Neisseria meningitidis ES14902] gi|325197946|gb|ADY93402.1| cytosine-specific methyltransferase MthTI [Neisseria meningitidis G2136] Length = 376 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 4/33 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE----FKF 29 + A ++GVPQ RER+ ++ FL+ V+ F + Sbjct: 176 INAIEYGVPQDRERIILVGFLSQHVDALQKFDW 208 >gi|294155572|ref|YP_003559956.1| cytosine-specific DNA modification methyltransferase [Mycoplasma crocodyli MP145] gi|291599876|gb|ADE19372.1| cytosine-specific DNA modification methyltransferase [Mycoplasma crocodyli MP145] Length = 415 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 36/110 (32%), Gaps = 22/110 (20%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS------------------VEFKFPTPLGIKPRLGDI 42 + A D+ +PQ+R+R++I + FP + + D+ Sbjct: 169 LNAGDYSMPQKRKRVFIFAYRKDLKWSKSIKCNNLNLNELNIFNKVFPIETITELKHIDL 228 Query: 43 LEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + +++ K H E + + + +TLS+ Sbjct: 229 NKYEDVLDISLNYKSGSFH----ECGIMIDNNIYHSKIKPINEVKHTLSS 274 >gi|56692910|ref|YP_164274.1| DNA cytosine methyltransferase [Pseudomonas phage F116] gi|48527496|gb|AAT45871.1| DNA cytosine methyltransferase [Pseudomonas phage F116] Length = 687 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 4/88 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHIDD--KSTISNKL 57 +KACDFG P RERL++I + +P P P+ G + D + +K Sbjct: 212 IKACDFGAPTSRERLFMIA-RSDGHPIVWPEPTHAKHPKKGQQKWKTAADCIDWSYPSKS 270 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSA 85 G +K + G F ++ Sbjct: 271 IFGRKKALAEATLRRVAKGVKKFVLDNP 298 >gi|12229868|sp|Q9RLM4|MTD1_NEIMC RecName: Full=Probable modification methylase NmeDIP; Short=M.NmeDIP; AltName: Full=Cytosine-specific methyltransferase NmeDIP gi|6179652|emb|CAB59897.1| putative m5C methylase [Neisseria meningitidis] Length = 420 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 4/33 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE----FKF 29 + A ++GVPQ RER+ ++ FL+ V+ F + Sbjct: 220 INAIEYGVPQDRERIILVGFLSQHVDALQKFDW 252 >gi|326789842|ref|YP_004307663.1| C-5 cytosine-specific DNA methylase [Clostridium lentocellum DSM 5427] gi|326540606|gb|ADZ82465.1| C-5 cytosine-specific DNA methylase [Clostridium lentocellum DSM 5427] Length = 506 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 +KACD+G P R+R ++I K+P P ++ + T ++ Sbjct: 159 LKACDYGAPTSRKRFFLIA-RCDGQPIKWPEPTHSNKDSIEVQFGLKEPYKTAAD 212 >gi|91205698|ref|YP_538053.1| cytosine-C5 specific DNA methylase [Rickettsia bellii RML369-C] gi|91069242|gb|ABE04964.1| Cytosine-C5 specific DNA methylase [Rickettsia bellii RML369-C] Length = 222 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 13/101 (12%) Query: 3 ACDFGVPQRRERLYIIDF------LNPSVEFKFPTPLG--IKPRLGDILEEHIDDKSTIS 54 A +GVPQ R+R++ I + P P L + + + + Sbjct: 49 AQQYGVPQTRKRVFFIGIKESDLKRKIDEKEFLPKPSHFDKAVTLNQVFKNLPEPNESSD 108 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYY 95 + + G + + T+ A ++ Sbjct: 109 PDQKSYSKAKFYGLNCQGNK-----SVDINKPAPTIRAEHH 144 >gi|312601558|gb|ADQ90813.1| Cytosine-specific methyltransferase [Mycoplasma hyopneumoniae 168] Length = 406 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 5/89 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFP----TPLGIKPRLGDILEEHIDDKSTISNK 56 + + DFGV Q R+R+ I F FP +P K I + +++ N Sbjct: 245 LNSADFGVAQIRKRVIFIANRIGLTNF-FPAAILSPENYKTLGQCIEKYMNWEENIEINH 303 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSA 85 ++ H + + + Sbjct: 304 IFTKHSAKMREKILKTSEGQSVYKNYSDG 332 >gi|283786285|ref|YP_003366150.1| prophage DNA cytosine methylase [Citrobacter rodentium ICC168] gi|282949739|emb|CBG89358.1| putative prophage DNA cytosine methylase [Citrobacter rodentium ICC168] Length = 575 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 ++ACDFG P R+R +++ E +P P P+ ++ Sbjct: 193 LRACDFGAPTIRKRFFMV-MRCDGEEIHWPEPTHGDPKSLEV 233 >gi|330880033|gb|EGH14182.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 722 Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 4/88 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHIDDKSTISN--KL 57 +KACDFG P RERL++I +P P +P G + ++ K Sbjct: 224 IKACDFGAPTSRERLFMIA-RCDGQPIVWPEPTHAKRPTKGQKPWRTAAECIDFTDLGKS 282 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSA 85 G +K + G F ++ Sbjct: 283 IFGRKKDLAPATLRRVAKGMKKFVIDNP 310 >gi|300024520|ref|YP_003757131.1| C-5 cytosine-specific DNA methylase [Hyphomicrobium denitrificans ATCC 51888] gi|299526341|gb|ADJ24810.1| C-5 cytosine-specific DNA methylase [Hyphomicrobium denitrificans ATCC 51888] Length = 548 Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 +KACD+G P R+RL++I + +P P KP Sbjct: 162 LKACDYGAPTIRKRLFLIARRDGLP-IVWPEPTHAKP 197 >gi|256375192|ref|YP_003098852.1| DNA-cytosine methyltransferase [Actinosynnema mirum DSM 43827] gi|255919495|gb|ACU35006.1| DNA-cytosine methyltransferase [Actinosynnema mirum DSM 43827] Length = 361 Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 + A DFGVPQRR R +I V + P P Sbjct: 135 LLAADFGVPQRRRRAIVIGSRVGKV--ELPAPTH 166 >gi|325860528|ref|ZP_08173633.1| modification methylase HaeIII [Prevotella denticola CRIS 18C-A] gi|325481968|gb|EGC84996.1| modification methylase HaeIII [Prevotella denticola CRIS 18C-A] Length = 403 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 14/27 (51%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKF 29 A D+GVPQ R R+ II F F Sbjct: 175 AKDYGVPQSRYRVLIIGTERNLPTFDF 201 >gi|2894387|emb|CAA74997.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase (C2) [Bacillus pumilus] Length = 392 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 16/25 (64%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV 25 + DFGVPQ R+R+++I N + Sbjct: 152 LNTSDFGVPQGRQRVFVIAARNEAF 176 >gi|254413124|ref|ZP_05026896.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196180288|gb|EDX75280.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 416 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFP-TPLGIKPRLGDILE 44 + A ++GVPQ RER+ ++ F + + + P P G Sbjct: 172 INAIEYGVPQDRERIILLGFRQSLIRDIELPVEPSAKFIPEGIFPW 217 >gi|22091184|ref|NP_665998.1| M.PhiCh1-II [Natrialba phage PhiCh1] gi|289594296|ref|YP_003482303.1| DNA-cytosine methyltransferase [Natrialba magadii ATCC 43099] gi|22003505|gb|AAM88754.1|AF440695_80 putative C5-cytosine methyltransferase [Natrialba phage PhiCh1] gi|289533393|gb|ADD07741.1| DNA-cytosine methyltransferase [Natrialba magadii ATCC 43099] Length = 283 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 2 KACDFGVPQRRERLYIIDFLNP 23 A D+GVPQ RER+ +I Sbjct: 189 DAADYGVPQHRERVLVIGKRVD 210 >gi|311977244|gb|ADQ20500.1| M1.BfuAI [Lysinibacillus fusiformis] Length = 357 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK 36 A D+GVPQ+R R+ +I + FP P + Sbjct: 162 AADYGVPQKRYRMLMIGNRLGQ-DIIFPEPTHSE 194 >gi|319764257|ref|YP_004128194.1| c-5 cytosine-specific DNA methylase [Alicycliphilus denitrificans BC] gi|317118818|gb|ADV01307.1| C-5 cytosine-specific DNA methylase [Alicycliphilus denitrificans BC] Length = 686 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++ACD P R+RL+ + + ++P P +P +L + T + Sbjct: 208 LRACDHDTPTIRKRLFFVGRRDGLP-IRWPEPTHGEPTSRAVLAGKLAPYRTAAE 261 >gi|258570503|ref|XP_002544055.1| predicted protein [Uncinocarpus reesii 1704] gi|237904325|gb|EEP78726.1| predicted protein [Uncinocarpus reesii 1704] Length = 571 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 29/86 (33%), Gaps = 5/86 (5%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQKRK 65 +GVPQ+R+RL II FP P P I D + H ++ Sbjct: 422 YGVPQQRKRLVIIGAGPGESLPPFPKPTHGPPDSNLRPYRTILDAIGNIPEGAPDHDPKR 481 Query: 66 ENNKIAGKGFGYGLFFENSATTNTLS 91 + K + + T++ Sbjct: 482 AYFRNITK-----TPYSPRSFAKTIT 502 >gi|190571760|ref|YP_001966439.1| M1.LlaJI [Lactococcus lactis] gi|46487639|gb|AAS99177.1| M1.LlaJI [Lactococcus lactis] Length = 465 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 26/83 (31%), Gaps = 5/83 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHID----DKSTISN 55 + D+ VPQ RER ++ + P + D + + K Sbjct: 244 INTKDYSVPQTRERAIMLLTRKDIKTIWTLPQKDEKVVTMFDAIGDLPPLDPFVKDIDEE 303 Query: 56 KLWEGHQKRKENNKIAGKGFGYG 78 +L + E + A K + Sbjct: 304 ELIKLFPHYHERKEKALKISKWH 326 >gi|297159196|gb|ADI08908.1| DNA-cytosine methyltransferase [Streptomyces bingchenggensis BCW-1] Length = 664 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 3/65 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTP--LGIKPRLGDILEEHIDDKSTISNKLWE 59 A +GVPQ R+RL ++ N +F++ + L + + K + ++ E Sbjct: 203 DAWRYGVPQHRKRLILLA-RNDIEKFEWQQEVTEEERTTLSHAIGDLPPLKVVPTERVGE 261 Query: 60 GHQKR 64 + Sbjct: 262 RVRSY 266 >gi|229171704|ref|ZP_04299279.1| Modification methylase Sau3AI [Bacillus cereus MM3] gi|228611850|gb|EEK69097.1| Modification methylase Sau3AI [Bacillus cereus MM3] Length = 430 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 36/98 (36%), Gaps = 13/98 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G QRR R++I +L+ S +I + + N + Sbjct: 156 INAADYGYSQRRRRVFIFAYLDESG-------------FANIQSKVEPLEVLCENGFFAP 202 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 K E K K + L + ++T A YY G Sbjct: 203 VFKVLEAPKENKKRGQFRLPNDIVEVSDTFKAEYYNSG 240 >gi|194335097|ref|YP_002016957.1| DNA-cytosine methyltransferase [Prosthecochloris aestuarii DSM 271] gi|194312915|gb|ACF47310.1| DNA-cytosine methyltransferase [Prosthecochloris aestuarii DSM 271] Length = 340 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 D+GVPQ R+RL ++ + P K + ++ + ++++ Sbjct: 153 NIKDYGVPQSRKRLVLVGSR--LAPLRIAEPTKKKKTVRQVIGKLPKPENSMDP 204 >gi|193783730|dbj|BAG53712.1| unnamed protein product [Homo sapiens] Length = 540 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 223 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 277 >gi|4704471|gb|AAD28102.1| cytosine DNA methyltransferase [Rattus norvegicus] Length = 349 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 136 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 190 >gi|312873586|ref|ZP_07733633.1| modification methylase BanI [Lactobacillus iners LEAF 2052A-d] gi|311090839|gb|EFQ49236.1| modification methylase BanI [Lactobacillus iners LEAF 2052A-d] Length = 487 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 2/79 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID-DKSTISNKLWE 59 + + DF + Q R R+YII + V+ K L DI++ ++ K+ + KL Sbjct: 216 LNSKDFNLAQSRNRIYIIGLRSGKVK-KLEGFEKKTSVLKDIIDSRVEAHKTDFTKKLLS 274 Query: 60 GHQKRKENNKIAGKGFGYG 78 + + K G Sbjct: 275 HYSVDELYGKAIKDKRGGE 293 >gi|299531463|ref|ZP_07044871.1| DNA-cytosine methyltransferase [Comamonas testosteroni S44] gi|298720626|gb|EFI61575.1| DNA-cytosine methyltransferase [Comamonas testosteroni S44] Length = 435 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF--PTPLG 34 + A DFGVPQ R R++ + F ++ P P Sbjct: 263 LAAHDFGVPQARRRVFFVGFRAARDAARWAEPEPTH 298 >gi|123442605|ref|YP_001006582.1| putative cytosine-specific modification methylase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089566|emb|CAL12415.1| putative cytosine-specific modification methylase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 581 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 ++A D+G P R+R +++ + +P P P+ D+ Sbjct: 196 LRASDYGAPTIRKRFFMV-MRCDGLPVTWPEPTHGDPKSLDV 236 >gi|74136491|ref|NP_001028141.1| DNA (cytosine-5)-methyltransferase 1 [Monodelphis domestica] gi|22023943|gb|AAM89258.1|AF527541_1 cytosine-5-methyltransferase [Monodelphis domestica] Length = 1514 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1197 LQAGQYGVAQTRRRAIILAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSN 1251 >gi|315446158|ref|YP_004079037.1| DNA-methyltransferase Dcm [Mycobacterium sp. Spyr1] gi|315264461|gb|ADU01203.1| DNA-methyltransferase Dcm [Mycobacterium sp. Spyr1] Length = 365 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 3/51 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHIDDK 50 + A D+GV QRR R +I ++ P P P LG + D+ Sbjct: 146 LLAADYGVAQRRPRTIVIGSRIGRID--LPRPTHSKTPTLGREPWATVRDR 194 >gi|290999391|ref|XP_002682263.1| cytosine-5 DNA methyltransferase [Naegleria gruberi] gi|284095890|gb|EFC49519.1| cytosine-5 DNA methyltransferase [Naegleria gruberi] Length = 1527 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 17/51 (33%), Gaps = 2/51 (3%) Query: 2 KACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDILEEHIDDK 50 A FG+PQ R R+ FP ++ +L+ K Sbjct: 1116 NAQHFGLPQTRTRVIFFGARKDENLKVPDFPKNTHASHKVSAVLDNASQVK 1166 >gi|257075428|ref|ZP_05569789.1| DNA-cytosine methyltransferase [Ferroplasma acidarmanus fer1] Length = 386 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 10/97 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPL--GIKPRLGDILEEHIDDKSTISNKLW 58 + A DF V Q+R+R II + + +P +G++L + + Sbjct: 168 LNAKDFMVLQQRKREIIIGWKKGY-KLDYPEFETVEHNYNVGELLNDLPG----LEPGQG 222 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYY 95 + Q+ K + G +++ ARY+ Sbjct: 223 DYLQEYKSGASDYLEKTG---IRKHNDILIQHKARYH 256 >gi|6273357|gb|AAF06333.1| DNA methyltransferase 1 [Xenopus laevis] Length = 373 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R ++ FP PL + L +D+K +SN Sbjct: 57 LQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACSLGVIVDEKKYVSN 111 >gi|119897062|ref|YP_932275.1| C-5 cytosine-specific DNA methylase [Azoarcus sp. BH72] gi|119669475|emb|CAL93388.1| probable C-5 cytosine-specific DNA methylase [Azoarcus sp. BH72] Length = 434 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 + ++G PQ RER+ I ++E FP P Sbjct: 174 NSVNYGAPQIRERVIFIGNR-FNMEVDFPNPTH 205 >gi|213156207|ref|YP_002318627.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii AB0057] gi|301346662|ref|ZP_07227403.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii AB056] gi|301596880|ref|ZP_07241888.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii AB059] gi|332852721|ref|ZP_08434355.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii 6013150] gi|332871075|ref|ZP_08439688.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii 6013113] gi|213055367|gb|ACJ40269.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii AB0057] gi|332729074|gb|EGJ60422.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii 6013150] gi|332731835|gb|EGJ63115.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii 6013113] Length = 492 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 1/40 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG 40 M A D+G P R R +++ + +P P P Sbjct: 171 MSARDYGSPTLRRRFFLVA-RRDNFPIVWPKPTHAAPDSK 209 >gi|218244975|ref|YP_002370346.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] gi|218165453|gb|ACK64190.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] Length = 423 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 30/104 (28%), Gaps = 20/104 (19%) Query: 8 VPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDD-------------KSTI 53 VPQ+RER+ II N FPTP L + L+ D + Sbjct: 223 VPQKRERVVIIAVRNDLAIPALFPTPKNYTISLREALQNCPDSIGVEYNERKKAIMELVP 282 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFEN------SATTNTLS 91 S W + + F G T++ Sbjct: 283 SGGNWRNLPLETQKKYMKNSFFKGGGRTGFAKRLSWDEPCLTIT 326 >gi|326789362|ref|YP_004307183.1| DNA-cytosine methyltransferase [Clostridium lentocellum DSM 5427] gi|326540126|gb|ADZ81985.1| DNA-cytosine methyltransferase [Clostridium lentocellum DSM 5427] Length = 415 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 37/112 (33%), Gaps = 22/112 (19%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI------------------KPRLGDI 42 + A DFG+PQ+RER+Y++ L + K + L +I Sbjct: 213 LNAKDFGIPQKRERVYMLSVLVGNDALKLMELKRYLDEHKLENINEINRLKRREISLREI 272 Query: 43 LEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFG---YGLFFENSATTNTLS 91 L+ + ++ + Q ++ Y NT++ Sbjct: 273 LKINYEENPLYREEA-NYSQPNDTPSRQRIFEKNDVLYDGVNIKDIIVNTVT 323 >gi|16331413|ref|NP_442141.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803] gi|1001584|dbj|BAA10211.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803] Length = 424 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 16/32 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP 32 + A +G PQ+R+RL I+ +P P Sbjct: 157 LDASLYGAPQKRKRLIILGSRKDVKPVTYPLP 188 >gi|260551407|ref|ZP_05825607.1| site-specific DNA methylase [Acinetobacter sp. RUH2624] gi|260405570|gb|EEW99062.1| site-specific DNA methylase [Acinetobacter sp. RUH2624] Length = 490 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 1/40 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG 40 M A D+G P R R +++ + +P P P Sbjct: 169 MSARDYGSPTLRRRFFLVA-RRDNFPIVWPKPTHAAPDSK 207 >gi|237720893|ref|ZP_04551374.1| DNA-cytosine methyltransferase [Bacteroides sp. 2_2_4] gi|229449728|gb|EEO55519.1| DNA-cytosine methyltransferase [Bacteroides sp. 2_2_4] Length = 370 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 34/113 (30%), Gaps = 21/113 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEF-----KFPTPLGIKPRLGDILEEHIDDKSTIS 54 + A GVPQ+RER++ I + V F F I + +I + Sbjct: 194 LDASKMGVPQKRERVFFICIRHDLGVHFLKVSDLFNVEPHICMKFNEIPILMKEITDFKG 253 Query: 55 NKLWEGHQKRKENNKIAGKG---------------FGYGLFFENSATTNTLSA 92 ++ G + R F + NT+++ Sbjct: 254 KEIKNGTKIRYVWEHREITDKDMSDTCMRLYGKELFFSKKYTLEDRICNTITS 306 >gi|184158530|ref|YP_001846869.1| site-specific DNA methylase [Acinetobacter baumannii ACICU] gi|183210124|gb|ACC57522.1| Site-specific DNA methylase [Acinetobacter baumannii ACICU] Length = 492 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 1/40 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG 40 M A D+G P R R +++ + +P P P Sbjct: 171 MSARDYGSPTLRRRFFLVA-RRDNFPIVWPKPTHAAPDSK 209 >gi|17231665|ref|NP_488213.1| cytosine-specific DNA methyltransferase [Nostoc sp. PCC 7120] gi|8453097|gb|AAF75232.1|AF220508_2 cytosine-specific DNA methyltransferase [Nostoc sp. PCC 7120] gi|17133308|dbj|BAB75872.1| cytosine-specific DNA methyltransferase [Nostoc sp. PCC 7120] Length = 385 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A ++GVPQ RER+ ++ F + F +L D + + K++ Sbjct: 172 INAIEYGVPQDRERIILLGFSKSFIH-DFWNINSANEKLLDFVFPWENKVLYPKEKVFAY 230 >gi|26553946|ref|NP_757880.1| cytosine-specific DNA methyltransferase [Mycoplasma penetrans HF-2] gi|26453954|dbj|BAC44284.1| cytosine-specific DNA methyltransferase [Mycoplasma penetrans HF-2] Length = 395 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 32/105 (30%), Gaps = 12/105 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + + +F Q RER++ + + FKF +K I + +D + L Sbjct: 217 LNSKNFDNCQNRERVFCLSIRDDYLEKTGFKFKELEKVKNPPKKIKDILVDSSNYKYLNL 276 Query: 58 WEG---------HQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + K + + TL+A Sbjct: 277 NKYETTTFRETKSNIISRSLKNYTTFNSENYVYNINGIGPTLTAS 321 >gi|270307689|ref|YP_003329747.1| DNA-cytosine methyltransferase [Dehalococcoides sp. VS] gi|270153581|gb|ACZ61419.1| DNA-cytosine methyltransferase [Dehalococcoides sp. VS] Length = 365 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 2/47 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHI 47 + A ++GVPQRRERL I L V F + D + Sbjct: 167 LDAGNYGVPQRRERLIYIASLGEKVRFA--KRSKRLKTVRDAIACLP 211 >gi|218460006|ref|ZP_03500097.1| DNA-cytosine methyltransferase [Rhizobium etli Kim 5] Length = 343 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 8/52 (15%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFP-------TPLGIKPRLGDILEEHI 47 A DFG+PQ R R+ I+ + P + D+L Sbjct: 202 AEDFGIPQARHRVIIVGVRRDIAS-RLPHWFSPRLKKSERIVTVADVLSNMP 252 >gi|196048102|ref|ZP_03115280.1| type II DNA-methyltransferase, putative [Bacillus cereus 03BB108] gi|196021358|gb|EDX60087.1| type II DNA-methyltransferase, putative [Bacillus cereus 03BB108] Length = 464 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 10/100 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A DFG +R R Y + F + F+FP+P R L E++D K+ I W Sbjct: 263 IDAVDFGSIAKRNRTYAVAFRSEEAFLNFEFPSPPRTVKRSK--LREYLDGKNVI--HQW 318 Query: 59 EGHQKRKENNKIAGKGFGYGL----FFENSATTNTLSARY 94 + + ++ + L ++ + RY Sbjct: 319 KDLRTWMDSFQSRSAFKDRNLIKTFVTPDAKEIQCILGRY 358 >gi|319787207|ref|YP_004146682.1| DNA-cytosine methyltransferase [Pseudoxanthomonas suwonensis 11-1] gi|317465719|gb|ADV27451.1| DNA-cytosine methyltransferase [Pseudoxanthomonas suwonensis 11-1] Length = 443 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 11/64 (17%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFP-----------TPLGIKPRLGDILEEHIDD 49 + A ++GVPQ R+RL+++ +P L P D L + D Sbjct: 155 LNAYEYGVPQDRQRLFLLGCKQGLRVPVYPGAITSRPGAVGADLPSAPTCQDALGDLPDA 214 Query: 50 KSTI 53 + + Sbjct: 215 ERYV 218 >gi|119513855|ref|ZP_01632813.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia spumigena CCY9414] gi|119461493|gb|EAW42572.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia spumigena CCY9414] Length = 318 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 2/34 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 + A +G+PQ R R + + L+ S FP P Sbjct: 155 LNAAHYGIPQTRSRAFFLASLDNS--LHFPEPTN 186 >gi|57164173|ref|NP_001009473.1| DNA (cytosine-5)-methyltransferase 1 [Ovis aries] gi|29536011|gb|AAO39704.1| DNA (cytosine-5)-methyltransferase 1 [Ovis aries] Length = 1611 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1296 LQAGQYGVAQTRRRAIILAAAPGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1350 >gi|57867437|ref|YP_189088.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis RP62A] gi|57638095|gb|AAW54883.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis RP62A] Length = 335 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 3/78 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLN--PSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A + G Q+R+RL+ I + +F+F L LE + D + + Sbjct: 152 LNAHELGSAQKRKRLFSISIRKDIDNGKFEFLDLTREPKHLETYLENN-DQPDIANEHIH 210 Query: 59 EGHQKRKENNKIAGKGFG 76 K+ N K Sbjct: 211 SHLILGKDENGYKIKNGT 228 >gi|148225023|ref|NP_001084021.1| DNA (cytosine-5-)-methyltransferase 1 [Xenopus laevis] gi|1731732|dbj|BAA11458.1| DNA (cytosine-5-)-methyltransferase [Xenopus laevis] Length = 1490 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R ++ FP PL + L +D+K +SN Sbjct: 1174 LQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACTLSVVVDEKKYVSN 1228 >gi|315583643|pdb|3PT6|A Chain A, Crystal Structure Of Mouse Dnmt1(650-1602) In Complex With Dna gi|315583644|pdb|3PT6|B Chain B, Crystal Structure Of Mouse Dnmt1(650-1602) In Complex With Dna Length = 954 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 654 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 708 >gi|156739999|gb|ABU93584.1| DNA cytosine 5-methyltransferase 1 [Ovis aries] Length = 1572 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1266 LQAGQYGVAQTRRRAIILAAAPGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1320 >gi|168805279|gb|ACA28713.1| DNA methyltransferase b [Bos taurus] Length = 1348 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1015 LQAGQYGVAQTRRRAIILAAAPGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1069 >gi|91203606|emb|CAJ71259.1| similar to HhaI Dna (cytosine-C5-)-methyltransferase [Candidatus Kuenenia stuttgartiensis] Length = 416 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKF 29 A +FGV Q R+R+ II + F F Sbjct: 193 AKEFGVLQNRKRVIIIGWKKDL-NFSF 218 >gi|315583650|pdb|3PTA|A Chain A, Crystal Structure Of Human Dnmt1(646-1600) In Complex With Dna Length = 956 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 655 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 709 >gi|301609669|ref|XP_002934384.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Xenopus (Silurana) tropicalis] Length = 1492 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R ++ FP PL + L +D+K +SN Sbjct: 1176 LQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACSLSVVVDEKKYVSN 1230 >gi|282849501|ref|ZP_06258885.1| C-5 cytosine-specific DNA methylase [Veillonella parvula ATCC 17745] gi|282580438|gb|EFB85837.1| C-5 cytosine-specific DNA methylase [Veillonella parvula ATCC 17745] Length = 294 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 7/67 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPR------LGDILEEHIDDKSTI 53 + + +G +RERL I+ N + F++P P + D+L Sbjct: 92 LNSAWYGAATKRERLIIVAIRNDVEDIFEYPQPQYMDQSIYKSGLDRDLLNLPSPKTVND 151 Query: 54 SNKLWEG 60 + KL + Sbjct: 152 ALKLVDY 158 >gi|157953197|ref|YP_001498088.1| hypothetical protein AR158_C006R [Paramecium bursaria Chlorella virus AR158] gi|156067845|gb|ABU43552.1| hypothetical protein AR158_C006R [Paramecium bursaria Chlorella virus AR158] Length = 333 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 32/108 (29%), Gaps = 20/108 (18%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEE------HIDDKSTISNKLWE 59 F +PQRR+R+ F + FP P ++ LE +D +KL + Sbjct: 155 FCIPQRRKRVIFFCFKHTMP-ISFPEPTTDVIKIRPFLENVSSGCVPYNDILISQDKLIQ 213 Query: 60 GH------QKRKENNKIAGKGFGYGLFFEN-------SATTNTLSARY 94 K YG T T++ Y Sbjct: 214 TLDANDHKPHPMLMKLTNEKRITYGKRTPTSGEAIDIDKPTKTIACSY 261 >gi|115386470|ref|XP_001209776.1| predicted protein [Aspergillus terreus NIH2624] gi|114190774|gb|EAU32474.1| predicted protein [Aspergillus terreus NIH2624] Length = 597 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 16/38 (42%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 + D+GVPQ R+RL +I P P R Sbjct: 438 LNCIDYGVPQSRKRLVVIASGPGERLPPLPRPTHGPRR 475 >gi|37728049|gb|AAO44952.1| cytosine-5-methyltransferase [Bos taurus] Length = 1611 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1296 LQAGQYGVAQTRRRAIILAAAPGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1350 >gi|325126553|gb|ADY85883.1| DNA-cytosine methyltransferase family protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 380 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 4/39 (10%) Query: 6 FGVPQRRERLYIIDFLNPS-VEF---KFPTPLGIKPRLG 40 +GVPQ R R+ I+ N V+F + P P P Sbjct: 167 YGVPQMRHRIIIVGIRNDLAVKFIMSQLPAPTTPNPSNY 205 >gi|148555450|ref|YP_001263032.1| DNA-cytosine methyltransferase [Sphingomonas wittichii RW1] gi|148500640|gb|ABQ68894.1| DNA-cytosine methyltransferase [Sphingomonas wittichii RW1] Length = 400 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 32/100 (32%), Gaps = 3/100 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID--DKSTISNKLW 58 + A G+PQ+R RL++I + + P PL G +L + Sbjct: 240 LDAAQHGIPQQRFRLFVIGSRTGNEYYP-PAPLNYVVGSGSVLFRSTAGVPNNETREHRA 298 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 + A G + + T+ A K G Sbjct: 299 GSLLRYMRLGYGARDQLGRVDRLDPKLPSKTVIAGGTKGG 338 >gi|325270632|ref|ZP_08137230.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM 16608] gi|324987027|gb|EGC19012.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM 16608] Length = 283 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 14/27 (51%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKF 29 A D+GVPQ R R+ II F F Sbjct: 55 AKDYGVPQSRYRVLIIGTERNLPTFDF 81 >gi|315583649|pdb|3PT9|A Chain A, Crystal Structure Of Mouse Dnmt1(731-1602) In The Free State Length = 873 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 573 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 627 >gi|297276085|ref|XP_001104704.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Macaca mulatta] Length = 1280 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 963 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1017 >gi|121582518|ref|YP_974050.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42] gi|120608576|gb|ABM44315.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42] Length = 304 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 31/101 (30%), Gaps = 9/101 (8%) Query: 2 KACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 A D GVPQ R+RL+++ + P + H + + Sbjct: 142 DAADHGVPQNRQRLFLVCTRSRRPLRLSLPRREHRPIADVIQWDAHPWSPIVTPRRSDKT 201 Query: 61 HQKRKENNKIAGKGF-------GYGLFFEN-SATTNTLSAR 93 ++ G F G GL + T++ R Sbjct: 202 LRQIAAGRAAHGDRFLIPYYSSGSGLTGRSIHRPVGTITTR 242 >gi|89055380|ref|YP_510831.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1] gi|88864929|gb|ABD55806.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1] Length = 373 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 7/80 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG------IKPRLGDILEEHIDDKSTIS 54 ++A D+GVPQ R R+ I + P P ++ D + + + + Sbjct: 153 LRAEDYGVPQERRRVVFIGNRVGAP-ISHPEPTHGPGRANPFTKIRDAIGDLPPLDNGEN 211 Query: 55 NKLWEGHQKRKENNKIAGKG 74 R + +G Sbjct: 212 PGRVAYADARPSKYQRQMRG 231 >gi|218847945|ref|YP_002454784.1| type II DNA-methyltransferase, putative [Bacillus cereus G9842] gi|218546076|gb|ACK98469.1| type II DNA-methyltransferase, putative [Bacillus cereus G9842] Length = 463 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 10/98 (10%) Query: 3 ACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 A D+G RR R Y + F +F+FP+P R L+ +D K ++ W+ Sbjct: 263 AYDYGSIARRNRTYALAFRTKEAFLDFQFPSPPRTIKRPK--LKVFLDGKD--TDHEWKD 318 Query: 61 HQKRKENNKIAGKGFGYGL----FFENSATTNTLSARY 94 + K++ + L ++ + +RY Sbjct: 319 FKAWKKSFESRDAFKNRSLEKSFVTPDAKEIQCILSRY 356 >gi|317108162|ref|NP_872592.2| DNA (cytosine-5)-methyltransferase 1 [Bos taurus] gi|108935977|sp|Q24K09|DNMT1_BOVIN RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1 gi|89994055|gb|AAI14064.1| DNA (cytosine-5-)-methyltransferase 1 [Bos taurus] gi|296485884|gb|DAA27999.1| DNA (cytosine-5)-methyltransferase 1 [Bos taurus] Length = 1611 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1296 LQAGQYGVAQTRRRAIILAAAPGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1350 >gi|41584550|gb|AAS09913.1| BsmBI M1-M2 methyltransferase fusion protein [Geobacillus stearothermophilus] Length = 1068 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 3/33 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPL 33 + A +GVPQ R+R++I+ + P P Sbjct: 947 LSAEQYGVPQMRKRVFIVAAKKGL---ELPKPP 976 >gi|222840488|gb|ACM68681.1| DNA methyltransferase 1 [Capra hircus] Length = 1420 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1223 LQAGQYGVAQTRRRAIILAAAPGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1277 >gi|182765469|ref|NP_001116832.1| hypothetical protein LOC100036795 [Xenopus laevis] gi|171846414|gb|AAI61682.1| LOC100036795 protein [Xenopus laevis] Length = 1492 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R ++ FP PL + L +D+K +SN Sbjct: 1176 LQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACSLGVVVDEKKYVSN 1230 >gi|114675314|ref|XP_001163550.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase (EC 2.1.1.37) - human isoform 5 [Pan troglodytes] Length = 1280 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 963 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1017 >gi|6684525|gb|AAF23609.1| DNA (cytosine-5)-methyltransferase [Homo sapiens] Length = 1280 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 963 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1017 >gi|22256926|sp|O33481|MTP1_PSYTA RecName: Full=Modification methylase PspPI; Short=M.PspPI; AltName: Full=Cytosine-specific methyltransferase PspPI gi|2558610|emb|CAA68841.1| type II DNA m5C-methyltransferase [Psychrobacter sp.] Length = 416 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 3/79 (3%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 KA + VPQ+RERL II + ++ P+P + D L+ + Sbjct: 222 KAIFYKVPQKRERLIIIGVRTDLYDKLAYEKPSPYYKVLTVADALKAGELYDVDVPESTG 281 Query: 59 EGHQKRKENNKIAGKGFGY 77 + + +RK GY Sbjct: 282 QLYPERKAEIMSYVPEGGY 300 >gi|321469202|gb|EFX80183.1| hypothetical protein DAPPUDRAFT_346987 [Daphnia pulex] Length = 1400 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 23/58 (39%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 ++A ++GV Q R R +I +P P + R G L + SN W Sbjct: 1085 LQAGNYGVSQTRRRAFIFAAAPGEKLPLYPEPTHVFSRRGCQLSVAVGRDKFYSNCRW 1142 >gi|332138119|pdb|3AV4|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 gi|332138120|pdb|3AV5|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 With Adohcy gi|332138121|pdb|3AV6|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 With Adomet Length = 1330 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1012 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1066 >gi|328543334|ref|YP_004303443.1| DNA methylase, C-5 cytosine-specific family [polymorphum gilvum SL003B-26A1] gi|326415695|gb|ADZ72758.1| DNA methylase, C-5 cytosine-specific family [Polymorphum gilvum SL003B-26A1] Length = 418 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 16/34 (47%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 + A +FG PQ R R++I+ + P P Sbjct: 172 LSAEEFGTPQLRRRVFIVASRIGAASELLPNPTH 205 >gi|317051620|ref|YP_004112736.1| DNA-cytosine methyltransferase [Desulfurispirillum indicum S5] gi|316946704|gb|ADU66180.1| DNA-cytosine methyltransferase [Desulfurispirillum indicum S5] Length = 306 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 28/100 (28%), Gaps = 16/100 (16%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + D GVPQ R RL+++ + + KFP+ S W Sbjct: 143 IDCADLGVPQNRIRLFLVCTRSRVPLHLKFPSKNHQPASSF----------IDFSAGNWS 192 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGS 99 + + + YYK GS Sbjct: 193 PILRPTRAAATLARVANGRREYGERFVMP-----YYKSGS 227 >gi|148693194|gb|EDL25141.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_c [Mus musculus] Length = 1683 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1365 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1419 >gi|308069782|ref|YP_003871387.1| Site-specific DNA methylase [Paenibacillus polymyxa E681] gi|305859061|gb|ADM70849.1| Site-specific DNA methylase [Paenibacillus polymyxa E681] Length = 204 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 4/47 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHI 47 + + GVPQ+RER++ I FP PL ++ +L + I Sbjct: 113 LNSATMGVPQKRERVFFIAAREDLP---FP-PLRLEFNDPPVLYKDI 155 >gi|290960099|ref|YP_003491281.1| hypothetical protein SCAB_57141 [Streptomyces scabiei 87.22] gi|260649625|emb|CBG72740.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 414 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 37/113 (32%), Gaps = 18/113 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-----VEFKFP-TPLGIKPRLGDILEEHIDDKSTIS 54 M A FGVPQ R R ++ V+F +P G + + D L ++ + Sbjct: 176 MDANRFGVPQLRPRAILVAIRKDVLASSGVDFLWPLQLEGKRATVVDELAASMEARCR-- 233 Query: 55 NKLWEGHQK--RKENNKIAGKG-------FGYGLFFENSATTNTLSARYYKDG 98 K W ++ R + +GK TL K G Sbjct: 234 -KFWNKNKDGERARPGEPSGKHVYQEWLRKATDAVEAGKGIAPTLVGGSRKHG 285 >gi|31074161|gb|AAP20551.1| DNA cytosine-5 methyltransferase 1 [Bos taurus] Length = 1611 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1296 LQAGQYGVAQTRRRAIILAAAPGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1350 >gi|307544701|ref|YP_003897180.1| C-5 cytosine-specific DNA methylase [Halomonas elongata DSM 2581] gi|307216725|emb|CBV41995.1| C-5 cytosine-specific DNA methylase [Halomonas elongata DSM 2581] Length = 523 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 ++ACD+G P R RL+++ + +P P P Sbjct: 172 LRACDYGAPTIRRRLFLVARRDGLP-IVWPKPTHADP 207 >gi|302694677|ref|XP_003037017.1| hypothetical protein SCHCODRAFT_103476 [Schizophyllum commune H4-8] gi|300110714|gb|EFJ02115.1| hypothetical protein SCHCODRAFT_103476 [Schizophyllum commune H4-8] Length = 1190 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 14/38 (36%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 M+A +G PQ R R +++ P P Sbjct: 889 MQAGHYGAPQHRVRFFVVAAKQGVPLPDLPQPTHDFTT 926 >gi|331082114|ref|ZP_08331242.1| hypothetical protein HMPREF0992_00166 [Lachnospiraceae bacterium 6_1_63FAA] gi|330405709|gb|EGG85239.1| hypothetical protein HMPREF0992_00166 [Lachnospiraceae bacterium 6_1_63FAA] Length = 523 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 34/108 (31%), Gaps = 13/108 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + + F VPQ RER+Y I L K G L + +++ +++++ Sbjct: 174 INSKWF-VPQNRERIYTIGHLRRYGSRKILPVTGTNGENSICLIGCKEGRNSQRDRIYDY 232 Query: 61 H------------QKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 + G + TL ARY K Sbjct: 233 TGISPTVSTCPGGNTEPKMGLPCFVDTSCGTGIRLTKEARTLQARYNK 280 >gi|114675316|ref|XP_001163475.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase (EC 2.1.1.37) - human isoform 3 [Pan troglodytes] Length = 1036 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 719 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 773 >gi|73986989|ref|XP_533919.2| PREDICTED: similar to DNA (cytosine-5)-methyltransferase 1 (Dnmt1) (DNA methyltransferase HsaI) (DNA MTase HsaI) (MCMT) (M.HsaI) [Canis familiaris] Length = 1645 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1330 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1384 >gi|312902260|ref|ZP_07761468.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0635] gi|310634319|gb|EFQ17602.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0635] Length = 359 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 37/117 (31%), Gaps = 17/117 (14%) Query: 1 MKACDFGVPQRRERLYIID----FLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + + +GVPQRR R++++ F + F D +++ K Sbjct: 174 LDSQYWGVPQRRRRIFLVADFRDFRAREILFDTQGMQSHLETCDQNRLSSPKDNRSLTTK 233 Query: 57 LWEGHQKR-------KENNKIAGKGFGYGLFFENSATTNTLSAR------YYKDGSE 100 + K F +++ TL A Y+++G E Sbjct: 234 AGRQLFLYPFQERRMRTYAKEKNTKGFVSSFGQSTDPFPTLLAGTVDTFAYWQEGFE 290 >gi|238762744|ref|ZP_04623713.1| site-specific DNA methylase [Yersinia kristensenii ATCC 33638] gi|238699049|gb|EEP91797.1| site-specific DNA methylase [Yersinia kristensenii ATCC 33638] Length = 605 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 ++A D+G P R+R +++ +P P P+ D+ Sbjct: 176 LRASDYGAPTIRKRFFMV-MRCDGKPVVWPEPTHGDPKSLDV 216 >gi|74151181|dbj|BAE27713.1| unnamed protein product [Mus musculus] Length = 1619 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1301 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1355 >gi|134288503|ref|YP_001110666.1| C-5 cytosine-specific DNA methylase [Burkholderia vietnamiensis G4] gi|134133153|gb|ABO59863.1| C-5 cytosine-specific DNA methylase [Burkholderia vietnamiensis G4] Length = 586 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 2/53 (3%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHIDDKSTIS 54 A D+G P RERL++I + +P P P+ G + + S Sbjct: 214 AADYGAPTTRERLFMIARRDGRP-IVWPKPTHFKVPKPGQLKWRAAAEAIDFS 265 >gi|257466255|ref|ZP_05630566.1| DNA-cytosine methyltransferase [Fusobacterium gonidiaformans ATCC 25563] gi|315917413|ref|ZP_07913653.1| DNA-cytosine methyltransferase [Fusobacterium gonidiaformans ATCC 25563] gi|313691288|gb|EFS28123.1| DNA-cytosine methyltransferase [Fusobacterium gonidiaformans ATCC 25563] Length = 407 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 26/98 (26%), Gaps = 13/98 (13%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFK-------------FPTPLGIKPRLGDILEEHID 48 A +GVPQRR+R+ ++ P + +G+ +++ Sbjct: 188 DASKYGVPQRRKRVILLGVRKDLDSLNSIYDKIDDFYNVILPKYQQKEVTVGEAIDDLPK 247 Query: 49 DKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSAT 86 K + I Y + Sbjct: 248 ISPIWDEKKRTNKKAYTYQEGINWHIPRYHNLRDMDIY 285 >gi|281420885|ref|ZP_06251884.1| modification methylase DdeI [Prevotella copri DSM 18205] gi|281405177|gb|EFB35857.1| modification methylase DdeI [Prevotella copri DSM 18205] Length = 624 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 14/23 (60%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + + ++GVPQ RER+ I N Sbjct: 365 LLSSNYGVPQNRERVVFIGCRND 387 >gi|148693197|gb|EDL25144.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_f [Mus musculus] Length = 1638 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1320 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1374 >gi|148693193|gb|EDL25140.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_b [Mus musculus] Length = 1645 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1327 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1381 >gi|327180732|ref|NP_001186360.2| DNA (cytosine-5)-methyltransferase 1 isoform 1 [Mus musculus] gi|20141336|sp|P13864|DNMT1_MOUSE RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1; Short=Met-1; AltName: Full=DNA methyltransferase MmuI; Short=DNA MTase MmuI; Short=M.MmuI; AltName: Full=MCMT gi|6625687|gb|AAF19352.1| DNA methyltransferase [Mus musculus] gi|37574019|gb|AAH48148.2| DNA methyltransferase (cytosine-5) 1 [Mus musculus] Length = 1620 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1302 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1356 >gi|281337410|gb|EFB12994.1| hypothetical protein PANDA_010327 [Ailuropoda melanoleuca] Length = 1576 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1259 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1313 >gi|240143787|ref|ZP_04742388.1| Phi-3T prophage-derived modification methylase Phi3TI [Roseburia intestinalis L1-82] gi|257204222|gb|EEV02507.1| Phi-3T prophage-derived modification methylase Phi3TI [Roseburia intestinalis L1-82] Length = 333 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 34/108 (31%), Gaps = 17/108 (15%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE-FKFP---TPLGIKPRLGDILEEHIDDKSTISNKL 57 + + V Q RER YI + + + P P+L L++++ ++ I N+ Sbjct: 180 NSKFWNVAQNRERYYIAATRDDLPDVLQMPAQNEDPENVPKLSLFLDDNVPERFYIPNEK 239 Query: 58 WEGHQ-------------KRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + K ++ TL+A Sbjct: 240 AQKIIEQALKRLETLGKVHATITPDRIEKRQNGRRAKDDEDPMFTLTA 287 >gi|327180734|ref|NP_034196.5| DNA (cytosine-5)-methyltransferase 1 isoform 2 [Mus musculus] Length = 1619 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1301 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1355 >gi|31419356|gb|AAH53047.1| Dnmt1 protein [Mus musculus] Length = 1627 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1309 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1363 >gi|332253285|ref|XP_003275776.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 1 [Nomascus leucogenys] gi|332253287|ref|XP_003275777.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 2 [Nomascus leucogenys] gi|332253289|ref|XP_003275778.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 3 [Nomascus leucogenys] Length = 1347 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1030 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1084 >gi|254467075|ref|ZP_05080486.1| DNA-cytosine methyltransferase [Rhodobacterales bacterium Y4I] gi|206687983|gb|EDZ48465.1| DNA-cytosine methyltransferase [Rhodobacterales bacterium Y4I] Length = 497 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 14/24 (58%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS 24 ++A D+GVPQ R R+ I+ Sbjct: 228 IRAEDYGVPQARHRVIILGIRKDL 251 >gi|108805045|ref|YP_644982.1| DNA (cytosine-5-)-methyltransferase [Rubrobacter xylanophilus DSM 9941] gi|108766288|gb|ABG05170.1| DNA (cytosine-5-)-methyltransferase [Rubrobacter xylanophilus DSM 9941] Length = 405 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 10/102 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT---PLGIKPRLGDILEEHIDDKSTISN-- 55 ++A ++GVPQRR R+ ++ + VE + P LG L + L + + +S+ Sbjct: 304 LRAEEYGVPQRRTRVILVGDSSGDVESEPPKTVTQLGNNMSLFNELPAAVSVRDALSDLP 363 Query: 56 ----KLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 H+ + + + F GL L+ R Sbjct: 364 ALRPGEDGSHKDYTHDPEHPYQEFVRGLIGP-EEYLRALNDR 404 >gi|301772046|ref|XP_002921451.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1-like [Ailuropoda melanoleuca] Length = 1676 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1359 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1413 >gi|260890544|ref|ZP_05901807.1| hypothetical protein GCWU000323_01722 [Leptotrichia hofstadii F0254] gi|260859786|gb|EEX74286.1| site-specific DNA-methyltransferase [Leptotrichia hofstadii F0254] Length = 425 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPL 33 + + +G +RERL I+ N +EF FP P Sbjct: 203 LNSAWYGAATKRERLIIVAVKNEIDIEFNFPKPK 236 >gi|148693195|gb|EDL25142.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_d [Mus musculus] Length = 1619 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1301 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1355 >gi|148693196|gb|EDL25143.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_e [Mus musculus] Length = 1604 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1286 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1340 >gi|20137608|sp|Q9Z330|DNMT1_RAT RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1; AltName: Full=DNA MTase RnoIP; Short=M.RnoIP; AltName: Full=DNA methyltransferase I; AltName: Full=MCMT Length = 1622 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1304 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1358 >gi|214010196|ref|NP_445806.3| DNA (cytosine-5)-methyltransferase 1 [Rattus norvegicus] gi|149020535|gb|EDL78340.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_b [Rattus norvegicus] Length = 1621 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1303 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1357 >gi|134095045|ref|YP_001100120.1| putative modification methylase [Herminiimonas arsenicoxydans] gi|133738948|emb|CAL61995.1| Putative modification methylase AgeI (Cytosine-specific methyltransferase AgeI) [Herminiimonas arsenicoxydans] Length = 523 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 33/113 (29%), Gaps = 16/113 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHID-----DKSTIS 54 ++A ++G+PQ R R+ ++ + + D L+ K S Sbjct: 246 IRAEEYGIPQARHRVILVGVREDIDITPDVLKHASELQTVEDALQTLPHLRSRLSKQADS 305 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFEN---SATTNTLSA-------RYYKD 97 +LW + + + + + RY KD Sbjct: 306 PELWAKAVNQHLKDLRNATVNKKEMADVRIALGEYAGKIPSNLDSGALRYPKD 358 >gi|4160670|dbj|BAA37118.1| DNA cytosine 5 methyltransferase [Rattus rattus] Length = 1622 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1304 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1358 >gi|1765919|emb|CAA32910.1| DNA methyltransferase 1 [Mus musculus] Length = 1620 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1302 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1356 >gi|242780736|ref|XP_002479658.1| C-5 cytosine methyltransferase DmtA [Talaromyces stipitatus ATCC 10500] gi|218719805|gb|EED19224.1| C-5 cytosine methyltransferase DmtA [Talaromyces stipitatus ATCC 10500] Length = 611 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 18/103 (17%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQK 63 +GVPQ R RL+II FP P G L+ ++ K + Sbjct: 446 AKYGVPQLRRRLFIIAAGPGEKLPAFPVPTH-----GPGLQPYVTIKD-----AIRNIPR 495 Query: 64 RKENNKIAGKGFG---YGLFFENSATTNTLSAR-----YYKDG 98 R + + F ++ + T++ Y+ G Sbjct: 496 RADQHDPENTVFQDGRTRAPYDENTLAKTITCGGGEGNYHPSG 538 >gi|311234076|gb|ADP86930.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1] Length = 489 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 15/23 (65%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + A FGVPQRR R++++ L Sbjct: 145 LDAQYFGVPQRRRRVFVVGHLGD 167 >gi|46579926|ref|YP_010734.1| type II DNA modification methyltransferase [Desulfovibrio vulgaris str. Hildenborough] gi|46449342|gb|AAS95993.1| type II DNA modification methyltransferase, putative [Desulfovibrio vulgaris str. Hildenborough] Length = 487 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 15/23 (65%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + A FGVPQRR R++++ L Sbjct: 143 LDAQYFGVPQRRRRVFVVGHLGD 165 >gi|57505223|ref|ZP_00371152.1| cytosine specific DNA methyltransferase (BSP6IM) [Campylobacter upsaliensis RM3195] gi|57016359|gb|EAL53144.1| cytosine specific DNA methyltransferase (BSP6IM) [Campylobacter upsaliensis RM3195] Length = 326 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 4/61 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + DF + Q RER+Y I F F + L D L + D K+ Sbjct: 145 LNSLDFELAQSRERVYFIGIKEDKKCYFNF-SKNASHKDLKDFL--NPDKKNIFPKNSQS 201 Query: 60 G 60 Sbjct: 202 Y 202 >gi|322510834|gb|ADX06148.1| putative C-5 cytosine-specific DNA methyltransferase [Organic Lake phycodnavirus 1] Length = 344 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 6/62 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPL------GIKPRLGDILEEHIDDKSTIS 54 +K D+G+PQ R+RL I+ N + L + L ++L ++ + K + Sbjct: 209 IKCSDYGLPQMRKRLIIVGVRNDTALINHIDKLLDLDEYKKETTLTELLGKNFEKKIAYT 268 Query: 55 NK 56 + Sbjct: 269 IR 270 >gi|149020536|gb|EDL78341.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_c [Rattus norvegicus] Length = 1634 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1316 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1370 >gi|227431295|ref|ZP_03913348.1| DNA (cytosine-5-)-methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352888|gb|EEJ43061.1| DNA (cytosine-5-)-methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 353 Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 16/102 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG---IKPRLGDILEEHIDDKSTISNKL 57 + A D+GV Q R R II ++++ +P ++ +GD+ +K S+ Sbjct: 163 LNAKDYGVGQSRPRA-IIKLYKKNIKWPWPKQEKEISLQESIGDLPSLQPGEK---SSIK 218 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYY--KD 97 W +K + + A K G + YY KD Sbjct: 219 WHYAKKCRPQIEEALKHTATGTSALRNPV-------YYPKKD 253 >gi|212633712|ref|YP_002310237.1| site-specific DNA-methyltransferase [Shewanella piezotolerans WP3] gi|212555196|gb|ACJ27650.1| Site-specific DNA-methyltransferase [Shewanella piezotolerans WP3] Length = 475 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 6/41 (14%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 + +FG PQ RER+ II + P + P + Sbjct: 245 NSANFGTPQIRERVIIICSRDGV------KPPYLVPTHSEF 279 >gi|114675312|ref|XP_001163590.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 6 [Pan troglodytes] Length = 1519 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1202 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1256 >gi|20068989|gb|AAM09642.1|AF458983_2 m6 adenine and m5 cytosine DNA methyltransferase [Hafnia alvei] Length = 1061 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 21/37 (56%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 + + +GVPQ R R++++ + +++ P P+ + Sbjct: 974 LCSEQYGVPQMRRRIFVVATTDDTIDLSEPAPIYERC 1010 >gi|313661499|ref|NP_001186362.1| DNA (cytosine-5)-methyltransferase 1 isoform 4 [Mus musculus] gi|7339827|gb|AAF60965.1| DNA methyltransferase [Mus musculus] gi|9719249|gb|AAF97695.1| DNA (cytosine-5)-methyltransferase [Mus musculus] gi|148693192|gb|EDL25139.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_a [Mus musculus] gi|148693198|gb|EDL25145.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_a [Mus musculus] Length = 1502 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1184 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1238 >gi|313661497|ref|NP_001186361.1| DNA (cytosine-5)-methyltransferase 1 isoform 3 [Mus musculus] Length = 1501 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1183 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1237 >gi|209525992|ref|ZP_03274525.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209493518|gb|EDZ93840.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 430 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 7/82 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP-------RLGDILEEHIDDKSTI 53 + A ++G PQ+R+RL +I ++P + + ++ + I Sbjct: 170 LDASEYGAPQKRKRLILIGSRFDVKIAEYPATNKSEMFTVYQAISDLEKIDNFTNYDPGI 229 Query: 54 SNKLWEGHQKRKENNKIAGKGF 75 S E RK+ + + F Sbjct: 230 SPAFLEYEGDRKKYSLVPSDSF 251 >gi|2689716|gb|AAC40061.1| DNA (cytosine-5)-methyltransferase [Mus musculus] Length = 1502 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1184 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1238 >gi|257867242|ref|ZP_05646895.1| DNA-cytosine methyltransferase [Enterococcus casseliflavus EC30] gi|257873577|ref|ZP_05653230.1| DNA-cytosine methyltransferase [Enterococcus casseliflavus EC10] gi|257801298|gb|EEV30228.1| DNA-cytosine methyltransferase [Enterococcus casseliflavus EC30] gi|257807741|gb|EEV36563.1| DNA-cytosine methyltransferase [Enterococcus casseliflavus EC10] Length = 373 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 37/117 (31%), Gaps = 17/117 (14%) Query: 1 MKACDFGVPQRRERLYIID----FLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + + +GVPQRR R++++ F + F D +++ K Sbjct: 188 LDSQYWGVPQRRRRIFLVADFRDFRAREILFDTQGMQSHLETCDQNRLSSPKDNRSLTTK 247 Query: 57 LWEGHQKR-------KENNKIAGKGFGYGLFFENSATTNTLSAR------YYKDGSE 100 + K F +++ TL A Y+++G E Sbjct: 248 AGRQLFLYPFQERRMRTYAKEKNTKGFVSSFGQSTDPFPTLLAGTVDTFAYWQEGFE 304 >gi|328947595|ref|YP_004364932.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] gi|328447919|gb|AEB13635.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] Length = 476 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 28/96 (29%), Gaps = 16/96 (16%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 A ++G PQ+RER+ + + P D K ++ Sbjct: 246 NAANYGAPQKRERVVFFCSRDG-------EKVPYLPPTNDEFGNFGLPKWRTVREVLSDL 298 Query: 62 QKRKENNKIAGKGFGYGLFFENSATTNTLSAR-YYK 96 ++ ++ F L A Y+K Sbjct: 299 KE----DEQKAMKFPEKRL----KYFRMLKAGQYWK 326 >gi|326564851|gb|EGE15057.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 103P14B1] Length = 288 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 16/29 (55%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF 29 + + FGVPQ+R R++++ L F Sbjct: 160 LDSRYFGVPQKRRRVFLVAGLGKYPPFSL 188 >gi|332852917|ref|XP_512361.3| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 11 [Pan troglodytes] Length = 1632 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1315 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1369 >gi|317501747|ref|ZP_07959934.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium 8_1_57FAA] gi|316896869|gb|EFV18953.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium 8_1_57FAA] Length = 499 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 3/79 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH-IDDKSTISNKLWE 59 + + FG+PQ R+R+YI+ L+ + LG++LE +S + KL++ Sbjct: 219 IDSQYFGLPQSRKRVYIVGMLDAKINLD--NFEKKTVTLGEVLEHGLPTVESNFTKKLFK 276 Query: 60 GHQKRKENNKIAGKGFGYG 78 + + K G Sbjct: 277 NYTPEEVVGKSIKDKRGGE 295 >gi|296232860|ref|XP_002807840.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1-like [Callithrix jacchus] Length = 1678 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1361 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1415 >gi|195927037|ref|NP_001124295.1| DNA (cytosine-5)-methyltransferase 1 isoform a [Homo sapiens] gi|116496659|gb|AAI26228.1| DNMT1 protein [Homo sapiens] gi|219521538|gb|AAI44094.1| DNA (cytosine-5-)-methyltransferase 1 [Homo sapiens] Length = 1632 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1315 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1369 >gi|297703536|ref|XP_002828696.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1-like [Pongo abelii] Length = 1664 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1347 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1401 >gi|149020534|gb|EDL78339.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Rattus norvegicus] Length = 1503 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1185 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1239 >gi|228950284|ref|ZP_04112461.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228809446|gb|EEM55890.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 346 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 11/103 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNP----SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A G+PQRRER++ I +++ F + I+ K+ + Sbjct: 181 LNAATMGIPQRRERIFFIARQKELSLPNLQLSFNEVPIPYGDIRSGKGNPINPKTKTYRR 240 Query: 57 LWEGHQ------KRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + + F +F +N TL+A Sbjct: 241 WLKRIPTDKNMGDISKRIEGKDNNFNT-VFVKNQEVPPTLTAG 282 >gi|4503351|ref|NP_001370.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Homo sapiens] gi|12231019|sp|P26358|DNMT1_HUMAN RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1; AltName: Full=CXXC-type zinc finger protein 9; AltName: Full=DNA methyltransferase HsaI; Short=DNA MTase HsaI; Short=M.HsaI; AltName: Full=MCMT gi|1632819|emb|CAA45219.1| DNA (cytosine-5-)-methyltransferase [Homo sapiens] Length = 1616 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1299 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1353 >gi|269941524|emb|CBI49922.1| phage C-5 cytosine-specific DNA methylase [Staphylococcus aureus subsp. aureus TW20] Length = 332 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 3/78 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLN--PSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A + G Q+R+RL+ I + +F+F L LE + D + + Sbjct: 149 LNAHELGSAQKRKRLFSISIRKDIDNGKFEFLDLTREPKHLETYLENN-DQPDIANEHIH 207 Query: 59 EGHQKRKENNKIAGKGFG 76 K+ N K Sbjct: 208 SHLILGKDENDYKIKNGT 225 >gi|303245411|ref|ZP_07331695.1| DNA-cytosine methyltransferase [Desulfovibrio fructosovorans JJ] gi|302493260|gb|EFL53122.1| DNA-cytosine methyltransferase [Desulfovibrio fructosovorans JJ] Length = 490 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIK 36 + + +GVP+ RER ++I + E +FP P Sbjct: 188 LNSVHYGVPEMRERAFLIGYAAGIAERIRFPEPTRRH 224 >gi|161789274|ref|YP_001595753.1| methyl transferase [Vibrio sp. 09022] gi|161761495|gb|ABX77139.1| methyl transferase [Vibrio sp. 09022] Length = 421 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 1/42 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 + +FG PQ RER+ II + + + P + ++ Sbjct: 173 NSANFGTPQVRERVVIIASRDGK-KLPYLVPTHSETGSHNLP 213 >gi|119604485|gb|EAW84079.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Homo sapiens] gi|119604486|gb|EAW84080.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Homo sapiens] Length = 1678 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1361 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1415 >gi|114675304|ref|XP_001163764.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 10 [Pan troglodytes] Length = 1678 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1361 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1415 >gi|62088406|dbj|BAD92650.1| DNA (cytosine-5-)-methyltransferase 1 variant [Homo sapiens] Length = 1606 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1286 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1340 >gi|190571759|ref|YP_001966438.1| M2.LlaJI [Lactococcus lactis] gi|46487640|gb|AAS99178.1| M2.LlaJI [Lactococcus lactis] Length = 379 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 2/73 (2%) Query: 3 ACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 A D GVPQ RER + ++ ++FP + L D + + + + Sbjct: 160 AKDHGVPQLRERNIFLLVRKDINLSWEFPKKQK-EITLRDAIGNLPSLDPLLRDGYEKTI 218 Query: 62 QKRKENNKIAGKG 74 +K + +G Sbjct: 219 EKFPDYEVKKSEG 231 >gi|311896967|dbj|BAJ29375.1| putative DNA methyltransferase [Kitasatospora setae KM-6054] Length = 676 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 2/47 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID 48 A +GVPQ R+RL ++ N +F + P L + + + Sbjct: 215 DAWRYGVPQHRKRLILLA-RNDVEQFDW-EPDQEPVTLREAIADLPP 259 >gi|251795624|ref|YP_003010355.1| C-5 cytosine-specific DNA methylase [Paenibacillus sp. JDR-2] gi|247543250|gb|ACT00269.1| C-5 cytosine-specific DNA methylase [Paenibacillus sp. JDR-2] Length = 558 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 ++ACD+G P R+R +++ +P P P ++ Sbjct: 165 LRACDYGAPTIRKRFFLVA-RCDGKPIVWPKPTHGDPNSIEV 205 >gi|168277642|dbj|BAG10799.1| DNA (cytosine-5)-methyltransferase 1 [synthetic construct] Length = 1498 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1178 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1232 >gi|114675302|ref|XP_001163722.1| PREDICTED: DNA (cytosine-5-)-methyltransferase 1 isoform 9 [Pan troglodytes] Length = 1671 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1354 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1408 >gi|114675308|ref|XP_001163659.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase (EC 2.1.1.37) - human isoform 7 [Pan troglodytes] gi|114675310|ref|XP_001163694.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase (EC 2.1.1.37) - human isoform 8 [Pan troglodytes] Length = 1495 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1178 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1232 >gi|62204780|gb|AAH92517.1| DNMT1 protein [Homo sapiens] Length = 1511 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1194 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1248 >gi|153868905|ref|ZP_01998633.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS] gi|152074513|gb|EDN71359.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS] Length = 418 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 31/96 (32%), Gaps = 10/96 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI---------LEEHIDDKS 51 + A +GVPQ R R + P VE KFP PL + + + Sbjct: 181 LFAGHYGVPQMRFRTIFLAIHLPDVEIKFPEPLYNAKAVANFTGAKELCLDVLPLFSQSL 240 Query: 52 TISNKLWEGHQ-KRKENNKIAGKGFGYGLFFENSAT 86 +W+ K + + YG + S Sbjct: 241 KPQTSVWDAISDMPKIESGEKNEKIKYGSPYPKSEY 276 >gi|186476672|ref|YP_001858142.1| C-5 cytosine-specific DNA methylase [Burkholderia phymatum STM815] gi|184193131|gb|ACC71096.1| C-5 cytosine-specific DNA methylase [Burkholderia phymatum STM815] Length = 535 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 ++ACDFG P R+RL+++ + +PTP P+ Sbjct: 173 LRACDFGAPTIRKRLFLVA-RRDHLPIVWPTPTHGDPK 209 >gi|316934943|ref|YP_004109925.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1] gi|315602657|gb|ADU45192.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1] Length = 495 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLN-PSVEFKFPT 31 + + GVPQ R+R++++ F + +FP Sbjct: 192 LNSAHHGVPQMRDRVFLLAFHKSIEADIRFPK 223 >gi|114675320|ref|XP_001163398.1| PREDICTED: DNA (cytosine-5-)-methyltransferase 1 isoform 2 [Pan troglodytes] Length = 1546 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1354 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1408 >gi|114675318|ref|XP_001163512.1| PREDICTED: DNA (cytosine-5-)-methyltransferase 1 isoform 4 [Pan troglodytes] Length = 1632 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1354 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1408 >gi|34451616|gb|AAQ72364.1| methylase fusion protein [Geobacillus stearothermophilus] Length = 1007 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 11/64 (17%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK---FPTPLGIKP--------RLGDILEEHIDD 49 + + D+ VPQ+R+R++II + FPTP+ +P + D+ D+ Sbjct: 921 LMSSDYAVPQKRKRVFIICTRDDMDVKPADLFPTPITEEPECQITARDTIKDLENIQCDE 980 Query: 50 KSTI 53 K+ Sbjct: 981 KACY 984 >gi|310830858|ref|YP_003965959.1| Modification methylase PspPI [Paenibacillus polymyxa SC2] gi|309250325|gb|ADO59891.1| Modification methylase PspPI [Paenibacillus polymyxa SC2] Length = 443 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 5/99 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + + D+G +RER +++ + F FP G+K D+ + G Sbjct: 271 LNSLDYGSRTKRERFFMVASV--YPGFLFPEKSGVKQTSIAEAGIISPDELEWVSPEESG 328 Query: 61 HQKRKENNKIAGKGFGYGLF---FENSATTNTLSARYYK 96 + + G + + A T++ ++K Sbjct: 329 TLRYFLERESKGISHNHHMTVFDVTKDAYLGTITKNHFK 367 >gi|302531731|ref|ZP_07284073.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302440626|gb|EFL12442.1| conserved hypothetical protein [Streptomyces sp. AA4] Length = 357 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 28/78 (35%), Gaps = 2/78 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLN-PSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A DFGV Q R+RL++ L P P R + + T L E Sbjct: 164 LNAADFGVAQSRQRLFVTGVLKTEKTTPGLPVPGFGGTRNRRVPGDPGKPHVTAGQAL-E 222 Query: 60 GHQKRKENNKIAGKGFGY 77 G E + +G+ Sbjct: 223 GLTASPEPSDEVAGRYGH 240 >gi|302876801|ref|YP_003845434.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|307687484|ref|ZP_07629930.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|302579658|gb|ADL53670.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] Length = 406 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 13/23 (56%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + A ++ VPQ RER+ I+ Sbjct: 185 INASEYSVPQNRERMIIVGIDKK 207 >gi|167763801|ref|ZP_02435928.1| hypothetical protein BACSTE_02181 [Bacteroides stercoris ATCC 43183] gi|167697917|gb|EDS14496.1| hypothetical protein BACSTE_02181 [Bacteroides stercoris ATCC 43183] Length = 357 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 35/113 (30%), Gaps = 21/113 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--------EFKFPTPLGIKPRLGDILEEHIDD--- 49 + A GVPQ+RER++ I + F + +K IL + I D Sbjct: 181 LDASKMGVPQKRERVFFICIRHDLGVHFLKVSDLFNVEPHICMKFNEIPILMKEITDFKG 240 Query: 50 KSTISNKLWEGHQKRKENNKIAGKG----------FGYGLFFENSATTNTLSA 92 K + + +E F + NT+++ Sbjct: 241 KEIKNGTKIRYVWEHREIADKDMSDTCMRLYGKELFFSKKYILEDRICNTITS 293 >gi|301020988|ref|ZP_07185039.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 69-1] gi|3660493|emb|CAA57706.1| M.EcoHK31I alpha polypeptide [Escherichia coli] gi|300398362|gb|EFJ81900.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 69-1] Length = 309 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 5/97 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS----VEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A FG PQRR R+YI+ L V F+ P I + G + S Sbjct: 152 LDAKYFGTPQRRRRVYIVASLGDMRSARVLFE-PGATRIVDKQGQGERANASGASATGLS 210 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + + + + N T TL +R Sbjct: 211 KADIYSIQHASIGRKATAGPQAKGYRNDGETYTLDSR 247 >gi|114675322|ref|XP_001163364.1| PREDICTED: DNA (cytosine-5-)-methyltransferase 1 isoform 1 [Pan troglodytes] Length = 1502 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1354 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1408 >gi|67970373|dbj|BAE01529.1| unnamed protein product [Macaca fascicularis] Length = 493 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 398 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 452 >gi|309783383|ref|ZP_07678091.1| C-5 cytosine-specific DNA methylase family protein [Ralstonia sp. 5_7_47FAA] gi|330827391|ref|YP_004390629.1| C-5 cytosine-specific DNA methylase [Alicycliphilus denitrificans K601] gi|308917844|gb|EFP63533.1| C-5 cytosine-specific DNA methylase family protein [Ralstonia sp. 5_7_47FAA] gi|329312699|gb|AEB87113.1| C-5 cytosine-specific DNA methylase [Alicycliphilus denitrificans K601] Length = 304 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 31/101 (30%), Gaps = 9/101 (8%) Query: 2 KACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 A D GVPQ R+RL+++ + P + H + + Sbjct: 142 DAADHGVPQNRQRLFLVCTRSRRPLRLSLPRREHRPIADVIQWDAHPWSPIATPRRSEKT 201 Query: 61 HQKRKENNKIAGKGF-------GYGLFFEN-SATTNTLSAR 93 ++ G F G GL + T++ R Sbjct: 202 LRQIAAGRAAHGDRFLIPYYSSGSGLTGRSIHRPVGTITTR 242 >gi|2760954|gb|AAB95336.1| EaeI methyltransferase alpha subunit [Enterobacter aerogenes] Length = 309 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 5/97 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS----VEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A FG PQRR R+YI+ L V F+ P I + G + S Sbjct: 152 LDAKYFGTPQRRRRVYIVASLGDMRSARVLFE-PGATRIVDKQGQGERTNASGASDTGLS 210 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + + + + N T TL +R Sbjct: 211 KADIYSIQHASIGRKATAGPQAKGYRNDGETYTLDSR 247 >gi|299753284|ref|XP_001833175.2| hypothetical protein CC1G_01237 [Coprinopsis cinerea okayama7#130] gi|298410229|gb|EAU88864.2| hypothetical protein CC1G_01237 [Coprinopsis cinerea okayama7#130] Length = 1253 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 17/34 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +GVPQ R RL I + KFP P Sbjct: 924 LQAAQYGVPQSRNRLIIWAAKRGATLPKFPVPTH 957 >gi|168467807|ref|ZP_02701644.1| Dmt [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195629099|gb|EDX48473.1| Dmt [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 819 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 5/34 (14%) Query: 1 MKACDFGVPQRRERLYII-----DFLNPSVEFKF 29 + A FGVPQRR R++++ F ++ F+F Sbjct: 198 LDAEYFGVPQRRHRVFVVGSAGEGFDPETILFEF 231 >gi|313123965|ref|YP_004034224.1| modification methylase rho11Si family protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280528|gb|ADQ61247.1| Modification methylase Rho11sI family protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 349 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 26/99 (26%), Gaps = 21/99 (21%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 D+ +PQ RER+YI+ L F P R + + + Sbjct: 151 NTADY-LPQNRERVYIVGHLRKKNTAQIFSRPGQSSAADRQSQRKINVVGNVKKPTQ--- 206 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKD 97 G TL A YKD Sbjct: 207 --------------TSRGDRYVVLGDGLAPTLLATNYKD 231 >gi|298486711|ref|ZP_07004768.1| C-5 cytosine-specific DNA methylase family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158794|gb|EFH99857.1| C-5 cytosine-specific DNA methylase family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 685 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 38/122 (31%), Gaps = 25/122 (20%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK---------PRLGDILEEHIDDKS 51 ++ACDFG P RERL++I +P P K + ++ KS Sbjct: 212 IRACDFGAPTSRERLFMIA-RCDGQPIVWPEPTHAKRPAKGQKPWKTAAECIDFTDLGKS 270 Query: 52 TISNK--------------LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKD 97 K + + + + + T+++ Y K Sbjct: 271 IFGRKKDLAPATLRRVAKGMKKFVIDNPAPFIVPIANWSGETVQPANEPLRTVTS-YPKG 329 Query: 98 GS 99 G+ Sbjct: 330 GA 331 >gi|239625135|ref|ZP_04668166.1| EaeI methyltransferase alpha subunit [Clostridiales bacterium 1_7_47_FAA] gi|239519365|gb|EEQ59231.1| EaeI methyltransferase alpha subunit [Clostridiales bacterium 1_7_47FAA] Length = 301 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 32/100 (32%), Gaps = 11/100 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNP----SVEFKF---PTPLGIKPRLGDILEEHIDDKSTI 53 + A FG PQRR R YI+ V F+ P R + + D+ Sbjct: 144 LDAKFFGTPQRRRRTYIVASRGTIGAAEVLFEQGTNPIINKQSTRTRNFIATGNDESLPE 203 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 +N H G + N T TL +R Sbjct: 204 ANIFSIQH----AGIGRRASAGPQGKGYRNDGETYTLDSR 239 >gi|302870498|ref|YP_003839135.1| DNA-cytosine methyltransferase [Micromonospora aurantiaca ATCC 27029] gi|302573357|gb|ADL49559.1| DNA-cytosine methyltransferase [Micromonospora aurantiaca ATCC 27029] Length = 383 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 20/57 (35%), Gaps = 3/57 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKFPTPL-GIKPRLGDILEEHIDDKSTIS 54 + D GVPQ RERL ++ P P G + D L+ + Sbjct: 162 IDMADLGVPQHRERLIVVGVRRDLKVRPPIIPEPYAGRHVTVADALDTSPIPDDAPN 218 >gi|331035537|gb|AEC53094.1| DNA-cytosine methyltransferase [Synechococcus phage S-CRM01] Length = 381 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 39/119 (32%), Gaps = 27/119 (22%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-----F-----KFPTPLGIKPRLGDILEEHIDDK 50 M AC GVPQ R+R+ I E F FP G K G+ + ++D Sbjct: 190 MNACRHGVPQNRQRVIFIAVRQDIAEKVGMTFLNISSLFPPESGTKMTFGEGMVGLVNDP 249 Query: 51 STISNKLWEGHQ--------------KRKENNKIAGKGFGYGLFFENSA---TTNTLSA 92 I + + K N G+ + ++ + TL+A Sbjct: 250 LEIKEMNEKWLKSNLYLNVASKMPDNPPKVLNGCDFHPKGHAFNMKRASMFQPSPTLTA 308 >gi|268610192|ref|ZP_06143919.1| cytosine-specific DNA methylase [Ruminococcus flavefaciens FD-1] Length = 475 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 14/26 (53%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + DFG+PQ RER+YI+ Sbjct: 204 LSPSDFGIPQIRERVYILGIRRDIRN 229 >gi|313124726|ref|YP_004034985.1| modification methyltransferase, cytosine-specific [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312281289|gb|ADQ62008.1| Modification methyltransferase, cytosine-specific [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 284 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPT 31 A DFGV Q R R+ I+ +L + + +P Sbjct: 62 NAQDFGVLQNRRRMIIVGWLK-NSDLAYPD 90 >gi|166366114|ref|YP_001658387.1| cytosine-specific modification DNA methylase [Microcystis aeruginosa NIES-843] gi|166088487|dbj|BAG03195.1| cytosine-specific modification DNA methylase [Microcystis aeruginosa NIES-843] Length = 431 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 24/64 (37%), Gaps = 10/64 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK----------FPTPLGIKPRLGDILEEHIDDK 50 + A D+G+PQ RER+ I ++ FP P + L E I Sbjct: 208 LFAPDYGIPQTRERIIFIGLNKTYLKATAIGHLENHDIFPRPTHKVIKHQLNLFESIYPL 267 Query: 51 STIS 54 T S Sbjct: 268 KTYS 271 >gi|94502003|ref|ZP_01308510.1| putative cytosine-specific DNA methyltransferase [Oceanobacter sp. RED65] gi|94425879|gb|EAT10880.1| putative cytosine-specific DNA methyltransferase [Oceanobacter sp. RED65] Length = 479 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 1/91 (1%) Query: 7 GVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN-KLWEGHQKRK 65 G ++R+R + + + + + E D K K ++ +K++ Sbjct: 323 GSIEQRKRYWFVATSCGLANPFSDALDHYQRKYFSVGECLEDGKHISDMFKTFDYLEKKE 382 Query: 66 ENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 +++ GKGF L NS + T+ Y K Sbjct: 383 KSDIEKGKGFRQQLVDGNSNSIGTIGKHYAK 413 >gi|1171048|sp|P25263|MTC1_HERAU RecName: Full=Modification methylase HgiCI; Short=M.HgiCI; AltName: Full=Cytosine-specific methyltransferase HgiCI gi|515372|emb|CAA38933.1| methyltransferase [Herpetosiphon aurantiacus] Length = 420 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 32/107 (29%), Gaps = 20/107 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLN--------------PSVEFKFPTP------LGIKPRLG 40 + + +F VPQ R R+YI+ S +FK + + Sbjct: 145 LNSSNFQVPQNRLRVYIVGLDQSQPELTITSHIGATDSHKFKQLSNQASLFDTNKIMLVR 204 Query: 41 DILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATT 87 DILE+H DK S + NS + Sbjct: 205 DILEDHPLDKYNCSTDFVNKLLAFIGHPIKLNGKRLIDYRNGNSIHS 251 >gi|311248707|ref|XP_003123295.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Sus scrofa] Length = 1587 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1271 LQAGQYGVAQTRRRAIILAAAPGEQLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 1325 >gi|254522834|ref|ZP_05134889.1| C-5 cytosine-specific DNA methylase [Stenotrophomonas sp. SKA14] gi|219720425|gb|EED38950.1| C-5 cytosine-specific DNA methylase [Stenotrophomonas sp. SKA14] Length = 651 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 1/44 (2%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHI 47 DFG P R R ++I + +P P + D+L Sbjct: 169 ADFGDPTTRRRFFLIG-RSDGKRLSWPEPTHDRVGGTDLLGSRP 211 >gi|284051998|ref|ZP_06382208.1| cytosine-specific methyltransferase [Arthrospira platensis str. Paraca] gi|79835461|gb|ABB52090.1| Mod [Arthrospira platensis] gi|291568828|dbj|BAI91100.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39] Length = 411 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 7/82 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK-------PRLGDILEEHIDDKSTI 53 + A ++G PQ+R+RL +I ++P + + ++ + I Sbjct: 158 LDASEYGAPQKRKRLILIGSRFDVKMAEYPATNNSEIVTVYQAISDLEKIDHFTNYDPGI 217 Query: 54 SNKLWEGHQKRKENNKIAGKGF 75 S E RK+ + + F Sbjct: 218 SPAFLEYEGDRKKYSLVPSDSF 239 >gi|328914001|gb|AEB65597.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens LL3] Length = 600 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 14/26 (53%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A DFGVPQ R R I+ N E Sbjct: 369 LTATDFGVPQIRRRFIILGVRNDLFE 394 >gi|308175642|ref|YP_003922347.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens DSM 7] gi|307608506|emb|CBI44877.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens DSM 7] gi|328555623|gb|AEB26115.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens TA208] Length = 597 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 14/26 (53%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A DFGVPQ R R I+ N E Sbjct: 366 LTATDFGVPQIRRRFIILGVRNDLFE 391 >gi|254711754|ref|ZP_05173565.1| DNA-cytosine methyltransferase [Brucella pinnipedialis B2/94] gi|256029614|ref|ZP_05443228.1| DNA-cytosine methyltransferase [Brucella pinnipedialis M292/94/1] gi|260167298|ref|ZP_05754109.1| DNA-cytosine methyltransferase [Brucella sp. F5/99] Length = 258 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 13/93 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A +GVPQ R+RL++I + F L L + ++ T+ + + + Sbjct: 91 LDASWYGVPQLRKRLFVIGRIGERHGF-----------LDSSLVKARSERQTVISDVLDI 139 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + + T T AR Sbjct: 140 LEGWVYARPFRAERGVRSIHEPFPTVTRT--AR 170 >gi|225628987|ref|ZP_03787021.1| Modification methylase HgiDI [Brucella ceti str. Cudo] gi|261319385|ref|ZP_05958582.1| modification methylase [Brucella pinnipedialis B2/94] gi|261756709|ref|ZP_06000418.1| DNA-cytosine methyltransferase [Brucella sp. F5/99] gi|265986615|ref|ZP_06099172.1| modification methylase [Brucella pinnipedialis M292/94/1] gi|225616833|gb|EEH13881.1| Modification methylase HgiDI [Brucella ceti str. Cudo] gi|261298608|gb|EEY02105.1| modification methylase [Brucella pinnipedialis B2/94] gi|261736693|gb|EEY24689.1| DNA-cytosine methyltransferase [Brucella sp. F5/99] gi|264658812|gb|EEZ29073.1| modification methylase [Brucella pinnipedialis M292/94/1] Length = 274 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 13/93 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A +GVPQ R+RL++I + F L L + ++ T+ + + + Sbjct: 107 LDASWYGVPQLRKRLFVIGRIGERHGF-----------LDSSLVKARSERQTVISDVLDI 155 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + + T T AR Sbjct: 156 LEGWVYARPFRAERGVRSIHEPFPTVTRT--AR 186 >gi|299756527|ref|XP_001829400.2| hypothetical protein CC1G_00579 [Coprinopsis cinerea okayama7#130] gi|298411717|gb|EAU92360.2| hypothetical protein CC1G_00579 [Coprinopsis cinerea okayama7#130] Length = 1235 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 21/46 (45%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH 46 ++A +G PQ RER ++ L + + P P P L+ H Sbjct: 943 LQAGHYGTPQGRERFILVAALPGTQLPELPQPTHAFPSTQLGLKLH 988 >gi|313897986|ref|ZP_07831526.1| C-5 cytosine-specific DNA methylase [Clostridium sp. HGF2] gi|312957258|gb|EFR38886.1| C-5 cytosine-specific DNA methylase [Clostridium sp. HGF2] Length = 514 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 23/71 (32%), Gaps = 1/71 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 +KACD+G P R+R ++I + +P P P + + + Sbjct: 173 LKACDYGAPTTRKRFFLIA-RSDGQHIVWPEPTHASPDSEYVKTGVKKPYVPAKDIIDWS 231 Query: 61 HQKRKENNKIA 71 + Sbjct: 232 ISAPSIFERKK 242 >gi|167644366|ref|YP_001682029.1| DNA-cytosine methyltransferase [Caulobacter sp. K31] gi|167644566|ref|YP_001682229.1| DNA-cytosine methyltransferase [Caulobacter sp. K31] gi|167346796|gb|ABZ69531.1| DNA-cytosine methyltransferase [Caulobacter sp. K31] gi|167346996|gb|ABZ69731.1| DNA-cytosine methyltransferase [Caulobacter sp. K31] Length = 440 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 25/86 (29%), Gaps = 1/86 (1%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 A DFGVPQ R+RL + + P G L D+ + + H Sbjct: 155 DAADFGVPQARKRLLFLGVRADTGM-TPPKLAGSGATESVTLARFTGDRRPRYQLVIQQH 213 Query: 62 QKRKENNKIAGKGFGYGLFFENSATT 87 + + A + Sbjct: 214 VLSMRLGEALSDPRNLTVVSAKQAIS 239 >gi|124486003|ref|YP_001030619.1| hypothetical protein Mlab_1183 [Methanocorpusculum labreanum Z] gi|124363544|gb|ABN07352.1| DNA-cytosine methyltransferase [Methanocorpusculum labreanum Z] Length = 352 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 5/33 (15%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 A D+GVPQ+R+RL II F P Sbjct: 159 NANDYGVPQKRKRLVIIASR-----FFIPKIPD 186 >gi|296535365|ref|ZP_06897565.1| site-specific DNA methylase [Roseomonas cervicalis ATCC 49957] gi|296264307|gb|EFH10732.1| site-specific DNA methylase [Roseomonas cervicalis ATCC 49957] Length = 337 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 14/19 (73%) Query: 1 MKACDFGVPQRRERLYIID 19 + A DFGVPQ R R++I+ Sbjct: 148 LDASDFGVPQSRRRVFILC 166 >gi|312959258|ref|ZP_07773776.1| DNA (cytosine-5-)-methyltransferase [Pseudomonas fluorescens WH6] gi|311286518|gb|EFQ65081.1| DNA (cytosine-5-)-methyltransferase [Pseudomonas fluorescens WH6] Length = 741 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 +KACDFG RERL++I + ++P P Sbjct: 370 LKACDFGAATTRERLFLIARRDGKP-LRWPEPTH 402 >gi|293365989|ref|ZP_06612691.1| modification methylase Sau3AI [Streptococcus oralis ATCC 35037] gi|307702387|ref|ZP_07639344.1| DNA-cytosine methyltransferase [Streptococcus oralis ATCC 35037] gi|291315532|gb|EFE55983.1| modification methylase Sau3AI [Streptococcus oralis ATCC 35037] gi|307624064|gb|EFO03044.1| DNA-cytosine methyltransferase [Streptococcus oralis ATCC 35037] Length = 421 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 34/91 (37%), Gaps = 3/91 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G QRR R++ + N +V F + + + E I N+ Sbjct: 159 INAADYGRSQRRRRVFFFVYRNDTV---FAKKIDNLYEKKEEIFEDNRYDDYIFNQGLFA 215 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 Q + + + Y L + ++T + Sbjct: 216 KQFPIKPIAVKNRHVFYELPNDIVEVSDTFT 246 >gi|270157659|ref|ZP_06186316.1| DNA-cytosine methyltransferase family protein [Legionella longbeachae D-4968] gi|269989684|gb|EEZ95938.1| DNA-cytosine methyltransferase family protein [Legionella longbeachae D-4968] Length = 414 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 2/64 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRLGDILEEHID-DKSTISNKLW 58 ++A VPQ+RERL II +P L L+ + ++K + Sbjct: 222 LRAQYLDVPQKRERLVIIGIRKDLQGNIAYPREQDYTVSLRQALQNVPESPGQKYTDKKY 281 Query: 59 EGHQ 62 + + Sbjct: 282 QLMK 285 >gi|313678719|ref|YP_004056459.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma bovis PG45] gi|312950602|gb|ADR25197.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma bovis PG45] Length = 324 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 7/97 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLN----PSVEFKFPTPLGIKPRLGDILEE--HIDDKSTIS 54 + + +FGVPQ+RER+ I + V + + + + D I Sbjct: 153 LDSSNFGVPQKRERVIFIGCKDKEKVDKVISLLSKHKEKTVTVFEAIGHLEKVADDKEIP 212 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 N ++ H + + + K G L S LS Sbjct: 213 NHIFSKHSEEIKERFMKLKE-GESLSKSFSDAFRKLS 248 >gi|145593130|ref|YP_001157427.1| DNA-cytosine methyltransferase [Salinispora tropica CNB-440] gi|145302467|gb|ABP53049.1| DNA-cytosine methyltransferase [Salinispora tropica CNB-440] Length = 652 Score = 42.3 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID 48 +GVPQ R+RL ++ + V F +P + + + + + + + Sbjct: 214 YGVPQFRQRLILVALRDG-VAFDWPPEVPDRVSVWNAIGDLPE 255 >gi|331090154|ref|ZP_08339042.1| hypothetical protein HMPREF1025_02625 [Lachnospiraceae bacterium 3_1_46FAA] gi|330402100|gb|EGG81672.1| hypothetical protein HMPREF1025_02625 [Lachnospiraceae bacterium 3_1_46FAA] Length = 428 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 1/64 (1%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 A FGV Q R R+ I+ +L S K+P L IK K + Sbjct: 207 NAHTFGVLQNRRRMIIVGWLKKSG-LKYPDFLEIKTDAIVNDLFADLPKLHPGESSDKYA 265 Query: 62 QKRK 65 + + Sbjct: 266 KTKA 269 >gi|169834887|ref|YP_001715830.1| modification methylase [Clostridium botulinum A3 str. Loch Maree] gi|169408994|gb|ACA57404.1| DNA (cytosine-5-)-methyltransferase [Clostridium botulinum A3 str. Loch Maree] Length = 284 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 33/97 (34%), Gaps = 14/97 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A + +PQ+R+RL +I P K+P +L D+LE DD Sbjct: 138 INANMW-LPQKRKRLILIGTKRPFDNLKYPE--SNPIKLKDLLE---DDPEIDIPNYVYK 191 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKD 97 +K + T A Y KD Sbjct: 192 RLNGAYRDKP--------IISTPEGVAPTCVAHYSKD 220 >gi|262118158|ref|YP_003275928.1| C-5 cytosine-specific DNA methylase [Gordonia bronchialis DSM 43247] gi|262088068|gb|ACY24035.1| C-5 cytosine-specific DNA methylase [Gordonia bronchialis DSM 43247] Length = 652 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 3/57 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + + FGVPQ R+RLYI+ + P ++ ++ K + Sbjct: 202 LNSMFFGVPQSRDRLYIVFWDRKLPA---PDLDHRPLAHCAHCDDIVESKWAWKTGI 255 >gi|18976421|ref|NP_577778.1| cytosine-specific DNA-methyltransferase [Pyrococcus furiosus DSM 3638] gi|18891953|gb|AAL80173.1| site-specific DNA-methyltransferase (cytosine-specific) [Pyrococcus furiosus DSM 3638] Length = 301 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 6/47 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHI 47 + A D+GVPQ R R++I + P + ++ D+L++ Sbjct: 146 LNALDYGVPQIRRRVFISNVKIR------PDKVKGPKKVWDVLKDVP 186 >gi|309799879|ref|ZP_07694084.1| DNA-cytosine methyltransferase [Streptococcus infantis SK1302] gi|308116469|gb|EFO53940.1| DNA-cytosine methyltransferase [Streptococcus infantis SK1302] Length = 412 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 3/52 (5%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPT--PLGIKPRLGDILEEHIDDKS 51 + FGV Q R R+ II +L + +P + D+L + K Sbjct: 208 NSKHFGVLQNRRRMIIIGWLK-NSGMAYPDFLKKESSFTVNDLLADLPKLKP 258 >gi|221369948|ref|YP_002521044.1| Modification methylase [Rhodobacter sphaeroides KD131] gi|221163000|gb|ACM03971.1| Modification methylase [Rhodobacter sphaeroides KD131] Length = 540 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 15/24 (62%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVE 26 A ++GVPQRR R+ I+ + + Sbjct: 239 AEEWGVPQRRHRVIIVGIRSDLAD 262 >gi|20068992|gb|AAM09644.1|AF458984_2 m6 adenine and m5 cytosine DNA methyltransferase [Acinetobacter lwoffii] Length = 952 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 18/81 (22%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV------EFKFPTPLGIKPRLG-----------DIL 43 + +GVPQ+R+R+ I+ + EF FPTP + ++ Sbjct: 873 LNTVHYGVPQKRKRVIILGVHKNLIGSHKIEEF-FPTPTTLDESQQVSAFEAIADLEHVI 931 Query: 44 EEHIDDKSTISNKLWEGHQKR 64 +K + +N+ + K Sbjct: 932 PNEFIEKPSTTNRYLDQINKY 952 >gi|171911252|ref|ZP_02926722.1| C-5 cytosine-specific DNA methylase [Verrucomicrobium spinosum DSM 4136] Length = 497 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 32/98 (32%), Gaps = 4/98 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G P R RL I +P G++L K+ W Sbjct: 168 LCAADYGDPTSRTRLIIQAVR-GKRRPVWPDATHGITPQGEVLSLVEPYKTAFDCVDWS- 225 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 R + K +G N+ + A +Y+ G Sbjct: 226 LPGRWLDEMPGKKKYGGLPLSPNTL--RRIHAGFYRHG 261 >gi|83950654|ref|ZP_00959387.1| modification methylase (Cytosine-specific methyltransferase [Roseovarius nubinhibens ISM] gi|83838553|gb|EAP77849.1| modification methylase (Cytosine-specific methyltransferase [Roseovarius nubinhibens ISM] Length = 504 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 13/23 (56%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 ++A D GVPQ R R+ ++ Sbjct: 229 LRAEDHGVPQARHRVIVVGVRKD 251 >gi|242023477|ref|XP_002432160.1| DNA methyltransferase, putative [Pediculus humanus corporis] gi|212517542|gb|EEB19422.1| DNA methyltransferase, putative [Pediculus humanus corporis] Length = 1161 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 19/37 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 ++A ++G+PQ R RL+I+ FP P + Sbjct: 858 LQAGNYGLPQSRRRLFILAAAPGYRLPFFPKPTHVFY 894 >gi|328544214|ref|YP_004304323.1| Modification methylase DdeI [polymorphum gilvum SL003B-26A1] gi|326413956|gb|ADZ71019.1| Modification methylase DdeI [Polymorphum gilvum SL003B-26A1] Length = 480 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 14/27 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEF 27 + A FGVPQ+R RL I + F Sbjct: 221 LDASRFGVPQKRSRLIAIGIRKGLLPF 247 >gi|169834680|ref|YP_001693292.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str. Okra] gi|169123228|gb|ACA47063.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str. Okra] Length = 284 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 14/97 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A + +PQ+R+RL +I P K+P IK + + ID + + +L Sbjct: 138 INANMW-LPQKRKRLILIGTKRPFDNLKYPESNPIKLKNLLEDDPEIDIPNYVYKRLNGA 196 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKD 97 ++ + + T A Y KD Sbjct: 197 YRDKP-------------IISTPEGVAPTCVAHYSKD 220 >gi|262038316|ref|ZP_06011702.1| modification methylase spri [Leptotrichia goodfellowii F0264] gi|261747667|gb|EEY35120.1| modification methylase spri [Leptotrichia goodfellowii F0264] Length = 318 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 26/75 (34%), Gaps = 2/75 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTI--SNKLW 58 + + D+GV Q RERLYI+ + KF + +D+K + Sbjct: 144 LDSLDYGVSQMRERLYIVGIKKELYKKKFNWKFKKSISKIEDFLIDVDNKELDINNETFQ 203 Query: 59 EGHQKRKENNKIAGK 73 + + K Sbjct: 204 KYLSNKYNTGKYNID 218 >gi|269964614|ref|ZP_06178852.1| hypothetical protein VMC_02820 [Vibrio alginolyticus 40B] gi|269830513|gb|EEZ84734.1| hypothetical protein VMC_02820 [Vibrio alginolyticus 40B] Length = 556 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 3/47 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE---FKFPTPLGIKPRLGDILE 44 + D+ VP +++RL +I F++P K L D L+ Sbjct: 148 LNVQDYEVPLKKKRLILIGVKKDLYNKCKFEWPKKGSRKVTLKDALQ 194 >gi|120610363|ref|YP_970041.1| C-5 cytosine-specific DNA methylase [Acidovorax citrulli AAC00-1] gi|120588827|gb|ABM32267.1| C-5 cytosine-specific DNA methylase [Acidovorax citrulli AAC00-1] Length = 710 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 1/71 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++ACD G P R+RL++I + ++P P +L + T ++ + Sbjct: 177 LRACDNGAPTIRKRLFLIARRDGLP-IQWPEQTHAAPTDRRVLAGKLAPYRTAADCIDFS 235 Query: 61 HQKRKENNKIA 71 + ++ Sbjct: 236 LEAASIFDRQR 246 >gi|237710586|ref|ZP_04541067.1| DNA-cytosine methyltransferase [Bacteroides sp. 9_1_42FAA] gi|229455308|gb|EEO61029.1| DNA-cytosine methyltransferase [Bacteroides sp. 9_1_42FAA] Length = 366 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 25/83 (30%), Gaps = 5/83 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A GVPQ+RER++ I + F + I E + + Sbjct: 192 LDASKMGVPQKRERVFFICIRHDLGV-HFLKVSDLFNVEPYINMEFNEPEIYYGE----Y 246 Query: 61 HQKRKENNKIAGKGFGYGLFFEN 83 + + + K + Sbjct: 247 ADYKGKAIGLKMKKLFEQRVAGD 269 >gi|303328045|ref|ZP_07358484.1| modification methylase MspI [Desulfovibrio sp. 3_1_syn3] gi|302861871|gb|EFL84806.1| modification methylase MspI [Desulfovibrio sp. 3_1_syn3] Length = 417 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 FG+PQ RER++++ ++EF+ I + IL I + K+ Sbjct: 151 KQFGIPQNRERVFVVASKRHAIEFE--DRPEIACDVNSILVHGIKHRLVEEAKV 202 >gi|238760580|ref|ZP_04621711.1| C-5 cytosine-specific DNA methylase [Yersinia aldovae ATCC 35236] gi|238701199|gb|EEP93785.1| C-5 cytosine-specific DNA methylase [Yersinia aldovae ATCC 35236] Length = 304 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%) Query: 1 MKACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLG 34 + D GVPQ R R++II + P Sbjct: 143 IDCADLGVPQNRVRMFIICTRSKKPLHLTLPKFSH 177 >gi|229489296|ref|ZP_04383160.1| modification methylase NaeI [Rhodococcus erythropolis SK121] gi|229323789|gb|EEN89546.1| modification methylase NaeI [Rhodococcus erythropolis SK121] Length = 343 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 17/27 (62%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEF 27 + A DFGVPQ R+ +++ F + +F Sbjct: 164 LNAADFGVPQDRKHGFLVAFQGAAADF 190 >gi|227431296|ref|ZP_03913349.1| DNA (cytosine-5-)-methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352889|gb|EEJ43062.1| DNA (cytosine-5-)-methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 367 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 34/102 (33%), Gaps = 12/102 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID-DKSTISNKLWE 59 + D+G PQ R R I + + +P K + D + + + +S W Sbjct: 164 LDTSDYGTPQVRRRAIIRMYKKGL-SWPWPKKRNHKITVYDAIGDLPSIEAGEVSPIKWH 222 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYY---KDG 98 +K E+ K G + YY KDG Sbjct: 223 FGRKHNESQIQWMKHTPTGHSAFENEV-------YYPKKKDG 257 >gi|256960248|ref|ZP_05564419.1| site-specific DNA methylase [Enterococcus faecalis Merz96] gi|257423072|ref|ZP_05600062.1| site-specific DNA methylase [Enterococcus faecalis X98] gi|256950744|gb|EEU67376.1| site-specific DNA methylase [Enterococcus faecalis Merz96] gi|257164896|gb|EEU94856.1| site-specific DNA methylase [Enterococcus faecalis X98] Length = 439 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 ++ACD+G P R+RL++I +PTP ++ Sbjct: 164 LRACDYGAPTTRKRLFMIA-RRDHKPIVWPTPTHGPRESKEV 204 >gi|169825443|ref|YP_001695618.1| modification methylase PspPI [Lysinibacillus sphaericus C3-41] gi|168994720|gb|ACA42259.1| Modification methylase PspPI [Lysinibacillus sphaericus C3-41] Length = 475 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 17/39 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL 39 + A D+ PQRRER +II +E P + Sbjct: 286 LDAVDYNSPQRRERTFIIGSKIGKIELPTPITTPDNYKT 324 >gi|17228429|ref|NP_484977.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120] gi|17130280|dbj|BAB72891.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120] Length = 477 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 32/100 (32%), Gaps = 3/100 (3%) Query: 2 KACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++GVPQ RER+ +I V + PT + D + + + E Sbjct: 244 NTANYGVPQIRERVVMICHRGKDKVPYLCPTHSEMGDFGLDKWRTLRESITNLDQSDAEY 303 Query: 61 HQKRKENNK--IAGKGFGYGLFFENSATTNTLSARYYKDG 98 + + K K Y + L YY G Sbjct: 304 IEFPEGRLKYYRMLKEGQYWKHLPDELQKEALGKSYYSGG 343 >gi|297194175|ref|ZP_06911573.1| DNA-cytosine methyltransferase [Streptomyces pristinaespiralis ATCC 25486] gi|297152146|gb|EFH31551.1| DNA-cytosine methyltransferase [Streptomyces pristinaespiralis ATCC 25486] Length = 328 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPL 33 + A DFGVPQ R++ ++ F P P Sbjct: 150 LNAADFGVPQDRKQGILVALKKEWFHAFTPPVPT 183 >gi|254228592|ref|ZP_04922017.1| Site-specific DNA methylase [Vibrio sp. Ex25] gi|262392607|ref|YP_003284461.1| DNA-cytosine methyltransferase [Vibrio sp. Ex25] gi|151938974|gb|EDN57807.1| Site-specific DNA methylase [Vibrio sp. Ex25] gi|262336201|gb|ACY49996.1| DNA-cytosine methyltransferase [Vibrio sp. Ex25] Length = 427 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 2 KACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + FG PQ R R++I F NP F G+ + D+ +D +K Sbjct: 153 NSRFFGAPQSRPRVFICAFRGNPLKAFSTLYETGVGTKPKDLRRAFLDVSECSKSK 208 >gi|257058000|ref|YP_003135888.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] gi|256588166|gb|ACU99052.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] Length = 423 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%) Query: 8 VPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDD 49 VPQ+RER+ II N FPTP L + L+ D Sbjct: 223 VPQKRERVVIIAVRNDLAIPALFPTPKNYTISLREALKNCPDS 265 >gi|46048774|ref|NP_996835.1| DNA (cytosine-5)-methyltransferase 1 [Gallus gallus] gi|12230343|sp|Q92072|DNMT1_CHICK RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1; AltName: Full=DNA methyltransferase GgaI; Short=DNA MTase GgaI; Short=M.GgaI; AltName: Full=MCMT gi|1109610|dbj|BAA07867.1| DNA (cytosine-5-)-methyltransferase [Gallus gallus] gi|1096715|prf||2112268A DNA methyltransferase Length = 1537 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R ++ FP PL + L +DDK +SN Sbjct: 1214 LQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSN 1268 >gi|310658846|ref|YP_003936567.1| c-5 cytosine-specific DNA methylase [Clostridium sticklandii DSM 519] gi|308825624|emb|CBH21662.1| C-5 cytosine-specific DNA methylase [Clostridium sticklandii] Length = 466 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 12/109 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDD--------KST 52 ++ACD+G P R+R ++I +P P P + ++ + Sbjct: 159 LRACDYGAPTTRKRFFMIA-RCDGQPIVWPKPTHSDPEQIEARMGLLNPWRTAAECIDWS 217 Query: 53 ISNKLWEGHQKRKENNKIAGKGFGYGLFFENSA---TTNTLSARYYKDG 98 I +K N + G+ F N+ + KDG Sbjct: 218 IPCPSIFDRKKPLAENTLRRIAKGFQKFIINNPTPFVVRIGQTGFAKDG 266 >gi|228913600|ref|ZP_04077228.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228846011|gb|EEM91034.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 427 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 13/98 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G QRR R++I +L + T + K + +IL N + Sbjct: 156 INAADYGNSQRRRRVFIFAYLKE----SYFTSVQSKMKPLEIL---------CENGFFAP 202 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 E + K + L + ++T A YY G Sbjct: 203 IFNVHEAPEENKKRGQFELPVDIIEVSDTFKAEYYNSG 240 >gi|166364460|ref|YP_001656733.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843] gi|166086833|dbj|BAG01541.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843] Length = 420 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 16/30 (53%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFP 30 + A ++G PQ+R RL +I K+P Sbjct: 158 LDASEYGAPQKRRRLILIGSRKDVTMAKYP 187 >gi|302866239|ref|YP_003834876.1| DNA-cytosine methyltransferase [Micromonospora aurantiaca ATCC 27029] gi|302569098|gb|ADL45300.1| DNA-cytosine methyltransferase [Micromonospora aurantiaca ATCC 27029] Length = 368 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 + A D+GV QRR R +I + P P K G++ Sbjct: 149 LLAADYGVSQRRPRTIVIGSRIGEI--PLPEPTHAKVPTGEL 188 >gi|330818898|ref|YP_004351115.1| C-5 cytosine-specific DNA methylase [Burkholderia gladioli BSR3] gi|327374440|gb|AEA65792.1| C-5 cytosine-specific DNA methylase [Burkholderia gladioli BSR3] Length = 828 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 1/79 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++ACD G P R+RL+I+ + +FP P ++ + T ++ + Sbjct: 217 LRACDNGAPTIRKRLFIVGRRDGLPV-RFPEQEYGDPTSHKVIAGMLAPYRTSADCIDFS 275 Query: 61 HQKRKENNKIAGKGFGYGL 79 + ++ Sbjct: 276 LPAQSIFSRKKALAKNTQR 294 >gi|228911354|ref|ZP_04075157.1| C-5 cytosine-specific DNA methylase [Bacillus thuringiensis IBL 200] gi|228848291|gb|EEM93142.1| C-5 cytosine-specific DNA methylase [Bacillus thuringiensis IBL 200] Length = 418 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 ++AC++G P R+RL++I + + +P P P Sbjct: 166 LQACNYGAPTIRKRLFMIA-RCDNKKIVWPKPTHGDP 201 >gi|240119361|dbj|BAH79224.1| methylase EcoO109IM [Escherichia coli O157:H7] Length = 414 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 35/113 (30%), Gaps = 23/113 (20%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV-EFKFP-------TPLGIKPRLGDILEEH------I 47 A ++G PQ RER+ +I + F P L LGD++ Sbjct: 176 NAANYGAPQIRERVILIGNRFGMIANFASPLFSNRVEDNLPPFKTLGDVIGPESGFVDKY 235 Query: 48 DDKSTISNKLWEGH---------QKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + S + + + E + G + L SA LS Sbjct: 236 PEVMNFSPRKLKYLSMVPPGGNWRSMPEEMQKESMGKSWYLKGGRSAYWRKLS 288 >gi|261225387|ref|ZP_05939668.1| C-5 cytosine-specific DNA methylase [Escherichia coli O157:H7 str. FRIK2000] gi|261255360|ref|ZP_05947893.1| C-5 cytosine-specific DNA methylase [Escherichia coli O157:H7 str. FRIK966] gi|323182002|gb|EFZ67413.1| modification methylase XorII [Escherichia coli 1357] Length = 401 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 35/113 (30%), Gaps = 23/113 (20%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV-EFKFP-------TPLGIKPRLGDILEEH------I 47 A ++G PQ RER+ +I + F P L LGD++ Sbjct: 163 NAANYGAPQIRERVILIGNRFGMIANFASPLFSNRVEDNLPPFKTLGDVIGPESGFVDKY 222 Query: 48 DDKSTISNKLWEGH---------QKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + S + + + E + G + L SA LS Sbjct: 223 PEVMNFSPRKLKYLSMVPPGGNWRSMPEEMQKESMGKSWYLKGGRSAYWRKLS 275 >gi|189404646|ref|ZP_02809925.2| modification methylase SinI [Escherichia coli O157:H7 str. EC869] gi|189375083|gb|EDU93499.1| modification methylase SinI [Escherichia coli O157:H7 str. EC869] Length = 417 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 35/113 (30%), Gaps = 23/113 (20%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV-EFKFP-------TPLGIKPRLGDILEEH------I 47 A ++G PQ RER+ +I + F P L LGD++ Sbjct: 179 NAANYGAPQIRERVILIGNRFGMIANFASPLFSNRVEDNLPPFKTLGDVIGPESGFVDKY 238 Query: 48 DDKSTISNKLWEGH---------QKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + S + + + E + G + L SA LS Sbjct: 239 PEVMNFSPRKLKYLSMVPPGGNWRSMPEEMQKESMGKSWYLKGGRSAYWRKLS 291 >gi|6318608|gb|AAF06965.1|AF157599_4 EcoO109IM [Escherichia coli] Length = 414 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 35/113 (30%), Gaps = 23/113 (20%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV-EFKFP-------TPLGIKPRLGDILEEH------I 47 A ++G PQ RER+ +I + F P L LGD++ Sbjct: 176 NAANYGAPQIRERVILIGNRFGMIANFASPLFSNRVEDNLPPFKTLGDVIGPESGFVDKY 235 Query: 48 DDKSTISNKLWEGH---------QKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + S + + + E + G + L SA LS Sbjct: 236 PEVMNFSPRKLKYLSMVPPGGNWRSMPEEMQKESMGKSWYLKGGRSAYWRKLS 288 >gi|85706642|ref|ZP_01037734.1| modification methylase (Cytosine-specific methyltransferase [Roseovarius sp. 217] gi|85668700|gb|EAQ23569.1| modification methylase (Cytosine-specific methyltransferase [Roseovarius sp. 217] Length = 511 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 14/22 (63%) Query: 3 ACDFGVPQRRERLYIIDFLNPS 24 A +FGVPQRR R+ I+ + Sbjct: 239 AEEFGVPQRRHRVIIVGIRSDL 260 >gi|79835456|gb|ABB52087.1| Mod [Arthrospira platensis] Length = 443 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 15/19 (78%) Query: 1 MKACDFGVPQRRERLYIID 19 + A DFGVPQ R+R++I+ Sbjct: 155 LDAVDFGVPQFRKRVFILG 173 >gi|284053383|ref|ZP_06383593.1| hypothetical protein AplaP_18124 [Arthrospira platensis str. Paraca] gi|291571237|dbj|BAI93509.1| type II DNA modification methyltransferase [Arthrospira platensis NIES-39] Length = 451 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 15/19 (78%) Query: 1 MKACDFGVPQRRERLYIID 19 + A DFGVPQ R+R++I+ Sbjct: 155 LDAVDFGVPQFRKRVFILG 173 >gi|283782595|ref|YP_003373349.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05] gi|283441341|gb|ADB13807.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05] Length = 424 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 3/47 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHI 47 + A D+G+PQRR R+YI K+P L + G I Sbjct: 180 INAADYGMPQRRRRVYIFA---EHDSKKWPNKLSRLLQNGVIARAFP 223 >gi|182438469|ref|YP_001826188.1| putative 5-methylcytosine methyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466985|dbj|BAG21505.1| putative 5-methylcytosine methyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 317 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPL 33 + A DFGVPQ R++ ++ + + F P P Sbjct: 149 LNAADFGVPQDRKQGVLVALKDRYFDAFVPPAPT 182 >gi|327439466|dbj|BAK15831.1| site-specific DNA methylase [Solibacillus silvestris StLB046] Length = 286 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 24/67 (35%), Gaps = 4/67 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + + G PQ RER++II P+ + D + I ++ + Sbjct: 148 INSKHHGQPQNRERVFIIGHHRSYGN----EPVFPIAKTTDGILRSIQADTSGKGHKSQQ 203 Query: 61 HQKRKEN 67 + + + Sbjct: 204 DRFYRID 210 >gi|303236370|ref|ZP_07322960.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN] gi|302483428|gb|EFL46433.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN] Length = 415 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 12/22 (54%) Query: 4 CDFGVPQRRERLYIIDFLNPSV 25 DFG+PQ R R+ I+ + Sbjct: 188 ADFGIPQHRRRVIIVGIRLDTF 209 >gi|150396423|ref|YP_001326890.1| DNA-cytosine methyltransferase [Sinorhizobium medicae WSM419] gi|150027938|gb|ABR60055.1| DNA-cytosine methyltransferase [Sinorhizobium medicae WSM419] Length = 632 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 20/98 (20%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKF-PTPLGIKPRLGDILEEHIDDKSTISNKLW 58 ++A D+G+ Q R R+ I F+ P +GD+L + ++ W Sbjct: 423 IQAKDYGLAQERSRVLFIGIRKDLARGFRMPPKFPQRSANIGDVLVDL------MAANGW 476 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 EG + + A + +T+ R K Sbjct: 477 EGAYEWARERREA------------NDVASTVVTRRGK 502 >gi|307111085|gb|EFN59320.1| hypothetical protein CHLNCDRAFT_137705 [Chlorella variabilis] Length = 1369 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 16/39 (41%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL 39 + A +FGV Q R+R +I + +P + Sbjct: 1099 LNAGNFGVAQSRKRTFIWAAAPGELLPDWPKLMHCFRTP 1137 >gi|327284227|ref|XP_003226840.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Anolis carolinensis] Length = 1553 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R ++ FP PL + L +DDK +SN Sbjct: 1236 LQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSN 1290 >gi|20147457|gb|AAM12503.1|AF416450_1 cytosine methyltransferase [Clostridium perfringens CPE str. F4969] Length = 182 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 2/48 (4%) Query: 11 RRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 RER++I+ FKF L I E +D+K + Sbjct: 1 SRERVFIVSIRKDIDNGSFKFKEGNDNLVTLESITENFVDEKYYCKDN 48 >gi|312142618|ref|YP_003994064.1| DNA-cytosine methyltransferase [Halanaerobium sp. 'sapolanicus'] gi|311903269|gb|ADQ13710.1| DNA-cytosine methyltransferase [Halanaerobium sp. 'sapolanicus'] Length = 406 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 1 MKACDFGVPQRRERLYIIDFLN 22 + A D+G PQ+R R++I Sbjct: 160 INAADYGFPQKRRRVFIFATRK 181 >gi|159030572|emb|CAO88235.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 426 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 16/30 (53%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFP 30 + A ++G PQ+R RL +I K+P Sbjct: 158 LDASEYGAPQKRRRLILIGSRKDVTMAKYP 187 >gi|115525257|ref|YP_782168.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisA53] gi|115519204|gb|ABJ07188.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisA53] Length = 589 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 14/24 (58%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV 25 KA ++GVPQ R R++I+ Sbjct: 310 KAEEYGVPQARHRMFIVGIREDIK 333 >gi|229078249|ref|ZP_04210814.1| Modification methylase Sau3AI [Bacillus cereus Rock4-2] gi|228705049|gb|EEL57470.1| Modification methylase Sau3AI [Bacillus cereus Rock4-2] Length = 427 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 13/98 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G QRR R++I +L S F + K + +IL N + Sbjct: 156 INAADYGNSQRRRRVFIFAYLKES-HFT---SVQSKMKPLEIL---------CENGFFAP 202 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 E + K + L + ++T A YY G Sbjct: 203 IFNVYEAPEENKKRGQFELPVDIIEVSDTFKAEYYNSG 240 >gi|194213189|ref|XP_001916472.1| PREDICTED: similar to DNA (cytosine-5)-methyltransferase 1 (Dnmt1) (DNA methyltransferase HsaI) (DNA MTase HsaI) (MCMT) (M.HsaI) (CXXC-type zinc finger protein 9) [Equus caballus] Length = 1615 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL + L +DD+ +SN Sbjct: 1298 LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDRKFVSN 1352 >gi|171472516|dbj|BAG15984.1| DNA methyltransferase 1 [Meriones unguiculatus] Length = 196 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 22/53 (41%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 A +GV Q R R I+ FP PL + L +DDK +SN Sbjct: 1 AGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSN 53 >gi|225164697|ref|ZP_03726934.1| DNA-cytosine methyltransferase [Opitutaceae bacterium TAV2] gi|224800687|gb|EEG19046.1| DNA-cytosine methyltransferase [Opitutaceae bacterium TAV2] Length = 372 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 21/61 (34%), Gaps = 1/61 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 ++A + GVPQ R R I+ F + P +G L + + W Sbjct: 146 IQASELGVPQLRPRYIIVGLRKDDYLRFSMNFKVITAPTVGATLLDLMMQNGWAGAHAWS 205 Query: 60 G 60 Sbjct: 206 S 206 >gi|2895087|gb|AAC39355.1| Met1-type cytosine DNA-methyltransferase [Daucus carota] Length = 1545 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKST 52 ++A +GVPQ R+R +I ++P P+ + ++ ++K Sbjct: 1286 LEAGAYGVPQSRKRAFIWAASPEETLPEWPEPMHVFA-APELKIALPENKYY 1336 >gi|291531290|emb|CBK96875.1| DNA-methyltransferase (dcm) [Eubacterium siraeum 70/3] Length = 425 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 31/91 (34%), Gaps = 6/91 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK---PRLGDILEEHIDDKSTISNKL 57 + A +FG+PQ R RL +I + K + DI++E+ + + Sbjct: 216 LNASNFGLPQNRPRLLMISVFIKDYDEKTIEKIKSFFDKKSSKDIVDEYASSRYYHKIDI 275 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTN 88 + + N K + N + Sbjct: 276 KDLLRIDYNNAKYREEAKEC---TPNDTVSR 303 >gi|331085772|ref|ZP_08334855.1| hypothetical protein HMPREF0987_01158 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406695|gb|EGG86200.1| hypothetical protein HMPREF0987_01158 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 411 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 2/89 (2%) Query: 5 DFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQKR 64 +FGVPQ R+R+ I + R D+ + + K T+ + + + Sbjct: 192 EFGVPQNRKRIIIFGVSKNVFGENAQKVVEEFYRN-DLPKYKVKKKRTVYDAIGNLPKLY 250 Query: 65 KENNKIAGKGFGYGLFFENSATTNTLSAR 93 N+ I G + N + AR Sbjct: 251 PMNDDIKINGVRTRHTVSDKGVPNHI-AR 278 >gi|330723541|gb|AEC45911.1| cytosine specific DNA methyltransferase [Mycoplasma hyorhinis MCLD] Length = 416 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 5/86 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + + D+ V Q R+R+ I + + FP P+ ++ + L E I+ + Sbjct: 245 LNSADYEVAQTRKRVIFIANKINKINY-FPKPI-LQQKEYKTLGECIEKYMYLEENKEIN 302 Query: 61 H---QKRKENNKIAGKGFGYGLFFEN 83 H + KE + ++N Sbjct: 303 HIFTKHSKEMQERIKNTPEGQSVYKN 328 >gi|257887107|ref|ZP_05666760.1| site-specific DNA-methyltransferase [Enterococcus faecium 1,141,733] gi|257823161|gb|EEV50093.1| site-specific DNA-methyltransferase [Enterococcus faecium 1,141,733] Length = 360 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 13/21 (61%) Query: 1 MKACDFGVPQRRERLYIIDFL 21 + + DFGVPQ RER +I Sbjct: 163 LNSLDFGVPQDRERFFIFGLT 183 >gi|227357019|ref|ZP_03841390.1| DNA-cytosine methyltransferase [Proteus mirabilis ATCC 29906] gi|261345118|ref|ZP_05972762.1| DNA (cytosine-5-)-methyltransferase [Providencia rustigianii DSM 4541] gi|227162822|gb|EEI47782.1| DNA-cytosine methyltransferase [Proteus mirabilis ATCC 29906] gi|282566805|gb|EFB72340.1| DNA (cytosine-5-)-methyltransferase [Providencia rustigianii DSM 4541] Length = 301 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 14/24 (58%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS 24 + A FG PQRR R+YII L Sbjct: 152 LDAKYFGTPQRRRRVYIIGSLGDM 175 >gi|167552502|ref|ZP_02346255.1| C-5 cytosine-specific DNA methylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322882|gb|EDZ10721.1| C-5 cytosine-specific DNA methylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 693 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 ++ACD+G P R+R +++ + +P P P+ + Sbjct: 194 LRACDYGAPTIRKRFFMVARCDGQPV-VWPEPTHGDPKSESV 234 >gi|304407248|ref|ZP_07388901.1| DNA-cytosine methyltransferase [Paenibacillus curdlanolyticus YK9] gi|304343689|gb|EFM09530.1| DNA-cytosine methyltransferase [Paenibacillus curdlanolyticus YK9] Length = 401 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 KA +FGVPQ RER+ + P + D Sbjct: 166 KAVEFGVPQSRERVIFLGVRKDLN--IIPEHPRAVFKEEDFF 205 >gi|241997518|ref|XP_002433408.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis] gi|215490831|gb|EEC00472.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis] Length = 414 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 3/58 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 ++A +G+PQ R+RL I+ + KFP P P + + K W Sbjct: 163 LQAGSYGLPQDRKRLVILAAAPGELLPKFPEPKTSFPSNNFV---TVKGKKFGPTTTW 217 >gi|308275289|emb|CBX31885.1| hypothetical protein N47_O13040 [uncultured Desulfobacterium sp.] Length = 423 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHI 47 + A D+GV Q+R+R+ + F P + +IL++ Sbjct: 202 ISANDYGVLQKRKRVILFGNREGKTGFFPMPEEWKPGINVEEILKDLP 249 >gi|213498012|emb|CAS84141.1| DNA (cytosine-5) methyltransferase [Nicotiana tomentosiformis] Length = 395 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 19/34 (55%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A FGVPQ R+R +I + ++P P+ Sbjct: 168 LEAGAFGVPQSRKRAFIWAASPEEILPEWPEPMH 201 >gi|229061562|ref|ZP_04198906.1| C5 methyltransferase alpha subunit [Bacillus cereus AH603] gi|228717796|gb|EEL69446.1| C5 methyltransferase alpha subunit [Bacillus cereus AH603] Length = 353 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 3/26 (11%) Query: 1 MKACDFG---VPQRRERLYIIDFLNP 23 + + D G VPQ RER++II L Sbjct: 134 LNSKDIGPKPVPQNRERVFIIGHLRG 159 >gi|52841468|ref|YP_095267.1| modification methylase (Eco47II, Sau96I) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628579|gb|AAU27320.1| modification methylase (Eco47II, Sau96I) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 416 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 1/49 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHID 48 ++A VPQ+RERL ++ FP L + L++ D Sbjct: 222 LRAQYLDVPQKRERLVMLGIRKDLKGTIAFPKEQDYTISLREALKDVPD 270 >gi|328857943|gb|EGG07057.1| hypothetical protein MELLADRAFT_85954 [Melampsora larici-populina 98AG31] Length = 883 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 18/53 (33%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTI 53 ++A +G PQ R R + P P P ++ +K + Sbjct: 542 LQAAQYGTPQERRRFILTAVKRGYTLPNLPDPTHFYPDGNLQIKLPDQNKIFM 594 >gi|295103751|emb|CBL01295.1| DNA-methyltransferase (dcm) [Faecalibacterium prausnitzii SL3/3] Length = 412 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 16/28 (57%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK 28 + A D+G QRR R ++ F N + F+ Sbjct: 157 INAADYGEAQRRRRTFLFAFRNDTALFR 184 >gi|120610423|ref|YP_970101.1| C-5 cytosine-specific DNA methylase [Acidovorax citrulli AAC00-1] gi|120588887|gb|ABM32327.1| C-5 cytosine-specific DNA methylase [Acidovorax citrulli AAC00-1] Length = 669 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 1/79 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++ACD G P R+RL++I + ++P P +L + T + + Sbjct: 177 LRACDNGAPTIRKRLFLIARRDGLP-IQWPEQTHAAPTDRRVLAGKLAPYRTAAECIDFS 235 Query: 61 HQKRKENNKIAGKGFGYGL 79 + ++ Sbjct: 236 LEAASIFDRPRPLAINTQR 254 >gi|256847840|ref|ZP_05553285.1| DNA-cytosine methyltransferase [Lactobacillus coleohominis 101-4-CHN] gi|256715529|gb|EEU30505.1| DNA-cytosine methyltransferase [Lactobacillus coleohominis 101-4-CHN] Length = 349 Score = 41.9 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 1/62 (1%) Query: 5 DFGVPQRRERLYIIDFLNPSV-EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQK 63 D+GVPQ R R+ ++ N ++ + P + D + + I + + Sbjct: 158 DYGVPQARHRIIVVGIRNDLASKYHYKVPSTEMYKNVDNSARNAIENPPIPENAFNNERT 217 Query: 64 RK 65 R+ Sbjct: 218 RQ 219 >gi|152969948|ref|YP_001335057.1| putative site-specific DNA methylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150954797|gb|ABR76827.1| putative site-specific DNA methylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 619 Score = 41.9 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 1/43 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 ++ACD+G P R+R +++ +P P+ +L Sbjct: 193 LRACDYGAPTIRKRFFMV-MRRDGQPIVWPEATHGDPKSPAVL 234 >gi|83645622|ref|YP_434057.1| site-specific DNA methylase [Hahella chejuensis KCTC 2396] gi|83633665|gb|ABC29632.1| Site-specific DNA methylase [Hahella chejuensis KCTC 2396] Length = 555 Score = 41.9 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 ++A ++G P R+RL+++ +P P PR D Sbjct: 179 LRAHEYGAPTIRKRLFMVA-RCDGQPIIWPAPTHGDPRKPDF 219 >gi|298377907|ref|ZP_06987856.1| DNA (cytosine-5-)-methyltransferase [Bacteroides sp. 3_1_19] gi|298265151|gb|EFI06815.1| DNA (cytosine-5-)-methyltransferase [Bacteroides sp. 3_1_19] Length = 409 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKF 29 A D+ VPQ RER+ +I N +F Sbjct: 201 DAYDYDVPQHRERVILIGIRNGE-DFTL 227 >gi|297739461|emb|CBI29643.3| unnamed protein product [Vitis vinifera] Length = 460 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 19/37 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 ++A +GVPQ R R +I ++P P+ + P Sbjct: 203 LEAGAYGVPQSRRRAFIWAASPEETLPEWPEPMHVFP 239 >gi|209550032|ref|YP_002281949.1| C-5 cytosine-specific DNA methylase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535788|gb|ACI55723.1| C-5 cytosine-specific DNA methylase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 646 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 10/72 (13%), Positives = 26/72 (36%), Gaps = 2/72 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE- 59 + A D+G R+R ++ + + +P P K + + + ++ + Sbjct: 168 LNAADYGDATTRQRFILMG-RSDGRKIHWPMPTHRKRDEVNADLFSAAEPWRPAREIIDW 226 Query: 60 GHQKRKENNKIA 71 + R N+ Sbjct: 227 SIKGRSILNRKK 238 >gi|333024772|ref|ZP_08452836.1| putative 5-methylcytosine methyltransferase [Streptomyces sp. Tu6071] gi|332744624|gb|EGJ75065.1| putative 5-methylcytosine methyltransferase [Streptomyces sp. Tu6071] Length = 324 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 2/63 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIK-PRLGDILEEHIDDKSTISNKLW 58 + A DFGV QRRE +++ F +P PL P LG+ L + + W Sbjct: 149 LDAKDFGVSQRREHGFLVAMSGERMKRFSWPVPLATPCPTLGETLRASMGARGWPGADDW 208 Query: 59 EGH 61 H Sbjct: 209 ADH 211 >gi|317132209|ref|YP_004091523.1| DNA-cytosine methyltransferase [Ethanoligenens harbinense YUAN-3] gi|315470188|gb|ADU26792.1| DNA-cytosine methyltransferase [Ethanoligenens harbinense YUAN-3] Length = 438 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 11/23 (47%) Query: 2 KACDFGVPQRRERLYIIDFLNPS 24 DFG PQ R+R +I+ Sbjct: 203 NTKDFGFPQNRKRAFILGIKKEH 225 >gi|119026251|ref|YP_910096.1| modification methylase Sau3AI [Bifidobacterium adolescentis ATCC 15703] gi|118765835|dbj|BAF40014.1| modification methylase Sau3AI [Bifidobacterium adolescentis ATCC 15703] Length = 424 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 30/95 (31%), Gaps = 7/95 (7%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKS---TISNKLW 58 A D+G+PQRR R+YI + + ++ L D++ S Sbjct: 181 NAADYGMPQRRRRVYIYA-EHDAPKWDLENQLFHVGVEARAFPIEPDERFGAERFSVSKD 239 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 ++ F +N L+ R Sbjct: 240 PYRSTKEFGIGDKISRFKEAGVMQNGKV---LTRR 271 >gi|66046078|ref|YP_235919.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. syringae B728a] gi|63256785|gb|AAY37881.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. syringae B728a] Length = 710 Score = 41.5 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 4/88 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHIDDKSTISN--KL 57 ++ACDFG P RERL++I +P P +P G + ++ K Sbjct: 212 IRACDFGAPTSRERLFMIA-RCDGQPIVWPEPTHAKRPAKGQKPWRTAAECIDFTDMGKS 270 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSA 85 G +K + G F ++ Sbjct: 271 IFGRKKDLAPATLRRVAKGMKKFVIDNP 298 >gi|21226380|ref|NP_632302.1| DNA-cytosine methyltransferase [Methanosarcina mazei Go1] gi|20904635|gb|AAM29974.1| DNA-cytosine methyltransferase [Methanosarcina mazei Go1] Length = 423 Score = 41.5 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK 36 + A DF V Q R R+ I + N + +P L Sbjct: 200 LNAKDFSVLQERNRIIFIGWKNEH-DLSYPDFLKTP 234 >gi|289177801|gb|ADC85047.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp. lactis BB-12] Length = 513 Score = 41.5 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 15/68 (22%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP--------------RLGDILEEHI 47 A +FG Q RER+ II + + + P P D++ + Sbjct: 295 NAANFGAAQIRERVVIIAKRDGTKC-DWLIPTHTDPDGKYVQNWNLPSWVTFRDVVYDIE 353 Query: 48 DDKSTISN 55 D + T ++ Sbjct: 354 DSRQTHTD 361 >gi|254825325|ref|ZP_05230326.1| deoxycytosine methylase [Listeria monocytogenes FSL J1-194] gi|255521307|ref|ZP_05388544.1| modification methylase, putative [Listeria monocytogenes FSL J1-175] gi|293594568|gb|EFG02329.1| deoxycytosine methylase [Listeria monocytogenes FSL J1-194] Length = 385 Score = 41.5 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 36/93 (38%), Gaps = 6/93 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTIS--NKLW 58 + A DFG+PQ R R +++ N +E + + + L + + + + + Sbjct: 212 LNALDFGIPQSRSRTFMLSIRNSEIEPE--EISNLDYSIESNLADFLRFEYVEEGVDAMP 269 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 R++ G+ + TNT+S Sbjct: 270 NYTPSREKIYNRNRLLAKNGVVKAD--FTNTIS 300 >gi|304372874|ref|YP_003856083.1| Cytosine-specific methyltransferase [Mycoplasma hyorhinis HUB-1] gi|304309065|gb|ADM21545.1| Cytosine-specific methyltransferase [Mycoplasma hyorhinis HUB-1] Length = 413 Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 5/86 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + + D+ V Q R+R+ I + + FP P+ ++ + L E I+ + Sbjct: 245 LNSADYEVAQTRKRVIFIANKINKINY-FPKPI-LQQKEYKTLGECIEKYMYLEENKEIN 302 Query: 61 H---QKRKENNKIAGKGFGYGLFFEN 83 H + KE + ++N Sbjct: 303 HIFTKHSKEMQERIKNTPEGQSVYKN 328 >gi|319443146|ref|ZP_07992302.1| DNA-cytosine methyltransferase [Corynebacterium variabile DSM 44702] Length = 417 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 6/54 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-----IKPRLGDILEEHIDD 49 + A DFG PQRR R +I + F P + + D + + +D+ Sbjct: 200 LDASDFGAPQRRLRFVMIGMR-DNTPPDFIGPTHGVEQTPQVTVRDAIGDLVDN 252 >gi|66046064|ref|YP_235905.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. syringae B728a] gi|63256771|gb|AAY37867.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. syringae B728a] Length = 684 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 4/88 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHIDDKSTISN--KL 57 ++ACDFG P RERL++I +P P +P G + + K Sbjct: 212 IRACDFGAPTSRERLFMIA-RCDEQPIVWPEPTHAKRPAKGQKPWRTAAECIDFTELGKS 270 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSA 85 G +K + G F ++ Sbjct: 271 IFGRKKDLAPATLRRVAKGMKKFVIDNP 298 >gi|330988818|gb|EGH86921.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 292 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 41/100 (41%), Gaps = 6/100 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRL---GDILEEHIDDKSTISNK 56 + FG + R R+ ++ + + E + ++ + D+++ + + K Sbjct: 112 LDGAVFGAFENRSRMALVAYTEGAFEPLRLDQITPLRTKERSLKDLIDAVPETDESW--K 169 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 ++ +++E + +GKGF L + + + Y K Sbjct: 170 CYDYLGRKEERDIASGKGFRRQLLTPEATSCGCIGRGYAK 209 >gi|304436864|ref|ZP_07396829.1| C-5 cytosine-specific DNA methylase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370179|gb|EFM23839.1| C-5 cytosine-specific DNA methylase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 409 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL 39 ++ACD+G P R+R +++ + +P P P Sbjct: 159 LRACDYGAPTIRKRFFLVARCDGLP-IVWPEPTHGDPST 196 >gi|295100151|emb|CBK89240.1| DNA-methyltransferase (dcm) [Eubacterium cylindroides T2-87] Length = 405 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 16/25 (64%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV 25 + A ++G QRR R++I + N +V Sbjct: 164 INAAEYGAAQRRRRVFIFAYRNDTV 188 >gi|153939897|ref|YP_001391385.1| DNA (cytosine-5-)-methyltransferase [Clostridium botulinum F str. Langeland] gi|152935793|gb|ABS41291.1| DNA (cytosine-5-)-methyltransferase [Clostridium botulinum F str. Langeland] gi|295319412|gb|ADF99789.1| DNA (cytosine-5-)-methyltransferase [Clostridium botulinum F str. 230613] Length = 547 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 3/88 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A FG PQ RER ++ + + P P+ +++ I D + Sbjct: 315 LNAVSFGTPQCRERYILVGAKEEILGDRKIELPNPIIDNEMNYITVKDAISDLEKYEPSV 374 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSA 85 +K +N K K F L N Sbjct: 375 GNMDEKIHKNYKPKTKNFYGELISANHD 402 >gi|147853569|emb|CAN82351.1| hypothetical protein VITISV_019436 [Vitis vinifera] Length = 377 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 19/37 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 ++A +GVPQ R R +I ++P P+ + P Sbjct: 120 LEAGAYGVPQSRRRAFIWAASPEETLPEWPEPMHVFP 156 >gi|42779446|ref|NP_976693.1| DNA-cytosine methyltransferase family protein [Bacillus cereus ATCC 10987] gi|42735362|gb|AAS39301.1| DNA-cytosine methyltransferase family protein [Bacillus cereus ATCC 10987] Length = 350 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 5 DFGVPQRRERLYIIDFLNP-SVEFKFPTP---LGIKPRLGDILEEHIDDKSTISNKL 57 ++GVPQ R RL I+ + VEFK P+ +GI + +E + +N+L Sbjct: 159 EYGVPQARHRLIIVGIRDDIDVEFKVPSTAPYVGIDNTCKNAIENPPIPEDAYNNEL 215 >gi|86750436|ref|YP_486932.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2] gi|86573464|gb|ABD08021.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2] Length = 438 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 10/20 (50%), Positives = 12/20 (60%) Query: 2 KACDFGVPQRRERLYIIDFL 21 A DFGVPQ R+RL + Sbjct: 153 DAADFGVPQTRKRLLFVGVR 172 >gi|325298704|ref|YP_004258621.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170] gi|324318257|gb|ADY36148.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170] Length = 399 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 13/57 (22%) Query: 3 ACDFGVPQRRERLYIIDFLNP--SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 A D+GVPQ+R R+ ++ F F ++LE + + + S Sbjct: 172 ASDYGVPQKRYRVLMVGIDRELNLGHFDF-----------NLLETIVRENNIPSEHY 217 >gi|207092664|ref|ZP_03240451.1| type II DNA modification enzyme [Helicobacter pylori HPKX_438_AG0C1] gi|207108938|ref|ZP_03243100.1| type II DNA modification enzyme [Helicobacter pylori HPKX_438_CA4C1] Length = 160 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 9/16 (56%), Positives = 13/16 (81%) Query: 1 MKACDFGVPQRRERLY 16 + A D+GVPQ RER++ Sbjct: 145 LNALDYGVPQIRERVF 160 >gi|302690426|ref|XP_003034892.1| hypothetical protein SCHCODRAFT_255903 [Schizophyllum commune H4-8] gi|300108588|gb|EFI99989.1| hypothetical protein SCHCODRAFT_255903 [Schizophyllum commune H4-8] Length = 1412 Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 19/41 (46%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGD 41 ++A FGVPQ RER+ + P P P++ + Sbjct: 1109 LQAGQFGVPQARERVIFLGAKLGLPMPVHPVPTHAFPKVPN 1149 >gi|113461565|ref|YP_719634.1| DNA-cytosine methyltransferase [Haemophilus somnus 129PT] gi|112823608|gb|ABI25697.1| DNA-cytosine methyltransferase [Haemophilus somnus 129PT] Length = 365 Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 35/101 (34%), Gaps = 18/101 (17%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A FGV QRR+R++++ + + IL E + + EG Sbjct: 173 LNAQYFGVAQRRKRVFLVA-------------SARRRSVAQILFEQKSLRGDFNQSQEEG 219 Query: 61 HQKRKENNKIAGKGFGYGLFFENS-----ATTNTLSARYYK 96 K + + + + + T++A YK Sbjct: 220 KSSAKNIGECSYGAYPPIICKDKDHTVGIGIAPTMTASQYK 260 >gi|254410214|ref|ZP_05023994.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196183250|gb|EDX78234.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 392 Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 16/29 (55%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFP 30 A G+PQ R+R+ I+ L+ + FP Sbjct: 149 NAMHLGLPQNRQRVVILGTLDKDTKDDFP 177 >gi|167034457|ref|YP_001669688.1| C-5 cytosine-specific DNA methylase [Pseudomonas putida GB-1] gi|166860945|gb|ABY99352.1| C-5 cytosine-specific DNA methylase [Pseudomonas putida GB-1] Length = 619 Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 32/88 (36%), Gaps = 4/88 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHIDDKSTIS--NKL 57 +KACDFG P RERL++I +P P P G D S +K Sbjct: 212 IKACDFGAPTSRERLFMIA-RCDGQPIVWPEPTHAKIPAKGQQKWRTAADCIDWSVPSKS 270 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSA 85 G +K + G F ++ Sbjct: 271 IFGRKKELAAATLRRVAKGMKKFVLDNP 298 >gi|332706962|ref|ZP_08427022.1| DNA-methyltransferase [Lyngbya majuscula 3L] gi|332354227|gb|EGJ33707.1| DNA-methyltransferase [Lyngbya majuscula 3L] Length = 450 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPL 33 + + ++G+PQRR+R+ II +F+ P P Sbjct: 177 IYSQEYGIPQRRKRVLIIGNRLGH-DFRIPAPK 208 >gi|2887280|emb|CAA05207.1| DNA (cytosine-5)-methyltransferase [Solanum lycopersicum] Length = 1559 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 19/34 (55%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +GVPQ R+R +I V ++P P+ Sbjct: 1299 LEAGAYGVPQSRKRAFIWAGSPEEVLPEWPEPMH 1332 >gi|225465257|ref|XP_002268238.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1208 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 19/37 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 ++A +GVPQ R R +I ++P P+ + P Sbjct: 951 LEAGAYGVPQSRRRAFIWAASPEETLPEWPEPMHVFP 987 >gi|224823639|ref|ZP_03696748.1| C-5 cytosine-specific DNA methylase [Lutiella nitroferrum 2002] gi|224604094|gb|EEG10268.1| C-5 cytosine-specific DNA methylase [Lutiella nitroferrum 2002] Length = 610 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 3/73 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHIDDKSTISNKLWE 59 M A D+G RERL++ + +P P +P+ G D SN L E Sbjct: 199 MNAADYGAATTRERLFLFARRDGRP-IVWPEPTHFKQPKKGQKAWRAAADHIDFSN-LGE 256 Query: 60 GHQKRKENNKIAG 72 RK+ A Sbjct: 257 SIFTRKKPLADAT 269 >gi|169977306|emb|CAQ18900.1| DNA (cytosine-5) methyltransferase [Nicotiana sylvestris] Length = 1558 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 19/34 (55%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A FGVPQ R+R +I + ++P P+ Sbjct: 1298 LEAGAFGVPQSRKRAFIWAASPEEILPEWPEPMH 1331 >gi|51596134|ref|YP_070325.1| modification methylase [Yersinia pseudotuberculosis IP 32953] gi|51589416|emb|CAH21038.1| putative modification methylase [Yersinia pseudotuberculosis IP 32953] Length = 581 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 ++A D+G P R+R +++ + +P P P+L ++ Sbjct: 196 LRASDYGAPTIRKRFFMV-MRCDGLPVVWPEPTHGDPKLLEV 236 >gi|117307345|dbj|BAF36443.1| DNA methyltransferase type 1 [Nicotiana tabacum] Length = 1558 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 19/34 (55%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A FGVPQ R+R +I + ++P P+ Sbjct: 1298 LEAGAFGVPQSRKRAFIWAASPEEILPEWPEPMH 1331 >gi|56695946|ref|YP_166300.1| C-5 cytosine-specific family DNA methylase [Ruegeria pomeroyi DSS-3] gi|56677683|gb|AAV94349.1| DNA methylase, C-5 cytosine-specific family [Ruegeria pomeroyi DSS-3] Length = 373 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A ++GVPQ R R+ I P P Sbjct: 153 LRAEEYGVPQERRRVVFIGNRVGVP-ISHPEPTH 185 >gi|183602700|ref|ZP_02964064.1| site-specific DNA-methyltransferase [Bifidobacterium animalis subsp. lactis HN019] gi|219682526|ref|YP_002468909.1| modification methylase SinI [Bifidobacterium animalis subsp. lactis AD011] gi|241190098|ref|YP_002967492.1| site-specific DNA-methyltransferase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195504|ref|YP_002969059.1| site-specific DNA-methyltransferase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218118|gb|EDT88765.1| site-specific DNA-methyltransferase [Bifidobacterium animalis subsp. lactis HN019] gi|219620176|gb|ACL28333.1| modification methylase SinI [Bifidobacterium animalis subsp. lactis AD011] gi|240248490|gb|ACS45430.1| site-specific DNA-methyltransferase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250058|gb|ACS46997.1| site-specific DNA-methyltransferase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793085|gb|ADG32620.1| site-specific DNA-methyltransferase [Bifidobacterium animalis subsp. lactis V9] Length = 453 Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 15/68 (22%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP--------------RLGDILEEHI 47 A +FG Q RER+ II + + + P P D++ + Sbjct: 235 NAANFGAAQIRERVVIIAKRDGTKC-DWLIPTHTDPDGKYVQNWNLPSWVTFRDVVYDIE 293 Query: 48 DDKSTISN 55 D + T ++ Sbjct: 294 DSRQTHTD 301 >gi|297618103|ref|YP_003703262.1| DNA-cytosine methyltransferase [Syntrophothermus lipocalidus DSM 12680] gi|297145940|gb|ADI02697.1| DNA-cytosine methyltransferase [Syntrophothermus lipocalidus DSM 12680] Length = 388 Score = 41.1 bits (95), Expect = 0.043, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 1/48 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID 48 + ++GVPQ R RL + + ++ P P G + + + Sbjct: 172 LDTANYGVPQFRSRLIVFGSRSG-IKISKPQPTHSPEANGKSISLYPE 218 >gi|4033737|gb|AAC97190.1| modification methylase M.NspI [Nostoc sp. PCC 7524] Length = 397 Score = 41.1 bits (95), Expect = 0.043, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 22/77 (28%), Gaps = 10/77 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFP---------TPLGIKPRLGDILEEHIDDKS 51 +++ D+GVPQ R R I +P P+ + Sbjct: 208 LESADYGVPQIRPRAIFIANRFGMPN-PYPKAQLLPEEYKPIESAISDLPEYTPIPEINH 266 Query: 52 TISNKLWEGHQKRKENN 68 + E ++ + Sbjct: 267 QWTRHSPEYMERIAKVP 283 >gi|7288140|dbj|BAA92852.1| DNA (cytosine-5-)-methyltransferase [Nicotiana tabacum] gi|56130955|gb|AAV80209.1| cytosine-5-methyltransferase [Nicotiana tabacum] Length = 1556 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 19/34 (55%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A FGVPQ R+R +I + ++P P+ Sbjct: 1296 LEAGAFGVPQSRKRAFIWAASPEEILPEWPEPMH 1329 >gi|291539767|emb|CBL12878.1| Site-specific DNA methylase [Roseburia intestinalis XB6B4] Length = 337 Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 12/19 (63%) Query: 2 KACDFGVPQRRERLYIIDF 20 A D+ VPQ RER+ I+ Sbjct: 187 NASDYSVPQNRERMIIVGV 205 >gi|294056254|ref|YP_003549912.1| DNA-cytosine methyltransferase [Coraliomargarita akajimensis DSM 45221] gi|293615587|gb|ADE55742.1| DNA-cytosine methyltransferase [Coraliomargarita akajimensis DSM 45221] Length = 518 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 1/56 (1%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 A + G PQ R RL+II + + ++L + S +S + Sbjct: 244 NAENQGCPQARHRLFIIGIRRDLKLKMHYLEKFAKDVSAWEVLHDLPKIHSHLSKE 299 >gi|4033740|gb|AAC97192.1| modification methylase M.NspHI [Nostoc sp. ATCC 29106] Length = 397 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 31/122 (25%), Gaps = 30/122 (24%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFP---------TPLGIKPRLGDILEEHIDDKS 51 +++ D+G+PQ R R I +P P+ + Sbjct: 208 LESADYGIPQIRPRAIFIANRFGMPN-PYPKAQLSPEKYKPIESAISDLPEYTPIPEINH 266 Query: 52 TISNKLWEGHQKRKENN------KIAGKGFGYGLFFENSATT--------------NTLS 91 + E ++ + + F + S T +S Sbjct: 267 QWTRHSPEYMERIAKVPPGGSLYQKYVDAFKRQYPGKPSMTVKENHGGTHIHPYLNRVIS 326 Query: 92 AR 93 AR Sbjct: 327 AR 328 >gi|228957327|ref|ZP_04119088.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802360|gb|EEM49216.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar pakistani str. T13001] Length = 427 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 13/98 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G QRR R++I +L S F + K + +IL N + Sbjct: 156 INAADYGNSQRRRRVFIFAYLKES-HFT---SVQSKMKPLEIL---------CENGFFAP 202 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 K E + K + L + ++T A YY G Sbjct: 203 IFKVHEAPEENKKRGQFELPVDIIEVSDTFKAEYYNSG 240 >gi|210630924|ref|ZP_03296669.1| hypothetical protein COLSTE_00554 [Collinsella stercoris DSM 13279] gi|210160239|gb|EEA91210.1| hypothetical protein COLSTE_00554 [Collinsella stercoris DSM 13279] Length = 931 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 12/24 (50%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV 25 A D+G PQ+R R+YI Sbjct: 688 NAADYGFPQKRRRVYIYAERTDEP 711 >gi|160875117|ref|YP_001554433.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS195] gi|160860639|gb|ABX49173.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS195] gi|315267308|gb|ADT94161.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS678] Length = 516 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 ++ACDFG P R+RL++I +P P P Sbjct: 193 LRACDFGAPTIRKRLFMIA-RCDGQPIIWPEPTHGAPN 229 >gi|150024829|ref|YP_001295655.1| modification methyltransferase Sau3AI [Flavobacterium psychrophilum JIP02/86] gi|149771370|emb|CAL42839.1| Probable modification methyltransferase Sau3AI [Flavobacterium psychrophilum JIP02/86] Length = 431 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 20/37 (54%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 A ++G+PQRR+R++I+ +L S + K Sbjct: 176 NAAEYGMPQRRKRIFILAYLQDSTIYNEIKETTSKDW 212 >gi|261381417|ref|ZP_05985990.1| DNA (cytosine-5-)-methyltransferase [Neisseria subflava NJ9703] gi|284795594|gb|EFC50941.1| DNA (cytosine-5-)-methyltransferase [Neisseria subflava NJ9703] Length = 420 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 7/66 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR------LGDILEEHIDDKSTIS 54 + A D+G Q R+R+ ++ F +P KP D+ H + S Sbjct: 197 LNANDYGALQARKRIILVGRRGHQTGF-YPQLEIDKPNVLVNEIFTDLPAIHAGEGSVRP 255 Query: 55 NKLWEG 60 K+ + Sbjct: 256 CKMKKY 261 >gi|307546796|ref|YP_003899275.1| C-5 cytosine-specific DNA methylase [Halomonas elongata DSM 2581] gi|307218820|emb|CBV44090.1| C-5 cytosine-specific DNA methylase [Halomonas elongata DSM 2581] Length = 682 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG 40 ++ACD+G P RERL++I + +P P K Sbjct: 244 LRACDYGAPTTRERLFLIARCDGRP-IVWPEPTHHKHPKR 282 >gi|217973804|ref|YP_002358555.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS223] gi|217498939|gb|ACK47132.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS223] Length = 555 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP-----RLGDILEEHIDDK---ST 52 ++ACD+G P R+RL++I +P P P + G +L + + Sbjct: 192 LRACDYGAPTIRKRLFMIA-RCDGQPIVWPEPTHGAPDSEVVKSGKLLPWRTAAECIDWS 250 Query: 53 ISNKLWEGHQKRKENNKIAGKGFGYGLFFENSA 85 + K G +K N + G F ++ Sbjct: 251 LPCKSIFGRKKPLAENTMKRIAKGIQRFVIDAK 283 >gi|120599327|ref|YP_963901.1| C-5 cytosine-specific DNA methylase [Shewanella sp. W3-18-1] gi|120559420|gb|ABM25347.1| C-5 cytosine-specific DNA methylase [Shewanella sp. W3-18-1] Length = 556 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP-----RLGDILEEHIDDK---ST 52 ++ACD+G P R+RL++I +P P P + G +L + + Sbjct: 193 LRACDYGAPTIRKRLFMIA-RCDGQPIVWPEPTHGAPDSEAVKSGKLLPWRTAAECIDWS 251 Query: 53 ISNKLWEGHQKRKENNKIAGKGFGYGLFFENSA 85 + K G +K N + G F ++ Sbjct: 252 LPCKSIFGRKKPLAENTMKRIAKGIQRFVIDAK 284 >gi|221065716|ref|ZP_03541821.1| C-5 cytosine-specific DNA methylase [Comamonas testosteroni KF-1] gi|220710739|gb|EED66107.1| C-5 cytosine-specific DNA methylase [Comamonas testosteroni KF-1] Length = 202 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 29/101 (28%), Gaps = 22/101 (21%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPR---LGDILEEHIDDKSTISNKL 57 A D GVPQ R R++II + + P + I D DK S Sbjct: 14 DAADHGVPQHRVRMFIIATQSRAPLVLDLPKRMHIPSSAFLDFDSGSWSPIDKPRRSCAT 73 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 + + ARYY +G Sbjct: 74 LARVAAGRAAHGDRF------------------PARYYGNG 96 >gi|322510858|gb|ADX06172.1| putative C-5 site-specific DNA methyltransferase [Organic Lake phycodnavirus 1] Length = 327 Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 +G+PQ R+RL + S ++ FP + L I+ ++ + + Sbjct: 178 NMSKYGIPQLRKRLVYVGVR-DSNQYVFPKEVVSNQNLKSIIRFSMEGAFKVDD 230 >gi|332710136|ref|ZP_08430089.1| DNA-methyltransferase [Lyngbya majuscula 3L] gi|332351094|gb|EGJ30681.1| DNA-methyltransferase [Lyngbya majuscula 3L] Length = 370 Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Query: 6 FGVPQRRER-LYIIDFLNPSVEFKFPTPLGIKP 37 FGVPQ R R ++I F F +PTP P Sbjct: 153 FGVPQTRRRFIFIASFDRFPSGFHWPTPEPDTP 185 >gi|71361889|gb|AAZ30053.1| C5-cytosine methyltransferase [Halorubrum saccharovorum] Length = 408 Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 17/36 (47%), Gaps = 5/36 (13%) Query: 2 KACDFGVPQRRER---LYIIDFLNPSVEFKFPTPLG 34 A ++GVPQ+R R +++ + + P P Sbjct: 195 NAANYGVPQKRNRTIGMFVYG--AEDSDIELPEPTH 228 >gi|299065518|emb|CBJ36687.1| Cytosine-specific methyltransferase [Ralstonia solanacearum CMR15] Length = 441 Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 14/33 (42%), Gaps = 1/33 (3%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 A ++G PQ RER I V FP P Sbjct: 177 NAVNYGAPQLRERALFIGNRYNVVV-DFPDPTH 208 >gi|123965679|ref|YP_001010760.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT 9515] gi|123200045|gb|ABM71653.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT 9515] Length = 689 Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 1 MKACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLGIKPRLGDILEEHIDD 49 + A +GVPQ R RL+I N K+P P LE+ I D Sbjct: 212 IYAWQYGVPQLRPRLFISGTKINECAPMKWPKPTYNSVDKAVTLEDAISD 261 >gi|46128541|ref|XP_388824.1| hypothetical protein FG08648.1 [Gibberella zeae PH-1] Length = 602 Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 33/99 (33%), Gaps = 12/99 (12%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQKRK 65 +G Q R+RL I+ FP +L + K+ +L + Sbjct: 405 WGAAQDRKRLIIVAAAPGERLPPFPKATHGD--EPGLLPYNTIGKALRGIQLEDDL---- 458 Query: 66 ENNKIAGKGFG-YGLFFENSATTNTLSAR----YYKDGS 99 ++ F ++ T++ R YY DGS Sbjct: 459 -HDPDKVHHFNPPRAPYDPERLAGTITTRGGDLYYPDGS 496 >gi|315150308|gb|EFT94324.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0012] Length = 334 Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 6/65 (9%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFP----TPLGIKPRLGDILEEHIDDKSTISN 55 + + + VPQ RER++II FP I P+ G I+ + +K S+ Sbjct: 147 LNSKAY-VPQNRERVFIIGHSRAERTPQIFPLTREDKPVIHPKKGIIVVGKLPEKYQQSS 205 Query: 56 KLWEG 60 +++ Sbjct: 206 RVFST 210 >gi|228950081|ref|ZP_04112266.1| Type II DNA-methyltransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228809608|gb|EEM56044.1| Type II DNA-methyltransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 463 Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 10/98 (10%) Query: 3 ACDFGVPQRRERLYIIDFLNPSV--EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 A D+G RR R Y + F +F+FP+P R L+ +D K T+ W+ Sbjct: 263 AYDYGSIARRNRTYALAFRTKEAFLDFQFPSPPRTIKRPK--LKVFLDCKDTV--HEWKD 318 Query: 61 HQKRKENNKIAGKGFGYGL----FFENSATTNTLSARY 94 + K++ + L ++ + +RY Sbjct: 319 FKAWKKSFESRDAFKNRSLEKSFVTPDAKEIQCILSRY 356 >gi|229133328|ref|ZP_04262157.1| Modification methylase Sau3AI [Bacillus cereus BDRD-ST196] gi|228650144|gb|EEL06150.1| Modification methylase Sau3AI [Bacillus cereus BDRD-ST196] Length = 413 Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 17/46 (36%), Gaps = 4/46 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH 46 + A ++G QRR R++I + N ++L Sbjct: 159 INAAEYGQAQRRRRIFIFAYRNDIPY----AITHKDETDYNLLHHK 200 >gi|325478716|gb|EGC81827.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus prevotii ACS-065-V-Col13] Length = 480 Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 17/23 (73%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + A FGVPQRR+R++++ L+ Sbjct: 175 LDAKYFGVPQRRKRIFLVADLDG 197 >gi|229131851|ref|ZP_04260720.1| Modification methylase Sau3AI [Bacillus cereus BDRD-ST196] gi|228651598|gb|EEL07564.1| Modification methylase Sau3AI [Bacillus cereus BDRD-ST196] Length = 427 Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 33/98 (33%), Gaps = 13/98 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G QRR R++I +L S + E + N + Sbjct: 156 INAADYGNSQRRRRVFIFAYLKES-------------HFASVQNEMKSLEILCENGFFAP 202 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 E + K + L + ++T A YY G Sbjct: 203 IFNVHEAPEENKKRGQFELPVDIIEVSDTFKAEYYNSG 240 >gi|186472257|ref|YP_001859599.1| DNA-cytosine methyltransferase [Burkholderia phymatum STM815] gi|184194589|gb|ACC72553.1| DNA-cytosine methyltransferase [Burkholderia phymatum STM815] Length = 356 Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 4/48 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS----VEFKFPTPLGIKPRLGDILE 44 + A +GVPQ R R+ I N V P P P + + Sbjct: 172 LTAGYYGVPQMRPRMIFIGIRNDLAACGVLPSHPEPQCWPPCVAEAWH 219 >gi|224539035|ref|ZP_03679574.1| hypothetical protein BACCELL_03935 [Bacteroides cellulosilyticus DSM 14838] gi|224519363|gb|EEF88468.1| hypothetical protein BACCELL_03935 [Bacteroides cellulosilyticus DSM 14838] Length = 345 Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 26/80 (32%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 ++GVPQ R+RL ++ ++ PT R + +K++ H Sbjct: 152 NVKEYGVPQSRKRLVLVGSRLAPIQIAHPTNKKKTVRQTIGKLPLPEKSDDPLHKIFPTH 211 Query: 62 QKRKENNKIAGKGFGYGLFF 81 + E G Sbjct: 212 TSQIEYLISQIPHNGGSRKD 231 >gi|330997448|ref|ZP_08321299.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT 11841] gi|329570822|gb|EGG52538.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT 11841] Length = 417 Score = 41.1 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 12/22 (54%) Query: 4 CDFGVPQRRERLYIIDFLNPSV 25 D+G+PQ R+R+ I+ Sbjct: 190 ADYGIPQHRKRVIILGISKGLF 211 >gi|158321055|ref|YP_001513562.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs] gi|158141254|gb|ABW19566.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs] Length = 448 Score = 41.1 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 + A DFGV Q R+R+ + F + +++P ++ Sbjct: 219 LHASDFGVHQSRKRMILFGFRDDL-NYQYPDFKKYAYSFENM 259 >gi|320109274|ref|YP_004184864.1| DNA-cytosine methyltransferase [Terriglobus saanensis SP1PR4] gi|319927795|gb|ADV84870.1| DNA-cytosine methyltransferase [Terriglobus saanensis SP1PR4] Length = 409 Score = 41.1 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 12/23 (52%) Query: 2 KACDFGVPQRRERLYIIDFLNPS 24 +FGVPQ RERL I + Sbjct: 179 NTANFGVPQSRERLIFIASRDGK 201 >gi|229008070|ref|ZP_04165613.1| Phage-related DNA methylase [Bacillus mycoides Rock1-4] gi|228753185|gb|EEM02680.1| Phage-related DNA methylase [Bacillus mycoides Rock1-4] Length = 184 Score = 41.1 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 16/45 (35%), Gaps = 6/45 (13%) Query: 1 MKACDFG-----VPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRL 39 + DF VPQ RER++II FP + Sbjct: 101 LNTKDFSTATRPVPQNRERVFIIGHSRKHRTRKVFPLSKDNQQTH 145 >gi|304390603|ref|ZP_07372556.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326359|gb|EFL93604.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 309 Score = 41.1 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 8/51 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF--------PTPLGIKPRLGDIL 43 + A GVPQ R+R++++ F P P+ I LGD L Sbjct: 148 LDAAYCGVPQSRKRMFVVGGQKEDDGFLDAELERALSPEPMSIFNYLGDSL 198 >gi|327534643|gb|AEA93477.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis OG1RF] Length = 334 Score = 41.1 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 6/65 (9%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFP----TPLGIKPRLGDILEEHIDDKSTISN 55 + + + VPQ RER++II FP I P+ G I+ + +K S+ Sbjct: 147 LNSKAY-VPQNRERVFIIGHSRAERTPQIFPLTREDKPVIYPKKGIIVVGKLPEKYQQSS 205 Query: 56 KLWEG 60 +++ Sbjct: 206 RVFST 210 >gi|159461698|gb|ABW96888.1| MET1-type DNA-methyltransferase [Elaeis guineensis] Length = 1543 Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 18/34 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +GVPQ R+R +I ++P P+ Sbjct: 1283 LEAGAYGVPQSRKRAFIWAASPKETLPEWPEPMH 1316 >gi|304409175|ref|ZP_07390796.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS183] gi|307303178|ref|ZP_07582933.1| C-5 cytosine-specific DNA methylase [Shewanella baltica BA175] gi|304352996|gb|EFM17393.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS183] gi|306913538|gb|EFN43960.1| C-5 cytosine-specific DNA methylase [Shewanella baltica BA175] Length = 284 Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 ++ACDFG P R+RL++I +P P P Sbjct: 193 LRACDFGAPTIRKRLFMIA-RCDGQPIVWPEPTHGAPN 229 >gi|160875076|ref|YP_001554392.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS195] gi|160860598|gb|ABX49132.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS195] Length = 516 Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 ++ACDFG P R+RL++I +P P P Sbjct: 193 LRACDFGAPTIRKRLFMIA-RCDGQPIVWPEPTHGAPN 229 >gi|160876612|ref|YP_001555928.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS195] gi|160862134|gb|ABX50668.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS195] gi|315268808|gb|ADT95661.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS678] Length = 516 Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 ++ACDFG P R+RL++I +P P P Sbjct: 193 LRACDFGAPTIRKRLFMIA-RCDGQPIVWPEPTHGAPN 229 >gi|190892898|ref|YP_001979440.1| DNA-cytosine methyltransferase [Rhizobium etli CIAT 652] gi|190698177|gb|ACE92262.1| putative DNA-cytosine methyltransferase protein [Rhizobium etli CIAT 652] Length = 638 Score = 40.8 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 20/98 (20%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPT-PLGIKPRLGDILEEHIDDKSTISNKLW 58 + A D+G+ Q R R+ II F+ P + LGD+L + ++ W Sbjct: 423 IHAEDYGLAQERSRVLIIGIRRDLGTAFRMPPTFPQRRTNLGDVLVDL------MAANGW 476 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 EG + + ++A +T+ R K Sbjct: 477 EGAYEWARERRE------------SNAIASTIVTRRGK 502 >gi|314942783|ref|ZP_07849602.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium TX0133C] gi|314953681|ref|ZP_07856564.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium TX0133A] gi|313594323|gb|EFR73168.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium TX0133A] gi|313598474|gb|EFR77319.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium TX0133C] Length = 380 Score = 40.8 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 27/92 (29%), Gaps = 23/92 (25%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + + VPQ RER+++I + + FP +I Sbjct: 147 LNSKAY-VPQNRERIFLIGHSRDACTEQVFPIIGSSPTSDQNI----------------- 188 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 R N G + + TL+ Sbjct: 189 ----RNLLNINPSNRGMGGQVYGSDDVAPTLT 216 >gi|314994133|ref|ZP_07859442.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133B] gi|313591442|gb|EFR70287.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133B] Length = 250 Score = 40.8 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 27/92 (29%), Gaps = 23/92 (25%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + + VPQ RER+++I + + FP +I Sbjct: 17 LNSKAY-VPQNRERIFLIGHSRDACTEQVFPIIGSSPTSDQNI----------------- 58 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 R N G + + TL+ Sbjct: 59 ----RNLLNINPSNRGMGGQVYGSDDVAPTLT 86 >gi|260559315|ref|ZP_05831497.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium C68] gi|261207983|ref|ZP_05922662.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TC 6] gi|260074675|gb|EEW62995.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium C68] gi|260077782|gb|EEW65494.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TC 6] Length = 331 Score = 40.8 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 27/92 (29%), Gaps = 23/92 (25%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + + VPQ RER+++I + + FP +I Sbjct: 98 LNSKAY-VPQNRERIFLIGHSRDACTEQVFPIIGSSPTSDQNI----------------- 139 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 R N G + + TL+ Sbjct: 140 ----RNLLNINPSNRGMGGQVYGSDDVAPTLT 167 >gi|69244913|ref|ZP_00603103.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium DO] gi|257883136|ref|ZP_05662789.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium 1,231,502] gi|257891884|ref|ZP_05671537.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium 1,231,410] gi|258616872|ref|ZP_05714642.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium DO] gi|289567034|ref|ZP_06447433.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium D344SRF] gi|293563825|ref|ZP_06678258.1| methyl transferase [Enterococcus faecium E1162] gi|294619669|ref|ZP_06699086.1| methyl transferase [Enterococcus faecium E1679] gi|68196079|gb|EAN10510.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium DO] gi|257818794|gb|EEV46122.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium 1,231,502] gi|257828244|gb|EEV54870.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium 1,231,410] gi|289161170|gb|EFD09071.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium D344SRF] gi|291594089|gb|EFF25546.1| methyl transferase [Enterococcus faecium E1679] gi|291604195|gb|EFF33696.1| methyl transferase [Enterococcus faecium E1162] Length = 380 Score = 40.8 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 27/92 (29%), Gaps = 23/92 (25%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + + VPQ RER+++I + + FP +I Sbjct: 147 LNSKAY-VPQNRERIFLIGHSRDACTEQVFPIIGSSPTSDQNI----------------- 188 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 R N G + + TL+ Sbjct: 189 ----RNLLNINPSNRGMGGQVYGSDDVAPTLT 216 >gi|228911341|ref|ZP_04075144.1| Phage-related DNA methylase [Bacillus thuringiensis IBL 200] gi|228848278|gb|EEM93129.1| Phage-related DNA methylase [Bacillus thuringiensis IBL 200] Length = 236 Score = 40.8 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 21/68 (30%), Gaps = 8/68 (11%) Query: 1 MKACDFG-----VPQRRERLYIIDF---LNPSVEFKFPTPLGIKPRLGDILEEHIDDKST 52 + DF VPQ RER++II S FP L Sbjct: 151 LNTKDFSTAARPVPQNRERVFIIGHSRRQRQSTRKVFPITQNYSKTRIKKLGNVNPSGWG 210 Query: 53 ISNKLWEG 60 S +++ Sbjct: 211 TSGHVYDS 218 >gi|237746251|ref|ZP_04576731.1| C-5 cytosine-specific DNA methylase [Oxalobacter formigenes HOxBLS] gi|229377602|gb|EEO27693.1| C-5 cytosine-specific DNA methylase [Oxalobacter formigenes HOxBLS] Length = 489 Score = 40.8 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGD 41 ++ACD+G P R+RL++I + +P P P+ + Sbjct: 170 LRACDYGAPTIRKRLFLIA-RCDGIPIVWPAPTHGDPKKLE 209 >gi|317495998|ref|ZP_07954360.1| DNA-cytosine methyltransferase [Gemella moribillum M424] gi|316913902|gb|EFV35386.1| DNA-cytosine methyltransferase [Gemella moribillum M424] Length = 415 Score = 40.8 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 23/99 (23%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G+PQ+R R++I + D+L + ID +S+I + + Sbjct: 170 INAGDYGMPQKRRRVFIFA-------------SKKNTKYSDMLSKKIDLESSIFEQSFPT 216 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGS 99 N++ + + N+ YKDG Sbjct: 217 DNDSDILNEVNINKYKDTVDVTNN----------YKDGK 245 >gi|229108527|ref|ZP_04238142.1| Modification methylase Sau3AI [Bacillus cereus Rock1-15] gi|228674934|gb|EEL30163.1| Modification methylase Sau3AI [Bacillus cereus Rock1-15] Length = 427 Score = 40.8 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 36/98 (36%), Gaps = 13/98 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G QRR R++I +L S F + K +IL N + Sbjct: 156 INAADYGNSQRRRRVFIFAYLKES-HFT---SVQSKMNPLEIL---------CENGFFAP 202 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 E + K + L + ++T A YY G Sbjct: 203 IFNVHEAPEENKKRGQFELPVDIIEVSDTFKAEYYNSG 240 >gi|330830237|ref|YP_004393189.1| Modification methylase [Aeromonas veronii B565] gi|328805373|gb|AEB50572.1| Modification methylase [Aeromonas veronii B565] Length = 433 Score = 40.8 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 10/103 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT-----PLGIKPRLGDILEEHID-DKSTIS 54 +K+ ++G+PQ R R+ ++ + + + P P+ +K +GD+ K S Sbjct: 151 IKSEEYGIPQARHRVILLGIRDDRILTELPKLSQEEPITVKQVIGDLPVLRSKLSKQEDS 210 Query: 55 NKLWEGHQKRKENNKIAGKGFGYG----LFFENSATTNTLSAR 93 + W + G L + SA TL A Sbjct: 211 YENWVSSVNDQLMELALNAPLGAEHIKPLANKLSAVAETLEAS 253 >gi|313142342|ref|ZP_07804535.1| LOW QUALITY PROTEIN: cytosine specific DNA methyltransferase [Helicobacter canadensis MIT 98-5491] gi|313131373|gb|EFR48990.1| LOW QUALITY PROTEIN: cytosine specific DNA methyltransferase [Helicobacter canadensis MIT 98-5491] Length = 232 Score = 40.8 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 2/65 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + DFG+ RER+Y + N F F + L +++ ++ + Sbjct: 56 LNTIDFGLAHSRERVYFVGIHNIMDKNFDFMFHTK-HKNIECFLSPEQENEFLKESQSYA 114 Query: 60 GHQKR 64 K Sbjct: 115 TFLKY 119 >gi|228918462|ref|ZP_04081908.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228949261|ref|ZP_04111525.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810387|gb|EEM56744.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228841185|gb|EEM86381.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 413 Score = 40.8 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 17/46 (36%), Gaps = 4/46 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH 46 + A ++G QRR R++I + N T +L Sbjct: 159 INAAEYGQAQRRRRIFIFAYRNDIPY----TITHKDETDYSLLHHK 200 >gi|331019754|gb|EGH99810.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 654 Score = 40.8 bits (94), Expect = 0.064, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 4/88 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHIDDKSTISN--KL 57 ++ACDFG P RERL++I +P P +P G + + ++ K Sbjct: 223 IRACDFGAPTSRERLFMIA-RCDGEPIVWPEPTHAKRPAKGQKPWKTAAECIDFTDLGKS 281 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSA 85 G +K + G F ++ Sbjct: 282 IFGRKKDLAPATLRRVAKGMKKFVIDTP 309 >gi|156936516|ref|YP_001440431.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC BAA-894] gi|156534770|gb|ABU79595.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC BAA-894] Length = 415 Score = 40.8 bits (94), Expect = 0.064, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKP 37 + A +G+PQ R R I+ + + FP PL P Sbjct: 166 LYAPHYGIPQTRWRTIILGCRDGLNPTELFPEPLRQAP 203 >gi|322511384|gb|ADX06692.1| putative C-5 cytosine specific DNA methyltransferase [Organic Lake phycodnavirus] Length = 358 Score = 40.8 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 +G+PQ R+RL + S ++ FP + L I+ ++ + + Sbjct: 169 NMSKYGIPQLRKRLVYVGVR-DSNQYVFPKEVVSNQNLKSIIRFSMEGAFKVDD 221 >gi|326319209|ref|YP_004236881.1| DNA-cytosine methyltransferase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323376045|gb|ADX48314.1| DNA-cytosine methyltransferase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 526 Score = 40.8 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 4/85 (4%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQ 62 A D+G+PQ R R+ + + +K R GD L K +S L + Sbjct: 241 ADDYGIPQSRHRVILFGIRSDIAA----ATQALKDRPGDFLLCKQPKKVGVSAALAGLPE 296 Query: 63 KRKENNKIAGKGFGYGLFFENSATT 87 R ++ + + S +T Sbjct: 297 LRSRLSREPDSQEAWIKAVKESPST 321 >gi|91773503|ref|YP_566195.1| DNA-cytosine methyltransferase [Methanococcoides burtonii DSM 6242] gi|91712518|gb|ABE52445.1| DNA-cytosine methyltransferase [Methanococcoides burtonii DSM 6242] Length = 569 Score = 40.8 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 7/37 (18%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 A D+G+PQRR+RL I ++ P P Sbjct: 183 NAADYGIPQRRKRLVI-------GDYPRPDPTHKDKW 212 >gi|283466067|emb|CBG92842.1| hypothetical protein [Enterococcus casseliflavus] Length = 359 Score = 40.8 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 36/117 (30%), Gaps = 17/117 (14%) Query: 1 MKACDFGVPQRRERLYIID----FLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + + GVPQRR R++++ F + F D +++ K Sbjct: 174 LDSQYLGVPQRRRRIFLVADFRDFRAREILFDTQGMQSHLETCDQNRLSSPKDNRSLTTK 233 Query: 57 LWEGHQKR-------KENNKIAGKGFGYGLFFENSATTNTLSAR------YYKDGSE 100 + K F +++ TL A Y+++G E Sbjct: 234 AGRQLFLYPFQERRMRTYAKEKNTKGFVSSFGQSTDPFPTLLAGTVDTFAYWQEGFE 290 >gi|255020360|ref|ZP_05292428.1| DNA-cytosine methyltransferase [Acidithiobacillus caldus ATCC 51756] gi|254970280|gb|EET27774.1| DNA-cytosine methyltransferase [Acidithiobacillus caldus ATCC 51756] Length = 449 Score = 40.8 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 17/110 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL----------EEHIDDK 50 + A FGVPQ R R+ I+ + + +P +K ++L K Sbjct: 180 LDASLFGVPQSRRRVVIVGIQDCPM-----SPADLKATFNEMLSKSAVAVRQHWGLHQTK 234 Query: 51 STISNKLWEGHQKRKENNKIAGKGFGYGLFFE-NSATTNTLSARYYKDGS 99 + + + F ++ + SA + R K GS Sbjct: 235 NVTAKEAIADLTGGARVVCPDSTEFESAVYTKATSAYARAM-RRGQKTGS 283 >gi|332158207|ref|YP_004423486.1| modification methylase [Pyrococcus sp. NA2] gi|331033670|gb|AEC51482.1| modification methylase [Pyrococcus sp. NA2] Length = 310 Score = 40.8 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 8/59 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + D+GVPQ R R++I ++E K P + R+ D+L++ D +N+LW Sbjct: 155 LNSLDYGVPQIRRRVFI-----SNIELK-PRKVRGPNRVWDVLKDVPPD--APNNELWN 205 >gi|229095557|ref|ZP_04226542.1| Modification methylase Sau3AI [Bacillus cereus Rock3-29] gi|228687859|gb|EEL41752.1| Modification methylase Sau3AI [Bacillus cereus Rock3-29] Length = 427 Score = 40.8 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 13/98 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G QRR R++I +L + + + +IL N + Sbjct: 156 INAADYGNSQRRRRVFIFAYLKE----SYFASVQNEMNSLEIL---------CENGFFAP 202 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 E + + K + L + ++T A YY G Sbjct: 203 IFNVHEAPEESKKRGQFELPVDIIEVSDTFKAEYYNSG 240 >gi|314940601|ref|ZP_07847733.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium TX0133a04] gi|313640221|gb|EFS04802.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium TX0133a04] Length = 289 Score = 40.8 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 27/92 (29%), Gaps = 23/92 (25%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + + VPQ RER+++I + + FP +I Sbjct: 56 LNSKAY-VPQNRERIFLIGHSRDACTEQVFPIIGPSSTSDQNI----------------- 97 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 R N G + + TL+ Sbjct: 98 ----RNLVNINPSNRGMGGQVYGSDGVAPTLT 125 >gi|256819720|ref|YP_003140999.1| DNA-cytosine methyltransferase [Capnocytophaga ochracea DSM 7271] gi|256581303|gb|ACU92438.1| DNA-cytosine methyltransferase [Capnocytophaga ochracea DSM 7271] Length = 389 Score = 40.8 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 32/100 (32%), Gaps = 32/100 (32%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + +PQ RER+Y+I L E FP D L + K Sbjct: 145 LNTR-WVLPQNRERIYLIGHLAGRSECGVFP------ITEDDRLFKRETRKE-------- 189 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGS 99 ++ T+++RY+K GS Sbjct: 190 ----------------NGEFPSIKTSPARTITSRYHKMGS 213 >gi|89055349|ref|YP_510800.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1] gi|88864898|gb|ABD55775.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1] Length = 502 Score = 40.8 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 5/35 (14%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 A + GVPQ R R++++ N PTP G P Sbjct: 229 AEEHGVPQARHRVFVVGIRND-----LPTPEGDMP 258 >gi|309378924|emb|CBX22511.1| putative DNA cytosine methyltransferase [Neisseria lactamica Y92-1009] Length = 330 Score = 40.8 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 28/94 (29%), Gaps = 20/94 (21%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPL----GIKPRLGDILEEHIDDKSTISNK 56 + A GVPQ R R ++I L F PT + D L ++ Sbjct: 142 LDASYCGVPQARTRFFLIGKLGEEHNFLTPTLTDRLAEKPMTVRDYLGNSLN-------- 193 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTL 90 + + + + F + T+ Sbjct: 194 ----LEHYYRHPR----NYNRRGIFSIDEPSPTI 219 >gi|308183975|ref|YP_003928108.1| DNA-cytosine methyltransferase [Helicobacter pylori SJM180] gi|308059895|gb|ADO01791.1| DNA-cytosine methyltransferase [Helicobacter pylori SJM180] Length = 414 Score = 40.8 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 15/27 (55%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKF 29 + D+ VPQ R+R+ I + E+ F Sbjct: 201 SDDYEVPQTRKRVIIFGVRKDNKEWLF 227 >gi|260580130|ref|ZP_05847960.1| site-specific DNA-methyltransferase (cytosine-specific) [Haemophilus influenzae RdAW] gi|260093414|gb|EEW77347.1| site-specific DNA-methyltransferase (cytosine-specific) [Haemophilus influenzae RdAW] Length = 304 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 28/94 (29%), Gaps = 20/94 (21%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFP----TPLGIKPRLGDILEEHIDDKSTISNK 56 + A GVPQ R R ++I LN F P + D L ++ Sbjct: 142 LDASYCGVPQSRTRFFLIGKLNSEHNFLIPTLSRKLSDKPMTVRDYLGNSLN-------- 193 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTL 90 + + + + F + T+ Sbjct: 194 ----LEFYYRHPR----NYNRRGIFSIDEPSPTI 219 >gi|326381717|ref|ZP_08203411.1| cytosine-specific methyltransferase [Gordonia neofelifaecis NRRL B-59395] gi|326199964|gb|EGD57144.1| cytosine-specific methyltransferase [Gordonia neofelifaecis NRRL B-59395] Length = 356 Score = 40.8 bits (94), Expect = 0.071, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID 48 + + + GVPQ R R+ + F+ P + + D Sbjct: 152 LTSAEHGVPQLRRRVVFVGHR-DRGLFQGPPITHDDETYVSVADAIFD 198 >gi|323143137|ref|ZP_08077837.1| DNA (cytosine-5-)-methyltransferase [Succinatimonas hippei YIT 12066] gi|322417087|gb|EFY07721.1| DNA (cytosine-5-)-methyltransferase [Succinatimonas hippei YIT 12066] Length = 541 Score = 40.8 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 16/26 (61%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A DFGVPQ+RER ++ + + Sbjct: 318 LCAADFGVPQKRERFVVMGVNSDISD 343 >gi|222151724|ref|YP_002560880.1| type II modification methyltransferase [Macrococcus caseolyticus JCSC5402] gi|222120849|dbj|BAH18184.1| type II modification methyltransferase [Macrococcus caseolyticus JCSC5402] Length = 413 Score = 40.8 bits (94), Expect = 0.073, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 14/24 (58%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS 24 + A D+G QRR R++I + + Sbjct: 162 INAADYGNAQRRRRVFIFGYRRET 185 >gi|28870591|ref|NP_793210.1| C-5 cytosine-specific DNA methylase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28853839|gb|AAO56905.1| C-5 cytosine-specific DNA methylase family protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 594 Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 4/86 (4%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHIDDKSTISNKLWEGH 61 ACDFG P RERL++I +P P +P G + + S+ Sbjct: 213 ACDFGAPTSRERLFMIA-RCDGQSIVWPEPTHAKRPSKGQQPLKSAAECIDFSDLGKSIF 271 Query: 62 QKRKENNKI--AGKGFGYGLFFENSA 85 +++K+ + G F ++ Sbjct: 272 ERKKDLAQATLRRVAKGMKKFVIDNP 297 >gi|320321292|gb|EFW77421.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea str. B076] Length = 410 Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKP 37 + A +GVPQ R R I+ FP PL P Sbjct: 161 LYAPHYGVPQTRWRTIILGSRCGVDPTALFPEPLHHAP 198 >gi|149882798|ref|YP_001294777.1| probable DNA methylase [Microbacterium phage Min1] gi|148763429|gb|ABR10447.1| probable DNA methylase [Microbacterium phage Min1] Length = 317 Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 33/78 (42%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++A +GVPQ R+R ++ L+ VE PT L+ ++ +++ L G Sbjct: 167 LRAEQYGVPQTRKRAILMARLDGKVEPPTPTHSRYYSTNPARLDPGVEKWVSMAEALGWG 226 Query: 61 HQKRKENNKIAGKGFGYG 78 +R G G G Sbjct: 227 MTRRPSVTVTGGSGRQGG 244 >gi|315613695|ref|ZP_07888602.1| modification methylase Sau3AI [Streptococcus sanguinis ATCC 49296] gi|315314386|gb|EFU62431.1| modification methylase Sau3AI [Streptococcus sanguinis ATCC 49296] Length = 421 Score = 40.4 bits (93), Expect = 0.076, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 34/91 (37%), Gaps = 3/91 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G QRR R++ + N +V F + + + E I N+ Sbjct: 159 INAADYGRSQRRRRVFFFVYRNDTV---FAKRIDNLYEKKEEIFEDNRYDDYIFNQGLFA 215 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 Q + + + Y L + ++T + Sbjct: 216 KQFPIKPIAVKNRHVFYELSNDIIEVSDTFT 246 >gi|222636555|gb|EEE66687.1| hypothetical protein OsJ_23341 [Oryza sativa Japonica Group] Length = 1555 Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++A FGV Q R+R +I +P P+ + ++ D K + K G Sbjct: 1297 LEAGTFGVAQSRKRAFIWAAAPGETLPDWPEPMHVFAS-PELKINLPDGKYYAAAKSTAG 1355 >gi|115470907|ref|NP_001059052.1| Os07g0182900 [Oryza sativa Japonica Group] gi|113610588|dbj|BAF20966.1| Os07g0182900 [Oryza sativa Japonica Group] Length = 445 Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++A FGV Q R+R +I +P P+ + ++ D K + K G Sbjct: 187 LEAGTFGVAQSRKRAFIWAAAPGETLPDWPEPMHVFAS-PELKINLPDGKYYAAAKSTAG 245 >gi|50509186|dbj|BAD30340.1| putative DNA methyltransferase [Oryza sativa Japonica Group] Length = 1548 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++A FGV Q R+R +I +P P+ + ++ D K + K G Sbjct: 1290 LEAGTFGVAQSRKRAFIWAAAPGETLPDWPEPMHVFAS-PELKINLPDGKYYAAAKSTAG 1348 >gi|109900394|ref|YP_663649.1| DNA-cytosine methyltransferase [Pseudoalteromonas atlantica T6c] gi|109702675|gb|ABG42595.1| DNA-cytosine methyltransferase [Pseudoalteromonas atlantica T6c] Length = 535 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 12/87 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFP-----TPLGIKPRLGDILEEHID-----DK 50 +K DFG+PQRR R+ ++ + K+ +P + D+L + K Sbjct: 249 IKTEDFGIPQRRHRVILLGLREDIAD-KWDNSLILSPTATQTSTQDVLNDLPKLRSGLSK 307 Query: 51 STISNKLW-EGHQKRKENNKIAGKGFG 76 +++ W E + K + G Sbjct: 308 GINNDESWVETLKNSKAKLSKTLQDSG 334 >gi|218199194|gb|EEC81621.1| hypothetical protein OsI_25142 [Oryza sativa Indica Group] Length = 1538 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++A FGV Q R+R +I +P P+ + ++ D K + K G Sbjct: 1280 LEAGTFGVAQSRKRAFIWAAAPGETLPDWPEPMHVFAS-PELKINLPDGKYYAAAKSTAG 1338 >gi|330974564|gb|EGH74630.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 588 Score = 40.4 bits (93), Expect = 0.080, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 37/122 (30%), Gaps = 25/122 (20%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG---------IKPRLGDILEEHIDDKS 51 ++ACDFG P RERL++I +P P + ++ KS Sbjct: 212 IRACDFGAPTSRERLFMIA-RCDGQPIVWPEPTHAKRPAKGQKPGRTAAECIDFTDLGKS 270 Query: 52 TISNK--------------LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKD 97 K + + + + + T+++ Y K Sbjct: 271 IFGRKKDLAPATLRRVAKGMKKFVIDNPAPFIVPIANWSGETVQSANEPLRTVTS-YPKG 329 Query: 98 GS 99 G+ Sbjct: 330 GA 331 >gi|284046510|ref|YP_003396850.1| DNA-cytosine methyltransferase [Conexibacter woesei DSM 14684] gi|283950731|gb|ADB53475.1| DNA-cytosine methyltransferase [Conexibacter woesei DSM 14684] Length = 424 Score = 40.4 bits (93), Expect = 0.080, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 12/23 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + A DFG PQRR RL I Sbjct: 158 LDAGDFGTPQRRPRLVFIGVRTD 180 >gi|262383127|ref|ZP_06076264.1| site-specific DNA methylase [Bacteroides sp. 2_1_33B] gi|262296005|gb|EEY83936.1| site-specific DNA methylase [Bacteroides sp. 2_1_33B] Length = 423 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 33/111 (29%), Gaps = 21/111 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK----------------FPTPLGIKPRLGDILE 44 + A ++GVP+ RER+ I +++ K +P+P L Sbjct: 214 LHAGNYGVPESRERVIFIGIRKSALKVKALRALQEEKVPKAYDPYPSPTHACTVEDKRLL 273 Query: 45 EHIDDKSTI-----SNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTL 90 + + ++ + Q+ K G T+ Sbjct: 274 PPVVCRDVFVGLEEPDRTDDLSQRYYSQAKYMGAHCQGQKEIALDNIGPTI 324 >gi|260591129|ref|ZP_05856587.1| modification methylase AluI [Prevotella veroralis F0319] gi|260536994|gb|EEX19611.1| modification methylase AluI [Prevotella veroralis F0319] Length = 452 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 18/50 (36%), Gaps = 3/50 (6%) Query: 6 FGVPQRRERLYIIDFLN---PSVEFKFPTPLGIKPRLGDILEEHIDDKST 52 FG+P R R+YI+ L FKFP + + D Sbjct: 157 FGIPHHRNRMYIVGRLKSKGGLQGFKFPDHEERPKCNINSIIVPKDTDYM 206 >gi|37201980|tpg|DAA01513.1| TPA_exp: putative cytosine-5 DNA methyltransferase [Oryza sativa (japonica cultivar-group)] Length = 1497 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++A FGV Q R+R +I +P P+ + ++ D K + K G Sbjct: 1239 LEAGTFGVAQSRKRAFIWAAAPGETLPDWPEPMHVFAS-PELKINLPDGKYYAAAKSTAG 1297 >gi|266623773|ref|ZP_06116708.1| putative C-5 cytosine-specific DNA methylase [Clostridium hathewayi DSM 13479] gi|288864409|gb|EFC96707.1| putative C-5 cytosine-specific DNA methylase [Clostridium hathewayi DSM 13479] Length = 456 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK 36 + A D+G P R+R Y I F +P P K Sbjct: 161 LVAADYGAPTTRKRWYAI-FRRDGNVITWPEPTHSK 195 >gi|171196104|dbj|BAG15930.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica Group] Length = 1486 Score = 40.4 bits (93), Expect = 0.084, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++A FGV Q R+R +I +P P+ + ++ D K + K G Sbjct: 1228 LEAGTFGVAQSRKRAFIWAAAPGETLPDWPEPMHVFAS-PELKINLPDGKYYAAAKSTAG 1286 >gi|170088424|ref|XP_001875435.1| C5-DNA-methyltransferase [Laccaria bicolor S238N-H82] gi|164650635|gb|EDR14876.1| C5-DNA-methyltransferase [Laccaria bicolor S238N-H82] Length = 1309 Score = 40.4 bits (93), Expect = 0.084, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 21/66 (31%), Gaps = 3/66 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK---PRLGDILEEHIDDKSTISNKL 57 ++A +G PQ R R+ V +FP P + + S Sbjct: 991 LQASHYGTPQGRSRVIFWGAKQGLVLPQFPLPSHAFEGRLACPSLPTGGHIPPPSRSKIS 1050 Query: 58 WEGHQK 63 + HQ Sbjct: 1051 GDYHQY 1056 >gi|254456632|ref|ZP_05070061.1| modification methylase [Candidatus Pelagibacter sp. HTCC7211] gi|207083634|gb|EDZ61060.1| modification methylase [Candidatus Pelagibacter sp. HTCC7211] Length = 380 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 26/83 (31%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQK 63 +GVPQ+R+R+ I +K + + L++ I K I + Sbjct: 169 SKYGVPQKRKRVIIFGVNKKLKNYKSISKKFYEKLRSQELKKIITVKQAIGDLDKFYPLN 228 Query: 64 RKENNKIAGKGFGYGLFFENSAT 86 + K + + Sbjct: 229 KIIKIKGRKFSHKSNSKKPDHSP 251 >gi|319428134|gb|ADV56208.1| DNA-cytosine methyltransferase [Shewanella putrefaciens 200] Length = 305 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 7/75 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A VPQ RERL+I+ + + + P + L+ +++ W+ Sbjct: 144 INAKTLQVPQSRERLFIVATRSQNP-IELKLPTYQTIPARNFLDLNLEG------HKWDK 196 Query: 61 HQKRKENNKIAGKGF 75 + R + K Sbjct: 197 VENRVLATRNRVKNG 211 >gi|94986833|ref|YP_594766.1| modification methylase BepI (cytosine-specific methyltransferase BepI) [Lawsonia intracellularis PHE/MN1-00] gi|94731082|emb|CAJ54445.1| Modification methylase BepI (Cytosine-specific methyltransferase BepI) [Lawsonia intracellularis PHE/MN1-00] Length = 294 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 36/100 (36%), Gaps = 12/100 (12%) Query: 1 MKACDFGVPQRRERLYIIDF------LNPSVEFKFPTPLG-IKPRLGDILEEHIDDKSTI 53 + + ++GVPQ R R++ I S+ P +G I ++ + + T+ Sbjct: 112 LFSNEYGVPQIRRRVFFIGLKTEALKRKVSINEIIPPKTHQKFVSVGTIFKDLQEPEYTL 171 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + + G + + S + TL A Sbjct: 172 DKEQQIYSKSKFY-----GSQWEGNREVDLSLPSPTLRAS 206 >gi|99081532|ref|YP_613686.1| C-5 cytosine-specific DNA methylase [Ruegeria sp. TM1040] gi|99037812|gb|ABF64424.1| prophage LambdaSo; type II DNA modification methyltransferase; putative [Ruegeria sp. TM1040] Length = 697 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 ++ CD+G P R+RL+ + +PTP P ++ Sbjct: 185 LRGCDYGAPTIRKRLF-VAIRFDGEPVSWPTPTHGDPNSAEV 225 >gi|330900173|gb|EGH31592.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 471 Score = 40.4 bits (93), Expect = 0.087, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 38/98 (38%), Gaps = 2/98 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN--KLW 58 + FG + R R+ +I + + E + L++ +DD K + Sbjct: 291 LDGAVFGAFESRSRMALIAYTEGAFEPLTLDQITPLRTKERSLKDLMDDVPETDESWKCY 350 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 + +++E + +GKGF L + + + Y K Sbjct: 351 DYLGRKEERDIASGKGFRRQLLTPEATSCGCIGRGYAK 388 >gi|228919775|ref|ZP_04083134.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839862|gb|EEM85144.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 442 Score = 40.4 bits (93), Expect = 0.087, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 33/98 (33%), Gaps = 13/98 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G QRR R++I +L S + E + N + Sbjct: 171 INAADYGNSQRRRRVFIFAYLKES-------------HFASVQSEMKSLEILCGNGFFAP 217 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 E + K + L + ++T A YY G Sbjct: 218 IFNVHEAPEENKKRGQFELPVDIIEVSDTFKAEYYNSG 255 >gi|313669224|ref|YP_004049508.1| DNA modification methylase [Neisseria lactamica ST-640] gi|313006686|emb|CBN88152.1| putative DNA modification methylase [Neisseria lactamica 020-06] Length = 330 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 27/94 (28%), Gaps = 20/94 (21%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPL----GIKPRLGDILEEHIDDKSTISNK 56 + A GVPQ R R ++I L F P + D L ++ Sbjct: 142 LDASYCGVPQARTRFFLIGKLGEEHNFLTPILTDRLAEKPMTVRDYLGNSLN-------- 193 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTL 90 + + + + F + T+ Sbjct: 194 ----LEHYYRHPR----NYNRRGIFSIDEPSPTI 219 >gi|261401478|ref|ZP_05987603.1| modification methylase HindV [Neisseria lactamica ATCC 23970] gi|269208450|gb|EEZ74905.1| modification methylase HindV [Neisseria lactamica ATCC 23970] Length = 330 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 27/94 (28%), Gaps = 20/94 (21%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPL----GIKPRLGDILEEHIDDKSTISNK 56 + A GVPQ R R ++I L F P + D L ++ Sbjct: 142 LDASYCGVPQARTRFFLIGKLGEEHNFLTPILTDRLAEKPMTVRDYLGNSLN-------- 193 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTL 90 + + + + F + T+ Sbjct: 194 ----LEHYYRHPR----NYNRRGIFSIDEPSPTI 219 >gi|208964726|gb|ACI31553.1| MET1 [Nicotiana benthamiana] Length = 227 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 18/32 (56%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP 32 ++A FGVPQ R+R +I + ++P P Sbjct: 196 LEAGAFGVPQSRKRAFIWAASPEEILPEWPEP 227 >gi|171911440|ref|ZP_02926910.1| DNA-cytosine methyltransferase [Verrucomicrobium spinosum DSM 4136] Length = 292 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 15/25 (60%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV 25 + A FGVPQRR RL+++ L Sbjct: 159 LDAAGFGVPQRRRRLFMVGGLGQPP 183 >gi|301167156|emb|CBW26735.1| modification methylase (cytosine-specific DNA methylase) [Bacteriovorax marinus SJ] Length = 383 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 10/88 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG---------IKPRLGDILEEHIDDKS 51 M + ++GVP++R R +I + + FP +GD LE K Sbjct: 153 MSSQNYGVPEKRRRTILIGSRV-NCDIVFPKHTHDTVMAKTFRPPMTVGDALENLETKKG 211 Query: 52 TISNKLWEGHQKRKENNKIAGKGFGYGL 79 + N E + + + K G Sbjct: 212 KLYNHDLEQAMIKSKIDLKRLKRIPEGK 239 >gi|291165152|gb|ADD81179.1| gp74 [Rhodococcus phage ReqiPine5] Length = 377 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 29/76 (38%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 A +GVPQ R R ++ +V PT R D L+ + ++++ L G Sbjct: 172 NAEQYGVPQTRRRAILMASRTKTVTAPAPTHSRYYSRTPDKLDPGVLPWVSMADALKWGM 231 Query: 62 QKRKENNKIAGKGFGY 77 R AG G Sbjct: 232 THRPYPTVAAGTASGG 247 >gi|257096314|sp|B1Q3J6|DNM1B_ORYSJ RecName: Full=DNA (cytosine-5)-methyltransferase 1B; Short=OsMET1b; AltName: Full=DNA methyltransferase 1-2; Short=OsMET1-2 gi|171196103|dbj|BAG15929.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica Group] Length = 1529 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++A FGV Q R+R +I +P P+ + ++ D K + K G Sbjct: 1271 LEAGTFGVAQSRKRAFIWAAAPGETLPDWPEPMHVFAS-PELKINLPDGKYYAAAKSTAG 1329 >gi|121610581|ref|YP_998388.1| C-5 cytosine-specific DNA methylase [Verminephrobacter eiseniae EF01-2] gi|121555221|gb|ABM59370.1| C-5 cytosine-specific DNA methylase [Verminephrobacter eiseniae EF01-2] Length = 494 Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 ++ACDFG P R RL+++ ++P P PR Sbjct: 171 LRACDFGAPTIRRRLFVVA-RCDGQPIQWPAPTHGDPR 207 >gi|172037464|ref|YP_001803965.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142] gi|171698918|gb|ACB51899.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142] Length = 430 Score = 40.4 bits (93), Expect = 0.093, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 18/26 (69%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A +FG+PQ+RERL++I ++ Sbjct: 203 LYAPNFGIPQKRERLFLIGLKKEALN 228 >gi|294629551|ref|ZP_06708111.1| modification methylase NaeI [Streptomyces sp. e14] gi|292832884|gb|EFF91233.1| modification methylase NaeI [Streptomyces sp. e14] Length = 328 Score = 40.4 bits (93), Expect = 0.094, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Query: 2 KACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKP 37 A D+GVPQ R++ ++ + F+ PTP +P Sbjct: 147 NAVDYGVPQNRKQGLLVAVERRWAEAFRPPTPTVRQP 183 >gi|170719036|ref|YP_001784193.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] gi|168827165|gb|ACA32536.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] Length = 365 Score = 40.4 bits (93), Expect = 0.094, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 35/98 (35%), Gaps = 12/98 (12%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN-KLW 58 + A FGV QRR+R++++ SV ++ GD + + KS+ N Sbjct: 173 LNAQYFGVAQRRKRVFLVASARGRSVAQILLEQKSLR---GDFNQSQEEGKSSAQNIGGC 229 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 K G + T++A YK Sbjct: 230 SYGAYPSIICKDKEYAVGISI-------APTMTASQYK 260 >gi|332308654|ref|YP_004436504.1| C-5 cytosine-specific DNA methylase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175983|gb|AEE25236.1| C-5 cytosine-specific DNA methylase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 424 Score = 40.4 bits (93), Expect = 0.096, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 38/99 (38%), Gaps = 5/99 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + + G ++R R + I + + P+ LG+I+E D S+ Sbjct: 234 LDSEQSGSLEQRPRYWFIAVSKGLSFNTQSTIPSFPRPYATLGEIMEPIAHDDGMWSDNT 293 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 +++ + GKGF L ++ + ++ Y K Sbjct: 294 --YLKEKAIRDAANGKGFKRQLVTGSAKSIGVINRLYTK 330 >gi|197294172|ref|YP_001798713.1| Putative C-5 cytosine-specific DNA methylase [Candidatus Phytoplasma australiense] gi|171853499|emb|CAM11339.1| Putative C-5 cytosine-specific DNA methylase [Candidatus Phytoplasma australiense] Length = 277 Score = 40.4 bits (93), Expect = 0.096, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 13/41 (31%), Gaps = 1/41 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLG 40 + + +G R R I+ + F FP + Sbjct: 74 LNSAWYGAATARNRAIIVAVKKEIKKIFTFPKITHFQKDNP 114 >gi|298491379|ref|YP_003721556.1| DNA-cytosine methyltransferase ['Nostoc azollae' 0708] gi|298233297|gb|ADI64433.1| DNA-cytosine methyltransferase ['Nostoc azollae' 0708] Length = 379 Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 7/37 (18%) Query: 1 MKACDFGVPQRRERLYIIDFL-------NPSVEFKFP 30 + + ++GVPQ R+R+ I F +F FP Sbjct: 172 INSIEYGVPQDRDRIISIGFNSHFLEEMGIEDDFTFP 208 >gi|229195244|ref|ZP_04322018.1| Modification methylase Sau3AI [Bacillus cereus m1293] gi|228588270|gb|EEK46314.1| Modification methylase Sau3AI [Bacillus cereus m1293] Length = 442 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 33/98 (33%), Gaps = 13/98 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G QRR R++I +L S + E + N + Sbjct: 171 INAADYGNSQRRRRVFIFAYLKES-------------HFASVQSEMKSLEILCGNGFFAP 217 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 E + K + L + ++T A YY G Sbjct: 218 IFNVHEAPEENKKRGQFELPVDIIEVSDTFKAEYYNSG 255 >gi|310815193|ref|YP_003963157.1| DNA-cytosine methyltransferase [Ketogulonicigenium vulgare Y25] gi|308753928|gb|ADO41857.1| DNA-cytosine methyltransferase [Ketogulonicigenium vulgare Y25] Length = 555 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 3 ACDFGVPQRRERLYIIDFLNPS 24 A FGVPQRR R+ I+ + Sbjct: 283 AEAFGVPQRRHRVIIVGIRSDL 304 >gi|292657161|ref|YP_003537057.1| site-specific DNA-methyltransferase (cytosine-specific) [Haloferax volcanii DS2] gi|291373000|gb|ADE05226.1| site-specific DNA-methyltransferase (cytosine-specific) [Haloferax volcanii DS2] Length = 406 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 8/87 (9%) Query: 2 KACDFGVPQRRER---LYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 A D+GVPQRR R + I + VEF P + + E + K + Sbjct: 185 NAADYGVPQRRMRTIGICIYGASDSEVEF--PPETHAREPEDGLKERWVTVKDVLKE--- 239 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSA 85 E + R + + G+ + + Sbjct: 240 EYERGRLKQDLDLGQKQVGIDGYPDDP 266 >gi|119384793|ref|YP_915849.1| DNA-cytosine methyltransferase [Paracoccus denitrificans PD1222] gi|119374560|gb|ABL70153.1| DNA-cytosine methyltransferase [Paracoccus denitrificans PD1222] Length = 511 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 3 ACDFGVPQRRERLYIIDFLNPS 24 A FGVPQRR R+ I+ + Sbjct: 239 AEAFGVPQRRHRVIIVGIRSDL 260 >gi|313768404|ref|YP_004062084.1| hypothetical protein MpV1_201c [Micromonas sp. RCC1109 virus MpV1] gi|312599100|gb|ADQ91124.1| hypothetical protein MpV1_201c [Micromonas sp. RCC1109 virus MpV1] Length = 351 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 30/95 (31%), Gaps = 1/95 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 +K +FG+PQ R R+ I+ + P I + + K + E Sbjct: 174 IKCEEFGIPQTRWRVIIMGVKSEKSA-SLPDDWNIITKNHRTCKIGPYFKHLEEPDVTED 232 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYY 95 ++ + + T+ A ++ Sbjct: 233 SAQKVYSKAKKLQKGQGQKEVGLDEFGPTMRAEHH 267 >gi|291007578|ref|ZP_06565551.1| DNA modification methylase M.NGOI [Saccharopolyspora erythraea NRRL 2338] Length = 308 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 3/95 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPT-PLGIKPRLGDILEEHIDDKSTISNKLW 58 + A FGVPQRR I+ F +P P +GD+L + + + + W Sbjct: 134 LDAQRFGVPQRRPHGLIVGMAPEHLARFSWPVGNDHGAPTVGDVLRKSMASRGWPGAEEW 193 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 G Q + I G G G + T + AR Sbjct: 194 -GRQANEIAPTIVGGAKGRGGADLGPSRTKDIWAR 227 >gi|134098143|ref|YP_001103804.1| DNA modification methylase M.NGOI [Saccharopolyspora erythraea NRRL 2338] gi|133910766|emb|CAM00879.1| DNA modification methylase M.NGOI [Saccharopolyspora erythraea NRRL 2338] Length = 234 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 3/95 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPT-PLGIKPRLGDILEEHIDDKSTISNKLW 58 + A FGVPQRR I+ F +P P +GD+L + + + + W Sbjct: 60 LDAQRFGVPQRRPHGLIVGMAPEHLARFSWPVGNDHGAPTVGDVLRKSMASRGWPGAEEW 119 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 G Q + I G G G + T + AR Sbjct: 120 -GRQANEIAPTIVGGAKGRGGADLGPSRTKDIWAR 153 >gi|261393337|emb|CAX50970.1| putative type II restriction-modification system enzyme Mod [Neisseria meningitidis 8013] Length = 330 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 27/94 (28%), Gaps = 20/94 (21%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPL----GIKPRLGDILEEHIDDKSTISNK 56 + A GVPQ R R ++I L F P + D L ++ Sbjct: 142 LDASYCGVPQARTRFFLIGKLGEEHNFLTPILTDRLADKPMTVRDYLGNSLN-------- 193 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTL 90 + + + + F + T+ Sbjct: 194 ----LEHYYRHPR----NYNRRGIFSIDEPSPTI 219 >gi|293407987|ref|ZP_06651827.1| modification methylase NmeDIP [Escherichia coli B354] gi|301328020|ref|ZP_07221181.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1] gi|291472238|gb|EFF14720.1| modification methylase NmeDIP [Escherichia coli B354] gi|300845467|gb|EFK73227.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1] Length = 379 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 18/29 (62%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF 29 + + ++G PQ RER+ ++ F N ++ F Sbjct: 166 INSIEYGAPQDRERIILLGFQNKNLTKSF 194 >gi|218895988|ref|YP_002444399.1| cytosine-specific methyltransferase NlaX [Bacillus cereus G9842] gi|218540614|gb|ACK93008.1| cytosine-specific methyltransferase NlaX [Bacillus cereus G9842] Length = 348 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 34/104 (32%), Gaps = 16/104 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLNP----SVEFKFPTPLG----IKPRLGDILEEHIDDKST 52 + A +G+PQ+R RL+ L + P P+ P +LE+ ++ + Sbjct: 160 LYADHYGLPQKRRRLFFCGVLREYSIGNELLLEPQPIPREEWKYPTTWHLLEKEMNPRHL 219 Query: 53 ISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 I K E G + ++A K Sbjct: 220 IPTKTRETVL--------RPNPKWMGNLQIDRPIARPITASMSK 255 >gi|119896645|ref|YP_931858.1| putative methylase [Azoarcus sp. BH72] gi|119669058|emb|CAL92971.1| putative methylase [Azoarcus sp. BH72] Length = 326 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 6/24 (25%), Positives = 14/24 (58%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS 24 + + DFG Q R+R++++ + Sbjct: 144 LNSADFGSAQARKRMFLVCDRKGT 167 >gi|290510874|ref|ZP_06550244.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. 1_1_55] gi|289777590|gb|EFD85588.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. 1_1_55] Length = 616 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 1/43 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 ++ACD+G P R+R +++ +P P+ +L Sbjct: 193 LRACDYGAPTIRKRFFMV-MRRDGQPIVWPAATHGDPKSPAVL 234 >gi|331646824|ref|ZP_08347925.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M605] gi|331044366|gb|EGI16495.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M605] Length = 862 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 48/129 (37%), Gaps = 34/129 (26%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-----FKF--------PTP---------LGIKPR 38 + A FGV QRR R++++ ++ F+F P+ +G + Sbjct: 198 LDAQYFGVAQRRRRVFVVASARTDLDPATVLFEFEGVRRDIAPSRGEGKEVAGNVGNGIK 257 Query: 39 LGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLF----------FENSATTN 88 G + ++ T++ G +N+ G GL + + T + Sbjct: 258 SGSHWDNPVNPHPTLNQSHNTGGIG--ASNQEIFAQRGSGLVGAYRMVAFGEYADDETAS 315 Query: 89 TLSARYYKD 97 T+ AR +KD Sbjct: 316 TVKARDFKD 324 >gi|325962428|ref|YP_004240334.1| DNA-methyltransferase Dcm [Arthrobacter phenanthrenivorans Sphe3] gi|323468515|gb|ADX72200.1| DNA-methyltransferase Dcm [Arthrobacter phenanthrenivorans Sphe3] Length = 454 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 10/22 (45%) Query: 2 KACDFGVPQRRERLYIIDFLNP 23 A +G PQ R RL II Sbjct: 176 NAVHYGAPQHRPRLLIIALRRD 197 >gi|218556814|ref|YP_002389728.1| putative modification methylase NmeDIP [Escherichia coli IAI1] gi|218363583|emb|CAR01240.1| putative modification methylase NmeDIP [Escherichia coli IAI1] Length = 379 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 19/31 (61%), Gaps = 2/31 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV--EFKF 29 + + ++G PQ R+R+ +I FL+ +F + Sbjct: 166 INSIEYGAPQDRQRIILIGFLDEKYASQFNW 196 >gi|146309050|ref|YP_001189515.1| DNA-cytosine methyltransferase [Pseudomonas mendocina ymp] gi|145577251|gb|ABP86783.1| DNA-cytosine methyltransferase [Pseudomonas mendocina ymp] Length = 365 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 27/83 (32%), Gaps = 13/83 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKS--------- 51 + A DFG P +R R+++ F + P D L ++ + Sbjct: 148 LDASDFGAPTKRRRVFVFGFDKQRMR----VPSLENLTQSDALRVNVHEAIGDLSASRAV 203 Query: 52 TISNKLWEGHQKRKENNKIAGKG 74 + LW+ ++ + Sbjct: 204 RGNPNLWKYGPRKASAYAQKLRA 226 >gi|150024948|ref|YP_001295774.1| type II modification methyltransferase [Flavobacterium psychrophilum JIP02/86] gi|149771489|emb|CAL42958.1| Probable type II modification methyltransferase [Flavobacterium psychrophilum JIP02/86] Length = 425 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 1 MKACDFGVPQRRERLYIIDFLN 22 + + +GVPQ RER+ I F Sbjct: 209 LHSGQYGVPQSRERIIFIGFKK 230 >gi|29566860|ref|NP_818425.1| gp127 [Mycobacterium phage Omega] gi|29425585|gb|AAN12767.1| gp127 [Mycobacterium phage Omega] Length = 247 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 15/25 (60%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV 25 + A GVPQRR R++I+ L S Sbjct: 150 LDAQFTGVPQRRRRIFIVGHLGDSG 174 >gi|209527695|ref|ZP_03276192.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209491867|gb|EDZ92225.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 314 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 28/100 (28%), Gaps = 13/100 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG----IKPRLGDILEEHIDDKSTISNK 56 + A GVPQ R+R ++I L F P + D L + Sbjct: 141 LDASYCGVPQARKRYFLIGELEGKDNFLEPYLFKNYASKPMTVFDYLGLSLG-------- 192 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 E + + + G Y + Y K Sbjct: 193 -IEYFYRHPRSYQRRGIFSIYEPSPTVRGVNRPIPKTYQK 231 >gi|161528981|ref|YP_001582807.1| DNA-cytosine methyltransferase [Nitrosopumilus maritimus SCM1] gi|160340282|gb|ABX13369.1| DNA-cytosine methyltransferase [Nitrosopumilus maritimus SCM1] Length = 360 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 31/92 (33%), Gaps = 7/92 (7%) Query: 7 GVPQRRERLYIIDFLNPSV-EFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQKR- 64 G+PQ+R+RL++ FLN L D++ K S H K+ Sbjct: 157 GLPQKRKRLFVTGFLNGHECNLNLIKIPVSCDNLFDVISGLPSIKQGTSGNEIMKHPKKF 216 Query: 65 -----KENNKIAGKGFGYGLFFENSATTNTLS 91 K+ + + NT+S Sbjct: 217 NSPYGKKLGGNINNLYNHWCTKHGEDVINTIS 248 >gi|329769196|ref|ZP_08260616.1| hypothetical protein HMPREF0433_00380 [Gemella sanguinis M325] gi|328839415|gb|EGF88993.1| hypothetical protein HMPREF0433_00380 [Gemella sanguinis M325] Length = 415 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 14/25 (56%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV 25 + A D+G+PQ+R R++I Sbjct: 170 INAGDYGMPQKRRRVFIFASKKNMK 194 >gi|24374531|ref|NP_718574.1| prophage LambdaSo, type II DNA modification methyltransferase, putative [Shewanella oneidensis MR-1] gi|24349120|gb|AAN56018.1|AE015737_16 prophage LambdaSo, type II DNA modification methyltransferase, putative [Shewanella oneidensis MR-1] Length = 557 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 ++ACD+G P R+RL++I +P P P Sbjct: 193 LRACDYGAPTIRKRLFMIA-RCDGQPIVWPQPTHGAP 228 >gi|307637157|gb|ADN79607.1| DNA cytosine methyltransferase [Helicobacter pylori 908] Length = 165 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 9/17 (52%), Positives = 13/17 (76%) Query: 1 MKACDFGVPQRRERLYI 17 + A D+GVPQ RER+ + Sbjct: 145 LNALDYGVPQVRERVIL 161 >gi|260431282|ref|ZP_05785253.1| DNA-cytosine methyltransferase [Silicibacter lacuscaerulensis ITI-1157] gi|260415110|gb|EEX08369.1| DNA-cytosine methyltransferase [Silicibacter lacuscaerulensis ITI-1157] Length = 497 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 15/26 (57%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 +KA D GVPQ R R+ I+ + + Sbjct: 228 IKAEDHGVPQARHRVIILGVRSDLAK 253 >gi|219882789|ref|YP_002477953.1| C-5 cytosine-specific DNA methylase [Arthrobacter chlorophenolicus A6] gi|219861795|gb|ACL42136.1| C-5 cytosine-specific DNA methylase [Arthrobacter chlorophenolicus A6] Length = 316 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 34/103 (33%), Gaps = 19/103 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFGVP RR R ++I V P P + L +K Sbjct: 181 LDAMDFGVPSRRRRAFLIAHKTQPVRIPQPAPGTARVSAAAALGWGAGEKIRT------- 233 Query: 61 HQKRKENNKIAGKGFGYGLFFENSAT-TNTLSARYY---KDGS 99 + K G LF ++ T AR + DGS Sbjct: 234 --------RANRKPGGGNLFSTDNPAWCLTEKARTWARESDGS 268 >gi|170698721|ref|ZP_02889786.1| DNA-cytosine methyltransferase [Burkholderia ambifaria IOP40-10] gi|170136346|gb|EDT04609.1| DNA-cytosine methyltransferase [Burkholderia ambifaria IOP40-10] Length = 353 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 28/90 (31%), Gaps = 1/90 (1%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQ 62 A D+G+PQ R+R+ +I P + + I D + + ++ Sbjct: 186 APDYGIPQSRDRVLLIFVRRDIDNVPVEPPKAFEGKHRSIEWAIGDLEQ-VGDESVPNQS 244 Query: 63 KRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + + S T+ A Sbjct: 245 QYFKAALARSGHGQGDEISRRSEPGYTVRA 274 >gi|86749313|ref|YP_485809.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2] gi|86572341|gb|ABD06898.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2] Length = 358 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL 39 + FGVPQ R RL ++ + + P P+G P Sbjct: 158 LDVSKFGVPQNRRRLVLLASK--FGDIRLPEPIGTPPTT 194 >gi|329851058|ref|ZP_08265815.1| modification methylase HphIA [Asticcacaulis biprosthecum C19] gi|328839904|gb|EGF89476.1| modification methylase HphIA [Asticcacaulis biprosthecum C19] Length = 557 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 6/23 (26%), Positives = 15/23 (65%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + + ++G+PQ+R R+ I+ + Sbjct: 276 IHSENYGIPQKRHRVIILGVRDD 298 >gi|323487264|ref|ZP_08092566.1| site-specific DNA methylase [Clostridium symbiosum WAL-14163] gi|323399405|gb|EGA91801.1| site-specific DNA methylase [Clostridium symbiosum WAL-14163] Length = 456 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 1/43 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 + A D+G P R R Y I F +P P K L Sbjct: 161 LVAADYGAPTTRRRWYAI-FRRDGKPIVWPEPTHSKIGADSRL 202 >gi|261736049|ref|YP_003257391.1| putative 5-methylcytosine methyltransferase [Streptomyces sp. ZL12] gi|261349172|gb|ACX71104.1| putative 5-methylcytosine methyltransferase [Streptomyces sp. ZL12] Length = 348 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 + A ++G PQ R R ++ L F P P + R Sbjct: 165 LSAEEYGTPQTRSRAFLAATLTGDARF--PEPTHRRYR 200 >gi|317048385|ref|YP_004116033.1| C-5 cytosine-specific DNA methylase [Pantoea sp. At-9b] gi|316950002|gb|ADU69477.1| C-5 cytosine-specific DNA methylase [Pantoea sp. At-9b] Length = 584 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 9/94 (9%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDD--------KST 52 ++ACD+G P R+R +++ +P P P+ + H+ + Sbjct: 193 LRACDYGAPTIRKRFFMV-MRCDGKPVMWPQPTHGDPKSLPVQSGHLKPWRTAAECIDWS 251 Query: 53 ISNKLWEGHQKRKENNKIAGKGFGYGLFFENSAT 86 I G K N + G F ++ T Sbjct: 252 IPCPSIFGRSKPLAENTMKRIARGIQRFVLDNPT 285 >gi|290243028|ref|YP_003494698.1| C-5 cytosine-specific DNA methylase [Thioalkalivibrio sp. K90mix] gi|288945533|gb|ADC73231.1| C-5 cytosine-specific DNA methylase [Thioalkalivibrio sp. K90mix] Length = 463 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 6/99 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF---PTPLGIKPRLGDILEEHIDDKSTISNKL 57 + + G ++R+R ++ F F + ++ DIL+ D K Sbjct: 284 IDGWEMGSLEKRKRFCLVATNEDLP-FDFAGLRPIRQREAQVADILDPIALDDPMW--KS 340 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 ++ ++ +K AGKGF + + TL Y K Sbjct: 341 YDYLAAKEVKDKAAGKGFRTQVQDGSQDGYGTLGRGYAK 379 >gi|168010951|ref|XP_001758167.1| predicted protein [Physcomitrella patens subsp. patens] gi|162690623|gb|EDQ76989.1| predicted protein [Physcomitrella patens subsp. patens] Length = 1579 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 19/34 (55%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A ++GV Q R+R +I + ++P P+ Sbjct: 1306 LQAGNYGVSQSRKRAFIWAAAPNEILPEWPEPMH 1339 >gi|216711|dbj|BAA14377.1| HgaI methylase [Avibacterium paragallinarum] gi|435623|dbj|BAA04206.1| HgaI methylase 1 [Avibacterium paragallinarum] gi|1090538|prf||2019268A HgaI restriction methylase:ISOTYPE=1 Length = 365 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 25/79 (31%), Gaps = 1/79 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G PQRR+R I ++ + P I I + S W Sbjct: 171 LDAADYGTPQRRKRAIIRLNKKGTI-WNLPLKQNIVSVEQAIGNLPSIESGKHSGLKWHY 229 Query: 61 HQKRKENNKIAGKGFGYGL 79 + E K G Sbjct: 230 GRGHTEQQIEWMKHTPTGK 248 >gi|462652|sp|P25282|MTG1_HAEGA RecName: Full=Modification methylase HgaIA; Short=M.HgaIA; AltName: Full=Cytosine-specific methyltransferase HgaIA; AltName: Full=M.HgaI-1 Length = 357 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 25/79 (31%), Gaps = 1/79 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G PQRR+R I ++ + P I I + S W Sbjct: 163 LDAADYGTPQRRKRAIIRLNKKGTI-WNLPLKQNIVSVEQAIGNLPSIESGKHSGLKWHY 221 Query: 61 HQKRKENNKIAGKGFGYGL 79 + E K G Sbjct: 222 GRGHTEQQIEWMKHTPTGK 240 >gi|110800293|ref|YP_695463.1| DNA-cytosine methyltransferase [Clostridium perfringens ATCC 13124] gi|110674940|gb|ABG83927.1| DNA-cytosine methyltransferase [Clostridium perfringens ATCC 13124] Length = 407 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 15/24 (62%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS 24 + A D+G QRR R++I + + + Sbjct: 162 INAADYGFSQRRRRVFIFAYKHDT 185 >gi|317148994|ref|XP_001823049.2| C-5 cytosine methyltransferase DmtA [Aspergillus oryzae RIB40] Length = 614 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 36/104 (34%), Gaps = 15/104 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++ ++GVPQ R+RL +I FP P + + TIS + Sbjct: 460 LRLLEYGVPQTRKRLLVIASGPGETLPPFPRPTH---------GPGLGEYPTISQAIQNI 510 Query: 61 HQKRKENNKIAGKGFGYGL-FFENSATTNTLSAR-----YYKDG 98 +++ A G ++ T++ Y+ G Sbjct: 511 PLGAPDHDVQAALSRGMDKPPYDPHRPAGTITCGGGDNNYHPSG 554 >gi|288801950|ref|ZP_06407391.1| modification methylase HgiDII (Cytosine-specific methyltransferase HgiDII) [Prevotella melaninogenica D18] gi|288335385|gb|EFC73819.1| modification methylase HgiDII (Cytosine-specific methyltransferase HgiDII) [Prevotella melaninogenica D18] Length = 355 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 16/42 (38%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 +GVPQ R R +I +V P + L D L Sbjct: 158 NMSYYGVPQSRRRFSLIATRLENVNIHLPKADDKETVLADYL 199 >gi|90408525|ref|ZP_01216682.1| DNA-methyltransferase (cytosine-specific) [Psychromonas sp. CNPT3] gi|90310344|gb|EAS38472.1| DNA-methyltransferase (cytosine-specific) [Psychromonas sp. CNPT3] Length = 380 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 31/69 (44%), Gaps = 8/69 (11%) Query: 1 MKACDFG-VPQRRERLYIIDFLN--PSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + + +PQ RER++I+ FL + +F L ++ D + T ++ Sbjct: 173 LNTKTYTTLPQNRERMFIVCFLKQSDADKFTLFEQLESIK-----IKSSDDQRRTNIARV 227 Query: 58 WEGHQKRKE 66 + H+ ++E Sbjct: 228 LDLHKSKEE 236 >gi|116193601|ref|XP_001222613.1| hypothetical protein CHGG_06518 [Chaetomium globosum CBS 148.51] gi|88182431|gb|EAQ89899.1| hypothetical protein CHGG_06518 [Chaetomium globosum CBS 148.51] Length = 748 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 31/100 (31%), Gaps = 8/100 (8%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHIDDKSTISNKLWEGHQ 62 +GVPQ R+RL +I P P G + + H+ Sbjct: 485 ASYGVPQLRKRLIMIGSAPGERLPPLPPPTHNKDGTCGLKPWATPKSVLSSISPTLI-HK 543 Query: 63 KRKENNKIAGKGFGYGLFFENSATTNTLSA----RYYKDG 98 + + + ++ + T++ Y+ DG Sbjct: 544 LHEPHLSKRFDP--PKVPWDATKLAKTITTNGGQNYHWDG 581 >gi|188575624|ref|YP_001912553.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520076|gb|ACD58021.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv. oryzae PXO99A] Length = 395 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%) Query: 1 MKACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLGIKP 37 + A +GVPQ R R I+ FP PL P Sbjct: 146 LYAPHYGVPQTRWRTIILGSRCGIDPTALFPEPLRQAP 183 >gi|159028410|emb|CAO89852.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 446 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 26/99 (26%), Gaps = 15/99 (15%) Query: 4 CDFGVPQRRERLYIIDFLNP-------SVEFKFPTPLGIK--------PRLGDILEEHID 48 D+GVPQ R+RL I N FP P K + D + Sbjct: 174 ADYGVPQNRQRLISIFTKNEKLKNYLKKNNSLFPKPTHSKEGLELPRWKTVRDAIYHLPP 233 Query: 49 DKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATT 87 S + + + + ++ Sbjct: 234 LDSQRKETAKSDDIPYHYVPLLDEEKYFWISNTPEEKSS 272 >gi|213972167|ref|ZP_03400254.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. tomato T1] gi|302063826|ref|ZP_07255367.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. tomato K40] gi|302134027|ref|ZP_07260017.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213923077|gb|EEB56685.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. tomato T1] Length = 471 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 36/98 (36%), Gaps = 2/98 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN--KLW 58 + FG + R R+ ++ + + E + L+ ++ K + Sbjct: 291 LDGAVFGAFESRSRMALVAYTEGAFEPLTLDQITPLRTREHSLKHLMEAVPETDESWKCY 350 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 + +++E + +GKGF L + + + Y K Sbjct: 351 DYLGRKEERDIASGKGFRRQLLTPEATSCGCIGRGYAK 388 >gi|52786706|ref|YP_092535.1| hypothetical protein BLi02974 [Bacillus licheniformis ATCC 14580] gi|319647238|ref|ZP_08001460.1| hypothetical protein HMPREF1012_02499 [Bacillus sp. BT1B_CT2] gi|52349208|gb|AAU41842.1| putative protein [Bacillus licheniformis ATCC 14580] gi|317390585|gb|EFV71390.1| hypothetical protein HMPREF1012_02499 [Bacillus sp. BT1B_CT2] Length = 256 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 4/37 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNP----SVEFKFPTPL 33 + A G PQRRER++ I ++ F P Sbjct: 180 LNAATMGAPQRRERVFFICRRKDLNLLPLKLSFNEPP 216 >gi|127485|sp|P16668|MTS3_STAAU RecName: Full=Modification methylase Sau3AI; Short=M.Sau3AI; AltName: Full=Cytosine-specific methyltransferase Sau3AI gi|153100|gb|AAA26673.1| Sau3AIM protein [Staphylococcus aureus] Length = 412 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 13/24 (54%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS 24 + A D+G QRR R++I + Sbjct: 162 INAADYGNAQRRRRVFIFGYKQDL 185 >gi|169829195|ref|YP_001699353.1| modification methylase SPRI [Lysinibacillus sphaericus C3-41] gi|168993683|gb|ACA41223.1| Modification methylase SPRI [Lysinibacillus sphaericus C3-41] Length = 418 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 5/29 (17%) Query: 1 MKACDFGV-----PQRRERLYIIDFLNPS 24 + DF PQ RER++I+ L + Sbjct: 148 LNTKDFSTKERPTPQNRERIFIVGHLRGT 176 >gi|284176374|ref|YP_003406650.1| C-5 cytosine-specific DNA methylase [Haloterrigena turkmenica DSM 5511] gi|284018031|gb|ADB63977.1| C-5 cytosine-specific DNA methylase [Haloterrigena turkmenica DSM 5511] Length = 618 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 21/61 (34%), Gaps = 7/61 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G Q R RL+I+ + P +P D D ++ W Sbjct: 200 LNAADYGEAQSRTRLFIMASQDT-------RPTAPEPTHVDADPAKPDRRTAADIIDWSD 252 Query: 61 H 61 Sbjct: 253 L 253 >gi|224982996|gb|ACN73414.1| c-5 cytosine specific DNA methylase [Acinetobacter sp. NFM2] Length = 441 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 1/39 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL 39 +KACDFG P R R ++I + +P P Sbjct: 166 LKACDFGSPTIRNRFFLIARRDGLP-IVWPKETHGNPNT 203 >gi|210630626|ref|ZP_03296529.1| hypothetical protein COLSTE_00414 [Collinsella stercoris DSM 13279] gi|210160401|gb|EEA91372.1| hypothetical protein COLSTE_00414 [Collinsella stercoris DSM 13279] Length = 402 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDI 42 ++GVPQRRER+ ++ V+ F+ I+ R I Sbjct: 292 NCANYGVPQRRERVIVLGAAQHVVDSFELAPITRIEVRTKSI 333 >gi|332711623|ref|ZP_08431554.1| DNA-methyltransferase [Lyngbya majuscula 3L] gi|332349601|gb|EGJ29210.1| DNA-methyltransferase [Lyngbya majuscula 3L] Length = 427 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 1/50 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV-EFKFPTPLGIKPRLGDILEEHIDD 49 ++A V Q+RER+ II FP L ++L++ Sbjct: 224 LRAQFLDVAQKRERVIIIAVRKDLDLNAIFPKEKDYTISLREVLKDCPKS 273 >gi|66044681|ref|YP_234522.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. syringae B728a] gi|63255388|gb|AAY36484.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. syringae B728a] Length = 471 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 40/98 (40%), Gaps = 2/98 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID--DKSTISNKLW 58 + FG + R R+ ++ + + E + L++ +D ++ S K + Sbjct: 291 LDGAVFGAFESRSRMALVAYTEGAFEPLTLDQITPLRTKERSLKDLMDVVPETDESWKCY 350 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 + +++E + +GKGF L + + + Y K Sbjct: 351 DYLGRKEERDIASGKGFRRQLLTPEATSCGCIGRGYAK 388 >gi|219871980|ref|YP_002476355.1| moodification methylase HgaIA [Haemophilus parasuis SH0165] gi|219692184|gb|ACL33407.1| moodification methylase HgaIA (M.HgaIA) (Cytosine-specific methyltransferase HgaIA) (M.HgaI-1) [Haemophilus parasuis SH0165] Length = 357 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 25/79 (31%), Gaps = 1/79 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G PQRR+R I ++ + P I I + S W Sbjct: 163 LDAADYGTPQRRKRAIIRLNKKGTI-WNLPLKQNIVSVEQAIGNLPSIESGKHSGLKWHY 221 Query: 61 HQKRKENNKIAGKGFGYGL 79 + E K G Sbjct: 222 GRGHTEQQIEWMKHTPTGK 240 >gi|87121096|ref|ZP_01076987.1| modification methylase (Cytosine-specific methyltransferase) [Marinomonas sp. MED121] gi|86163588|gb|EAQ64862.1| modification methylase (Cytosine-specific methyltransferase) [Marinomonas sp. MED121] Length = 513 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 2/62 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEF--KFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 +K+ D+G+PQ R R+ ++ + P + + L++ +S S + Sbjct: 243 IKSEDYGIPQARHRVILLGVREDLKQVPGTLKAPEKAAVTVKETLDDLPPLRSGFSKQKD 302 Query: 59 EG 60 G Sbjct: 303 NG 304 >gi|331000405|ref|ZP_08324080.1| DNA (cytosine-5-)-methyltransferase [Parasutterella excrementihominis YIT 11859] gi|329571737|gb|EGG53417.1| DNA (cytosine-5-)-methyltransferase [Parasutterella excrementihominis YIT 11859] Length = 392 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 32/87 (36%), Gaps = 12/87 (13%) Query: 6 FGVPQRRERLYIIDFLNPSVE--------FKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 +G+PQ R R +I V F+ P GI + + L++ D ++ Sbjct: 192 YGIPQARHRFILIGIRGDLVSPKNGEKLFFRVPKAPGIVTSVKEALKDIPD----WASNQ 247 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENS 84 + +Q + ++ G ++ Sbjct: 248 EKTNQSKVVMERLKFIRPGENVWQAED 274 >gi|255013132|ref|ZP_05285258.1| site-specific DNA methylase [Bacteroides sp. 2_1_7] Length = 423 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 1 MKACDFGVPQRRERLYIIDFLN 22 + A ++GVP+ RER+ I Sbjct: 214 LHAGNYGVPESRERVIFIGIRK 235 >gi|150009588|ref|YP_001304331.1| site-specific DNA methylase [Parabacteroides distasonis ATCC 8503] gi|256838307|ref|ZP_05543817.1| site-specific DNA methylase [Parabacteroides sp. D13] gi|149938012|gb|ABR44709.1| site-specific DNA methylase [Parabacteroides distasonis ATCC 8503] gi|256739226|gb|EEU52550.1| site-specific DNA methylase [Parabacteroides sp. D13] Length = 425 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 1 MKACDFGVPQRRERLYIIDFLN 22 + A ++GVP+ RER+ I Sbjct: 216 LHAGNYGVPESRERVIFIGIRK 237 >gi|70725582|ref|YP_252496.1| hypothetical protein SH0581 [Staphylococcus haemolyticus JCSC1435] gi|68446306|dbj|BAE03890.1| shlA1M [Staphylococcus haemolyticus JCSC1435] Length = 412 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 13/24 (54%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS 24 + A D+G QRR R++I + Sbjct: 162 INAADYGNAQRRRRVFIFGYKQDL 185 >gi|166368724|ref|YP_001660997.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843] gi|166091097|dbj|BAG05805.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843] Length = 189 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 16/27 (59%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEF 27 + +C GVPQ R+R ++I + +F Sbjct: 141 INSCYCGVPQTRKRYFLIGKMKEEDDF 167 >gi|251788110|ref|YP_003002831.1| DNA-cytosine methyltransferase [Dickeya zeae Ech1591] gi|247536731|gb|ACT05352.1| DNA-cytosine methyltransferase [Dickeya zeae Ech1591] Length = 490 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 16/26 (61%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A FGV QRR+R++++ ++ Sbjct: 183 LDAQYFGVAQRRKRVFLVASGRDDID 208 >gi|238894201|ref|YP_002918935.1| putative site-specific DNA methylase [Klebsiella pneumoniae NTUH-K2044] gi|238546517|dbj|BAH62868.1| putative site-specific DNA methylase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 656 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 1/43 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 ++ACD+G P R+R +++ +P P+ ++ Sbjct: 193 LRACDYGAPTIRKRFFMV-MRRDGQSIVWPAATHGDPKSPAVI 234 >gi|179506952|gb|ACB86652.1| EagI methylase [Pantoea agglomerans] Length = 401 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 15/42 (35%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 + A +GVPQ R R I FP P + + Sbjct: 155 LFAGHYGVPQMRFRTIFIAIYGHGKSISFPEPEYNAKAVANF 196 >gi|123441984|ref|YP_001005967.1| prophage encoded DNA modification methylase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088945|emb|CAL11755.1| prophage encoded DNA modification methylase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 452 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 11/27 (40%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFK 28 D+GVPQ R R ++ F Sbjct: 168 DCADWGVPQHRRRFILLGINIELFGFD 194 >gi|115455937|ref|NP_001051569.1| Os03g0798300 [Oryza sativa Japonica Group] gi|113550040|dbj|BAF13483.1| Os03g0798300 [Oryza sativa Japonica Group] Length = 413 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 ++A +GV Q R+R +I ++P P+ + ++ D K + K Sbjct: 156 LEAGAYGVAQSRKRAFIWAAAPGETLPEWPEPMHVFAS-PELKITLPDGKFYAAVK 210 >gi|108711567|gb|ABF99362.1| expressed protein [Oryza sativa Japonica Group] gi|215766031|dbj|BAG98259.1| unnamed protein product [Oryza sativa Japonica Group] Length = 376 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 ++A +GV Q R+R +I ++P P+ + ++ D K + K Sbjct: 119 LEAGAYGVAQSRKRAFIWAAAPGETLPEWPEPMHVFAS-PELKITLPDGKFYAAVK 173 >gi|332558666|ref|ZP_08412988.1| DNA-cytosine methyltransferase [Rhodobacter sphaeroides WS8N] gi|332276378|gb|EGJ21693.1| DNA-cytosine methyltransferase [Rhodobacter sphaeroides WS8N] Length = 510 Score = 39.2 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 12/19 (63%) Query: 6 FGVPQRRERLYIIDFLNPS 24 FGVPQRR R+ II + Sbjct: 242 FGVPQRRHRVIIIGIRSDL 260 >gi|311279157|ref|YP_003941388.1| C-5 cytosine-specific DNA methylase [Enterobacter cloacae SCF1] gi|308748352|gb|ADO48104.1| C-5 cytosine-specific DNA methylase [Enterobacter cloacae SCF1] Length = 659 Score = 39.2 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 ++ACD G P R+R +++ +P P P+ Sbjct: 193 LRACDHGTPTIRKRFFMV-MRCDGKPIVWPEPTHGDPK 229 >gi|314998281|ref|ZP_07863147.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium TX0133a01] gi|313587745|gb|EFR66590.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium TX0133a01] Length = 171 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 13/23 (56%), Gaps = 1/23 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + + + VPQ RER+++I Sbjct: 147 LNSKAY-VPQNRERIFLIGHSRD 168 >gi|325995748|gb|ADZ51153.1| DNA-cytosine methyltransferase [Helicobacter pylori 2018] Length = 160 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 9/16 (56%), Positives = 12/16 (75%) Query: 1 MKACDFGVPQRRERLY 16 + A D+GVPQ RER+ Sbjct: 145 LNALDYGVPQVRERVI 160 >gi|298373979|ref|ZP_06983937.1| modification methylase BepI [Bacteroides sp. 3_1_19] gi|298268347|gb|EFI10002.1| modification methylase BepI [Bacteroides sp. 3_1_19] Length = 425 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 1 MKACDFGVPQRRERLYIIDFLN 22 + A ++GVP+ RER+ I Sbjct: 216 LHAGNYGVPESRERVIFIGIRK 237 >gi|291535263|emb|CBL08375.1| DNA-methyltransferase (dcm) [Roseburia intestinalis M50/1] Length = 350 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Query: 5 DFGVPQRRERLYIIDFL-NPSVEFKFPTPLGIK 36 ++G+PQ R R+ I+ N +V ++ P+P + Sbjct: 159 EYGIPQARHRIIIVGIRNNINVTYRVPSPEPYR 191 >gi|154482791|ref|ZP_02025239.1| hypothetical protein EUBVEN_00468 [Eubacterium ventriosum ATCC 27560] gi|149736386|gb|EDM52272.1| hypothetical protein EUBVEN_00468 [Eubacterium ventriosum ATCC 27560] Length = 193 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 15/19 (78%) Query: 1 MKACDFGVPQRRERLYIID 19 + A +GVPQRR+R+Y+I Sbjct: 123 LDAQYWGVPQRRKRIYLIG 141 >gi|301311774|ref|ZP_07217699.1| modification methylase BepI [Bacteroides sp. 20_3] gi|300830334|gb|EFK60979.1| modification methylase BepI [Bacteroides sp. 20_3] Length = 425 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 1 MKACDFGVPQRRERLYIIDFLN 22 + A ++GVP+ RER+ I Sbjct: 216 LHAGNYGVPESRERVIFIGIRK 237 >gi|14520267|ref|NP_125742.1| modification methylase [Pyrococcus abyssi GE5] gi|5457482|emb|CAB48973.1| Citosine-specific modificatrion methylase [Pyrococcus abyssi GE5] Length = 309 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDD 49 + A D+G PQ R R++I + P + ++ D L+ D Sbjct: 152 LNALDYGAPQVRRRVFISNLELK------PKKIKGPRKVWDALKNIPID 194 >gi|254876424|ref|ZP_05249134.1| predicted protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842445|gb|EET20859.1| predicted protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 458 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 30/105 (28%), Gaps = 17/105 (16%) Query: 1 MKACDFGVPQRRERLYIIDFLNP----SVEFKFPTPLGIKPRLGD------ILEEHIDDK 50 + A +GV Q R R+ ++ F + D + Sbjct: 179 LNAMHYGVAQHRPRVMLLAIREDIAITKNIFSLDNIWKSEDYYEDKEISPLCPIPTVKQN 238 Query: 51 STIS-----NKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTL 90 + + L +G + N GF + + + NT+ Sbjct: 239 KYYNVEDALSDLIDGAKTSYLNKINKKSGFKNVIKTKFNE--NTI 281 >gi|308805851|ref|XP_003080237.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri] gi|116058697|emb|CAL54404.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri] Length = 382 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 36/100 (36%), Gaps = 12/100 (12%) Query: 7 GVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDD---KSTISNKLWEGHQK 63 GVP RER Y+I + F PTP ++ R D + + + + ++ L + + Sbjct: 186 GVPNTRERYYLIATRS-PGGFSEPTPTWLRGRAIDAAGQFVGEASTSQSTTSTLADYIRT 244 Query: 64 RKENNKI--------AGKGFGYGLFFENSATTNTLSARYY 95 +N + S +T ++ Y Sbjct: 245 ECDNEDELVLGSEMIRKYWRVLDVVTPTSKRCSTFTSGYA 284 >gi|259046940|ref|ZP_05737341.1| modification methylase Sau3AI (cytosine-specificmethyltransferase Sau3AI) [Granulicatella adiacens ATCC 49175] gi|259036383|gb|EEW37638.1| modification methylase Sau3AI (cytosine-specificmethyltransferase Sau3AI) [Granulicatella adiacens ATCC 49175] Length = 451 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 15/24 (62%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS 24 + A D+G PQRR R++ + N S Sbjct: 176 INAADYGAPQRRRRVFFFIYKNDS 199 >gi|221232587|ref|YP_002511741.1| DNA modification methylase [Streptococcus pneumoniae ATCC 700669] gi|220675049|emb|CAR69627.1| putative DNA modification methylase [Streptococcus pneumoniae ATCC 700669] Length = 421 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 34/91 (37%), Gaps = 3/91 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A ++G QRR R++ + N +V F + + + E I N+ Sbjct: 159 INAAEYGRSQRRRRVFFFVYRNDTV---FAQKIDNLYEKNEEIFEDNRYDDYIFNQGLFA 215 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 Q + + + Y L + ++T + Sbjct: 216 KQFPIKPIAVKNRHVFYELPNDIVEVSDTFT 246 >gi|56899928|ref|YP_173301.1| phage-related DNA methylase, N-terminal region [Bacillus thuringiensis serovar konkukian str. 97-27] gi|56800362|gb|AAW31029.1| phage-related DNA methylase, N-terminal region [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 239 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 19/63 (30%), Gaps = 6/63 (9%) Query: 1 MKACDFG-----VPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTIS 54 + DF VPQ RER++II FP ++ Sbjct: 151 LNTRDFSTAERPVPQNRERVFIIGHSRTKRTRKVFPIRREAAQNRIKVIGNTNSSGWRRG 210 Query: 55 NKL 57 +L Sbjct: 211 GEL 213 >gi|304441893|gb|ADM34182.1| DNA methyltransferase 1 [Aplysia californica] Length = 405 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 21/55 (38%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ +P P L +DD+ SN Sbjct: 74 LQAGSYGVAQTRRRAIILAAAPGEKLPVYPEPQHTFAPRAMQLSVMVDDRKFNSN 128 >gi|311977235|gb|ADQ20493.1| M.BsaAI [Geobacillus stearothermophilus] Length = 360 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 1/52 (1%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTI 53 A D+G+PQ R+RL I F + +F + + K Sbjct: 86 DAADYGIPQNRKRLITI-FTRSEIGKEFFELTNSFIPETTHSQNGENGKKKW 136 >gi|159029640|emb|CAO87718.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 306 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 30/90 (33%), Gaps = 12/90 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + +C GVPQ R+R ++I + +F + +++ + E Sbjct: 141 INSCYCGVPQTRKRYFMIGKMKEEDDFLIDEINENLSSQPLTVFDYMGKELD-----IEY 195 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTL 90 + + + + Y + T+ Sbjct: 196 YYRHPRSYQRRAIFSIY-------EPSPTI 218 >gi|323487868|ref|ZP_08093126.1| type II modification methyltransferase [Planococcus donghaensis MPA1U2] gi|323398602|gb|EGA91390.1| type II modification methyltransferase [Planococcus donghaensis MPA1U2] Length = 420 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 15/23 (65%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + A ++G+ QRR R++I + N Sbjct: 165 INAAEYGLAQRRRRVFIFAYKNG 187 >gi|166362816|ref|YP_001655089.1| cytosine specific DNA methyltransferase [Microcystis aeruginosa NIES-843] gi|166085189|dbj|BAF99896.1| cytosine specific DNA methyltransferase [Microcystis aeruginosa NIES-843] Length = 261 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 2/35 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A +GVPQ R R + + L P Sbjct: 35 LNAAYYGVPQTRSRAFFLASLERLP--SLPQATHS 67 >gi|117620606|ref|YP_855619.1| modification methylase DdeI [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562013|gb|ABK38961.1| modification methylase DdeI [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 440 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 6/94 (6%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEE------HIDDKSTISNK 56 + D+GVPQRR R +I + P RL + + + K I + Sbjct: 179 SSDWGVPQRRPRFILIAKFGVPSDLFNPFEDIDAFRLNFLNMKGLNSNSPVSAKDAIYDL 238 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTL 90 + +K+ G F + T+ Sbjct: 239 EIFDSKNKKKKLIENTDSGQTGFFELDYKPPKTI 272 >gi|2906004|gb|AAC03766.1| C5-DNA-methyltransferase [Ascobolus immersus] Length = 1356 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 18/59 (30%), Gaps = 9/59 (15%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 + ++GVPQ R R+ + P P+ + D + H Sbjct: 969 SGEYGVPQSRPRVIFLAARMGERLPDLPEPMH---------AFEVLDSQYALPHIKRYH 1018 >gi|241667884|ref|ZP_04755462.1| C-5 cytosine-specific DNA methylase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 457 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 30/105 (28%), Gaps = 17/105 (16%) Query: 1 MKACDFGVPQRRERLYIIDFLNP----SVEFKFPTPLGIKPRLGD------ILEEHIDDK 50 + A +GV Q R R+ ++ F + D + Sbjct: 178 LNAMHYGVAQHRPRVMLLAIREDIAITKNIFSLDNIWKSEDYYEDKEISPLCPIPTVKQN 237 Query: 51 STIS-----NKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTL 90 + + L +G + N GF + + + NT+ Sbjct: 238 KYYNVEDALSDLIDGAKTSYLNKINKKSGFKNVIKTKFNE--NTI 280 >gi|227547415|ref|ZP_03977464.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212062|gb|EEI79958.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 433 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 14/19 (73%) Query: 1 MKACDFGVPQRRERLYIID 19 + A ++G+PQRR R+YI Sbjct: 188 INAAEYGMPQRRRRVYIYA 206 >gi|20531189|gb|AAM27408.1|AF500227_1 RIP defective [Neurospora crassa] Length = 845 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 14/33 (42%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 +G+PQ R RL +I FP+P Sbjct: 432 NFSHYGLPQPRRRLIMIGAGPGEKLPPFPSPTH 464 >gi|23465149|ref|NP_695752.1| modification methylase Sau3AI [Bifidobacterium longum NCC2705] gi|189440221|ref|YP_001955302.1| site-specific DNA methylase [Bifidobacterium longum DJO10A] gi|23325769|gb|AAN24388.1| modification methylase Sau3AI [Bifidobacterium longum NCC2705] gi|189428656|gb|ACD98804.1| Site-specific DNA methylase [Bifidobacterium longum DJO10A] Length = 423 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 14/19 (73%) Query: 1 MKACDFGVPQRRERLYIID 19 + A ++G+PQRR R+YI Sbjct: 178 INAAEYGMPQRRRRVYIYA 196 >gi|240047619|ref|YP_002961007.1| Cytosine-specific methyltransferase [Mycoplasma conjunctivae HRC/581] gi|239985191|emb|CAT05204.1| Cytosine-specific methyltransferase [Mycoplasma conjunctivae] Length = 409 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 2/78 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE--FKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A DFG QRR+RL+ + +L F F K + +++ HI + + + Sbjct: 217 LDAGDFGSSQRRKRLFCVSWLENKFNNYFSFWDINKWKNKYDNLIINHIINHEHNTPENN 276 Query: 59 EGHQKRKENNKIAGKGFG 76 + K N K G Sbjct: 277 LFGKLIKPENLPEFKKNG 294 >gi|147771321|emb|CAN71866.1| hypothetical protein VITISV_027340 [Vitis vinifera] Length = 374 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 18/34 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +GV Q R+R++I ++P P+ Sbjct: 119 LEAGAYGVSQSRKRVFIWAASPEETLPEWPEPMH 152 >gi|2956677|emb|CAB09661.1| DNA-C5-methyltransferase [Ascobolus immersus] Length = 1336 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 18/59 (30%), Gaps = 9/59 (15%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 + ++GVPQ R R+ + P P+ + D + H Sbjct: 969 SGEYGVPQSRPRVIFLAARMGERLPDLPEPMH---------AFEVLDSQYALPHIKRYH 1018 >gi|270265139|ref|ZP_06193402.1| hypothetical protein SOD_k01780 [Serratia odorifera 4Rx13] gi|270041073|gb|EFA14174.1| hypothetical protein SOD_k01780 [Serratia odorifera 4Rx13] Length = 350 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 36/110 (32%), Gaps = 24/110 (21%) Query: 6 FGVPQRRERLYIIDFLNPSVE---------------FKFPTPLGIKPRLGDILEEHIDDK 50 +GVPQRR+R+ ++ + + + P P L D + + D Sbjct: 161 YGVPQRRKRMILLASKHGDITEPEKSVNPKTVKDAIYHLPIPGNGDDSLHDFIPKRTDKI 220 Query: 51 STISNKLWEGHQKRKENNK------IAGKGFGYGLFFEN---SATTNTLS 91 + + + RK+ + GY + + T++ Sbjct: 221 KEMIRHVPKDGGSRKDLPRNFWLPCHLKNSDGYRDVYGRMSWDKVSPTIT 270 >gi|54026007|ref|YP_120249.1| hypothetical protein nfa40370 [Nocardia farcinica IFM 10152] gi|54017515|dbj|BAD58885.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 592 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 15/25 (60%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV 25 + + FGVPQ R+RLYI+ + Sbjct: 199 LNSMFFGVPQSRDRLYIVFWDRRMP 223 >gi|75233438|sp|Q7Y1I7|DNM1A_ORYSJ RecName: Full=DNA (cytosine-5)-methyltransferase 1A; Short=OsMET1a; AltName: Full=DNA methyltransferase 1-1; Short=OsMET1-1 gi|31126751|gb|AAP44671.1| putative DNA (cytosine-5-)-methyltransferase [Oryza sativa Japonica Group] gi|171196101|dbj|BAG15928.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica Group] gi|222625970|gb|EEE60102.1| hypothetical protein OsJ_12965 [Oryza sativa Japonica Group] Length = 1527 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 ++A +GV Q R+R +I ++P P+ + ++ D K + K Sbjct: 1270 LEAGAYGVAQSRKRAFIWAAAPGETLPEWPEPMHVFAS-PELKITLPDGKFYAAVK 1324 >gi|18653391|gb|AAL77415.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica Group] Length = 1522 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 ++A +GV Q R+R +I ++P P+ + ++ D K + K Sbjct: 1265 LEAGAYGVAQSRKRAFIWAAAPGETLPEWPEPMHVFAS-PELKITLPDGKFYAAVK 1319 >gi|329955696|ref|ZP_08296604.1| DNA (cytosine-5-)-methyltransferase [Bacteroides clarus YIT 12056] gi|328526099|gb|EGF53123.1| DNA (cytosine-5-)-methyltransferase [Bacteroides clarus YIT 12056] Length = 465 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 1 MKACDFGVPQRRERLYIIDFLN 22 + A ++GVP+ RER+ I Sbjct: 256 LHAGNYGVPESRERVIFIGVRK 277 >gi|164429650|ref|XP_001728555.1| hypothetical protein NCU11205 [Neurospora crassa OR74A] gi|157073563|gb|EDO65464.1| hypothetical protein NCU11205 [Neurospora crassa OR74A] Length = 654 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 14/33 (42%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 +G+PQ R RL +I FP+P Sbjct: 241 NFSHYGLPQPRRRLIMIGAGPGEKLPPFPSPTH 273 >gi|157952312|ref|YP_001497204.1| hypothetical protein NY2A_B008R [Paramecium bursaria Chlorella virus NY2A] gi|155122539|gb|ABT14407.1| hypothetical protein NY2A_B008R [Paramecium bursaria Chlorella virus NY2A] Length = 331 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 36/121 (29%), Gaps = 29/121 (23%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEE------HIDDKSTISNKLWE 59 F VPQRR+R+ + FP P ++ LE ++ NKL + Sbjct: 154 FCVPQRRKRVIFFCCKHSMPIL-FPEPTTDVIKIRSYLENVSSGCVELNGIYIPQNKLIK 212 Query: 60 GH-----QKRKENNKIAGKGFGYGLFFEN-------SATTNTLSARYY----------KD 97 + K+ YG T T++ Y KD Sbjct: 213 TTNVDNCKAHPMLVKLTNGKITYGKRTPTSGEAIDVDQPTKTIACSYSFCPRLFVPIEKD 272 Query: 98 G 98 G Sbjct: 273 G 273 >gi|16945407|emb|CAC10091.2| related to cytosine C5-DNA methyltransferase [Neurospora crassa] Length = 742 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 14/33 (42%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 +G+PQ R RL +I FP+P Sbjct: 432 NFSHYGLPQPRRRLIMIGAGPGEKLPPFPSPTH 464 >gi|317473510|ref|ZP_07932802.1| C-5 cytosine-specific DNA methylase [Anaerostipes sp. 3_2_56FAA] gi|316899021|gb|EFV21043.1| C-5 cytosine-specific DNA methylase [Anaerostipes sp. 3_2_56FAA] Length = 385 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEF 27 + A GVPQ+R+R + I L +F Sbjct: 141 LDASKCGVPQKRKRFFCIGALGKDDDF 167 >gi|296084835|emb|CBI27717.3| unnamed protein product [Vitis vinifera] Length = 1417 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 18/34 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +GV Q R+R++I ++P P+ Sbjct: 1162 LEAGAYGVSQSRKRVFIWAASPEETLPEWPEPMH 1195 >gi|120402107|ref|YP_951936.1| DNA-cytosine methyltransferase [Mycobacterium vanbaalenii PYR-1] gi|119954925|gb|ABM11930.1| DNA-cytosine methyltransferase [Mycobacterium vanbaalenii PYR-1] Length = 386 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 11/22 (50%) Query: 4 CDFGVPQRRERLYIIDFLNPSV 25 D GVPQ R+RL ++ Sbjct: 174 ADLGVPQHRDRLIVVGVRRDLG 195 >gi|50365124|ref|YP_053549.1| modification methylase Sau3AI (GATC cytosine-specific methyltransferase) [Mesoplasma florum L1] gi|50363680|gb|AAT75665.1| modification methylase Sau3AI (GATC cytosine-specific methyltransferase) [Mesoplasma florum L1] Length = 404 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 1/76 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G QRR R++I+ + + + I + K I K + Sbjct: 158 INAGDYGYVQRRRRVFILAWRKEKLNIQ-KELNISDAFHKGIFRKGFKVKKFILEKEIDL 216 Query: 61 HQKRKENNKIAGKGFG 76 + + + +G Sbjct: 217 NIFSDKVDVTENYNYG 232 >gi|327356173|gb|EGE85030.1| cytosine-specific methyltransferase [Ajellomyces dermatitidis ATCC 18188] Length = 1233 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 28/95 (29%), Gaps = 7/95 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP------RLGDILEEHIDDKSTIS 54 + A FG PQ R RL+I+ P P LG+ K Sbjct: 820 LDAWSFGAPQSRSRLFIVIAAPGLQLPAHPPLTHSHPPKTTQKSLGEAPNGLPFGKRHWE 879 Query: 55 NKLWEGHQKRKE-NNKIAGKGFGYGLFFENSATTN 88 +++ + + + + + + T Sbjct: 880 IPVFDFLPISQSLKDLPRIRTGITPIDYPDHRPTR 914 >gi|261203805|ref|XP_002629116.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis SLH14081] gi|239586901|gb|EEQ69544.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis SLH14081] gi|239608866|gb|EEQ85853.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis ER-3] Length = 1233 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 28/95 (29%), Gaps = 7/95 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP------RLGDILEEHIDDKSTIS 54 + A FG PQ R RL+I+ P P LG+ K Sbjct: 820 LDAWSFGAPQSRSRLFIVIAAPGLQLPAHPPLTHSHPPKTTQKSLGEAPNGLPFGKRHWE 879 Query: 55 NKLWEGHQKRKE-NNKIAGKGFGYGLFFENSATTN 88 +++ + + + + + + T Sbjct: 880 IPVFDFLPISQSLKDLPRIRTGITPIDYPDHRPTR 914 >gi|225463169|ref|XP_002267284.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1535 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 18/34 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +GV Q R+R++I ++P P+ Sbjct: 1275 LEAGAYGVSQSRKRVFIWAASPEETLPEWPEPMH 1308 >gi|218193912|gb|EEC76339.1| hypothetical protein OsI_13909 [Oryza sativa Indica Group] Length = 1527 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 ++A +GV Q R+R +I ++P P+ + ++ D K + K Sbjct: 1270 LEAGAYGVAQSRKRAFIWAAAPGETLPEWPEPMHVFAS-PELKITLPDGKFYAAVK 1324 >gi|228944657|ref|ZP_04107027.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228815117|gb|EEM61368.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 427 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 13/98 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G QRR R++I +L S + + + +IL DK + ++ Sbjct: 156 INAADYGNSQRRRRVFIFAYLRESHFAS----VQNEMKSLEIL----SDKGFFAP-IFNV 206 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 H E + K + L + ++T A YY G Sbjct: 207 H----EAPEENKKRGQFELPVDIIEVSDTFKAEYYNSG 240 >gi|83771786|dbj|BAE61916.1| unnamed protein product [Aspergillus oryzae] Length = 586 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 17/34 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++ ++GVPQ R+RL +I FP P Sbjct: 460 LRLLEYGVPQTRKRLLVIASGPGETLPPFPRPTH 493 >gi|228931114|ref|ZP_04094051.1| Phage-related DNA methylase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228828566|gb|EEM74265.1| Phage-related DNA methylase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 221 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 19/63 (30%), Gaps = 6/63 (9%) Query: 1 MKACDFG-----VPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTIS 54 + DF VPQ RER++II FP ++ Sbjct: 133 LNTRDFSTAERPVPQNRERVFIIGHSRTKRTRKVFPIRREAAQNRIKVIGNTNSSGWRRG 192 Query: 55 NKL 57 +L Sbjct: 193 GEL 195 >gi|20531191|gb|AAM27409.1|AF500228_1 RIP defective [Neurospora intermedia] Length = 839 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 14/33 (42%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 +G+PQ R RL +I FP+P Sbjct: 434 NFSHYGLPQPRRRLIMIGAGPGEKLPPFPSPTH 466 >gi|189350232|ref|YP_001945860.1| DNA (cytosine-5-)-methyltransferase [Burkholderia multivorans ATCC 17616] gi|189334254|dbj|BAG43324.1| DNA (cytosine-5-)-methyltransferase [Burkholderia multivorans ATCC 17616] Length = 380 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 15/23 (65%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + A FG+PQ+R R++++ L Sbjct: 144 LDAQYFGIPQQRRRVFVVARLGD 166 >gi|238922584|ref|YP_002936097.1| modification methylase, putative [Eubacterium rectale ATCC 33656] gi|238874256|gb|ACR73963.1| modification methylase, putative [Eubacterium rectale ATCC 33656] Length = 433 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 16/21 (76%) Query: 1 MKACDFGVPQRRERLYIIDFL 21 + A +FG+PQ+RER Y+I L Sbjct: 227 LNAQNFGIPQKRERAYMISIL 247 >gi|68655480|emb|CAJ01710.1| putative cytosine-5 DNA methyltransferase [Hordeum vulgare subsp. vulgare] Length = 251 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 1/52 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKST 52 ++A FGV Q R+R +I +P P+ + ++ D K Sbjct: 145 LEAGTFGVAQSRKRAFIWAAAPGENLPDWPEPMHVFAS-PELKITLPDGKYY 195 >gi|206575823|ref|YP_002238687.1| putative DNA modification methylase [Klebsiella pneumoniae 342] gi|206564881|gb|ACI06657.1| putative DNA modification methylase [Klebsiella pneumoniae 342] Length = 523 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 ++ACD+G P R+R +++ + +P P+ +L Sbjct: 24 LRACDYGAPTIRKRFFMVMRCDGKPT-VWPEATHGDPKSPAVL 65 >gi|325270514|ref|ZP_08137114.1| modification methylase HindV [Prevotella multiformis DSM 16608] gi|324987090|gb|EGC19073.1| modification methylase HindV [Prevotella multiformis DSM 16608] Length = 320 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 16/27 (59%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEF 27 + A GVPQRR+R +++ L + F Sbjct: 142 LNAALCGVPQRRKRFFMVGRLGAADGF 168 >gi|78778763|ref|YP_396875.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT 9312] gi|78712262|gb|ABB49439.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT 9312] Length = 686 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 6/70 (8%) Query: 1 MKACDFGVPQRRERLYIIDFL-NPSVEFKFPTPL----GIKPRLGDILEEHIDDKSTISN 55 + A +GVPQ R RL+I N K+P P L + + + K + Sbjct: 212 IYAWQYGVPQLRPRLFISGTKINECAPMKWPKPKYDSVEEAVTLDEAISDLPPLKGGWNE 271 Query: 56 KLWEGHQKRK 65 K W+ + Sbjct: 272 K-WDEKYSYE 280 >gi|88706064|ref|ZP_01103772.1| C-5 cytosine-specific DNA methylase [Congregibacter litoralis KT71] gi|88699778|gb|EAQ96889.1| C-5 cytosine-specific DNA methylase [Congregibacter litoralis KT71] Length = 322 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 21/36 (58%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 +CD+GVPQ R+RL ++ L+ +E PT + Sbjct: 124 DSCDYGVPQSRKRLVLLASLHGDIELVPPTTPKPRT 159 >gi|332657980|gb|AEE83380.1| DNA methyltransferase 2 [Arabidopsis thaliana] Length = 1545 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 29/93 (31%), Gaps = 5/93 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++A +GV Q R+R+ I V ++P P+ + G + + G Sbjct: 1282 LEAGTYGVSQPRKRVIIWAASPEEVLPEWPEPMHVFDNPGSKISLPRGLRYDAGCNTKFG 1341 Query: 61 HQKRKENNKIAGKG-----FGYGLFFENSATTN 88 R + G + TT Sbjct: 1342 APFRSITVRDTIGDLPPVENGESKINKEYGTTP 1374 >gi|312200730|ref|YP_004020791.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c] gi|311232066|gb|ADP84921.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c] Length = 464 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 12/21 (57%) Query: 2 KACDFGVPQRRERLYIIDFLN 22 A +FGVPQ RERL + Sbjct: 180 DAANFGVPQTRERLLFLGVRR 200 >gi|291521423|emb|CBK79716.1| DNA-methyltransferase (dcm) [Coprococcus catus GD/7] Length = 521 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 41/113 (36%), Gaps = 18/113 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLGIKPRL-----GDILEEHIDDKST 52 + + FGVPQ R R +I + + E + P G + GD+ + +D++ Sbjct: 310 INSLWFGVPQERRRFIMIGVRSDIIQEKEIEMPEGNGAEIVTVGQAIGDLRDYEVDEEDN 369 Query: 53 ISNKL-----WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYY--KDG 98 KL E + +G + ++ AR+ K+G Sbjct: 370 EPEKLPYDSSTENLSDYARIMRKGSEGISNHIVPKSRDKAK---ARFAALKEG 419 >gi|15236413|ref|NP_193150.1| DMT2 (DNA METHYLTRANSFERASE 2); DNA (cytosine-5-)-methyltransferase/ DNA binding / protein binding [Arabidopsis thaliana] gi|2244770|emb|CAB10193.1| (cytosine-5-)-methyltransferase [Arabidopsis thaliana] gi|7268119|emb|CAB78456.1| (cytosine-5-)-methyltransferase [Arabidopsis thaliana] gi|332657979|gb|AEE83379.1| DNA methyltransferase 2 [Arabidopsis thaliana] Length = 1519 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 29/93 (31%), Gaps = 5/93 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++A +GV Q R+R+ I V ++P P+ + G + + G Sbjct: 1256 LEAGTYGVSQPRKRVIIWAASPEEVLPEWPEPMHVFDNPGSKISLPRGLRYDAGCNTKFG 1315 Query: 61 HQKRKENNKIAGKG-----FGYGLFFENSATTN 88 R + G + TT Sbjct: 1316 APFRSITVRDTIGDLPPVENGESKINKEYGTTP 1348 >gi|325857409|ref|ZP_08172464.1| DNA (cytosine-5-)-methyltransferase [Prevotella denticola CRIS 18C-A] gi|325483119|gb|EGC86099.1| DNA (cytosine-5-)-methyltransferase [Prevotella denticola CRIS 18C-A] Length = 320 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 16/27 (59%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEF 27 + A GVPQRR+R +++ L + F Sbjct: 142 LNAALCGVPQRRKRFFMVGRLGAADGF 168 >gi|300775991|ref|ZP_07085850.1| possible DNA (cytosine-5-)-methyltransferase [Chryseobacterium gleum ATCC 35910] gi|300505124|gb|EFK36263.1| possible DNA (cytosine-5-)-methyltransferase [Chryseobacterium gleum ATCC 35910] Length = 415 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 13/25 (52%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE 26 D+GVPQ+R R +I N V Sbjct: 170 NFGDYGVPQKRTRFILIGVRNDIVN 194 >gi|226293429|gb|EEH48849.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb18] Length = 1311 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 31/100 (31%), Gaps = 8/100 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK------PRLGDILEEHIDDKSTIS 54 + A FG PQ R RL+I + P LGD K Sbjct: 897 LDAWSFGAPQSRSRLFIFIAVPGLQLPAHPPLTHSHLSKTTQKSLGDAPNGLPFGKRRWD 956 Query: 55 NKLWEGHQKRKENNK--IAGKGFGYGLFFENSATTNTLSA 92 +++ K G+G + + + T T SA Sbjct: 957 IPVFDFLSVSKSLMDLPRIGRGKITPVAYPDHRTIRTESA 996 >gi|225684039|gb|EEH22323.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb03] Length = 1336 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 31/100 (31%), Gaps = 8/100 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK------PRLGDILEEHIDDKSTIS 54 + A FG PQ R RL+I + P LGD K Sbjct: 922 LDAWSFGAPQSRSRLFIFIAVPGLQLPAHPPLTHSHLSKTTQKSLGDAPNGLPFGKRRWD 981 Query: 55 NKLWEGHQKRKENNK--IAGKGFGYGLFFENSATTNTLSA 92 +++ K G+G + + + T T SA Sbjct: 982 IPVFDFLSVSKSLMDLPRIGRGKITPVAYPDHRTIRTESA 1021 >gi|23306234|emb|CAD43089.1| DNA methyltransferase 1e [Paracentrotus lividus] Length = 1335 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 17/38 (44%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 ++A +GVPQ R R I+ +P PL + Sbjct: 1292 LQAGQYGVPQTRRRAIILAAAPGEKLPFYPEPLHVFST 1329 >gi|53729085|ref|ZP_00134186.2| COG0270: Site-specific DNA methylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307257255|ref|ZP_07539025.1| Modification methylase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306864105|gb|EFM96018.1| Modification methylase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 354 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 17/42 (40%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 ++GVPQ R+R +I + + + D+L Sbjct: 161 NTKNYGVPQSRKRFTLIANRVTQDKLEPLELKDKVLTVRDVL 202 >gi|91069833|gb|ABE10765.1| C-5 cytosine-specific DNA methylase [uncultured Prochlorococcus marinus clone ASNC1092] Length = 686 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 4/69 (5%) Query: 1 MKACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLGIKPRLGDILEEHIDDKSTIS---NK 56 + A +GVPQ R RL+I N K+P P L+E I D + ++ Sbjct: 212 IYAWQYGVPQLRPRLFISGTKINECAPMKWPKPKFDSVEEAVTLDEAISDLPPLKGGWDE 271 Query: 57 LWEGHQKRK 65 W+ + Sbjct: 272 KWDEKYSYE 280 >gi|315230475|ref|YP_004070911.1| DNA-cytosine methyltransferase [Thermococcus barophilus MP] gi|315183503|gb|ADT83688.1| DNA-cytosine methyltransferase [Thermococcus barophilus MP] Length = 321 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 6/50 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDK 50 + A D+G QRR+R++I + P + K + D++ + D + Sbjct: 153 LDAQDYGTAQRRKRVFISNIRIK------PKRVRGKLTVWDVIGDLPDPR 196 >gi|325695618|gb|EGD37518.1| modification methylase SinI [Streptococcus sanguinis SK150] Length = 471 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 10/77 (12%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP---------RLGDILEEHIDDKST 52 A +FG PQ+RER II L + + TP + LGD++ + T Sbjct: 236 NAANFGAPQKRERFVIIAKLGDQ-KVPYLTPTHSEKGEYGLPKWVTLGDVISDIQGKPMT 294 Query: 53 ISNKLWEGHQKRKENNK 69 S + K+ + Sbjct: 295 HSEIPPKRIDWYKKIPE 311 >gi|126208670|ref|YP_001053895.1| modification methylase [Actinobacillus pleuropneumoniae L20] gi|126097462|gb|ABN74290.1| modification methylase [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 364 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 17/42 (40%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 ++GVPQ R+R +I + + + D+L Sbjct: 171 NTKNYGVPQSRKRFTLIANRVTQDKLEPLELKDKVLTVRDVL 212 >gi|2894386|emb|CAA74996.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase (C1) [Bacillus pumilus] Length = 398 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 16/27 (59%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEF 27 + A DFG+PQ R R +++ L P + Sbjct: 157 INAADFGIPQERIRFFMVASLGPVPDL 183 >gi|240145560|ref|ZP_04744161.1| putative C-5 cytosine-specific DNA methylase [Roseburia intestinalis L1-82] gi|257202377|gb|EEV00662.1| putative C-5 cytosine-specific DNA methylase [Roseburia intestinalis L1-82] Length = 586 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 16/40 (40%), Gaps = 1/40 (2%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 A D+G P R+R ++I +P P ++ Sbjct: 184 AADYGAPTMRKRFFMIA-RCDGKPIVWPEPTHAPADSEEV 222 >gi|114570713|ref|YP_757393.1| DNA (cytosine-5-)-methyltransferase [Maricaulis maris MCS10] gi|114341175|gb|ABI66455.1| DNA (cytosine-5-)-methyltransferase [Maricaulis maris MCS10] Length = 375 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 12/20 (60%) Query: 1 MKACDFGVPQRRERLYIIDF 20 + A DFG RER+ I+ F Sbjct: 148 LNAADFGAATSRERVLIVGF 167 >gi|6523846|gb|AAF14882.1|AF138283_1 cytosine-5 methyltransferase [Arabidopsis thaliana] Length = 1517 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 29/93 (31%), Gaps = 5/93 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++A +GV Q R+R+ I V ++P P+ + G + + G Sbjct: 1254 LEAGTYGVSQPRKRVIIWAASPEEVLPEWPEPMHVFDNPGSKISLPRGLRYDAGCNTKFG 1313 Query: 61 HQKRKENNKIAGKG-----FGYGLFFENSATTN 88 R + G + TT Sbjct: 1314 APFRSITVRDTIGDLPPVENGESKINKEYGTTP 1346 >gi|157412795|ref|YP_001483661.1| site-specific DNA methylase [Prochlorococcus marinus str. MIT 9215] gi|157387370|gb|ABV50075.1| Site-specific DNA methylase [Prochlorococcus marinus str. MIT 9215] Length = 698 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 1 MKACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLGIKPRLGDILEEHIDD 49 + A +GVPQ R RL+I N K+P P L+E I D Sbjct: 212 IYAWQYGVPQLRPRLFISGTKINECAPMKWPKPKYDSVEEAVTLDEAISD 261 >gi|167751359|ref|ZP_02423486.1| hypothetical protein EUBSIR_02345 [Eubacterium siraeum DSM 15702] gi|167655605|gb|EDR99734.1| hypothetical protein EUBSIR_02345 [Eubacterium siraeum DSM 15702] Length = 349 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 20/43 (46%) Query: 5 DFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHI 47 D+G+PQ R R ++ L + PT + + D +++ Sbjct: 154 DYGIPQTRRRFVLVGSLLGDIHIIPPTHNSLNIHVRDFIDDLP 196 >gi|168698288|ref|ZP_02730565.1| cytosine-specific methyltransferase [Gemmata obscuriglobus UQM 2246] Length = 293 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 14/21 (66%) Query: 1 MKACDFGVPQRRERLYIIDFL 21 ++A FGVPQ R RL+I+ Sbjct: 51 LEASAFGVPQVRRRLFIVGNR 71 >gi|89901847|ref|YP_524318.1| DNA-cytosine methyltransferase [Rhodoferax ferrireducens T118] gi|89346584|gb|ABD70787.1| DNA-cytosine methyltransferase [Rhodoferax ferrireducens T118] Length = 517 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 6/23 (26%), Positives = 14/23 (60%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 ++A ++G+PQ R R+ + + Sbjct: 231 IQAENYGIPQNRHRVILFGIRSD 253 >gi|294629552|ref|ZP_06708112.1| DNA methylase [Streptomyces sp. e14] gi|292832885|gb|EFF91234.1| DNA methylase [Streptomyces sp. e14] Length = 436 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 12/34 (35%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 + FGVPQ R R +I E P Sbjct: 196 LDTETFGVPQTRSRAVLIARREGLGEPSLPEATH 229 >gi|207094141|ref|ZP_03241928.1| hypothetical protein HpylHP_15485 [Helicobacter pylori HPKX_438_AG0C1] Length = 35 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKF 29 F VPQ RER +I+ S +F Sbjct: 11 FCVPQNRERAFIVGASRFSFDFNL 34 >gi|306817606|ref|ZP_07451349.1| modification methylase Eco47II [Mobiluncus mulieris ATCC 35239] gi|307699879|ref|ZP_07636930.1| DNA binding domain protein, excisionase family [Mobiluncus mulieris FB024-16] gi|304649648|gb|EFM46930.1| modification methylase Eco47II [Mobiluncus mulieris ATCC 35239] gi|307614917|gb|EFN94135.1| DNA binding domain protein, excisionase family [Mobiluncus mulieris FB024-16] Length = 424 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 31/100 (31%), Gaps = 14/100 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 M+A VPQ+RERL + + + FP L D + + Sbjct: 226 MRAQYHDVPQKRERLMLAGVRSDIGDELFFPRERNYIVSLWDAIGDRPQSPGQTYP---- 281 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGS 99 +RK GY + AR Y GS Sbjct: 282 ---QRKREVLSLVPPGGYWRDLPDDI------AREYLGGS 312 >gi|269976186|ref|ZP_06183182.1| modification methylase Eco47II [Mobiluncus mulieris 28-1] gi|269935515|gb|EEZ92053.1| modification methylase Eco47II [Mobiluncus mulieris 28-1] Length = 424 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 31/100 (31%), Gaps = 14/100 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 M+A VPQ+RERL + + + FP L D + + Sbjct: 226 MRAQYHDVPQKRERLMLAGVRSDIGDELFFPRERNYIVSLWDAIGDRPQSPGQTYP---- 281 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGS 99 +RK GY + AR Y GS Sbjct: 282 ---QRKREVLSLVPPGGYWRDLPDDI------AREYLGGS 312 >gi|261414310|gb|ACX83573.1| DNA chromomethylase [Hieracium piloselloides] Length = 607 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 16/38 (42%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG 40 A +G+PQ R R+++ ++P P G Sbjct: 301 AGSYGLPQFRRRMFMWGARPSEKLPQYPLPTHNVVTRG 338 >gi|288919495|ref|ZP_06413826.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f] gi|288349098|gb|EFC83344.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f] Length = 642 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID 48 + VPQ R+RL I + F++P G + + + + + + Sbjct: 194 YSVPQSRQRLIIAAMRT-PMRFRWPDDTGSRVTVWNAIGDLPE 235 >gi|18313899|ref|NP_560566.1| C-5 cytosine-specific DNA methylase [Pyrobaculum aerophilum str. IM2] gi|18161467|gb|AAL64748.1| C-5 cytosine-specific DNA methylase [Pyrobaculum aerophilum str. IM2] Length = 463 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 12/19 (63%) Query: 7 GVPQRRERLYIIDFLNPSV 25 GVPQ+RERL II + Sbjct: 191 GVPQKRERLIIIGIRRDLI 209 >gi|317499855|ref|ZP_07958093.1| site-specific DNA methylase [Lachnospiraceae bacterium 8_1_57FAA] gi|316898757|gb|EFV20790.1| site-specific DNA methylase [Lachnospiraceae bacterium 8_1_57FAA] Length = 419 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGD 41 + A D+G P R+R Y I F E +P P K R Sbjct: 158 LVAADYGAPTTRKRWYAI-FRRDGREIVWPAPTHFKDREPH 197 >gi|242212987|ref|XP_002472324.1| predicted protein [Postia placenta Mad-698-R] gi|220728601|gb|EED82492.1| predicted protein [Postia placenta Mad-698-R] Length = 1147 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 13/37 (35%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 A +G Q R R+ KFP P+ + Sbjct: 828 DAGHYGAAQSRRRVIFWGAKQGVPLPKFPKPMHDLTK 864 >gi|225019628|ref|ZP_03708820.1| hypothetical protein CLOSTMETH_03581 [Clostridium methylpentosum DSM 5476] gi|224947595|gb|EEG28804.1| hypothetical protein CLOSTMETH_03581 [Clostridium methylpentosum DSM 5476] Length = 390 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 19/49 (38%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDD 49 + A GVPQ+R+R + I L F + L E+ D Sbjct: 142 LDASHCGVPQKRKRFFCIGSLGQKDGFLLEYFNNQVSKHETTLREYFGD 190 >gi|313665643|ref|YP_004047514.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma leachii PG50] gi|312949997|gb|ADR24593.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma leachii PG50] Length = 327 Score = 38.4 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 32/102 (31%), Gaps = 14/102 (13%) Query: 2 KACDFGVPQRRERLYIIDFLN-------PSVEFKFPTPLGIKPRLGDILEEHIDDKST-- 52 + FGVPQ+RER+ I + + F P+ + LEE D+ Sbjct: 157 DSSKFGVPQKRERVIFIGCKDRQKVDEVINKLRSFNAPIVTVKQAIGHLEEIKDENIIAN 216 Query: 53 -----ISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNT 89 S + + KE ++ + T Sbjct: 217 HIFSKHSEDMKKRLSNLKEGQSLSKNFSDAFKRISYDKPSPT 258 >gi|254804174|ref|YP_003082395.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] gi|304388624|ref|ZP_07370688.1| possible DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] gi|254667716|emb|CBA03597.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] gi|304337441|gb|EFM03611.1| possible DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] Length = 351 Score = 38.4 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 19/42 (45%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 D+G+PQ R+R +I + + G + + D+L Sbjct: 157 NTADYGIPQSRKRFTLIANRITKEKLEPVKYSGKRLTVRDVL 198 >gi|66768381|ref|YP_243143.1| DNA methyltransferase [Xanthomonas campestris pv. campestris str. 8004] gi|66573713|gb|AAY49123.1| DNA methyltransferase [Xanthomonas campestris pv. campestris str. 8004] Length = 512 Score = 38.4 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 15/26 (57%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A FGV QRR+R++++ + Sbjct: 182 LDAQYFGVAQRRKRVFLVASGGDGFD 207 >gi|78047842|ref|YP_364017.1| cytosine-specific DNA methyltransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036272|emb|CAJ23963.1| cytosine-specific DNA methyltransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 512 Score = 38.4 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 15/26 (57%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A FGV QRR+R++++ + Sbjct: 182 LDAQYFGVAQRRKRVFLVASGGDGFD 207 >gi|294673411|ref|YP_003574027.1| C-5 cytosine-specific family DNA methylase [Prevotella ruminicola 23] gi|294473101|gb|ADE82490.1| DNA methylase, C-5 cytosine-specific family [Prevotella ruminicola 23] Length = 448 Score = 38.4 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 30/90 (33%), Gaps = 12/90 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A G PQRR+R +I L F + +ILE DK + Sbjct: 142 LNASRCGAPQRRKRFIMIGHLGEEDGF-----------MSNILELRQSDKEMTVADYFGS 190 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTL 90 + + G+F N + T+ Sbjct: 191 QLDIQYYYRHPRSYARRGIFSVN-EPSPTI 219 >gi|86131659|ref|ZP_01050257.1| DNA (cytosine-5-)-methyltransferase [Dokdonia donghaensis MED134] gi|85818104|gb|EAQ39272.1| DNA (cytosine-5-)-methyltransferase [Dokdonia donghaensis MED134] Length = 409 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 3/64 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK--PRLGDILEEHIDDKSTISNKLWE 59 K+ FGV Q+R R+ +I + S FK+P + + IL + K + + Sbjct: 196 KSEHFGVLQKRRRIILIGWQKGSG-FKYPEFEELDEKFTIRQILSDLKKLKPGDQKNVTK 254 Query: 60 GHQK 63 + Sbjct: 255 YAKP 258 >gi|257882475|ref|ZP_05662128.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium 1,231,502] gi|294620467|ref|ZP_06699776.1| methyl transferase [Enterococcus faecium E1679] gi|294623872|ref|ZP_06702700.1| methyl transferase [Enterococcus faecium U0317] gi|257818133|gb|EEV45461.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium 1,231,502] gi|291593380|gb|EFF24945.1| methyl transferase [Enterococcus faecium E1679] gi|291596826|gb|EFF28049.1| methyl transferase [Enterococcus faecium U0317] Length = 380 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 28/92 (30%), Gaps = 23/92 (25%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + + VPQ RER+++I + + FP +I Sbjct: 147 LNSKAY-VPQSRERIFLIGHSRDACTEQVFPIIGSSSTSDQNI----------------- 188 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 R N G + + + TL+ Sbjct: 189 ----RNLVNINPSNRGMGGQVYGSDSVAPTLT 216 >gi|323942310|gb|EGB38481.1| modification methylase HgiDII(cytosine-specificmethyltransferase HgiDII) [Escherichia coli E482] Length = 210 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 A +GVPQ RERL +I + V P+P Sbjct: 21 AAWYGVPQTRERLVLIASKDFYV--ALPSPTH 50 >gi|297625484|ref|YP_003687247.1| DNA (cytosine-5-)-methyltransferase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921249|emb|CBL55799.1| DNA (cytosine-5-)-methyltransferase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 552 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 10/23 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + A D GV Q R R +I Sbjct: 213 LNAADAGVAQTRHRFILIGVRQD 235 >gi|283796860|ref|ZP_06346013.1| DNA (cytosine-5-)-methyltransferase [Clostridium sp. M62/1] gi|291075266|gb|EFE12630.1| DNA (cytosine-5-)-methyltransferase [Clostridium sp. M62/1] Length = 547 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 15/19 (78%) Query: 1 MKACDFGVPQRRERLYIID 19 + A +GVPQRR+R+Y++ Sbjct: 184 LDAQYWGVPQRRKRIYLVA 202 >gi|325972432|ref|YP_004248623.1| DNA-cytosine methyltransferase [Spirochaeta sp. Buddy] gi|324027670|gb|ADY14429.1| DNA-cytosine methyltransferase [Spirochaeta sp. Buddy] Length = 402 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 12/25 (48%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV 25 + A D+G PQRR R +I Sbjct: 157 INAADYGFPQRRRRTFIFATKPNKK 181 >gi|291513670|emb|CBK62880.1| Site-specific DNA methylase [Alistipes shahii WAL 8301] Length = 541 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKS 51 + A D+G R+R + I F P + +P P K GD+ K Sbjct: 178 LNAADYGAYTSRKRFFGI-FAKPYLPIVWPKPTHSKTGGGDLFGSLAKWKP 227 >gi|218196311|gb|EEC78738.1| hypothetical protein OsI_18945 [Oryza sativa Indica Group] Length = 1325 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 15/29 (51%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 +G+PQ R R++++ + FP P Sbjct: 1027 YGLPQFRMRVFLLGCHSKEKLPPFPLPTH 1055 >gi|121635670|ref|YP_975915.1| modification methylase (cytosine-specific DNA methylase) [Neisseria meningitidis FAM18] gi|218767413|ref|YP_002341925.1| modification methylase (cytosine-specific DNA methylase) [Neisseria meningitidis Z2491] gi|120867376|emb|CAM11148.1| modification methylase (cytosine-specific DNA methylase) [Neisseria meningitidis FAM18] gi|121051421|emb|CAM07714.1| modification methylase (cytosine-specific DNA methylase) [Neisseria meningitidis Z2491] gi|261393340|emb|CAX50974.1| putative cytosine-specific methyltransferase [Neisseria meningitidis 8013] gi|319409676|emb|CBY89977.1| putative cytosine-specific methyltransferase [Neisseria meningitidis WUE 2594] gi|325131421|gb|EGC54130.1| modification methylase [Neisseria meningitidis M6190] Length = 351 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 19/42 (45%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 D+G+PQ R+R +I + + G + + D+L Sbjct: 157 NTADYGIPQSRKRFTLIANRITKEKLEPVKYSGKRLTVRDVL 198 >gi|46201743|ref|ZP_00054441.2| COG0270: Site-specific DNA methylase [Magnetospirillum magnetotacticum MS-1] Length = 271 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 20/43 (46%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 ++A DFGVPQ R RL+++ P L DIL Sbjct: 93 LEATDFGVPQSRRRLFLLCDREAKPLPLTPCGLPSGTVGQDIL 135 >gi|330958885|gb|EGH59145.1| cytosine-specific DNA methyltransferase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 458 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 24/93 (25%), Gaps = 6/93 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A FG+ QRR R++++ + + L + Sbjct: 183 LDAQYFGLAQRRRRVFLVASARADFD------PTAVLFERESLRRDNPPSRESRQDVTGT 236 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 R G F + TL A Sbjct: 237 LSSRATGGGGLGTDFDLAGGLQAVDVCPTLRAG 269 >gi|315656923|ref|ZP_07909810.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492878|gb|EFU82482.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 503 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 14/19 (73%) Query: 1 MKACDFGVPQRRERLYIID 19 + A FGVPQRR R++++ Sbjct: 176 LDAQFFGVPQRRRRIFLVA 194 >gi|304389869|ref|ZP_07371828.1| possible DNA-cytosine methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304327045|gb|EFL94284.1| possible DNA-cytosine methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 503 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 14/19 (73%) Query: 1 MKACDFGVPQRRERLYIID 19 + A FGVPQRR R++++ Sbjct: 176 LDAQFFGVPQRRRRIFLVA 194 >gi|233770212|gb|ACQ91179.1| Met1-type cytosine DNA-methyltransferase [Fragaria x ananassa] Length = 1557 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 18/34 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +GV Q R+R +I + ++P P+ Sbjct: 1294 LEAGAYGVSQSRKRAFIWAAAPDEILPEWPEPMH 1327 >gi|233770210|gb|ACQ91178.1| Met1-type cytosine DNA-methyltransferase [Fragaria x ananassa] Length = 1565 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 18/34 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +GV Q R+R +I + ++P P+ Sbjct: 1302 LEAGAYGVSQSRKRAFIWAAAPDEILPEWPEPMH 1335 >gi|227876656|ref|ZP_03994765.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris ATCC 35243] gi|227842553|gb|EEJ52753.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris ATCC 35243] Length = 424 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 31/100 (31%), Gaps = 14/100 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 M+A VPQ+RERL + + + FP L D + + Sbjct: 226 MRAQYHDVPQKRERLMLAGVRSDVGDELFFPRERNYIVSLWDAIGDRPQSPGQTYP---- 281 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGS 99 +RK GY + AR Y GS Sbjct: 282 ---QRKREVLSLVPPGGYWRDLPDDI------AREYLGGS 312 >gi|170731368|ref|YP_001763315.1| C-5 cytosine-specific DNA methylase [Burkholderia cenocepacia MC0-3] gi|169814610|gb|ACA89193.1| C-5 cytosine-specific DNA methylase [Burkholderia cenocepacia MC0-3] Length = 333 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 13/19 (68%) Query: 1 MKACDFGVPQRRERLYIID 19 + A DFG Q R+R++++ Sbjct: 144 LNAADFGAAQARKRMFLVC 162 >gi|118431236|ref|NP_147563.2| DNA (cytosine-5-)-methyltransferase [Aeropyrum pernix K1] gi|116062559|dbj|BAA79854.2| DNA (cytosine-5-)-methyltransferase [Aeropyrum pernix K1] Length = 469 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 19/37 (51%) Query: 7 GVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 GVPQ+RERL II F T ++ R+ +L Sbjct: 196 GVPQKRERLVIIGLRKDLAGGGFETISRLRARIDHVL 232 >gi|213964195|ref|ZP_03392431.1| putative C-5 cytosine-specific DNA methylase [Capnocytophaga sputigena Capno] gi|213953162|gb|EEB64508.1| putative C-5 cytosine-specific DNA methylase [Capnocytophaga sputigena Capno] Length = 243 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 1/73 (1%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHIDDKSTISNKLWEG 60 ++GVPQ R+RL ++ +++ T + D + + K N+L Sbjct: 47 NCPEYGVPQHRKRLVLLASKFGNIKLIDKTHSKDNYVTVRDAIGQLPAIKDGEYNELDRL 106 Query: 61 HQKRKENNKIAGK 73 H RK + + Sbjct: 107 HYARKLSPLNKKR 119 >gi|229489314|ref|ZP_04383178.1| DNA methylase [Rhodococcus erythropolis SK121] gi|229323807|gb|EEN89564.1| DNA methylase [Rhodococcus erythropolis SK121] Length = 358 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG 40 ++ ++GVPQ R R +I + V F P+P R G Sbjct: 179 LRTEEYGVPQTRRRAILIANRH-HVPF-LPSPTHRAYRKG 216 >gi|123967970|ref|YP_001008828.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. AS9601] gi|123198080|gb|ABM69721.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. AS9601] Length = 698 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 6/70 (8%) Query: 1 MKACDFGVPQRRERLYIIDFL-NPSVEFKFPTPL----GIKPRLGDILEEHIDDKSTISN 55 + A +GVPQ R RL+I N K+P P L + + + K Sbjct: 212 IYAWQYGVPQLRPRLFISGTKINECAPMKWPKPKYDSLEEAVTLDEAISDLPPLKGGWDE 271 Query: 56 KLWEGHQKRK 65 K W+ + Sbjct: 272 K-WDEKYSYE 280 >gi|325564165|gb|ADZ31422.1| M.PsuNI [Pseudomonas stutzeri] Length = 422 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 3/30 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFP 30 + A +F VPQ R+R+ I + KFP Sbjct: 168 LSADEFSVPQTRQRVIFIGTRDED---KFP 194 >gi|261820947|ref|YP_003259053.1| DNA-cytosine methyltransferase [Pectobacterium wasabiae WPP163] gi|261604960|gb|ACX87446.1| DNA-cytosine methyltransferase [Pectobacterium wasabiae WPP163] Length = 487 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 16/26 (61%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A FGV QRR+R++++ ++ Sbjct: 183 LDAQYFGVAQRRKRVFLVASGRDDLD 208 >gi|167771959|ref|ZP_02444012.1| hypothetical protein ANACOL_03332 [Anaerotruncus colihominis DSM 17241] gi|167665757|gb|EDS09887.1| hypothetical protein ANACOL_03332 [Anaerotruncus colihominis DSM 17241] Length = 520 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 1/24 (4%) Query: 1 MKACDFGVPQRRERLYIID-FLNP 23 + A +GVPQRR R+Y++ F + Sbjct: 177 LDAQFWGVPQRRRRIYLVADFRDD 200 >gi|318057150|ref|ZP_07975873.1| putative 5-methylcytosine methyltransferase [Streptomyces sp. SA3_actG] gi|318076182|ref|ZP_07983514.1| putative 5-methylcytosine methyltransferase [Streptomyces sp. SA3_actF] Length = 324 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 2/63 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIK-PRLGDILEEHIDDKSTISNKLW 58 + A DFGV QRRE +++ F +P PL P LG+ L + + W Sbjct: 149 LDARDFGVSQRREHGFLLAMSGERMKRFSWPVPLATPCPTLGETLRASMGARGWPGADDW 208 Query: 59 EGH 61 H Sbjct: 209 ADH 211 >gi|269123998|ref|YP_003306575.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM 12112] gi|268315324|gb|ACZ01698.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM 12112] Length = 438 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 20/60 (33%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + + +FG+ Q R+R+YI+ + + + R + L Sbjct: 164 LDSIEFGLAQSRKRIYIVGTKDKLISLENFDKKYSSFRDIQEKNCETLNTDFTRKLLLNY 223 >gi|325137454|gb|EGC60041.1| cytosine-specific methyltransferase HgiDII [Neisseria meningitidis ES14902] Length = 334 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 19/42 (45%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 D+G+PQ R+R +I + + G + + D+L Sbjct: 140 NTADYGIPQSRKRFTLIANRITKEKLEPVKYSGKRLTVRDVL 181 >gi|113478056|ref|YP_724117.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] gi|110169104|gb|ABG53644.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] Length = 345 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 15/29 (51%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFP 30 D+G+PQ R+RL + +++ P Sbjct: 149 NCQDYGIPQNRKRLVLFASKFGNIDLIPP 177 >gi|222630668|gb|EEE62800.1| hypothetical protein OsJ_17603 [Oryza sativa Japonica Group] Length = 1190 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 15/29 (51%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 +G+PQ R R++++ + FP P Sbjct: 892 YGLPQFRMRVFLLGCHSKEKLPPFPLPTH 920 >gi|297604073|ref|NP_001054957.2| Os05g0224800 [Oryza sativa Japonica Group] gi|57863807|gb|AAW56861.1| unknow protein [Oryza sativa Japonica Group] gi|255676144|dbj|BAF16871.2| Os05g0224800 [Oryza sativa Japonica Group] Length = 304 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 15/29 (51%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 +G+PQ R R++++ + FP P Sbjct: 6 YGLPQFRMRVFLLGCHSKEKLPPFPLPTH 34 >gi|325141454|gb|EGC63930.1| cytosine-specific methyltransferase HgiDII [Neisseria meningitidis 961-5945] gi|325199103|gb|ADY94559.1| cytosine-specific methyltransferase HgiDII [Neisseria meningitidis G2136] Length = 330 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 19/42 (45%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 D+G+PQ R+R +I + + G + + D+L Sbjct: 136 NTADYGIPQSRKRFTLIANRITKEKLEPVKYSGKRLTVRDVL 177 >gi|312133558|ref|YP_004000897.1| dcm2 [Bifidobacterium longum subsp. longum BBMN68] gi|311772809|gb|ADQ02297.1| Dcm2 [Bifidobacterium longum subsp. longum BBMN68] Length = 429 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 9/18 (50%), Positives = 13/18 (72%) Query: 2 KACDFGVPQRRERLYIID 19 A ++G+PQRR R+YI Sbjct: 180 NAAEYGMPQRRRRVYIYA 197 >gi|292670760|ref|ZP_06604186.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541] gi|292647381|gb|EFF65353.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541] Length = 476 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 14/19 (73%) Query: 1 MKACDFGVPQRRERLYIID 19 + A +GVPQRR R++++ Sbjct: 168 LDAQYWGVPQRRRRIFLVA 186 >gi|116492328|ref|YP_804063.1| site-specific DNA methylase [Pediococcus pentosaceus ATCC 25745] gi|116102478|gb|ABJ67621.1| Site-specific DNA methylase [Pediococcus pentosaceus ATCC 25745] Length = 428 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 4/88 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A ++G QRR R+Y + N + F + DI +D+ +G Sbjct: 163 INAAEYGFGQRRRRVYFFVYRNDTP---FAKKMDELF-ETDIESVLVDETKYDEYIFSKG 218 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTN 88 R+ K + + + N Sbjct: 219 LFARQFPIKQEVYKKRHDYYELSDDIVN 246 >gi|294667855|ref|ZP_06733064.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602358|gb|EFF45800.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 410 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKP 37 + A +GVPQ R R I+ FP PL P Sbjct: 161 LYAPHYGVPQTRWRTIILGSRCGVDPTALFPEPLRQAP 198 >gi|315654951|ref|ZP_07907856.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii ATCC 51333] gi|315490912|gb|EFU80532.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii ATCC 51333] Length = 508 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 11/19 (57%), Positives = 15/19 (78%) Query: 1 MKACDFGVPQRRERLYIID 19 + A FGVPQRR+R+Y+I Sbjct: 177 LDAQFFGVPQRRKRIYLIC 195 >gi|298346372|ref|YP_003719059.1| DNA-cytosine methyltransferase [Mobiluncus curtisii ATCC 43063] gi|298236433|gb|ADI67565.1| DNA-cytosine methyltransferase [Mobiluncus curtisii ATCC 43063] Length = 508 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 11/19 (57%), Positives = 15/19 (78%) Query: 1 MKACDFGVPQRRERLYIID 19 + A FGVPQRR+R+Y+I Sbjct: 177 LDAQFFGVPQRRKRIYLIC 195 >gi|212637209|ref|YP_002313734.1| C-5 cytosine-specific DNA methylase [Shewanella piezotolerans WP3] gi|212558693|gb|ACJ31147.1| C-5 cytosine-specific DNA methylase [Shewanella piezotolerans WP3] Length = 510 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 12/94 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT---PLGIKPRLGDILEEHID-----DKST 52 +++ ++GVPQ R R+ ++ P P+ + +L + K Sbjct: 243 IRSENYGVPQARHRVILLGVRQDIA--HVPDTIHPMKQAVTVEQVLSDLPPLRSGLSKQK 300 Query: 53 ISNKLWEG--HQKRKENNKIAGKGFGYGLFFENS 84 K WE K+ +I F G + + Sbjct: 301 DIQKDWENQVQINAKKLERILKTRFESGAVDKLN 334 >gi|313158881|gb|EFR58260.1| C-5 cytosine-specific DNA methylase [Alistipes sp. HGB5] Length = 582 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 18/59 (30%), Gaps = 1/59 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A DFG R R + I FP P K L K ++ + Sbjct: 181 LNAADFGAYTSRRRFFGIFARRGLP-IVFPEPTHTKNPAQSDLFGQQLRKWRPVREVLD 238 >gi|228917967|ref|NP_142059.2| modification methylase [Pyrococcus horikoshii OT3] Length = 312 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 6/47 (12%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID 48 A D+GVPQ R R++I ++E K P + + R+ D L + Sbjct: 156 NALDYGVPQVRRRVFI-----SNIELK-PRKIRSRKRVWDALRDIPP 196 >gi|189460101|ref|ZP_03008886.1| hypothetical protein BACCOP_00737 [Bacteroides coprocola DSM 17136] gi|255693802|ref|ZP_05417477.1| modification methylase HgiDII [Bacteroides finegoldii DSM 17565] gi|189433184|gb|EDV02169.1| hypothetical protein BACCOP_00737 [Bacteroides coprocola DSM 17136] gi|260620371|gb|EEX43242.1| modification methylase HgiDII [Bacteroides finegoldii DSM 17565] Length = 355 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 16/40 (40%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 +GVPQ R R +I +V P + L D L Sbjct: 160 SYYGVPQSRRRFSLIATRLENVNIHLPKADDKETVLADYL 199 >gi|86141746|ref|ZP_01060270.1| DNA-cytosine methyltransferase [Leeuwenhoekiella blandensis MED217] gi|85831309|gb|EAQ49765.1| DNA-cytosine methyltransferase [Leeuwenhoekiella blandensis MED217] Length = 410 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 29/85 (34%), Gaps = 14/85 (16%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 K+ FGV Q+R R+ +I + F++P+ + + +++ Sbjct: 196 KSEHFGVLQKRRRIILIGWQKG-FSFQYPSFTKV-------------KEKYTLDQILSDL 241 Query: 62 QKRKENNKIAGKGFGYGLFFENSAT 86 +K K + + + Sbjct: 242 KKLKPGEQNNVTKYTGQITPYLEKY 266 >gi|241763153|ref|ZP_04761213.1| C-5 cytosine-specific DNA methylase [Acidovorax delafieldii 2AN] gi|241367778|gb|EER62032.1| C-5 cytosine-specific DNA methylase [Acidovorax delafieldii 2AN] Length = 536 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 16/26 (61%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A FGV QRR+R++++ ++ Sbjct: 190 LDAQYFGVAQRRKRVFLVASGGDDLD 215 >gi|15838375|ref|NP_299063.1| DNA methyltransferase [Xylella fastidiosa 9a5c] gi|9106848|gb|AAF84583.1|AE003999_11 DNA methyltransferase [Xylella fastidiosa 9a5c] Length = 537 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 16/26 (61%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A FGV QRR+R++++ ++ Sbjct: 189 LDAQYFGVAQRRKRVFLVASGGDDLD 214 >gi|329113622|ref|ZP_08242401.1| Modification methylase HpaII [Acetobacter pomorum DM001] gi|326697068|gb|EGE48730.1| Modification methylase HpaII [Acetobacter pomorum DM001] Length = 389 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 4/61 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHID--DKSTISNKL 57 + A F VPQ R RL++I + +P + P + L+ + K + L Sbjct: 157 INASLF-VPQSRPRLFMIGVHKDVEIHPSLLSPEPLDPFHTNGLKRAVQGISKKAQTQFL 215 Query: 58 W 58 W Sbjct: 216 W 216 >gi|322701389|gb|EFY93139.1| cytosine C5-DNA methyltransferase, putative [Metarhizium acridum CQMa 102] Length = 657 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 8/97 (8%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQKRK 65 +G+ Q R+RL II FP + D L + + +S ++ EG Sbjct: 448 WGLAQTRKRLIIIAAGPGEQLPSFPPATHSEKS-KDGLRPYTTIRQVLS-RIREGDDLH- 504 Query: 66 ENNKIAGKGFGYGLFFENSATTNTLSAR----YYKDG 98 N + T++AR YY DG Sbjct: 505 -NLGTVAQFTPRRRASGFDTLLGTIAARWGSLYYPDG 540 >gi|240146838|ref|ZP_04745439.1| putative cytosine-specific methyltransferase protein [Roseburia intestinalis L1-82] gi|257201024|gb|EEU99308.1| putative cytosine-specific methyltransferase protein [Roseburia intestinalis L1-82] gi|291534422|emb|CBL07534.1| DNA-methyltransferase (dcm) [Roseburia intestinalis M50/1] gi|291541262|emb|CBL14373.1| DNA-methyltransferase (dcm) [Roseburia intestinalis XB6B4] Length = 411 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 15/29 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF 29 + +FGVPQ R+R ++ L E F Sbjct: 169 IDISEFGVPQTRKRYIMVGVLQGKTEMFF 197 >gi|91213886|ref|YP_543872.1| hypothetical protein UTI89_C4938 [Escherichia coli UTI89] gi|110644679|ref|YP_672409.1| modification methylase [Escherichia coli 536] gi|191170832|ref|ZP_03032384.1| modification methylase HgiDII [Escherichia coli F11] gi|300974517|ref|ZP_07172633.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1] gi|91075460|gb|ABE10341.1| hypothetical protein UTI89_C4938 [Escherichia coli UTI89] gi|110346271|gb|ABG72508.1| modification methylase [Escherichia coli 536] gi|190909056|gb|EDV68643.1| modification methylase HgiDII [Escherichia coli F11] gi|300308872|gb|EFJ63392.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1] gi|307629406|gb|ADN73710.1| DNA-cytosine methyltransferase [Escherichia coli UM146] gi|315290903|gb|EFU50272.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 153-1] gi|324010993|gb|EGB80212.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 60-1] Length = 348 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG 40 A ++G+PQRR+RL ++ V P K ++ Sbjct: 154 NAENYGIPQRRKRLVLLASRVGKV--TLPEITHGKNKIP 190 >gi|320094594|ref|ZP_08026360.1| DNA (cytosine-5-)-methyltransferase [Actinomyces sp. oral taxon 178 str. F0338] gi|319978509|gb|EFW10086.1| DNA (cytosine-5-)-methyltransferase [Actinomyces sp. oral taxon 178 str. F0338] Length = 365 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 4/50 (8%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP---RLGDILEEHIDD 49 A D+GV QRR R+ + F + V F P + + ++E D Sbjct: 193 ALDYGVAQRRYRVIVSGFRDREVSRAF-KPKKAETGNLTVRSVIEGLPDP 241 >gi|159030022|emb|CAO90403.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 412 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 7/67 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A VPQ+RERL II +++ FP L L ++ S+ E Sbjct: 212 LSAQFLDVPQKRERLIIIATRQDLNIKPIFPQYKNYTISLKKAL------ENCPSSPGVE 265 Query: 60 GHQKRKE 66 +++KE Sbjct: 266 YKERKKE 272 >gi|325997344|gb|ADZ49552.1| Type II DNA modification enzyme [Helicobacter pylori 2017] Length = 159 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 9/15 (60%), Positives = 12/15 (80%) Query: 1 MKACDFGVPQRRERL 15 + A D+GVPQ RER+ Sbjct: 145 LNALDYGVPQVRERV 159 >gi|153815831|ref|ZP_01968499.1| hypothetical protein RUMTOR_02076 [Ruminococcus torques ATCC 27756] gi|145846856|gb|EDK23774.1| hypothetical protein RUMTOR_02076 [Ruminococcus torques ATCC 27756] Length = 345 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGD 41 + A D+G P R+R Y I F E +P P K R Sbjct: 47 LVAADYGAPTTRKRWYAI-FRRDGREIVWPAPTHFKDREPH 86 >gi|89890924|ref|ZP_01202433.1| DNA (cytosine-5-)-methyltransferase, dcm [Flavobacteria bacterium BBFL7] gi|89517069|gb|EAS19727.1| DNA (cytosine-5-)-methyltransferase, dcm [Flavobacteria bacterium BBFL7] Length = 356 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 15/97 (15%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 ++GVPQ R+R +I + E + P K + D++ E G Sbjct: 161 NTSEYGVPQNRKRFTLIANRITNDELE-PIKANKKINVRDVIGEE------------NGF 207 Query: 62 QKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDG 98 K K +K F + + + T L R KDG Sbjct: 208 AKIKAGHKDETD-FNHSVPNISELTLRRL-KRVEKDG 242 >gi|238603199|ref|XP_002395883.1| hypothetical protein MPER_03983 [Moniliophthora perniciosa FA553] gi|215467388|gb|EEB96813.1| hypothetical protein MPER_03983 [Moniliophthora perniciosa FA553] Length = 248 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 15/34 (44%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +G PQ R R ++ S + P P Sbjct: 42 LQAGHYGTPQNRIRFILVAAKMGSPLPEIPAPTH 75 >gi|152984997|ref|YP_001347885.1| modification methylase DdeI [Pseudomonas aeruginosa PA7] gi|150960155|gb|ABR82180.1| modification methylase DdeI [Pseudomonas aeruginosa PA7] Length = 518 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 12/25 (48%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE 26 + FGVPQ+R RL +I Sbjct: 257 DSSLFGVPQKRPRLIVIGLRQDLAN 281 >gi|300702384|ref|YP_003743984.1| cytosine-specific methyltransferase [Ralstonia solanacearum CFBP2957] gi|299070045|emb|CBJ41330.1| putative cytosine-specific methyltransferase [Ralstonia solanacearum CFBP2957] Length = 438 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 26/87 (29%), Gaps = 7/87 (8%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFP-------TPLGIKPRLGDILEEHIDDKSTIS 54 DFGVPQ R R ++ L E P D+ + Sbjct: 181 NCSDFGVPQNRLRYLVLCELRGKSEGPMPDLFQELLKGRKAFLTSKDLPVKRKTTVKEAI 240 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFF 81 L + R EN KGF ++ Sbjct: 241 ADLLVAGKPRVENEDSEVKGFKEAVYD 267 >gi|239918514|ref|YP_002958072.1| DNA-methyltransferase Dcm [Micrococcus luteus NCTC 2665] gi|281415284|ref|ZP_06247026.1| DNA-methyltransferase Dcm [Micrococcus luteus NCTC 2665] gi|239839721|gb|ACS31518.1| DNA-methyltransferase Dcm [Micrococcus luteus NCTC 2665] Length = 315 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 12/20 (60%) Query: 1 MKACDFGVPQRRERLYIIDF 20 + + FGVPQ R R++I Sbjct: 157 LDSRHFGVPQSRTRVFICGV 176 >gi|254671709|emb|CBA09495.1| modification methylase [Neisseria meningitidis alpha153] Length = 351 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 19/42 (45%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 D+G+PQ R+R +I + + G + + D+L Sbjct: 157 NTADYGIPQSRKRFTLIANRITKEKLEPAKYSGKRLTVRDVL 198 >gi|224077654|ref|XP_002305346.1| DNA methyltransferase [Populus trichocarpa] gi|222848310|gb|EEE85857.1| DNA methyltransferase [Populus trichocarpa] Length = 1529 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTIS 54 ++A +GV Q R+R +I + ++P P+ + L+ + +KS S Sbjct: 1270 LEAGAYGVSQSRKRAFIWAASPEEILPEWPEPMHVF--AAPELKITLSEKSQYS 1321 >gi|153855943|ref|ZP_01996894.1| hypothetical protein DORLON_02919 [Dorea longicatena DSM 13814] gi|149751791|gb|EDM61722.1| hypothetical protein DORLON_02919 [Dorea longicatena DSM 13814] Length = 433 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 35/109 (32%), Gaps = 15/109 (13%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 A ++G QRR R +I + + K+ + + KS +K Sbjct: 165 NAAEYGAAQRRRRTFIFAYNKDT---KYAETMDNYEADNILSMNGFMAKSFPISKCGPLV 221 Query: 62 QKRKENNKIAGKGFGYGLFFENSATTNTL------------SARYYKDG 98 + + ++ + L + N L +A Y KDG Sbjct: 222 ETTVLCSDVSNVDRVHLLEDGTEESDNDLLEMTKKFQFCFQTAGYMKDG 270 >gi|292486555|ref|YP_003529421.1| modification methylase [Erwinia amylovora CFBP1430] gi|291551968|emb|CBA19005.1| modification methylase [Erwinia amylovora CFBP1430] Length = 379 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 2/50 (4%) Query: 2 KACDFGVPQRRERLYIIDFLN-PSVEFKFPT-PLGIKPRLGDILEEHIDD 49 FGVPQ R R+ +I + + + FP + L L D+ Sbjct: 160 NFSHFGVPQNRIRVILIAIKDLEYLPYIFPEVEMNKDLTLAKTLAGITDE 209 >gi|218134306|ref|ZP_03463110.1| hypothetical protein BACPEC_02199 [Bacteroides pectinophilus ATCC 43243] gi|217991681|gb|EEC57687.1| hypothetical protein BACPEC_02199 [Bacteroides pectinophilus ATCC 43243] Length = 622 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 15/25 (60%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV 25 + A DFGVPQ R+R I N S+ Sbjct: 420 LTASDFGVPQARQRAIFICSKNKSI 444 >gi|134296233|ref|YP_001119968.1| DNA-cytosine methyltransferase [Burkholderia vietnamiensis G4] gi|134139390|gb|ABO55133.1| DNA-cytosine methyltransferase [Burkholderia vietnamiensis G4] Length = 461 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 21/64 (32%), Gaps = 4/64 (6%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 A DFG Q+R R+ + P L P E + D+ + W H Sbjct: 250 NAADFGAAQQRRRVVVAGIRREPGA---PERLLAAPTPTHSREALLWDQWIAGD-YWRRH 305 Query: 62 QKRK 65 R Sbjct: 306 AIRA 309 >gi|317401191|gb|EFV81837.1| DNA-cytosine methyltransferase [Achromobacter xylosoxidans C54] Length = 523 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 4/85 (4%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQ 62 A D+G+PQ R R+ + + E ++ R L +K ++ L + Sbjct: 235 ADDYGIPQSRHRVILFGIRSDVAE----ATSALRERPESFLLRKAPEKIGVNAALAGLPK 290 Query: 63 KRKENNKIAGKGFGYGLFFENSATT 87 R ++ + S Sbjct: 291 LRSRLSQEPDSDQAWITAVRRSPQA 315 >gi|281420198|ref|ZP_06251197.1| modification methylase HphIA [Prevotella copri DSM 18205] gi|281405693|gb|EFB36373.1| modification methylase HphIA [Prevotella copri DSM 18205] Length = 379 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 17/50 (34%), Gaps = 5/50 (10%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTP---LGIKPRLGDILEEHID 48 A FGVPQ R R I+ F P + + D + + Sbjct: 188 NAAGFGVPQARIRAIIVASK--YKNFVLPDEMLSVEEYKTVRDAIADLPH 235 >gi|153814224|ref|ZP_01966892.1| hypothetical protein RUMTOR_00433 [Ruminococcus torques ATCC 27756] gi|145848620|gb|EDK25538.1| hypothetical protein RUMTOR_00433 [Ruminococcus torques ATCC 27756] Length = 702 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 15/25 (60%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV 25 + A DFGVPQ R+R I N S+ Sbjct: 500 LTASDFGVPQARQRAIFICSKNKSI 524 >gi|329937998|ref|ZP_08287480.1| putative 5-methylcytosine methyltransferase [Streptomyces griseoaurantiacus M045] gi|329302955|gb|EGG46844.1| putative 5-methylcytosine methyltransferase [Streptomyces griseoaurantiacus M045] Length = 426 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 11/34 (32%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 + +GVPQ R R +I P Sbjct: 196 LNTETYGVPQTRSRAVLIARRAGLGAPSLPEASH 229 >gi|226088552|dbj|BAH37021.1| chromomethylase OsMET2c [Oryza sativa Japonica Group] Length = 749 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 15/29 (51%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 +G+PQ R R++++ + FP P Sbjct: 477 YGLPQFRMRVFLLGCHSKEKLPPFPLPTH 505 >gi|23954253|emb|CAD42050.1| hypothetical protein [Escherichia coli] Length = 233 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG 40 A ++G+PQRR+RL ++ V P K ++ Sbjct: 39 NAENYGIPQRRKRLVLLASRVGKV--TLPEITHGKNKIP 75 >gi|300728104|ref|ZP_07061476.1| C-5 cytosine-specific DNA methylase [Prevotella bryantii B14] gi|299774618|gb|EFI71238.1| C-5 cytosine-specific DNA methylase [Prevotella bryantii B14] Length = 382 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 2/75 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 +KA D GVPQ RER + N +V ++FP L L + + + + Sbjct: 162 IKAMDCGVPQMRERNIFLLVRNDQNVSWEFPKQLP-VVNLEEAIGHLPSLDPQLREGMEV 220 Query: 60 GHQKRKENNKIAGKG 74 +K + K +G Sbjct: 221 TLEKFPDFEKKKAEG 235 >gi|283457186|ref|YP_003361755.1| site-specific DNA methylase [Rothia mucilaginosa DY-18] gi|283133170|dbj|BAI63935.1| site-specific DNA methylase [Rothia mucilaginosa DY-18] Length = 439 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 14/19 (73%) Query: 1 MKACDFGVPQRRERLYIID 19 + A ++G PQ+R+R+YI Sbjct: 185 INAAEYGHPQKRKRVYIYA 203 >gi|332308313|ref|YP_004436164.1| DNA-cytosine methyltransferase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175642|gb|AEE24896.1| DNA-cytosine methyltransferase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 522 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 FG+PQRR R+ ++ P + ++ L + + D + + L + Sbjct: 248 FGIPQRRHRVILVGVREDLH--IDPEEIALEKHAPTCLFDALSDLPPLRSGLSK 299 >gi|295664785|ref|XP_002792944.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb01] gi|226278465|gb|EEH34031.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb01] Length = 1371 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 30/100 (30%), Gaps = 8/100 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK------PRLGDILEEHIDDKSTIS 54 + A FG PQ R RL+I P LGD K Sbjct: 957 LDAWSFGAPQSRSRLFIFIAAPGLQLPAHPPLTHSHLSKTTQKSLGDAPNGLPFGKRRWD 1016 Query: 55 NKLWEGHQKRKENNK--IAGKGFGYGLFFENSATTNTLSA 92 +++ K G+G + + + T T SA Sbjct: 1017 IPVFDFLCVSKSLMDLPRIGRGKITPVAYPDHRTMRTESA 1056 >gi|255946093|ref|XP_002563814.1| Pc20g13340 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588549|emb|CAP86663.1| Pc20g13340 [Penicillium chrysogenum Wisconsin 54-1255] Length = 627 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 8/99 (8%) Query: 5 DFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQKR 64 ++GVPQ R+RL +I V + P P G + E I + H Sbjct: 469 EYGVPQERKRLLLIAAGPGEVLPHYAQPTHGMPGHGLLPRETISSTIDNIPPDADDHNVE 528 Query: 65 KENNKIAGKGFGYGLFFENSATTNTLSAR-----YYKDG 98 + A F+ + T++ Y+ G Sbjct: 529 GALERWALSHRPS---FDRHSLARTITCGGGEYNYHPSG 564 >gi|255588381|ref|XP_002534588.1| cytosine-specific methyltransferase, putative [Ricinus communis] gi|223524973|gb|EEF27795.1| cytosine-specific methyltransferase, putative [Ricinus communis] Length = 362 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 14/26 (53%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A +GVPQ+R RL +I E Sbjct: 188 LDASRYGVPQKRSRLIVIGLEKQLAE 213 >gi|90425781|ref|YP_534151.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisB18] gi|90107795|gb|ABD89832.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisB18] Length = 374 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 17/44 (38%), Gaps = 2/44 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILE 44 ++ D+G PQ R+RL ++ + P D+ Sbjct: 163 LQVADYGTPQARKRLVLLAGRG--FDIDLPPATHSSTSGFDLPP 204 >gi|114330146|ref|YP_746368.1| DNA-cytosine methyltransferase [Nitrosomonas eutropha C91] gi|114307160|gb|ABI58403.1| DNA-cytosine methyltransferase [Nitrosomonas eutropha C91] Length = 497 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 16/26 (61%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A FGV QRR+R++++ V+ Sbjct: 183 LDAQHFGVAQRRKRVFLVASGRNDVD 208 >gi|300905017|ref|ZP_07122835.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1] gi|301305818|ref|ZP_07211903.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1] gi|300403166|gb|EFJ86704.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1] gi|300838908|gb|EFK66668.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1] gi|315254408|gb|EFU34376.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 85-1] Length = 354 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 A +GVPQ RERL +I + V P+P Sbjct: 165 AAWYGVPQTRERLVLIASKDFYV--ALPSPTH 194 >gi|288929280|ref|ZP_06423125.1| modification methylase HphIA (Cytosine-specific methyltransferase HphIA) [Prevotella sp. oral taxon 317 str. F0108] gi|288329382|gb|EFC67968.1| modification methylase HphIA (Cytosine-specific methyltransferase HphIA) [Prevotella sp. oral taxon 317 str. F0108] Length = 370 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 15/30 (50%), Positives = 22/30 (73%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPT 31 KA +FGVP++RERL++I LN S+E + Sbjct: 160 KAIEFGVPEKRERLFVIGTLNKSIELEKLE 189 >gi|153939582|ref|YP_001391675.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum F str. Langeland] gi|152935478|gb|ABS40976.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum F str. Langeland] gi|295319706|gb|ADG00084.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum F str. 230613] Length = 476 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 1/42 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 ++ACD+G P R+R ++I +P P ++ Sbjct: 165 LRACDYGAPTTRKRFFMIA-RCDGKPIVWPESTHGDPEQIEV 205 >gi|116062014|dbj|BAF34635.1| DNA methyltransferase 1a [Brassica rapa] Length = 1528 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 18/34 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +GV Q R+R +I V ++P P+ Sbjct: 1266 LEAGAYGVSQSRKRAFIWAAAPDEVLPEWPEPMH 1299 >gi|315580106|gb|EFU92297.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0309A] Length = 382 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 2/43 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDI 42 + + + VPQ RER+++I + FP ++ Sbjct: 147 LNSKAY-VPQSRERVFLIGHSRDICTEQVFPIIESSATSDQNL 188 >gi|315574420|gb|EFU86611.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0309B] Length = 386 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 2/43 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDI 42 + + + VPQ RER+++I + FP ++ Sbjct: 151 LNSKAY-VPQSRERVFLIGHSRDICTEQVFPIIESSATSDQNL 192 >gi|227553877|ref|ZP_03983924.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis HH22] gi|307285310|ref|ZP_07565454.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0860] gi|227176989|gb|EEI57961.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis HH22] gi|306502887|gb|EFM72149.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0860] Length = 380 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 2/43 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDI 42 + + + VPQ RER+++I + FP ++ Sbjct: 147 LNSKAY-VPQSRERVFLIGHSRDICTEQVFPIIESSATSDQNL 188 >gi|227517066|ref|ZP_03947115.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0104] gi|255975250|ref|ZP_05425836.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T2] gi|227075490|gb|EEI13453.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0104] gi|255968122|gb|EET98744.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T2] Length = 384 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 2/43 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDI 42 + + + VPQ RER+++I + FP ++ Sbjct: 151 LNSKAY-VPQSRERVFLIGHSRDICTEQVFPIIESSATSDQNL 192 >gi|307155289|ref|YP_003890673.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] gi|306985517|gb|ADN17398.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] Length = 387 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 31/122 (25%), Gaps = 30/122 (24%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP---------LGIKPRLGDILEEHIDDKS 51 +++ +GVPQ R R I +P P + + + Sbjct: 218 LESAAYGVPQIRPRAIFIANRLKMPN-PYPEPQLLPEQYLSIESAISDLPEYKSIPEINH 276 Query: 52 TISNKLWEGHQKRKENN------KIAGKGFGYGLFFENSATT--------------NTLS 91 + E ++ + K F + S T +S Sbjct: 277 EWTRHSSEYMKRIAQVPPGGSLYKSYADAFKRQYLGKPSMTIKENHGGTHIHPYLNRVIS 336 Query: 92 AR 93 AR Sbjct: 337 AR 338 >gi|29376841|ref|NP_815995.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis V583] gi|29344306|gb|AAO82065.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis V583] Length = 331 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 2/43 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDI 42 + + + VPQ RER+++I + FP ++ Sbjct: 98 LNSKAY-VPQSRERVFLIGHSRDICTEQVFPIIESSATSDQNL 139 >gi|315650298|ref|ZP_07903370.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] gi|315487409|gb|EFU77719.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] Length = 644 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 15/19 (78%) Query: 1 MKACDFGVPQRRERLYIID 19 + A +GVPQRR+R+Y++ Sbjct: 195 LDAQYWGVPQRRKRIYLVA 213 >gi|166365618|ref|YP_001657891.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843] gi|166087991|dbj|BAG02699.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843] Length = 412 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 7/67 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A VPQ+RERL II +++ FP L L ++ S+ E Sbjct: 212 LSAQFLDVPQKRERLIIIATRQDLNIKPIFPQYRNYTISLKKAL------ENCPSSPGVE 265 Query: 60 GHQKRKE 66 +++KE Sbjct: 266 YKERKKE 272 >gi|15236676|ref|NP_192638.1| DNA (cytosine-5-)-methyltransferase, putative [Arabidopsis thaliana] gi|7267541|emb|CAB78023.1| Met2-type cytosine DNA-methyltransferase-like protein [Arabidopsis thaliana] gi|332657308|gb|AEE82708.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana] Length = 1512 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 20/41 (48%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGD 41 ++A +GV Q R+R+ I V ++P P+ + G Sbjct: 1249 LEAGTYGVSQPRKRVIIWAASPEEVLPEWPEPMHVFDNPGS 1289 >gi|167571686|ref|ZP_02364560.1| C-5 cytosine-specific DNA methylase [Burkholderia oklahomensis C6786] Length = 382 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 17/47 (36%), Gaps = 6/47 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHI 47 M A F +PQ R RL++I FP P + D Sbjct: 149 MNAIHF-LPQSRPRLFVIGVRK-----SFPVPRNLIAGGPDGEWHPP 189 >gi|325685533|gb|EGD27624.1| modification methylase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 395 Score = 38.1 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 28/79 (35%), Gaps = 8/79 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A +FGVPQ R R Y++ L + + + D + + + +K Sbjct: 195 LDARNFGVPQARVRTYMLSVLADT--------PKRQTMVRDYFFGNNLEMVKLPDKAVRT 246 Query: 61 HQKRKENNKIAGKGFGYGL 79 + + + + + Sbjct: 247 LENYLKLDYSNEDYYEEAV 265 >gi|261338523|ref|ZP_05966407.1| modification methylase Sau3AI [Bifidobacterium gallicum DSM 20093] gi|270276533|gb|EFA22387.1| modification methylase Sau3AI [Bifidobacterium gallicum DSM 20093] Length = 423 Score = 38.1 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 13/73 (17%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPT------------PLGIKPRLGDILEEHID 48 + A ++G+PQRR R+YI + + ++ P + + + D Sbjct: 179 INAGEYGMPQRRRRVYIYA-QHDAPQWDLKERLFGTGVEARAFPAELDVKQQEETFNISD 237 Query: 49 DKSTISNKLWEGH 61 D ++ +G Sbjct: 238 DPYAMTETFGKGL 250 >gi|121583544|ref|YP_973963.1| DNA-cytosine methyltransferase [Polaromonas naphthalenivorans CJ2] gi|120596788|gb|ABM40221.1| DNA-cytosine methyltransferase [Polaromonas naphthalenivorans CJ2] Length = 373 Score = 38.1 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A D+G PQ+R+RL ++ L V + P Sbjct: 170 LNAADYGAPQQRKRLVLLASLLGPV--QMPAATHP 202 >gi|293570787|ref|ZP_06681836.1| cytosine-specific methyltransferase NlaX [Enterococcus faecium E980] gi|291609140|gb|EFF38413.1| cytosine-specific methyltransferase NlaX [Enterococcus faecium E980] Length = 310 Score = 38.1 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 38/113 (33%), Gaps = 24/113 (21%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGI--------------KPRLGDILEEH 46 + +F V Q RER++II L + K FP + L Sbjct: 99 NSKEF-VAQNRERVFIIGHLRGAGTKKIFPLTREEGSADQKSGRIHLAGTTHAANDLSRF 157 Query: 47 IDDKSTISNKLWEGH-----QKRKENNKIAGKGFGYGL---FFENSATTNTLS 91 +++ ++ L + K+ G G+ ++ S + T++ Sbjct: 158 TRERTYYTDGLMGILTATDYKTPKQIVVGNVNPSGGGMNGQVYDASGLSPTIT 210 >gi|292897792|ref|YP_003537161.1| cytosine-specific DNA methylase [Erwinia amylovora ATCC 49946] gi|291197640|emb|CBJ44735.1| putative modification methylase (cytosine-specific DNA methylase) [Erwinia amylovora ATCC 49946] Length = 372 Score = 38.1 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 2/50 (4%) Query: 2 KACDFGVPQRRERLYIIDFLN-PSVEFKFPT-PLGIKPRLGDILEEHIDD 49 FGVPQ R R+ +I + + + FP + L L D+ Sbjct: 153 NFSHFGVPQNRIRVILIAIKDLEYLPYIFPEVEMNKDLTLAKTLAGITDE 202 >gi|239624756|ref|ZP_04667787.1| DNA-cytosine methyltransferase [Clostridiales bacterium 1_7_47_FAA] gi|239521142|gb|EEQ61008.1| DNA-cytosine methyltransferase [Clostridiales bacterium 1_7_47FAA] Length = 420 Score = 38.1 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 12/21 (57%) Query: 2 KACDFGVPQRRERLYIIDFLN 22 A D+G QRR R++I N Sbjct: 159 NAADYGAAQRRRRIFIFACNN 179 >gi|56479059|ref|YP_160648.1| modification methylase (cytosine-specific methyltransferase [Aromatoleum aromaticum EbN1] gi|56315102|emb|CAI09747.1| Modification methylase (Cytosine-specific methyltransferase [Aromatoleum aromaticum EbN1] Length = 538 Score = 38.1 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 36/110 (32%), Gaps = 18/110 (16%) Query: 2 KACDF-------GVPQRRERLYIIDFLNPSVE-----FKFPTPLGIKP-RLGDILEEHID 48 A DF GVPQ R R+ ++ +K P P + + + + Sbjct: 241 DARDFIVRAERHGVPQARHRVILLGIREDVCNAKGAGWKLPVLQEDPPVSVFEAIGDLPP 300 Query: 49 DKSTIS-----NKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 +S IS KLW R G + + ++SAR Sbjct: 301 LRSRISRGKDDEKLWALLLARHCREMAEQAGLKKHGLYGVAEVLGSVSAR 350 >gi|317489194|ref|ZP_07947712.1| C-5 cytosine-specific DNA methylase [Eggerthella sp. 1_3_56FAA] gi|325832321|ref|ZP_08165320.1| DNA (cytosine-5-)-methyltransferase [Eggerthella sp. HGA1] gi|316911702|gb|EFV33293.1| C-5 cytosine-specific DNA methylase [Eggerthella sp. 1_3_56FAA] gi|325486157|gb|EGC88611.1| DNA (cytosine-5-)-methyltransferase [Eggerthella sp. HGA1] Length = 447 Score = 38.1 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 15/22 (68%) Query: 1 MKACDFGVPQRRERLYIIDFLN 22 + A FG+ QRRER++++ L Sbjct: 142 LDAQFFGLAQRRERVFLVGVLG 163 >gi|312901958|ref|ZP_07761220.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0470] gi|311290894|gb|EFQ69450.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0470] Length = 380 Score = 38.1 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 27/92 (29%), Gaps = 23/92 (25%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + + +PQ RER+++I + + FP +I Sbjct: 147 LNSKAY-IPQSRERIFLIGHSRDACTEQVFPIIGPSSTSDQNI----------------- 188 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 R N G + + TL+ Sbjct: 189 ----RNLVNINPSNRGMGGQVYGSDGVAPTLT 216 >gi|257879735|ref|ZP_05659388.1| DNA methylase [Enterococcus faecium 1,230,933] gi|257891595|ref|ZP_05671248.1| DNA methylase [Enterococcus faecium 1,231,410] gi|260559428|ref|ZP_05831609.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium C68] gi|293564065|ref|ZP_06678471.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium E1162] gi|314942818|ref|ZP_07849634.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133C] gi|314953502|ref|ZP_07856417.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133A] gi|314992544|ref|ZP_07857963.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133B] gi|314997817|ref|ZP_07862727.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133a01] gi|257813963|gb|EEV42721.1| DNA methylase [Enterococcus faecium 1,230,933] gi|257827955|gb|EEV54581.1| DNA methylase [Enterococcus faecium 1,231,410] gi|260074527|gb|EEW62848.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium C68] gi|291603983|gb|EFF33511.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium E1162] gi|313588158|gb|EFR67003.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133a01] gi|313592911|gb|EFR71756.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133B] gi|313594484|gb|EFR73329.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133A] gi|313598453|gb|EFR77298.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133C] Length = 235 Score = 38.1 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 27/92 (29%), Gaps = 23/92 (25%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + + + +PQ RER+++I + + FP +I Sbjct: 2 LNSKAY-IPQSRERIFLIGHSRDACTEQVFPIIGPSSTSDQNI----------------- 43 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 R N G + + TL+ Sbjct: 44 ----RNLVNINPSNRGMGGQVYGSDGVAPTLT 71 >gi|73853882|ref|NP_001027526.1| DNA (cytosine-5)-methyltransferase 1 [Sus scrofa] gi|66363554|gb|AAY45793.1| DNA methyltransferase 1 [Sus scrofa] Length = 1610 Score = 38.1 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 2/55 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 ++A +GV Q R R I+ FP PL L +DDK +SN Sbjct: 1295 LQAGQYGVAQTRRRAIILAAAPGEQLPLFPEPLFAPRACQ--LSVVVDDKKFVSN 1347 >gi|23097628|ref|NP_691094.1| site-specific DNA-methyltransferase [Oceanobacillus iheyensis HTE831] gi|22775851|dbj|BAC12129.1| site-specific DNA-methyltransferase (cytosine-specific) [Oceanobacillus iheyensis HTE831] Length = 596 Score = 38.1 bits (87), Expect = 0.48, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 30/94 (31%), Gaps = 3/94 (3%) Query: 1 MKACDFGVPQRRERLYIID---FLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A FGVPQRR+R ++ + K PT L + + D + K Sbjct: 366 LDASFFGVPQRRKRFMVLGVRKDKVKVNKVKLPTQLNCIMTPYTVFDAISDLEKISPQKE 425 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + + N+ N +S Sbjct: 426 LKNYIPSSYIKGKKLSPLQSYFRKYNNRIYNHIS 459 >gi|322377723|ref|ZP_08052213.1| modification methylase HgiDII [Streptococcus sp. M334] gi|321281488|gb|EFX58498.1| modification methylase HgiDII [Streptococcus sp. M334] Length = 351 Score = 37.7 bits (86), Expect = 0.48, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTP-LGIKPRLGDILEEHIDDK 50 A D+GVPQ R+RL ++ + P P L D +E+ + K Sbjct: 153 APDYGVPQTRKRLLLLASKFGDISLIEPEFNSDTHPTLRDTIEKLPEIK 201 >gi|310791056|gb|EFQ26585.1| C-5 cytosine-specific DNA methylase [Glomerella graminicola M1.001] Length = 750 Score = 37.7 bits (86), Expect = 0.48, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 16/33 (48%) Query: 5 DFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 ++G+PQ R+RL +I FP+ + Sbjct: 468 NWGLPQTRKRLIMIGACPGEKLPPFPSATHSET 500 >gi|149204151|ref|ZP_01881119.1| C-5 cytosine-specific DNA methylase [Roseovarius sp. TM1035] gi|149142593|gb|EDM30638.1| C-5 cytosine-specific DNA methylase [Roseovarius sp. TM1035] Length = 366 Score = 37.7 bits (86), Expect = 0.48, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 18/58 (31%), Gaps = 1/58 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A F VPQ R RL+II P L S + K W Sbjct: 137 IDASHF-VPQSRPRLFIIAVRRDIDATTLCQPQARGLFCSPRLVRFHGACSRVIQKNW 193 >gi|118601930|ref|YP_908630.1| site-specific DNA methylase [Photobacterium damselae subsp. piscicida] gi|118614668|ref|YP_908451.1| cytosine methyl transferase [Photobacterium damselae subsp. piscicida] gi|134044817|ref|YP_001102148.1| C-5 cytosine-specific DNA methylase family protein [Yersinia pestis biovar Orientalis str. IP275] gi|165937975|ref|ZP_02226535.1| site-specific DNA methylase [Yersinia pestis biovar Orientalis str. IP275] gi|229516146|ref|ZP_04405595.1| site-specific DNA methylase [Vibrio cholerae RC9] gi|118596759|dbj|BAF38063.1| cytosine methyl transferase [Photobacterium damselae subsp. piscicida] gi|118596939|dbj|BAF38242.1| Site-specific DNA methylase [Photobacterium damselae subsp. piscicida] gi|133905351|gb|ABO42113.1| C-5 cytosine-specific DNA methylase family protein [Yersinia pestis biovar Orientalis str. IP275] gi|165913998|gb|EDR32615.1| site-specific DNA methylase [Yersinia pestis biovar Orientalis str. IP275] gi|229346796|gb|EEO11765.1| site-specific DNA methylase [Vibrio cholerae RC9] gi|324007643|gb|EGB76862.1| C-5 cytosine-specific DNA methylase [Escherichia coli MS 57-2] Length = 475 Score = 37.7 bits (86), Expect = 0.48, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 37/112 (33%), Gaps = 21/112 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDK--STISNKLW 58 + DFG Q RER Y++ + F P P R G L I+ + Sbjct: 302 LNGLDFGAYQGRERYYMVASV--FPGFVPPKPEQ---RAGGRLWPVIEKHLGDCADVTVL 356 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLS---------ARYYKDGSEI 101 + Q R+ ++ S + T+ A Y +DG I Sbjct: 357 KSIQARESTSRRMP-----AFLTRESTSCPTILKSQDRGVKDAVYIQDGGRI 403 >gi|117676134|ref|YP_863710.1| C-5 cytosine-specific DNA methylase [Shewanella sp. ANA-3] gi|117614958|gb|ABK50411.1| C-5 cytosine-specific DNA methylase [Shewanella sp. ANA-3] Length = 457 Score = 37.7 bits (86), Expect = 0.49, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 17/99 (17%) Query: 8 VPQRRERLYIIDFLN--PSVEFK--------FPTPLGIKPRLGDILEEHIDDKSTISNKL 57 V +RR+RL ++ + EF FP LG IL+ D Sbjct: 287 VLERRKRLAVVALSSGIDMSEFDIYSLMPSRFPE-----ASLGHILDAVPDGDDRYKP-- 339 Query: 58 WEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 ++ ++E +K AGKGF L +S + Y K Sbjct: 340 FDYLAAKEERDKAAGKGFARQLLTADSDGCGVIGKDYAK 378 >gi|119355930|ref|YP_910574.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM 266] gi|119353279|gb|ABL64150.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM 266] Length = 371 Score = 37.7 bits (86), Expect = 0.49, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 30/108 (27%), Gaps = 13/108 (12%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG------IKPRLGDILEEHIDDKS---TI 53 A D+G PQ R R +I + P P + D + K Sbjct: 168 AQDYGSPQVRRRFVLIASRLGKI--TLPAPTHGPNTKNSYVTVHDAIGNLPSVKHGTEHP 225 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYY--KDGS 99 N+ + H+ + + G L Y KDG Sbjct: 226 DNQNYPNHRAAMLSALNLERIRHTGANGRRDWPERLLPKCYAQKKDGK 273 >gi|295687890|ref|YP_003591583.1| DNA-cytosine methyltransferase [Caulobacter segnis ATCC 21756] gi|295429793|gb|ADG08965.1| DNA-cytosine methyltransferase [Caulobacter segnis ATCC 21756] Length = 379 Score = 37.7 bits (86), Expect = 0.49, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 10/22 (45%) Query: 2 KACDFGVPQRRERLYIIDFLNP 23 A DFG R R++++ Sbjct: 148 NAADFGAATVRNRIFVVGIRKD 169 >gi|325131565|gb|EGC54272.1| adenine/cytosine DNA methyltransferase [Neisseria meningitidis M6190] Length = 877 Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 25/97 (25%), Gaps = 6/97 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK----FPTPLGIKPRLGDILEEHIDDKSTISNK 56 + D+G R R +I FP P+ L + + Sbjct: 215 LNFKDYGANSSRTRTLVIGVRKDIHHITPYDIFPKQTP--PKTLRTLLADLPPLMQMGEI 272 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + L SA NT SAR Sbjct: 273 SDDDIYHSYREFDRRMLPWIAQLKEGESAFQNTDSAR 309 >gi|11877311|emb|CAC19024.1| putative adenine/cytosine DNA methyltransferase [Neisseria meningitidis] Length = 862 Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 25/97 (25%), Gaps = 6/97 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK----FPTPLGIKPRLGDILEEHIDDKSTISNK 56 + D+G R R +I FP P+ L + + Sbjct: 200 LNFKDYGANSSRTRTLVIGVRKDIHHITPYDIFPKQTP--PKTLRTLLADLPPLMQMGEI 257 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + L SA NT SAR Sbjct: 258 SDDDIYHSYREFDRRMLPWIAQLKEGESAFQNTDSAR 294 >gi|50365120|ref|YP_053545.1| deoxycytosine methylase [Mesoplasma florum L1] gi|50363676|gb|AAT75661.1| deoxycytosine methylase [Mesoplasma florum L1] Length = 455 Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 7/81 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFK--FPT----PLGIKPRLGDILEEHIDDKSTI 53 ++A +G PQ R+R++ + + EFK F + + DI +E K T Sbjct: 219 LEANKYGCPQNRKRVFALSVRKDVTKEFKDTFLESKRTSIKEEKTPFDISKEIGIYKKTH 278 Query: 54 SNKLWEGHQKRKENNKIAGKG 74 + ++ +N I Sbjct: 279 ELLREDYSIEKYKNEAINAIP 299 >gi|325971313|ref|YP_004247504.1| DNA-cytosine methyltransferase [Spirochaeta sp. Buddy] gi|324026551|gb|ADY13310.1| DNA-cytosine methyltransferase [Spirochaeta sp. Buddy] Length = 516 Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 30/88 (34%), Gaps = 1/88 (1%) Query: 2 KACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 +FGVPQ RER +I L VE + P + + I + E Sbjct: 293 NTVNFGVPQLRERFVMIGVLKQLKVEPRGPERTITLEEDYRTVGDAIRNLENYEPGYSEN 352 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTN 88 + K + I + F++ N Sbjct: 353 SKGIKVQDIIKNENNPLNKLFDSDRIYN 380 >gi|121634167|ref|YP_974412.1| putative DNA methylase [Neisseria meningitidis FAM18] gi|120865873|emb|CAM09607.1| putative DNA methylase [Neisseria meningitidis FAM18] gi|325139180|gb|EGC61726.1| Modification methylase HgaIA [Neisseria meningitidis ES14902] Length = 862 Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 25/97 (25%), Gaps = 6/97 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK----FPTPLGIKPRLGDILEEHIDDKSTISNK 56 + D+G R R +I FP P+ L + + Sbjct: 200 LNFKDYGANSSRTRTLVIGVRKDIHHITPYDIFPKQTP--PKTLRTLLADLPPLMQMGEI 257 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + L SA NT SAR Sbjct: 258 SDDDIYHSYREFDRRMLPWIAQLKEGESAFQNTDSAR 294 >gi|2654108|gb|AAC49931.1| cytosine-5 DNA methyltransferase [Pisum sativum] Length = 1554 Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 18/34 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A FGV Q R+R +I V ++P P+ Sbjct: 1295 LEAGAFGVSQSRKRAFIWAASPEDVLPEWPEPMH 1328 >gi|304383753|ref|ZP_07366212.1| modification methylase HgiDII [Prevotella marshii DSM 16973] gi|304335277|gb|EFM01548.1| modification methylase HgiDII [Prevotella marshii DSM 16973] Length = 360 Score = 37.7 bits (86), Expect = 0.52, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 5 DFGVPQRRERLYIIDFLNPSVEFKFPT-PLGIKPRLGDILEEHIDDKSTISNKLWEGHQK 63 D+G+PQ R+RL ++ ++E PT + + + + + K+ ++K H+ Sbjct: 166 DYGIPQTRKRLVLLASRLGNIELINPTHKPNEYKTVKETIGDLPELKAGETDKNDSLHRA 225 Query: 64 RKENN 68 + + Sbjct: 226 KALSP 230 >gi|325127388|gb|EGC50322.1| cytosine-specific methyltransferase HgiDII [Neisseria meningitidis N1568] gi|325204962|gb|ADZ00416.1| cytosine-specific methyltransferase HgiDII [Neisseria meningitidis M01-240355] Length = 330 Score = 37.7 bits (86), Expect = 0.52, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 19/42 (45%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 D+G+PQ R+R +I + + G + + D+L Sbjct: 136 NTADYGIPQSRKRFTLIANRITEEKLEPAKYSGKRLTVRDVL 177 >gi|145604116|ref|XP_360423.2| hypothetical protein [Magnaporthe oryzae 70-15] gi|145012186|gb|EDJ96842.1| predicted protein [Magnaporthe oryzae 70-15] Length = 326 Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 5/61 (8%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKF-PTPLGIKPRL----GDILEEHIDDKSTISNKL 57 A FG+PQRRE + ++ + F P P P D L + + ++ Sbjct: 81 AGSFGLPQRREHIIVLAVRKDLIPGPFSPRPAERDPDQTLELKDFLLSYEEYLRLNKDRY 140 Query: 58 W 58 W Sbjct: 141 W 141 >gi|53728781|ref|ZP_00135132.2| COG0270: Site-specific DNA methylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 354 Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 1 MKACDFGVPQRRERLYIIDF-LNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A FGV QRR+R++++ S+ P G++ + + + I + Sbjct: 173 INAQYFGVAQRRKRVFLVASARKRSIAQILIEPKGLRGDFNSSKPKKENTATYIESSFGS 232 Query: 60 GHQ 62 Q Sbjct: 233 YRQ 235 >gi|307546988|ref|YP_003899467.1| DNA-cytosine methyltransferase [Halomonas elongata DSM 2581] gi|307219012|emb|CBV44282.1| DNA-cytosine methyltransferase [Halomonas elongata DSM 2581] Length = 566 Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 15/25 (60%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV 25 +KA + G+PQ R R+ ++ N V Sbjct: 257 IKADEHGIPQARHRVILVGVRNDIV 281 >gi|116751262|ref|YP_847949.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB] gi|116700326|gb|ABK19514.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB] Length = 371 Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 18/38 (47%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL 39 ++GVPQ+R RL ++ + P G +PR Sbjct: 162 NCAEYGVPQQRNRLVLLASKLGPISLLTPEQFGKRPRT 199 >gi|300728105|ref|ZP_07061477.1| modification methylase HgaIA [Prevotella bryantii B14] gi|299774619|gb|EFI71239.1| modification methylase HgaIA [Prevotella bryantii B14] Length = 382 Score = 37.7 bits (86), Expect = 0.54, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 31/84 (36%), Gaps = 5/84 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFPTPLGIKPRL----GDILEEHIDDKSTISN 55 + D+GVPQ R+R+ I+ + ++ P K + GD+ K Sbjct: 158 IDTDDYGVPQTRDRMIILMTRHGQRRKWTLPPVEQHKVTMEEAIGDLPSIDPFVKDIPYE 217 Query: 56 KLWEGHQKRKENNKIAGKGFGYGL 79 + + +E + A + + Sbjct: 218 EFIQRFPLYEERRQQALAISPWNI 241 >gi|291439417|ref|ZP_06578807.1| DNA modification methylase M.NGOI [Streptomyces ghanaensis ATCC 14672] gi|291342312|gb|EFE69268.1| DNA modification methylase M.NGOI [Streptomyces ghanaensis ATCC 14672] Length = 338 Score = 37.7 bits (86), Expect = 0.54, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 21/61 (34%), Gaps = 2/61 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLN-PSVEFKFPTPL-GIKPRLGDILEEHIDDKSTISNKLW 58 + A DFGVPQ R + ++ F PTP G L + + W Sbjct: 143 LNAADFGVPQERLQGVLVALKKPWGRTFTPPTPTVSEHISAGRALRRSMGARGWPEADAW 202 Query: 59 E 59 Sbjct: 203 A 203 >gi|239931046|ref|ZP_04687999.1| putative 5-methylcytosine methyltransferase [Streptomyces ghanaensis ATCC 14672] Length = 345 Score = 37.7 bits (86), Expect = 0.54, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 21/61 (34%), Gaps = 2/61 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLN-PSVEFKFPTPL-GIKPRLGDILEEHIDDKSTISNKLW 58 + A DFGVPQ R + ++ F PTP G L + + W Sbjct: 150 LNAADFGVPQERLQGVLVALKKPWGRTFTPPTPTVSEHISAGRALRRSMGARGWPEADAW 209 Query: 59 E 59 Sbjct: 210 A 210 >gi|255280097|ref|ZP_05344652.1| site-specific DNA methylase [Bryantella formatexigens DSM 14469] gi|255269188|gb|EET62393.1| site-specific DNA methylase [Bryantella formatexigens DSM 14469] Length = 351 Score = 37.7 bits (86), Expect = 0.54, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 23/72 (31%), Gaps = 1/72 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G P R+R Y + + + FP + + + K + Sbjct: 162 LVAADYGAPTTRKRWYAVFWRDGRAV-TFPERTHSRGGINGLKPWEPICKYLDLQDFGKS 220 Query: 61 HQKRKENNKIAG 72 RK+ Sbjct: 221 IFGRKKPLAENT 232 >gi|3256424|dbj|BAA29107.1| 238aa long hypothetical modification methylase [Pyrococcus horikoshii OT3] Length = 238 Score = 37.7 bits (86), Expect = 0.54, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 6/47 (12%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID 48 A D+GVPQ R R++I ++E K P + + R+ D L + Sbjct: 82 NALDYGVPQVRRRVFI-----SNIELK-PRKIRSRKRVWDALRDIPP 122 >gi|71065540|ref|YP_264267.1| C-5 cytosine-specific DNA methylase [Psychrobacter arcticus 273-4] gi|71038525|gb|AAZ18833.1| probable C-5 cytosine-specific DNA methylase [Psychrobacter arcticus 273-4] Length = 488 Score = 37.7 bits (86), Expect = 0.54, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 ++ACD+G P R+R ++I + +P P Sbjct: 166 LRACDYGTPTIRKRFFLIARRDGLP-IAWPVVTHGDP 201 >gi|261368869|ref|ZP_05981752.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum variabile DSM 15176] gi|282568964|gb|EFB74499.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum variabile DSM 15176] Length = 565 Score = 37.7 bits (86), Expect = 0.55, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 4/58 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPL---GIKPRLGDILEEHIDDKSTIS 54 + A D+G PQ+R R +I S + P + D + + D K + Sbjct: 319 LCAADYGAPQKRMRFVVIGIKRDISEKIALPKGSYDADEYRTVKDAIGDLEDIKPVYT 376 >gi|152982884|ref|YP_001351698.1| site-specific DNA methylase [Janthinobacterium sp. Marseille] gi|151282961|gb|ABR91371.1| Site-specific DNA methylase [Janthinobacterium sp. Marseille] Length = 425 Score = 37.7 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 1/22 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNP 23 A F VPQ R+R+++I N Sbjct: 201 DAKHF-VPQSRQRVFVIGVRND 221 >gi|237731131|ref|ZP_04561612.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226906670|gb|EEH92588.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 665 Score = 37.7 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 ++ACD+G P R+R +++ ++P P+ ++ Sbjct: 214 LRACDYGAPTIRKRFFMV-MRCDGCPIQWPAVTHGDPKSLEV 254 >gi|240145320|ref|ZP_04743921.1| DNA (cytosine-5-)-methyltransferase [Roseburia intestinalis L1-82] gi|257202585|gb|EEV00870.1| DNA (cytosine-5-)-methyltransferase [Roseburia intestinalis L1-82] Length = 504 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 21/81 (25%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A +GVPQRR R+++I +F G+IL E S +W Sbjct: 189 LDAQFWGVPQRRRRIFLIA------DF-------GGHSAGEILFE--------SESVWRH 227 Query: 61 HQKRKENNKIAGKGFGYGLFF 81 +Q+ +E K A G G F Sbjct: 228 YQESREQRKKAAADLGGGTFD 248 >gi|224144433|ref|XP_002325288.1| DNA methyltransferase [Populus trichocarpa] gi|222862163|gb|EEE99669.1| DNA methyltransferase [Populus trichocarpa] Length = 1549 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 18/34 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +GV Q R+R +I + ++P P+ Sbjct: 1290 LEAGAYGVSQSRKRAFIWAASPEEILPEWPEPMH 1323 >gi|14330659|emb|CAC41108.1| site-specific DNA-methyltransferase (cytosine-specific) [Klebsiella pneumoniae] Length = 375 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 35/124 (28%), Gaps = 33/124 (26%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEF------------------KFPTPLGIKPRLGDILE 44 + DFGV Q+R R +I + + P P DI Sbjct: 159 SSDFGVAQKRGRFLMIGIDKSEGKIVPKLLKSDKTLTIRDVIGQLPPPPEDYKEHPDIPN 218 Query: 45 EHIDDKSTISNKL---------WE---GHQKRKENNKIAGKGFGYGLFFEN---SATTNT 89 + I+ + W+ + K + K+ G+ + T Sbjct: 219 HIKCKITKINEERFSHVPPGGGWKDIPYDLRLKCHQKVDTASGGWPDVYGRLEWDKQCPT 278 Query: 90 LSAR 93 ++A Sbjct: 279 ITAG 282 >gi|258624200|ref|ZP_05719150.1| C-5 cytosine-specific DNA methylase family protein [Vibrio mimicus VM603] gi|258583631|gb|EEW08430.1| C-5 cytosine-specific DNA methylase family protein [Vibrio mimicus VM603] Length = 475 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 36/112 (32%), Gaps = 21/112 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDK--STISNKLW 58 + DFG Q RER Y++ + F P P R G L I+ Sbjct: 302 LNGLDFGAYQGRERYYMVASV--FPGFVPPKPEQ---RAGGRLWPVIEKHLGDCADVTAL 356 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLS---------ARYYKDGSEI 101 + Q R+ ++ S + T+ A Y +DG I Sbjct: 357 KSIQARESTSRRMP-----AFLTRESTSCPTILKSQDRGVKDAVYIQDGGRI 403 >gi|242347989|ref|YP_002995550.1| C-5 cytosine-specific DNA methylase family protein [Aeromonas hydrophila] gi|242348125|ref|YP_002995685.1| C-5 cytosine-specific DNA methylase family protein [Escherichia coli] gi|224831714|gb|ACN66846.1| C-5 cytosine-specific DNA methylase family protein [Escherichia coli] gi|224831808|gb|ACN66939.1| C-5 cytosine-specific DNA methylase family protein [Aeromonas hydrophila] Length = 477 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 36/112 (32%), Gaps = 21/112 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDK--STISNKLW 58 + DFG Q RER Y++ + F P P R G L I+ Sbjct: 302 LNGLDFGAYQGRERYYMVASV--FPGFVPPKPEQ---RAGGRLWPVIEKHLGDCADVTAL 356 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLS---------ARYYKDGSEI 101 + Q R+ ++ S + T+ A Y +DG I Sbjct: 357 KSIQARESTSRRMP-----AFLTRESTSCPTILKSQDRGVKDAVYIQDGGRI 403 >gi|226227218|ref|YP_002761324.1| DNA methyltransferase [Gemmatimonas aurantiaca T-27] gi|226090409|dbj|BAH38854.1| DNA methyltransferase [Gemmatimonas aurantiaca T-27] Length = 447 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 34/119 (28%), Gaps = 23/119 (19%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 ++ CD+G P R+RL++I +P P K ++ + G Sbjct: 165 LRGCDYGSPTIRKRLFLIA-RCDGQPIVWPRPTHGKGLPKPWRAAAECIDWSLECRSIFG 223 Query: 61 HQKRKENNKIAGKGFGYGLF---FEN------------------SATTNTLSARYYKDG 98 + N G + A T++A Y K G Sbjct: 224 RPRPLAANTQKRIAAGMQRYVLGTPRPFIVQVQNASASDTPISIDAPLRTITA-YPKGG 281 >gi|134044470|ref|YP_001101757.1| hypothetical protein YR71pYR1_0063 [Yersinia ruckeri] gi|133904833|gb|ABO40850.1| hypothetical protein YR71pYR1_0063 [Yersinia ruckeri] Length = 475 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 36/112 (32%), Gaps = 21/112 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDK--STISNKLW 58 + DFG Q RER Y++ + F P P R G L I+ Sbjct: 302 LNGLDFGAYQGRERYYMVASV--FPGFVPPKPEQ---RAGGRLWPVIEKHLGDCADVTAL 356 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLS---------ARYYKDGSEI 101 + Q R+ ++ S + T+ A Y +DG I Sbjct: 357 KSIQARESTSRRMP-----AFLTRESTSCPTILKSQDRGVKDAVYIQDGGRI 403 >gi|134047186|ref|YP_001101937.1| C-5 cytosine-specific DNA methylase family protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|237640248|ref|YP_002891103.1| hypothetical protein peH4H_0060 [Escherichia coli] gi|237809968|ref|YP_002894407.1| hypothetical protein pAR060302_0061 [Escherichia coli] gi|237810156|ref|YP_002894595.1| hypothetical protein pAM04528_0059 [Salmonella enterica] gi|300925699|ref|ZP_07141558.1| C-5 cytosine-specific DNA methylase [Escherichia coli MS 182-1] gi|309796406|ref|ZP_07690814.1| C-5 cytosine-specific DNA methylase [Escherichia coli MS 145-7] gi|133905105|gb|ABO41120.1| C-5 cytosine-specific DNA methylase family protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|229561467|gb|ACQ77670.1| conserved hypothetical protein [Escherichia coli] gi|229561640|gb|ACQ77842.1| conserved hypothetical protein [Salmonella enterica] gi|229561823|gb|ACQ78024.1| conserved hypothetical protein [Escherichia coli] gi|300418200|gb|EFK01511.1| C-5 cytosine-specific DNA methylase [Escherichia coli MS 182-1] gi|308119911|gb|EFO57173.1| C-5 cytosine-specific DNA methylase [Escherichia coli MS 145-7] gi|327536501|gb|AEA95334.1| hypothetical protein pSD853_174_68 [Salmonella enterica subsp. enterica serovar Dublin] gi|332144496|dbj|BAK19716.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 475 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 36/112 (32%), Gaps = 21/112 (18%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDK--STISNKLW 58 + DFG Q RER Y++ + F P P R G L I+ Sbjct: 302 LNGLDFGAYQGRERYYMVASV--FPGFVPPKPEQ---RAGGRLWPVIEKHLGDCADVTAL 356 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLS---------ARYYKDGSEI 101 + Q R+ ++ S + T+ A Y +DG I Sbjct: 357 KSIQARESTSRRMP-----AFLTRESTSCPTILKSQDRGVKDAVYIQDGGRI 403 >gi|291537886|emb|CBL10997.1| DNA-methyltransferase (dcm) [Roseburia intestinalis XB6B4] Length = 473 Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 14/19 (73%) Query: 1 MKACDFGVPQRRERLYIID 19 + A +GVPQRR R++++ Sbjct: 189 LDAQFWGVPQRRRRIFLVA 207 >gi|260904526|ref|ZP_05912848.1| DNA-cytosine methyltransferase [Brevibacterium linens BL2] Length = 319 Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 14/35 (40%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 A ++G PQ+R+R +I L P Sbjct: 91 ATNYGAPQKRKRAVVIGRLRNLPRVDAPEITHPNK 125 >gi|225375653|ref|ZP_03752874.1| hypothetical protein ROSEINA2194_01278 [Roseburia inulinivorans DSM 16841] gi|225212510|gb|EEG94864.1| hypothetical protein ROSEINA2194_01278 [Roseburia inulinivorans DSM 16841] Length = 473 Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 14/19 (73%) Query: 1 MKACDFGVPQRRERLYIID 19 + A +GVPQRR R++++ Sbjct: 189 LDAQFWGVPQRRRRIFLVA 207 >gi|89097277|ref|ZP_01170167.1| hypothetical protein B14911_16900 [Bacillus sp. NRRL B-14911] gi|89088100|gb|EAR67211.1| hypothetical protein B14911_16900 [Bacillus sp. NRRL B-14911] Length = 416 Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 13/22 (59%) Query: 1 MKACDFGVPQRRERLYIIDFLN 22 + A ++G QRR R++I + Sbjct: 163 INAAEYGTAQRRRRIFIFAYDK 184 >gi|293568986|ref|ZP_06680299.1| methyl transferase [Enterococcus faecium E1071] gi|291588419|gb|EFF20254.1| methyl transferase [Enterococcus faecium E1071] Length = 380 Score = 37.7 bits (86), Expect = 0.60, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 2/43 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK-FPTPLGIKPRLGDI 42 + + + VPQ RER+++I + + FP +I Sbjct: 147 LNSKAY-VPQSRERVFLIGHSRDACTEQVFPIIGSTPTSDQNI 188 >gi|283462212|gb|ADB22400.1| DNA (cytosine-5-)-methyltransferase [Saccoglossus kowalevskii] Length = 820 Score = 37.7 bits (86), Expect = 0.61, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 19/50 (38%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 +GV Q R R I+ +P P + L ID+K SN Sbjct: 515 YGVAQTRRRAIILAAAPGEKLPFYPEPAHVFSPRACPLSVTIDEKKYESN 564 >gi|227875051|ref|ZP_03993196.1| possible DNA-cytosine methyltransferase [Mobiluncus mulieris ATCC 35243] gi|304390295|ref|ZP_07372248.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|306817338|ref|ZP_07451083.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris ATCC 35239] gi|227844329|gb|EEJ54493.1| possible DNA-cytosine methyltransferase [Mobiluncus mulieris ATCC 35243] gi|304326051|gb|EFL93296.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304649779|gb|EFM47059.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris ATCC 35239] Length = 468 Score = 37.7 bits (86), Expect = 0.61, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 29/93 (31%), Gaps = 2/93 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A FG+ QRR R+Y++ + PR + D + G Sbjct: 176 LDAQHFGLAQRRRRIYLVADFAGRSAPEILFEPASLPRNPESCGTQEQDHAHTPEASLGG 235 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + L +S TL+AR Sbjct: 236 RSSSVMLLDHHPQD--SRLTVNSSGVVQTLTAR 266 >gi|315222621|ref|ZP_07864510.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211] gi|315188307|gb|EFU22033.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211] Length = 417 Score = 37.7 bits (86), Expect = 0.62, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 14/24 (58%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV 25 A ++G+ Q+RERL ++ V Sbjct: 197 DASNYGIVQKRERLILVGHRKDLV 220 >gi|255591450|ref|XP_002535514.1| cytosine-specific methyltransferase, putative [Ricinus communis] gi|223522828|gb|EEF26867.1| cytosine-specific methyltransferase, putative [Ricinus communis] Length = 206 Score = 37.7 bits (86), Expect = 0.62, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 12/24 (50%), Gaps = 1/24 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS 24 + F PQ RER+ I+ F + Sbjct: 183 IDGAHF-TPQHRERIIIVGFRGKT 205 >gi|227485932|ref|ZP_03916248.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC 51172] gi|227235977|gb|EEI85992.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC 51172] Length = 358 Score = 37.7 bits (86), Expect = 0.62, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 31/91 (34%), Gaps = 3/91 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHIDDKSTISNKLW- 58 + + + GVPQ RER YI N + P +L + L + + N L Sbjct: 148 INSVESGVPQNRERTYICGIYNFENDKYLPDSRNFKVNKLKEKLNKSNFNGFNFFNSLIF 207 Query: 59 EGHQKRKENNKIAGKGFGYGLFFEN-SATTN 88 + Q E+ Y L + N Sbjct: 208 DSKQIYIEDIIDKSVDTKYYLDNPKLNEYIN 238 >gi|291238124|ref|XP_002738981.1| PREDICTED: DNA (cytosine-5-)-methyltransferase [Saccoglossus kowalevskii] Length = 1294 Score = 37.3 bits (85), Expect = 0.63, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 19/50 (38%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 +GV Q R R I+ +P P + L ID+K SN Sbjct: 989 YGVAQTRRRAIILAAAPGEKLPFYPEPAHVFSPRACPLSVTIDEKKYESN 1038 >gi|225571372|ref|ZP_03780368.1| hypothetical protein CLOHYLEM_07470 [Clostridium hylemonae DSM 15053] gi|225159848|gb|EEG72467.1| hypothetical protein CLOHYLEM_07470 [Clostridium hylemonae DSM 15053] Length = 479 Score = 37.3 bits (85), Expect = 0.63, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 2/54 (3%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISN 55 +GVPQ R+RL +I L V P + + + + ++T Sbjct: 155 NVASYGVPQNRKRLVMIGSLIKKV--HIPYGDHVGATVREFIGNIEAPENTTDE 206 >gi|145635992|ref|ZP_01791674.1| modification methylase HgiDII [Haemophilus influenzae PittAA] gi|145266758|gb|EDK06780.1| modification methylase HgiDII [Haemophilus influenzae PittAA] Length = 343 Score = 37.3 bits (85), Expect = 0.63, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 18/44 (40%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHI 47 D+GVPQRR R ++ + PT + +++ Sbjct: 150 ADYGVPQRRRRHVLLASRLGPIHLIDPTHKEKWINIKEVIGHLP 193 >gi|224541047|ref|ZP_03681586.1| hypothetical protein CATMIT_00198 [Catenibacterium mitsuokai DSM 15897] gi|224526044|gb|EEF95149.1| hypothetical protein CATMIT_00198 [Catenibacterium mitsuokai DSM 15897] Length = 418 Score = 37.3 bits (85), Expect = 0.63, Method: Composition-based stats. Identities = 7/25 (28%), Positives = 13/25 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV 25 + A ++G QRR R +I + + Sbjct: 175 INAAEYGARQRRRRTFIFAWRKDTK 199 >gi|293395454|ref|ZP_06639738.1| modification methylase HgiDII [Serratia odorifera DSM 4582] gi|291422138|gb|EFE95383.1| modification methylase HgiDII [Serratia odorifera DSM 4582] Length = 354 Score = 37.3 bits (85), Expect = 0.64, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 A +GVPQRR+R ++ L + P P Sbjct: 154 NAEKYGVPQRRKRFVLLASLLGPI--SIPEPTH 184 >gi|220930206|ref|YP_002507115.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10] gi|220000534|gb|ACL77135.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10] Length = 719 Score = 37.3 bits (85), Expect = 0.64, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 35/101 (34%), Gaps = 22/101 (21%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH--IDDKSTISNKLW 58 + A FGVPQRR R+Y++ +F G+IL E + T S W Sbjct: 176 IDAQYFGVPQRRRRIYLVA------DF-------ADRSAGEILFESEGMPRNFTPSGSPW 222 Query: 59 EGHQKRKENNKIAG-------KGFGYGLFFENSATTNTLSA 92 + +N G + + T TL A Sbjct: 223 QRTADNAKNCTGKTGDSITCLNDQGERVMSVSKDITATLRA 263 >gi|109946968|ref|YP_664196.1| DNA-cytosine methyltransferase [Helicobacter acinonychis str. Sheeba] gi|109714189|emb|CAJ99197.1| DNA-cytosine methyltransferase [Helicobacter acinonychis str. Sheeba] Length = 377 Score = 37.3 bits (85), Expect = 0.64, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 4/82 (4%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQ 62 + D+ VPQ R+R+ I + E L D+ ++ + + Sbjct: 164 SGDYEVPQTRKRVIIFGVRKNNKEL----LSKFYQNLDDLKSKNPPLSVKDAIGHLPKFR 219 Query: 63 KRKENNKIAGKGFGYGLFFENS 84 K KI K + L N+ Sbjct: 220 PLKTPLKINNKNISHELIGTNN 241 >gi|110740122|dbj|BAF01962.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana] Length = 603 Score = 37.3 bits (85), Expect = 0.65, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 18/34 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +GV Q R+R +I V ++P P+ Sbjct: 340 LEAGAYGVSQSRKRAFIWAAAPEEVLPEWPEPMH 373 >gi|33600653|ref|NP_888213.1| modification methylase [Bordetella bronchiseptica RB50] gi|33568253|emb|CAE32165.1| modification methylase [Bordetella bronchiseptica RB50] Length = 644 Score = 37.3 bits (85), Expect = 0.65, Method: Composition-based stats. Identities = 15/114 (13%), Positives = 30/114 (26%), Gaps = 24/114 (21%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG---------DILEEHIDDKS 51 M A D+G R RL+++ + +P K D ++ ++ KS Sbjct: 209 MNAADYGAGTTRTRLFMMARRDGMP-ITWPQATHHKKPAKGQKRWRAAADGIDWSVEGKS 267 Query: 52 TISNK--------------LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 K + + + G T++ Sbjct: 268 IFGRKRPLADATMRRIARGMKRYVLDIADPFIVPVTHQGADRVHNIREPARTIT 321 >gi|254420522|ref|ZP_05034246.1| C-5 cytosine-specific DNA methylase superfamily [Brevundimonas sp. BAL3] gi|196186699|gb|EDX81675.1| C-5 cytosine-specific DNA methylase superfamily [Brevundimonas sp. BAL3] Length = 598 Score = 37.3 bits (85), Expect = 0.65, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 1/36 (2%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR 38 A D+G P R+RL++I + +P + Sbjct: 197 AADYGAPTIRKRLFVIA-RSDGHPIVWPDITHAPRK 231 >gi|325475447|gb|EGC78628.1| hypothetical protein HMPREF9353_00209 [Treponema denticola F0402] Length = 354 Score = 37.3 bits (85), Expect = 0.66, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 27/84 (32%), Gaps = 8/84 (9%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHI--------DDKSTISNKL 57 +GVPQ R R +I +++ + P+ + L ++ E +T N Sbjct: 163 YGVPQHRRRFSLIATRLKNMDIRLPSADKNQITLDKVIGEINGFPKVKAGHRDNTDFNHT 222 Query: 58 WEGHQKRKENNKIAGKGFGYGLFF 81 G + K G Sbjct: 223 VAGLSDKSLRRLQKTKHNGGNRLD 246 >gi|170739778|ref|YP_001768433.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46] gi|168194052|gb|ACA15999.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46] Length = 423 Score = 37.3 bits (85), Expect = 0.66, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 15/22 (68%) Query: 1 MKACDFGVPQRRERLYIIDFLN 22 ++ ++GVPQ+R R +++ L Sbjct: 173 IRCSEYGVPQQRPRFFLVGLLK 194 >gi|329122250|ref|ZP_08250838.1| DNA (cytosine-5-)-methyltransferase [Haemophilus aegyptius ATCC 11116] gi|327473811|gb|EGF19228.1| DNA (cytosine-5-)-methyltransferase [Haemophilus aegyptius ATCC 11116] Length = 387 Score = 37.3 bits (85), Expect = 0.67, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 14/19 (73%) Query: 1 MKACDFGVPQRRERLYIID 19 + A FG+ QRR+R++++ Sbjct: 173 LNAQYFGLAQRRKRVFLVA 191 >gi|209544778|ref|YP_002277007.1| DNA-cytosine methyltransferase [Gluconacetobacter diazotrophicus PAl 5] gi|209532455|gb|ACI52392.1| DNA-cytosine methyltransferase [Gluconacetobacter diazotrophicus PAl 5] Length = 435 Score = 37.3 bits (85), Expect = 0.67, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 15/24 (62%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS 24 ++A D+GVPQRR R +I + Sbjct: 165 LRAADWGVPQRRPRFVLIAAPKGT 188 >gi|162149538|ref|YP_001603999.1| cytosine-specifi methyltransferase DdeI [Gluconacetobacter diazotrophicus PAl 5] gi|161788115|emb|CAP57719.1| putative cytosine-specifi methyltransferase DdeI [Gluconacetobacter diazotrophicus PAl 5] Length = 435 Score = 37.3 bits (85), Expect = 0.67, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 15/24 (62%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS 24 ++A D+GVPQRR R +I + Sbjct: 165 LRAADWGVPQRRPRFVLIAAPKGT 188 >gi|116062016|dbj|BAF34636.1| DNA methyltransferase 1b [Brassica rapa] Length = 1519 Score = 37.3 bits (85), Expect = 0.67, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 18/34 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +GV Q R+R +I V ++P P+ Sbjct: 1257 LEAGAYGVSQSRKRAFIWAAAPEEVLPEWPEPMH 1290 >gi|266620546|ref|ZP_06113481.1| DNA (cytosine-5-)-methyltransferase [Clostridium hathewayi DSM 13479] gi|288867840|gb|EFD00139.1| DNA (cytosine-5-)-methyltransferase [Clostridium hathewayi DSM 13479] Length = 521 Score = 37.3 bits (85), Expect = 0.68, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 11/22 (50%) Query: 2 KACDFGVPQRRERLYIIDFLNP 23 + FGVPQ R R +I + Sbjct: 311 NSLWFGVPQERRRFIMIGVRSD 332 >gi|188991808|ref|YP_001903818.1| hypothetical protein xccb100_2413 [Xanthomonas campestris pv. campestris str. B100] gi|167733568|emb|CAP51773.1| hypothetical protein predicted by Glimmer/Critica [Xanthomonas campestris pv. campestris] Length = 271 Score = 37.3 bits (85), Expect = 0.68, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 15/26 (57%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A FGV QRR+R++++ + Sbjct: 182 LDAQYFGVVQRRKRVFLVASGGDGFD 207 >gi|60544836|gb|AAX22756.1| DMT1 [Arabidopsis thaliana] Length = 1431 Score = 37.3 bits (85), Expect = 0.68, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 18/34 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +GV Q R+R +I V ++P P+ Sbjct: 1239 LEAGAYGVSQSRKRAFIWAAAPEEVLPEWPEPMH 1272 >gi|319936414|ref|ZP_08010830.1| cytosine-specific methyltransferase [Coprobacillus sp. 29_1] gi|319808529|gb|EFW05081.1| cytosine-specific methyltransferase [Coprobacillus sp. 29_1] Length = 418 Score = 37.3 bits (85), Expect = 0.68, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 24/97 (24%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G QRR R+YI + R +++ E + + +S ++ Sbjct: 169 INAADYGFAQRRRRVYIFAWQR-------------TTRYNNVITESVLEDIVLSEGIFAK 215 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKD 97 K Y + +N YKD Sbjct: 216 AFPIDIEAIERNKKREYCIGRKN-----------YKD 241 >gi|308389149|gb|ADO31469.1| Cytosine-specific methyltransferase NlaX [Neisseria meningitidis alpha710] Length = 275 Score = 37.3 bits (85), Expect = 0.68, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 12/19 (63%) Query: 1 MKACDFGVPQRRERLYIID 19 + A FGVP R R++++ Sbjct: 144 LNAAYFGVPTARRRVFLVA 162 >gi|21242948|ref|NP_642530.1| cytosine-specific DNA methyltransferase [Xanthomonas axonopodis pv. citri str. 306] gi|21108450|gb|AAM37066.1| cytosine-specific DNA methyltransferase [Xanthomonas axonopodis pv. citri str. 306] Length = 487 Score = 37.3 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 16/26 (61%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A FGV QRR+R++++ V+ Sbjct: 184 LDAQYFGVAQRRKRVFLVASGRGGVD 209 >gi|254884614|ref|ZP_05257324.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_3_47FAA] gi|254837407|gb|EET17716.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_3_47FAA] Length = 611 Score = 37.3 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 3/71 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFG R+R + I F S+ FP P K D+ + +K ++ + Sbjct: 191 LNAADFGAYTTRKRFFGI-FAKKSLPIVFPEPTHCKGGRQDMFSKL--EKWKPVKEVLDF 247 Query: 61 HQKRKENNKIA 71 + + Sbjct: 248 SDEGTTIFREK 258 >gi|91784577|ref|YP_559783.1| C-5 cytosine-specific DNA methylase [Burkholderia xenovorans LB400] gi|40019222|emb|CAE92946.1| putative DNA methyltransferase [Pseudomonas putida] gi|91688531|gb|ABE31731.1| C-5 cytosine-specific DNA methylase [Burkholderia xenovorans LB400] Length = 533 Score = 37.3 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 16/26 (61%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A FGV QRR+R++++ ++ Sbjct: 191 LDAQYFGVAQRRKRVFLVASGGDGLD 216 >gi|330985029|gb|EGH83132.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 422 Score = 37.3 bits (85), Expect = 0.70, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A F VPQ R R++I+ ++ +P+ + P + + + S + W Sbjct: 186 IDARHF-VPQSRPRVFIVGVHADVAIAPALLSPVPLDPWHPERMLKAYTGLSESAKNAW 243 >gi|331091354|ref|ZP_08340194.1| hypothetical protein HMPREF9477_00837 [Lachnospiraceae bacterium 2_1_46FAA] gi|330404515|gb|EGG84059.1| hypothetical protein HMPREF9477_00837 [Lachnospiraceae bacterium 2_1_46FAA] Length = 391 Score = 37.3 bits (85), Expect = 0.71, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 17/98 (17%) Query: 7 GVPQRRERLYIIDFLN----PSVEFKFPTPLGIKP---RLGDILEEHIDDKSTIS----- 54 GVPQ RER+ I+ + ++ + P G + +D+K IS Sbjct: 154 GVPQFRERVVILGIHSSLGIQNLNIELPDKSKDDINFLTSGILETTDVDEKYYISSHEEK 213 Query: 55 -----NKLWEGHQKRKENNKIAGKGFGYGLFFENSATT 87 ++ +G +++ I FG + + Sbjct: 214 VLICWDEFIKGIKEKVIGFPIWFDEFGKTYDYTDLGYA 251 >gi|282880843|ref|ZP_06289537.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS 5C-B1] gi|281305284|gb|EFA97350.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS 5C-B1] Length = 374 Score = 37.3 bits (85), Expect = 0.71, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 4/59 (6%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP-RLGDILEEHIDDKSTISNKLWE 59 KA ++GVPQ+R R+ I+ +F L + L L+ + + TI + +++ Sbjct: 177 KAEEYGVPQQRRRVIILGTK---FDFDLDRELKLMRESLPTELQSVFNRRETIRDAIFD 232 >gi|237716196|ref|ZP_04546677.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. D1] gi|262407805|ref|ZP_06084353.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 2_1_22] gi|294807624|ref|ZP_06766417.1| C-5 cytosine-specific DNA methylase [Bacteroides xylanisolvens SD CC 1b] gi|229443843|gb|EEO49634.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. D1] gi|262354613|gb|EEZ03705.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 2_1_22] gi|294445060|gb|EFG13734.1| C-5 cytosine-specific DNA methylase [Bacteroides xylanisolvens SD CC 1b] Length = 561 Score = 37.3 bits (85), Expect = 0.72, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 25/71 (35%), Gaps = 3/71 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G R+R + I F + FP P K D+ +K ++ + Sbjct: 178 LNAADYGAYTTRKRFFGI-FAKNGLPIVFPQPTHCKNGKQDMFGRL--EKWRPVKEILDF 234 Query: 61 HQKRKENNKIA 71 + + Sbjct: 235 SDEGTSIFREK 245 >gi|15239810|ref|NP_199727.1| MET1 (METHYLTRANSFERASE 1); methyltransferase [Arabidopsis thaliana] gi|462650|sp|P34881|DNMT1_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase 1; AltName: Full=DNA methyltransferase 01; AltName: Full=DNA methyltransferase 2; AltName: Full=DNA methyltransferase AthI; Short=DNA Metase AthI; Short=M.AthI; AltName: Full=DNA methyltransferase DDM2; AltName: Full=Protein DECREASED DNA METHYLATION 2 gi|304107|gb|AAA32829.1| cytosine-5 methyltransferase [Arabidopsis thaliana] gi|10177145|dbj|BAB10334.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana] gi|332008394|gb|AED95777.1| DNA (cytosine-5)-methyltransferase 1 [Arabidopsis thaliana] Length = 1534 Score = 37.3 bits (85), Expect = 0.73, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 18/34 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +GV Q R+R +I V ++P P+ Sbjct: 1271 LEAGAYGVSQSRKRAFIWAAAPEEVLPEWPEPMH 1304 >gi|317055417|ref|YP_004103884.1| DNA-cytosine methyltransferase [Ruminococcus albus 7] gi|315447686|gb|ADU21250.1| DNA-cytosine methyltransferase [Ruminococcus albus 7] Length = 543 Score = 37.3 bits (85), Expect = 0.73, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 4/52 (7%) Query: 1 MKACDFGVPQRRERLYIIDFL---NPSVEFKFPT-PLGIKPRLGDILEEHID 48 + A D+G PQ+R R I+ + F P + D + + D Sbjct: 319 LCAADYGAPQKRMRFVIMGIKSSISSIPTFPMPKFEEDEYRTVRDAISDIED 370 >gi|20094956|ref|NP_614803.1| site-specific DNA methylase [Methanopyrus kandleri AV19] gi|19888204|gb|AAM02733.1| Site-specific DNA methylase [Methanopyrus kandleri AV19] Length = 315 Score = 37.3 bits (85), Expect = 0.73, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 7/57 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPL-GIKPRLGDILEEHIDDKSTISNK 56 ++A +GVP R R++I + P P + D + + S + N Sbjct: 154 LQAVHYGVPSYRRRVFISNVRID------PEPTVERPKTVWDAIGDLPSPDSEVPNH 204 >gi|159481068|ref|XP_001698604.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas reinhardtii] gi|158282344|gb|EDP08097.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas reinhardtii] Length = 2204 Score = 37.3 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 16/37 (43%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 + A FGV Q R+R +I L + +P L Sbjct: 1904 LNAGCFGVSQSRKRTFIWAALPGELLPDWPAALHRFK 1940 >gi|38640332|ref|NP_944253.1| Bcep22gp25 [Burkholderia phage Bcep22] gi|33860399|gb|AAQ54959.1| Bcep22gp25 [Burkholderia phage Bcep22] Length = 205 Score = 37.3 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 14/26 (53%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A FGV QRR R++++ + Sbjct: 174 LDAQYFGVAQRRRRVFVVASGRDWFD 199 >gi|182438468|ref|YP_001826187.1| putative 5-methylcytosine methyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466984|dbj|BAG21504.1| putative 5-methylcytosine methyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 448 Score = 37.3 bits (85), Expect = 0.75, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 4/55 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV---EFKFPTPLGIKPRLG-DILEEHIDDKS 51 + DFGVPQ R R +I +P + +FP + R G + L D + Sbjct: 199 LHTEDFGVPQTRRRAVLIAQFDPENVHRKVRFPEATHQRYRKGAERLPPTHDHED 253 >gi|319654791|ref|ZP_08008867.1| hypothetical protein HMPREF1013_05489 [Bacillus sp. 2_A_57_CT2] gi|317393509|gb|EFV74271.1| hypothetical protein HMPREF1013_05489 [Bacillus sp. 2_A_57_CT2] Length = 325 Score = 37.3 bits (85), Expect = 0.75, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 7/98 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFP-TPLGIKPRLGDILEE-HIDDKSTISNK 56 ++A DFG R+R Y + F + + F FP P + +L D L+ + + K Sbjct: 126 LEAWDFGSLATRKRTYAVAFKDEKRFLSFDFPAAPKLRRKKLKDFLDRSSVQHEWKSVRK 185 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARY 94 + R+ + +++ + RY Sbjct: 186 FMDSFNSREAWKDRSLD---LTFVGKDAERIQCIPKRY 220 >gi|225435648|ref|XP_002283355.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 965 Score = 37.3 bits (85), Expect = 0.75, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 15/29 (51%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 +G+PQ R R+++ V ++P P Sbjct: 662 YGLPQFRMRVFMWGARFEEVLPQYPLPTH 690 >gi|300723947|ref|YP_003713260.1| hypothetical protein XNC1_3088 [Xenorhabdus nematophila ATCC 19061] gi|297630477|emb|CBJ91142.1| Dmt (fragment) [Xenorhabdus nematophila ATCC 19061] Length = 389 Score = 37.3 bits (85), Expect = 0.76, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 14/25 (56%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV 25 + A FGV QRR R++++ + Sbjct: 189 LDAQYFGVAQRRRRVFVVASARKNF 213 >gi|261414302|gb|ACX83569.1| DNA methyltransferase [Hieracium piloselloides] Length = 1547 Score = 37.3 bits (85), Expect = 0.76, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 18/34 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A FGV Q R+R +I + ++P P+ Sbjct: 1285 LEAGAFGVSQSRKRAFIWAASPEEILPEWPEPMH 1318 >gi|186682875|ref|YP_001866071.1| C-5 cytosine-specific DNA methylase [Nostoc punctiforme PCC 73102] gi|186465327|gb|ACC81128.1| C-5 cytosine-specific DNA methylase [Nostoc punctiforme PCC 73102] Length = 1180 Score = 37.3 bits (85), Expect = 0.76, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 7/93 (7%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHIDDKSTISNKLWEG 60 ++G+ Q R+RLY++ + + F P P + +++ + ID+ + W+ Sbjct: 144 NCRNWGIAQSRDRLYLLASKDGT--FADPVPPQISEVGWYEVIADLIDELPETTLAPWQL 201 Query: 61 HQKRKENNKIAG----KGFGYGLFFENSATTNT 89 + + + + SA +T Sbjct: 202 RKFPELAREANSCLIPDHSNWTNLIPQSAPCST 234 >gi|297792161|ref|XP_002863965.1| hypothetical protein ARALYDRAFT_331330 [Arabidopsis lyrata subsp. lyrata] gi|297309800|gb|EFH40224.1| hypothetical protein ARALYDRAFT_331330 [Arabidopsis lyrata subsp. lyrata] Length = 1532 Score = 37.3 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 18/34 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +GV Q R+R +I V ++P P+ Sbjct: 1269 LEAGAYGVSQSRKRAFIWAAAPEEVLPEWPEPMH 1302 >gi|294778769|ref|ZP_06744188.1| C-5 cytosine-specific DNA methylase [Bacteroides vulgatus PC510] gi|294447425|gb|EFG16006.1| C-5 cytosine-specific DNA methylase [Bacteroides vulgatus PC510] Length = 609 Score = 37.3 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 3/71 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFG R+R + I F ++ FP P K D+ +K + + Sbjct: 191 LNAADFGAYTTRKRFFGI-FAKKNLPIVFPEPTHCKGGRQDMFSRL--EKWKPVKDVLDF 247 Query: 61 HQKRKENNKIA 71 + + Sbjct: 248 SDEGTTIFREK 258 >gi|294637303|ref|ZP_06715601.1| DNA (cytosine-5-)-methyltransferase [Edwardsiella tarda ATCC 23685] gi|291089511|gb|EFE22072.1| DNA (cytosine-5-)-methyltransferase [Edwardsiella tarda ATCC 23685] Length = 722 Score = 37.3 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 15/26 (57%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A FGV QRR+R++++ + Sbjct: 174 LDAQFFGVAQRRKRVFVVASARKGFD 199 >gi|254804563|ref|YP_003082784.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] gi|254668105|emb|CBA04653.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] Length = 450 Score = 37.3 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A FG+PQ+R RLY++ + P I L D +ID S ++L Sbjct: 176 LDAKYFGLPQQRRRLYVVAGGKDT------NPENILLELHDHKNNNIDGVSFPKSELIFY 229 >gi|284159927|ref|YP_001060514.2| BsaWI methylase [Burkholderia pseudomallei 668] gi|283775103|gb|ABN83996.2| BsaWI methylase [Burkholderia pseudomallei 668] Length = 440 Score = 37.3 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 10/20 (50%), Positives = 13/20 (65%) Query: 3 ACDFGVPQRRERLYIIDFLN 22 A DFGVPQ R R+ I+ + Sbjct: 177 AVDFGVPQTRRRVAILAVRD 196 >gi|229101666|ref|ZP_04232385.1| Modification methylase Sau3AI [Bacillus cereus Rock3-28] gi|228681735|gb|EEL35893.1| Modification methylase Sau3AI [Bacillus cereus Rock3-28] Length = 427 Score = 37.3 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 15/24 (62%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS 24 + A D+G QRR R++I +L S Sbjct: 156 INAADYGNSQRRRRVFIFAYLRES 179 >gi|291525775|emb|CBK91362.1| DNA-methyltransferase (dcm) [Eubacterium rectale DSM 17629] Length = 510 Score = 37.3 bits (85), Expect = 0.78, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 21/81 (25%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A +GVPQRR R++++ +F G+IL E S+ +W Sbjct: 190 LDAQFWGVPQRRNRIFLVA------DF-------GGHSAGEILFE--------SDNVWRN 228 Query: 61 HQKRKENNKIAGKGFGYGLFF 81 +QK++E K F G Sbjct: 229 YQKKREERKGVACYFKTGTAD 249 >gi|323350984|ref|ZP_08086641.1| modification methylase HgiDII [Streptococcus sanguinis VMC66] gi|322122708|gb|EFX94417.1| modification methylase HgiDII [Streptococcus sanguinis VMC66] Length = 352 Score = 37.3 bits (85), Expect = 0.79, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTP-LGIKPRLGDILEEHID 48 A D+GVPQ+R+RL ++ + P P L D + + Sbjct: 153 APDYGVPQKRKRLLLLASKFGDISLLEPEFSPNNYPTLRDTIGNLPE 199 >gi|302419495|ref|XP_003007578.1| RIP defective [Verticillium albo-atrum VaMs.102] gi|261353229|gb|EEY15657.1| RIP defective [Verticillium albo-atrum VaMs.102] Length = 909 Score = 37.3 bits (85), Expect = 0.79, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 13/29 (44%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 +G+PQ R RL +I V +P Sbjct: 470 YGLPQHRRRLIMIGAGPGEVMPPWPAITH 498 >gi|225691144|gb|ACO06245.1| methylcytosine methyltransferase M.BbrII [Bifidobacterium breve UCC2003] Length = 349 Score = 37.3 bits (85), Expect = 0.79, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%) Query: 5 DFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID 48 D+G+PQRR RL ++ LN + + P P R + + D Sbjct: 156 DYGLPQRRRRLVLLAALNDHI--EMPEPTVGADRYRTVYDAIHD 197 >gi|296392544|ref|YP_003657428.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985] gi|296179691|gb|ADG96597.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985] Length = 314 Score = 37.3 bits (85), Expect = 0.80, Method: Composition-based stats. Identities = 13/23 (56%), Positives = 17/23 (73%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + A GVPQRR+RL+ I FL+P Sbjct: 152 LDASRCGVPQRRKRLFTIGFLHP 174 >gi|294644820|ref|ZP_06722563.1| C-5 cytosine-specific DNA methylase [Bacteroides ovatus SD CC 2a] gi|292639853|gb|EFF58128.1| C-5 cytosine-specific DNA methylase [Bacteroides ovatus SD CC 2a] Length = 487 Score = 37.3 bits (85), Expect = 0.80, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 25/71 (35%), Gaps = 3/71 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G R+R + I F + FP P K D+ +K ++ + Sbjct: 178 LNAADYGAYTTRKRFFGI-FAKNGLPIVFPQPTHCKNGKQDMFGRL--EKWRPVKEILDF 234 Query: 61 HQKRKENNKIA 71 + + Sbjct: 235 SDEGTSIFREK 245 >gi|261414304|gb|ACX83570.1| DNA methyltransferase [Hieracium pilosella] Length = 1569 Score = 37.3 bits (85), Expect = 0.80, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 18/34 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A FGV Q R+R +I + ++P P+ Sbjct: 1306 LEAGAFGVSQSRKRAFIWAASPEEILPEWPEPMH 1339 >gi|24416628|dbj|BAC22505.1| cytosine methyltransferase [Marchantia paleacea var. diptera] Length = 284 Score = 37.3 bits (85), Expect = 0.80, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 15/34 (44%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +FGV Q R+R +I +P Sbjct: 63 LQAGNFGVSQSRKRAFIWAAAPDESLPDWPEARH 96 >gi|313159497|gb|EFR58860.1| C-5 cytosine-specific DNA methylase [Alistipes sp. HGB5] Length = 545 Score = 37.3 bits (85), Expect = 0.81, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 18/59 (30%), Gaps = 1/59 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 + A DFG R R + I FP P K L K ++ + Sbjct: 144 LNAADFGAYTSRRRFFGIFARRGLP-IVFPKPTHTKNPAQGDLFGQQLRKWRPVREVLD 201 >gi|265756302|ref|ZP_06090631.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|263233893|gb|EEZ19502.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 589 Score = 37.3 bits (85), Expect = 0.81, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 3/71 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A DFG R+R + I F S+ FP P K D+ + +K ++ + Sbjct: 171 LNAADFGAYTTRKRFFGI-FAKKSLPIVFPEPTHCKGGRQDMFSKL--EKWKPVKEVLDF 227 Query: 61 HQKRKENNKIA 71 + + Sbjct: 228 SDEGTTIFREK 238 >gi|10257413|gb|AAG15406.1| cytosine-5 DNA methyltransferase MET1 [Zea mays] Length = 784 Score = 37.3 bits (85), Expect = 0.81, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 17/34 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A FGV Q R+R +I + +P P+ Sbjct: 518 LEAGAFGVAQSRKRAFIWAAAPGEMLPDWPEPMH 551 >gi|119773422|ref|YP_926162.1| modification methylase (cytosine-specific methyltransferase [Shewanella amazonensis SB2B] gi|119765922|gb|ABL98492.1| modification methylase (cytosine-specific methyltransferase [Shewanella amazonensis SB2B] Length = 520 Score = 37.3 bits (85), Expect = 0.81, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 15/26 (57%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 ++A D+G+PQ R R+ ++ E Sbjct: 240 IRAEDYGIPQARHRVILLGIKQSHFE 265 >gi|225026529|ref|ZP_03715721.1| hypothetical protein EUBHAL_00778 [Eubacterium hallii DSM 3353] gi|224956143|gb|EEG37352.1| hypothetical protein EUBHAL_00778 [Eubacterium hallii DSM 3353] Length = 461 Score = 36.9 bits (84), Expect = 0.82, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 5/57 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKL 57 + A ++G QRR R++I + N + K+ + R D LEE D K + Sbjct: 173 INAAEYGYQQRRRRIFIFAYKNDT---KYAERILKTIRYTDELEE--DKKIECMENV 224 >gi|219885163|gb|ACL52956.1| unknown [Zea mays] Length = 385 Score = 36.9 bits (84), Expect = 0.82, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 17/34 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A FGV Q R+R +I + +P P+ Sbjct: 119 LEAGAFGVAQSRKRAFIWAAAPGEMLPDWPEPMH 152 >gi|119512221|ref|ZP_01631310.1| hypothetical protein N9414_08959 [Nodularia spumigena CCY9414] gi|119463119|gb|EAW44067.1| hypothetical protein N9414_08959 [Nodularia spumigena CCY9414] Length = 393 Score = 36.9 bits (84), Expect = 0.83, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 30/122 (24%), Gaps = 30/122 (24%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFP---------TPLGIKPRLGDILEEHIDDKS 51 +++ +GVPQ R R I +P P+ + Sbjct: 208 LESAAYGVPQIRPRAIFIANRFGMPN-PYPKSQLTIEEYKPIESAISDLPEYTPIPEINH 266 Query: 52 TISNKLWEGHQKRKENN------KIAGKGFGYGLFFENSATT--------------NTLS 91 + E ++ + K F + S T +S Sbjct: 267 EWTKHSPEYMERLAQVPPGGSLYKKFVDAFKRQYTGKPSMTVKENHGGTHIHPYLNRVIS 326 Query: 92 AR 93 AR Sbjct: 327 AR 328 >gi|42779474|ref|NP_976721.1| DNA-cytosine methyltransferase [Bacillus cereus ATCC 10987] gi|42735390|gb|AAS39329.1| DNA-cytosine methyltransferase [Bacillus cereus ATCC 10987] Length = 719 Score = 36.9 bits (84), Expect = 0.83, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 14/19 (73%) Query: 1 MKACDFGVPQRRERLYIID 19 + A FGVPQRR R+Y++ Sbjct: 176 IDAQYFGVPQRRRRIYLVA 194 >gi|260221752|emb|CBA30630.1| hypothetical protein Csp_C24510 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 515 Score = 36.9 bits (84), Expect = 0.84, Method: Composition-based stats. Identities = 7/27 (25%), Positives = 12/27 (44%), Gaps = 1/27 (3%) Query: 6 FGVPQRRERLYIIDFLNP-SVEFKFPT 31 +G+PQ R R+ ++ FP Sbjct: 244 YGIPQARHRVILLGIRKDVLKGKIFPK 270 >gi|225463167|ref|XP_002267200.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1549 Score = 36.9 bits (84), Expect = 0.84, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 17/34 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +GV Q R+R +I ++P P+ Sbjct: 1289 LEAGAYGVSQSRKRAFIWAASPEETLPEWPEPMH 1322 >gi|144575112|gb|AAZ43851.2| putative cytosine-specific methyltransferase [Mycoplasma synoviae 53] Length = 416 Score = 36.9 bits (84), Expect = 0.84, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 39/106 (36%), Gaps = 15/106 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-------SVEFKF-------PTPLGIKPRLGDILEEH 46 + A D G Q+RER++ I L V+FK L + + + Sbjct: 217 LNARDHGSLQKRERVFAISVLKKTKVPFKNDVDFKKYINNIGQKRILENNKKEFFAIFDL 276 Query: 47 IDDKSTISNK-LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + K ++K L + R++ + +N+ NTL+ Sbjct: 277 KNKKYLEADKCLIKDTPSRRKIIEKCKNISDINKSIKNNFVINTLT 322 >gi|304399150|ref|ZP_07381018.1| DNA adenine methylase [Pantoea sp. aB] gi|304353390|gb|EFM17769.1| DNA adenine methylase [Pantoea sp. aB] Length = 808 Score = 36.9 bits (84), Expect = 0.85, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 15/26 (57%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A FGV QRR R++++ V+ Sbjct: 196 LDAQYFGVAQRRRRVFVVASARNDVD 221 >gi|297746421|emb|CBI16477.3| unnamed protein product [Vitis vinifera] Length = 821 Score = 36.9 bits (84), Expect = 0.85, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 15/29 (51%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 +G+PQ R R+++ V ++P P Sbjct: 518 YGLPQFRMRVFMWGARFEEVLPQYPLPTH 546 >gi|162463699|ref|NP_001105186.1| DNA methyl transferase1 [Zea mays] gi|20977598|gb|AAM28226.1| DNA methyltransferase 101 [Zea mays] Length = 1457 Score = 36.9 bits (84), Expect = 0.85, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 17/34 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A FGV Q R+R +I + +P P+ Sbjct: 1191 LEAGAFGVAQSRKRAFIWAAAPGEMLPDWPEPMH 1224 >gi|205374924|ref|ZP_03227716.1| DNA-cytosine methyltransferase [Bacillus coahuilensis m4-4] Length = 323 Score = 36.9 bits (84), Expect = 0.87, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 12/90 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A GVPQ+R+R ++ L + P I ++ + + + L G Sbjct: 140 LDASLCGVPQKRKRFFLFGELGGKDDAFIPFIEEK------ISKKPMTPREYFGDSL--G 191 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTL 90 + + + + F + T+ Sbjct: 192 LEHYYRHPR----NYNRRGIFSIDEPSPTI 217 >gi|125718611|ref|YP_001035744.1| modification methylase [Streptococcus sanguinis SK36] gi|125498528|gb|ABN45194.1| Modification methylase, putative [Streptococcus sanguinis SK36] Length = 408 Score = 36.9 bits (84), Expect = 0.87, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 16/24 (66%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS 24 + A +FGVPQ R+R +++ L + Sbjct: 209 LDARNFGVPQARKRTFMLSVLAEN 232 >gi|188588765|ref|YP_001921868.1| DNA-cytosine methyltransferase [Clostridium botulinum E3 str. Alaska E43] gi|188499046|gb|ACD52182.1| DNA-cytosine methyltransferase [Clostridium botulinum E3 str. Alaska E43] Length = 304 Score = 36.9 bits (84), Expect = 0.88, Method: Composition-based stats. Identities = 7/26 (26%), Positives = 13/26 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A + VPQ R+R +++ L Sbjct: 143 LDASLYEVPQARKRYFLVGELKGKDN 168 >gi|197124333|ref|YP_002136284.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K] gi|196174182|gb|ACG75155.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K] Length = 657 Score = 36.9 bits (84), Expect = 0.89, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 12/19 (63%) Query: 1 MKACDFGVPQRRERLYIID 19 + A FGVPQ R R +++ Sbjct: 425 LNATTFGVPQDRTRCFLVA 443 >gi|302918673|ref|XP_003052704.1| hypothetical protein NECHADRAFT_35564 [Nectria haematococca mpVI 77-13-4] gi|256733644|gb|EEU46991.1| hypothetical protein NECHADRAFT_35564 [Nectria haematococca mpVI 77-13-4] Length = 614 Score = 36.9 bits (84), Expect = 0.90, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 24/104 (23%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLG-------IKPRLGDILEEHIDDKSTISNKLW 58 +G Q R+RL +I FP P +G + Sbjct: 401 WGAAQDRKRLILIAAAPGERLPPFPQPTHGPEAGLLPYNSIGKAIRGIRPGDDLHDLDNV 460 Query: 59 EGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR----YYKDG 98 + +Q R+ ++ + T++ R YY DG Sbjct: 461 KYYQPRRAP-------------YDANRLAGTITTRGGDFYYPDG 491 >gi|2895089|gb|AAC39356.1| Met2-type cytosine DNA-methyltransferase [Daucus carota] Length = 1761 Score = 36.9 bits (84), Expect = 0.90, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Query: 1 MKACDFGVPQRRERLYI-IDFLNPSVEFKFPTPLG 34 ++A FGVPQ R+R +I ++ +P P+ Sbjct: 1501 LEAGAFGVPQSRKRAFIWAASPEETLPGSWPEPMH 1535 >gi|291519163|emb|CBK74384.1| DNA-methyltransferase (dcm) [Butyrivibrio fibrisolvens 16/4] Length = 406 Score = 36.9 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 13/24 (54%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV 25 A +G QRR R +I + N +V Sbjct: 165 NAATYGAAQRRRRTFIFAYRNDTV 188 >gi|296084836|emb|CBI27718.3| unnamed protein product [Vitis vinifera] Length = 1429 Score = 36.9 bits (84), Expect = 0.92, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 17/34 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +GV Q R+R +I ++P P+ Sbjct: 1169 LEAGAYGVSQSRKRAFIWAASPEETLPEWPEPMH 1202 >gi|242043138|ref|XP_002459440.1| hypothetical protein SORBIDRAFT_02g004680 [Sorghum bicolor] gi|241922817|gb|EER95961.1| hypothetical protein SORBIDRAFT_02g004680 [Sorghum bicolor] Length = 1397 Score = 36.9 bits (84), Expect = 0.92, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 17/34 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A FGV Q R+R +I + +P P+ Sbjct: 1130 LEAGAFGVAQSRKRAFIWAAAPGEMLPDWPEPMH 1163 >gi|210632067|ref|ZP_03297189.1| hypothetical protein COLSTE_01082 [Collinsella stercoris DSM 13279] gi|210159724|gb|EEA90695.1| hypothetical protein COLSTE_01082 [Collinsella stercoris DSM 13279] Length = 392 Score = 36.9 bits (84), Expect = 0.92, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 16/92 (17%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWE- 59 + A GVPQ R+R + I L F +L + D + TI + L + Sbjct: 143 LTASFCGVPQSRKRFFCIGALGEPDGFL----------DSRLLGKLSDREMTIRDYLGDE 192 Query: 60 -GHQKRKENNKIAGKGFGYGLFFENSATTNTL 90 G + + + + + T+ Sbjct: 193 LGTEYYYRHPR----NYSRRAIYSIDEPAPTM 220 >gi|3132825|gb|AAC16389.1| putative cytosine-5 DNA methyltransferase [Zea mays] Length = 1525 Score = 36.9 bits (84), Expect = 0.93, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 17/34 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A FGV Q R+R +I + +P P+ Sbjct: 1259 LEAGAFGVAQSRKRAFIWAAAPGEMLPDWPEPMH 1292 >gi|324323924|gb|ADY24967.1| modification methylase SPRI [Bacillus thuringiensis serovar finitimus YBT-020] Length = 290 Score = 36.9 bits (84), Expect = 0.94, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 3/27 (11%) Query: 1 MKACDFG---VPQRRERLYIIDFLNPS 24 + + D G VPQ R R++I+ L + Sbjct: 150 LNSKDIGERPVPQSRLRVFIVGHLRGT 176 >gi|291515626|emb|CBK64836.1| DNA-methyltransferase (dcm) [Alistipes shahii WAL 8301] Length = 360 Score = 36.9 bits (84), Expect = 0.94, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 5 DFGVPQRRERLYIIDFLNPSVEFKFPT-PLGIKPRLGDILEEHIDDKSTISNK 56 D+G+PQ R+RL ++ ++E PT + + + + + K+ ++K Sbjct: 166 DYGIPQTRKRLVLLASRLGNIELINPTHKPNEYKTVKETIGDLPELKAGETDK 218 >gi|254524071|ref|ZP_05136126.1| C-5 cytosine-specific DNA methylase [Stenotrophomonas sp. SKA14] gi|219721662|gb|EED40187.1| C-5 cytosine-specific DNA methylase [Stenotrophomonas sp. SKA14] Length = 586 Score = 36.9 bits (84), Expect = 0.94, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 15/40 (37%), Gaps = 1/40 (2%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDIL 43 D+G P R R ++I + +P + D+ Sbjct: 137 ADYGDPTTRRRFFLIG-RSDGKRLTWPEFTHDRVGGTDLF 175 >gi|121593710|ref|YP_985606.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42] gi|121593834|ref|YP_985730.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42] gi|120605790|gb|ABM41530.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42] gi|120605914|gb|ABM41654.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42] Length = 539 Score = 36.9 bits (84), Expect = 0.94, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 14/19 (73%) Query: 1 MKACDFGVPQRRERLYIID 19 + A FGV QRR+R++++ Sbjct: 190 LDAQYFGVAQRRKRVFLVA 208 >gi|78047961|ref|YP_364136.1| DNA methyltransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036391|emb|CAJ24082.1| DNA methyltransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 538 Score = 36.9 bits (84), Expect = 0.94, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 14/19 (73%) Query: 1 MKACDFGVPQRRERLYIID 19 + A FGV QRR+R++++ Sbjct: 190 LDAQYFGVAQRRKRVFLVA 208 >gi|166363188|ref|YP_001655461.1| cytosine-specific DNA methylase [Microcystis aeruginosa NIES-843] gi|166085561|dbj|BAG00269.1| cytosine-specific DNA methylase [Microcystis aeruginosa NIES-843] Length = 387 Score = 36.9 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 +++ +GVPQ R R I +P+P + + I Sbjct: 207 LESAAYGVPQIRPRAIFIANRFGLPN-PYPSPQLVPEKYQPI 247 >gi|262201418|ref|YP_003272626.1| DNA-cytosine methyltransferase [Gordonia bronchialis DSM 43247] gi|262084765|gb|ACY20733.1| DNA-cytosine methyltransferase [Gordonia bronchialis DSM 43247] Length = 342 Score = 36.9 bits (84), Expect = 0.96, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 2/34 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +FGVPQ R RL ++ + P P Sbjct: 154 LRALEFGVPQERRRLVVLASRIGEP--RMPRPTH 185 >gi|313625252|gb|EFR95088.1| modification methylase Sau3AI [Listeria innocua FSL J1-023] Length = 227 Score = 36.9 bits (84), Expect = 0.98, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A ++G QRR R++ + N + K+ + K + E ++D SN+ + Sbjct: 168 INAAEYGRAQRRRRVFFFVYRNDT---KWAKKIDEKYENDKLEEGLLEDVVIASNRYDDY 224 Query: 61 H 61 Sbjct: 225 I 225 >gi|302343998|ref|YP_003808527.1| DNA-cytosine methyltransferase [Desulfarculus baarsii DSM 2075] gi|301640611|gb|ADK85933.1| DNA-cytosine methyltransferase [Desulfarculus baarsii DSM 2075] Length = 371 Score = 36.9 bits (84), Expect = 0.99, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 18/38 (47%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL 39 ++GVPQ+R RL ++ + P G +PR Sbjct: 162 NCAEYGVPQQRNRLVLLASKFGPISLLTPEQFGQRPRT 199 >gi|284052894|ref|ZP_06383104.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca] gi|79835469|gb|ABB52095.1| Mod [Arthrospira platensis] gi|291565921|dbj|BAI88193.1| type II DNA modification methyltransferase [Arthrospira platensis NIES-39] Length = 314 Score = 36.9 bits (84), Expect = 0.99, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 28/100 (28%), Gaps = 13/100 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE----FKFPTPLGIKPRLGDILEEHIDDKSTISNK 56 + A GVPQ R+R ++I L + F + D L + Sbjct: 141 LDASYCGVPQARKRYFLIGELEGKDNALEPYLFKNYASKPMTVFDYLGLSLG-------- 192 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 E + + + G Y + Y K Sbjct: 193 -IEYFYRHPRSYQRRGIFSIYEPSPTVRGVNRPIPKTYQK 231 >gi|220909632|ref|YP_002484943.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7425] gi|219866243|gb|ACL46582.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7425] Length = 359 Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 19/47 (40%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDK 50 +G+PQRR+R I+ + V + K + D + K Sbjct: 157 SKYGLPQRRDRALILAWRKGKVNSFQLEAVQRKFTVRDTISHLPPLK 203 >gi|110005053|emb|CAK99384.1| hypothetical c-5 cytosine-specific dna methyltransferase protein [Spiroplasma citri] Length = 357 Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 24/76 (31%), Gaps = 4/76 (5%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFK---FPTPLG-IKPRLGDILEEHIDDKSTISNKL 57 D+G PQRR+RL I + P + + D++ S+ Sbjct: 158 NIADYGAPQRRKRLLFIAVSKDIPNAENIMIPKKINAKSKNVFDVIGHLPIISDGSSDIK 217 Query: 58 WEGHQKRKENNKIAGK 73 H K + + Sbjct: 218 DPLHTSAKLSELNKKR 233 >gi|71909137|ref|YP_286724.1| C-5 cytosine-specific DNA methylase [Dechloromonas aromatica RCB] gi|71848758|gb|AAZ48254.1| C-5 cytosine-specific DNA methylase [Dechloromonas aromatica RCB] Length = 571 Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 35/112 (31%), Gaps = 26/112 (23%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEF----KFPTPLGIKP-----------RLGDILEEH 46 C++GVPQRR+R I+ + +F + + + D + Sbjct: 178 DTCEWGVPQRRQR-CIVG----NFDFGLLQSYKEHTKPRTLGDVVSVLSQATITDPIYGI 232 Query: 47 IDDKSTISNKLWEGHQKRKENNKIAGKG------FGYGLFFENSATTNTLSA 92 + +++ + E +E + T T++A Sbjct: 233 EVAREELTDHVIEEFLSAEEERMNREMKTYHPVYNNMAFPDPLNRTARTITA 284 >gi|78047901|ref|YP_364076.1| putative cytosine-specific DNA methylase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036331|emb|CAJ24022.1| putative cytosine-specific DNA methylase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 333 Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 1/25 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV 25 + A F +PQ R RL+II S Sbjct: 149 INAVHF-LPQSRPRLFIIGVRKSSP 172 >gi|189423373|ref|YP_001950550.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ] gi|189419632|gb|ACD94030.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ] Length = 375 Score = 36.9 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 2/32 (6%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 A D+G PQ R R ++ + + P P Sbjct: 173 AQDYGAPQLRRRFVLLASRHGEI--SIPEPTH 202 >gi|254787981|ref|YP_003075410.1| DNA-methyltransferase [Teredinibacter turnerae T7901] gi|237687098|gb|ACR14362.1| DNA-methyltransferase [Teredinibacter turnerae T7901] Length = 380 Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 11/21 (52%) Query: 2 KACDFGVPQRRERLYIIDFLN 22 A +FGVPQ RER+ Sbjct: 167 NALEFGVPQDRERVLFFGIKR 187 >gi|70731152|ref|YP_260893.1| DNA-cytosine methyltransferase [Pseudomonas fluorescens Pf-5] gi|68345451|gb|AAY93057.1| DNA-cytosine methyltransferase [Pseudomonas fluorescens Pf-5] Length = 551 Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 7/26 (26%), Positives = 14/26 (53%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A FG+ QRR R++++ + Sbjct: 176 LDAQYFGLAQRRRRVFVVASARDGFD 201 >gi|67924199|ref|ZP_00517640.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] gi|67853953|gb|EAM49271.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] Length = 358 Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 7/72 (9%) Query: 8 VPQRRERLYIIDFLNP-SVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQKRKE 66 VPQ+R+RL II S+ FP L D L K+ ++ E ++++K Sbjct: 222 VPQKRDRLIIIACRQDLSIIPIFPIKNNYTISLKDAL------KNCPTSPGVEYNERKKA 275 Query: 67 NNKIAGKGFGYG 78 + G + Sbjct: 276 IMSLVIPGGNWR 287 >gi|255692343|ref|ZP_05416018.1| DNA (cytosine-5-)-methyltransferase [Bacteroides finegoldii DSM 17565] gi|260621969|gb|EEX44840.1| DNA (cytosine-5-)-methyltransferase [Bacteroides finegoldii DSM 17565] Length = 297 Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 4/34 (11%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE---FKFPTP 32 F +PQ RER+Y++ + F FP P Sbjct: 146 NTAWF-LPQNRERIYLVGRVADRCTGDVFPFPAP 178 >gi|153870382|ref|ZP_01999795.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS] gi|152073154|gb|EDN70207.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS] Length = 349 Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP-RLGDILEEHIDDKSTISNKLWE 59 + A D+G+PQ+R+RL ++ ++ PT + D + + KS S+ Sbjct: 147 IYAPDYGIPQKRKRLVLLASKFGNISLLPPTHTPENYLTVQDAIGQLDKIKSGESSPNDF 206 Query: 60 GHQKRKENNKI 70 H+ K ++K Sbjct: 207 FHKASKLSDKN 217 >gi|71894454|ref|YP_278562.1| putative cytosine-specific methyltransferase [Mycoplasma synoviae 53] Length = 290 Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 37/106 (34%), Gaps = 15/106 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-----SVEFKFPT---------PLGIKPRLGDILEEH 46 + A D G Q+RER++ I L + F L + + + Sbjct: 91 LNARDHGSLQKRERVFAISVLKKTKVPFKNDVDFKKYINNIGQKRILENNKKEFFAIFDL 150 Query: 47 IDDKSTISNK-LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + K ++K L + R++ + +N+ NTL+ Sbjct: 151 KNKKYLEADKCLIKDTPSRRKIIEKCKNISDINKSIKNNFVINTLT 196 >gi|303274394|ref|XP_003056518.1| predicted protein [Micromonas pusilla CCMP1545] gi|226462602|gb|EEH59894.1| predicted protein [Micromonas pusilla CCMP1545] Length = 438 Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 14/20 (70%) Query: 6 FGVPQRRERLYIIDFLNPSV 25 FG+PQRR R++I+ L+ Sbjct: 79 FGLPQRRRRVFIVASLHGDP 98 >gi|161870058|ref|YP_001599227.1| modification methylase (cytosine-specific DNA methylase) [Neisseria meningitidis 053442] gi|161595611|gb|ABX73271.1| modification methylase (cytosine-specific DNA methylase) [Neisseria meningitidis 053442] Length = 340 Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 9/45 (20%), Positives = 17/45 (37%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID 48 D+GVPQ R R ++ +++ PT + + Sbjct: 152 ADYGVPQSRRRHVLLASRIGNIQMVPPTHSNCHVTVRQAIGHLPP 196 >gi|332652901|ref|ZP_08418646.1| DNA (cytosine-5-)-methyltransferase [Ruminococcaceae bacterium D16] gi|332518047|gb|EGJ47650.1| DNA (cytosine-5-)-methyltransferase [Ruminococcaceae bacterium D16] Length = 542 Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 12/22 (54%) Query: 1 MKACDFGVPQRRERLYIIDFLN 22 + A D+G PQ+R R +I Sbjct: 319 LCAADYGAPQKRMRFVVIGIKK 340 >gi|315054007|ref|XP_003176378.1| hypothetical protein MGYG_00467 [Arthroderma gypseum CBS 118893] gi|311338224|gb|EFQ97426.1| hypothetical protein MGYG_00467 [Arthroderma gypseum CBS 118893] Length = 1091 Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 1/61 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPR-LGDILEEHIDDKSTISNKLWE 59 + A +FG PQ R RL+I + P P + ST + W+ Sbjct: 793 LDAWNFGAPQSRSRLFIAVTAPGLHIIEHPPLTHSHPPGTKSRTLGDNPNGSTFGERRWD 852 Query: 60 G 60 Sbjct: 853 T 853 >gi|15600968|ref|NP_232598.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae O1 biovar eltor str. N16961] gi|121586752|ref|ZP_01676535.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae 2740-80] gi|121727743|ref|ZP_01680831.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae V52] gi|147671623|ref|YP_001215865.1| putative site-specific DNA-methyltransferase [Vibrio cholerae O395] gi|153816788|ref|ZP_01969455.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae NCTC 8457] gi|153823195|ref|ZP_01975862.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae B33] gi|227811822|ref|YP_002811832.1| putative site-specific DNA-methyltransferase [Vibrio cholerae M66-2] gi|254850603|ref|ZP_05239953.1| cytosine-specific DNA methyltransferase [Vibrio cholerae MO10] gi|255745992|ref|ZP_05419939.1| site-specific DNA-methyltransferase putative [Vibrio cholera CIRS 101] gi|262162170|ref|ZP_06031185.1| site-specific DNA-methyltransferase putative [Vibrio cholerae INDRE 91/1] gi|262167363|ref|ZP_06035072.1| site-specific DNA-methyltransferase putative [Vibrio cholerae RC27] gi|298500051|ref|ZP_07009857.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9657591|gb|AAF96111.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|114326101|gb|ABI64146.1| cytosine-specific DNA methyltransferase [Vibrio cholerae O395] gi|121549049|gb|EAX59086.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae 2740-80] gi|121629960|gb|EAX62370.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae V52] gi|126512591|gb|EAZ75185.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae NCTC 8457] gi|126519283|gb|EAZ76506.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae B33] gi|146314006|gb|ABQ18546.1| putative site-specific DNA-methyltransferase [Vibrio cholerae O395] gi|227010964|gb|ACP07175.1| putative site-specific DNA-methyltransferase [Vibrio cholerae M66-2] gi|227014870|gb|ACP11079.1| putative site-specific DNA-methyltransferase [Vibrio cholerae O395] gi|254846308|gb|EET24722.1| cytosine-specific DNA methyltransferase [Vibrio cholerae MO10] gi|255735746|gb|EET91144.1| site-specific DNA-methyltransferase putative [Vibrio cholera CIRS 101] gi|262024247|gb|EEY42939.1| site-specific DNA-methyltransferase putative [Vibrio cholerae RC27] gi|262028245|gb|EEY46903.1| site-specific DNA-methyltransferase putative [Vibrio cholerae INDRE 91/1] gi|297542032|gb|EFH78083.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 383 Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 25/79 (31%), Gaps = 14/79 (17%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV-----------EFKFPTPLGIKPR---LGDILEEHI 47 + +FGVPQ R+R+ + V +F + + I E Sbjct: 181 NSIEFGVPQDRDRILMFGIHRKHVGDKLTSIELARDFDWEREVKFDKTKVLDKSIWPELA 240 Query: 48 DDKSTISNKLWEGHQKRKE 66 K KL + +E Sbjct: 241 TYKENSIRKLPKHLDNYRE 259 >gi|109638476|ref|YP_656741.1| ORF86 [Ranid herpesvirus 1] gi|4219046|gb|AAD12284.1| ORF86 [Ranid herpesvirus 1] Length = 739 Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 15/21 (71%) Query: 1 MKACDFGVPQRRERLYIIDFL 21 ++A +GVPQ R+R+ ++ L Sbjct: 433 LQAGHYGVPQTRQRVIVVATL 453 >gi|330723388|gb|AEC45758.1| DNA-cytosine methyltransferase family protein [Mycoplasma hyorhinis MCLD] Length = 407 Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 35/101 (34%), Gaps = 14/101 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G QRR+R++I + + + +IL I D S L E Sbjct: 162 IDASDYGFVQRRKRVFIFAYKKELT-----QIINKEQNQENIL---IKDGFFASEFLVES 213 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 K K + +N S +Y GS I Sbjct: 214 ------QCKKTNKSDILKNYSNLVDVSNNFSFSFYNSGSMI 248 >gi|284053792|ref|ZP_06384002.1| cytosine-specific DNA methylase [Arthrospira platensis str. Paraca] gi|291570060|dbj|BAI92332.1| type II DNA modification methyltransferase [Arthrospira platensis NIES-39] Length = 418 Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 23/80 (28%), Gaps = 5/80 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP---LGIKPRLGDILEEHIDDKSTIS-NK 56 +++ +GVPQ R R I +P P + + + + S N Sbjct: 224 LESAAYGVPQIRPRAIFIANRFGMKN-PYPYPQLVPEEYQTIESAISDLPAYQPIPSINH 282 Query: 57 LWEGHQKRKENNKIAGKGFG 76 W H G Sbjct: 283 EWTRHSPEYMERISKVPPGG 302 >gi|328947445|ref|YP_004364782.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] gi|328447769|gb|AEB13485.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] Length = 445 Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 31/97 (31%), Gaps = 15/97 (15%) Query: 1 MKACDFGVPQRRERLYIID-----------FLNPSVEF----KFPTPLGIKPRLGDILEE 45 + A FG+PQ+R RLY++ F F K+P ++ E Sbjct: 175 LDAKYFGLPQQRRRLYVVAGGKDFSPENILFEKHERNFGELKKYPLIFEKDGHSYEVFRE 234 Query: 46 HIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFE 82 + D + W G+ + + F Sbjct: 235 YTDCLYSAYGTKWNGNAAAYNGSLFVVQDGRLRRFTP 271 >gi|254488706|ref|ZP_05101911.1| C-5 cytosine-specific DNA methylase [Roseobacter sp. GAI101] gi|214045575|gb|EEB86213.1| C-5 cytosine-specific DNA methylase [Roseobacter sp. GAI101] Length = 384 Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 21/63 (33%), Gaps = 3/63 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLN--PSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + A F +PQ R RL++I N P P + + SN LW Sbjct: 156 IDARRF-LPQSRPRLFVICVRNDVDIAGLTDPKPSHAFHGKKLQKFLGVATRPVRSNWLW 214 Query: 59 EGH 61 Sbjct: 215 WKL 217 >gi|229506637|ref|ZP_04396146.1| hypothetical protein VCF_001859 [Vibrio cholerae BX 330286] gi|229510565|ref|ZP_04400045.1| hypothetical protein VCE_001973 [Vibrio cholerae B33] gi|229517303|ref|ZP_04406748.1| hypothetical protein VCC_001324 [Vibrio cholerae RC9] gi|229605114|ref|YP_002875818.1| hypothetical protein VCD_000052 [Vibrio cholerae MJ-1236] gi|229345339|gb|EEO10312.1| hypothetical protein VCC_001324 [Vibrio cholerae RC9] gi|229353010|gb|EEO17950.1| hypothetical protein VCE_001973 [Vibrio cholerae B33] gi|229356988|gb|EEO21906.1| hypothetical protein VCF_001859 [Vibrio cholerae BX 330286] gi|229371600|gb|ACQ62022.1| hypothetical protein VCD_000052 [Vibrio cholerae MJ-1236] Length = 323 Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 25/79 (31%), Gaps = 14/79 (17%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV-----------EFKFPTPLGIKPR---LGDILEEHI 47 + +FGVPQ R+R+ + V +F + + I E Sbjct: 121 NSIEFGVPQDRDRILMFGIHRKHVGDKLTSIELARDFDWEREVKFDKTKVLDKSIWPELA 180 Query: 48 DDKSTISNKLWEGHQKRKE 66 K KL + +E Sbjct: 181 TYKENSIRKLPKHLDNYRE 199 >gi|213053466|ref|ZP_03346344.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 320 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 3/45 (6%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLGDILEEHIDD 49 +PQ RER+ ++ F +F P L E ++ Sbjct: 276 LPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEP 320 >gi|255573870|ref|XP_002527854.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis] gi|223532778|gb|EEF34557.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis] Length = 1584 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 18/34 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A FG+ Q R+R +I + ++P P+ Sbjct: 1302 LEAGAFGISQSRKRAFIWAASPEEILPEWPEPMH 1335 >gi|210134686|ref|YP_002301125.1| type II R-M system methyltransferase [Helicobacter pylori P12] gi|210132654|gb|ACJ07645.1| type II R-M system methyltransferase [Helicobacter pylori P12] Length = 160 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 8/16 (50%), Positives = 12/16 (75%) Query: 1 MKACDFGVPQRRERLY 16 + A D+GVPQ RE ++ Sbjct: 145 LNALDYGVPQIREEVF 160 >gi|108562885|ref|YP_627201.1| type II DNA modification enzyme [Helicobacter pylori HPAG1] gi|107836658|gb|ABF84527.1| type II DNA modification enzyme [Helicobacter pylori HPAG1] Length = 160 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 8/16 (50%), Positives = 12/16 (75%) Query: 1 MKACDFGVPQRRERLY 16 + A D+GVPQ RE ++ Sbjct: 145 LNALDYGVPQIREEVF 160 >gi|15966901|ref|NP_387254.1| putative cytosine-specific methyltransferase protein [Sinorhizobium meliloti 1021] gi|15076174|emb|CAC47727.1| Putative cytosine-specific methyltransferase [Sinorhizobium meliloti 1021] Length = 440 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 13/26 (50%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEF 27 + FGVPQ+R RL I ++ Sbjct: 182 DSASFGVPQKRSRLIAIGVSKDLCKW 207 >gi|294782269|ref|ZP_06747595.1| modification methylase Sau3AI [Fusobacterium sp. 1_1_41FAA] gi|294480910|gb|EFG28685.1| modification methylase Sau3AI [Fusobacterium sp. 1_1_41FAA] Length = 423 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 16/29 (55%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF 29 + A ++ +PQ+R+R++I KF Sbjct: 169 INAGEYSMPQKRKRVFIFAHKKNLNYSKF 197 >gi|127440|sp|P24600|MTD1_HERAU RecName: Full=Modification methylase HgiDI; Short=M.HgiDI; AltName: Full=Cytosine-specific methyltransferase HgiDI gi|43482|emb|CAA38938.1| methyltransferase [Herpetosiphon aurantiacus] Length = 309 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 15/25 (60%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV 25 + A GVPQ R+R ++I + S+ Sbjct: 142 LDASLCGVPQLRKRTFVIGHRHGSI 166 >gi|109638623|ref|YP_656628.1| DNA (cytosine-5-)-methyltransferase [Ranid herpesvirus 2] gi|109138110|gb|ABG25588.1| ORF120 [Ranid herpesvirus 2] Length = 861 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 5/32 (15%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 +G+PQ R RL I+ + FP P + P Sbjct: 587 YGLPQSRRRLLIVAARDD-----FPLPDMLPP 613 >gi|294664029|ref|ZP_06729437.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292606198|gb|EFF49441.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 370 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 2/43 (4%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILE 44 KA ++GV Q RER+ I+ P D+L Sbjct: 184 KAVEYGVAQARERVVILGSKASRP--IAPPITHSADSTLDLLP 224 >gi|325495666|gb|EGC93530.1| putative DNA methyltransferase [Escherichia fergusonii ECD227] Length = 1013 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 5/34 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-----FKF 29 + A FGV QRR R++++ ++ F+F Sbjct: 539 LDAQYFGVAQRRRRVFVVASARTDLDPATVLFEF 572 >gi|312964273|ref|ZP_07778577.1| DNA adenine methylase family protein [Escherichia coli 2362-75] gi|312290986|gb|EFR18860.1| DNA adenine methylase family protein [Escherichia coli 2362-75] Length = 672 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 5/34 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-----FKF 29 + A FGV QRR R++++ ++ F+F Sbjct: 198 LDAQYFGVAQRRRRVFVVASARTDLDPATVLFEF 231 >gi|260871192|ref|YP_003237972.1| putative DNA methyltransferase [Escherichia coli O111:H- str. 11128] gi|257767771|dbj|BAI39264.1| probable DNA methyltransferase [Escherichia coli O111:H- str. 11128] Length = 1013 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 5/34 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-----FKF 29 + A FGV QRR R++++ ++ F+F Sbjct: 539 LDAQYFGVAQRRRRVFVVASARTDLDPATVLFEF 572 >gi|33323568|gb|AAQ07538.1|AF503408_62 Dam [Enterobacteria phage P7] Length = 672 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 5/34 (14%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-----FKF 29 + A FGV QRR R++++ ++ F+F Sbjct: 198 LDAQYFGVAQRRRRVFVVASARTDLDPATVLFEF 231 >gi|37039880|gb|AAM96952.1| DNA cytosine-5-methyltransferase [Prunus persica] Length = 1564 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 18/34 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +G+ Q R+R +I V ++P P+ Sbjct: 1302 LEAGAYGISQSRKRAFIWAAAPEEVLPEWPEPMH 1335 >gi|332367371|gb|EGJ45104.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis SK1059] Length = 329 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 14/28 (50%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKFPT 31 DFG+PQ R+R + N + E F Sbjct: 181 SDFGIPQNRKRFILFASKNETYEIFFEE 208 >gi|317401187|gb|EFV81833.1| hypothetical protein HMPREF0005_01193 [Achromobacter xylosoxidans C54] Length = 571 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 10/88 (11%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID--------DKSTIS 54 A FGVPQ+R R II F P G+ L+ + + Sbjct: 200 AWRFGVPQKRIRQLIIGTRRELPLFI-PDRYIRPTHGGEGLQPLVSLGEAIGDLPEICAG 258 Query: 55 NKLWEGHQKRKENNKIAGKGFGYGLFFE 82 ++ E + +G ++ Sbjct: 259 DERHERLYDSALRQAH-IQKYGTRYIYD 285 >gi|254452152|ref|ZP_05065589.1| DNA-cytosine methyltransferase [Octadecabacter antarcticus 238] gi|198266558|gb|EDY90828.1| DNA-cytosine methyltransferase [Octadecabacter antarcticus 238] Length = 488 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 16/22 (72%) Query: 1 MKACDFGVPQRRERLYIIDFLN 22 ++A ++G+PQRR R+ I+ L Sbjct: 228 IRAEEYGIPQRRHRVIIMGVLE 249 >gi|167744430|ref|ZP_02417204.1| hypothetical protein Bpse14_40548 [Burkholderia pseudomallei 14] Length = 349 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPT--PLGIKPRLGDIL 43 A D+GVPQRR+RL + + P P+ + + D + Sbjct: 160 DAADYGVPQRRKRLLVKASRFGKI----PDAHPVKERRTVKDAI 199 >gi|15676623|ref|NP_273767.1| modification methylase HgaI-1 [Neisseria meningitidis MC58] gi|5578896|emb|CAB51245.1| m5C-methyltransferase [Neisseria meningitidis] gi|7225952|gb|AAF41138.1| modification methylase HgaI-1 [Neisseria meningitidis MC58] gi|308388915|gb|ADO31235.1| modification methylase HgaI-1 [Neisseria meningitidis alpha710] gi|316983707|gb|EFV62688.1| modification methylase HgaIA [Neisseria meningitidis H44/76] gi|325133760|gb|EGC56416.1| DNA-cytosine methyltransferase [Neisseria meningitidis M13399] gi|325140119|gb|EGC62648.1| DNA-cytosine methyltransferase [Neisseria meningitidis CU385] gi|325144071|gb|EGC66379.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240013] gi|325200590|gb|ADY96045.1| DNA-cytosine methyltransferase [Neisseria meningitidis H44/76] gi|325206432|gb|ADZ01885.1| DNA-cytosine methyltransferase [Neisseria meningitidis M04-240196] gi|325207770|gb|ADZ03222.1| DNA-cytosine methyltransferase [Neisseria meningitidis NZ-05/33] Length = 352 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 1/47 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID 48 + D+GV Q R+R II S + P + + D + Sbjct: 160 DSADYGVAQHRKRA-IIRMNKHSTIWGMPEKVTKTISVRDAISFLPS 205 >gi|325136051|gb|EGC58661.1| DNA-cytosine methyltransferase [Neisseria meningitidis M0579] gi|325202478|gb|ADY97932.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240149] Length = 351 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 1/47 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID 48 + D+GV Q R+R II S + P + + D + Sbjct: 159 DSADYGVAQHRKRA-IIRMNKHSTIWGMPEKVTKTISVRDAISFLPS 204 >gi|302187943|ref|ZP_07264616.1| C-5 cytosine-specific DNA methylase family protein [Pseudomonas syringae pv. syringae 642] Length = 307 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 13/24 (54%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV 25 D GVPQ R RL+++ + + Sbjct: 145 DCADLGVPQHRVRLFLVCTRSKAP 168 >gi|28869583|ref|NP_792202.1| C-5 cytosine-specific DNA methylase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28852825|gb|AAO55897.1| C-5 cytosine-specific DNA methylase family protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 295 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 13/24 (54%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV 25 D GVPQ R RL+++ + + Sbjct: 145 DCADLGVPQHRVRLFLVCTRSKAP 168 >gi|304373002|ref|YP_003856211.1| DNA-cytosine methyltransferase family protein [Mycoplasma hyorhinis HUB-1] gi|304309193|gb|ADM21673.1| DNA-cytosine methyltransferase family protein [Mycoplasma hyorhinis HUB-1] Length = 407 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 35/101 (34%), Gaps = 14/101 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G QRR+R++I + + + +IL I D S L E Sbjct: 162 IDASDYGFVQRRKRVFIFAYKKELT-----QIINKEQNQENIL---IKDGFFASEFLVES 213 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 K K + +N S +Y GS I Sbjct: 214 ------QCKKTNKSDILKNYSNLVDVSNNFSFSFYNSGSMI 248 >gi|302760531|ref|XP_002963688.1| hypothetical protein SELMODRAFT_80009 [Selaginella moellendorffii] gi|300168956|gb|EFJ35559.1| hypothetical protein SELMODRAFT_80009 [Selaginella moellendorffii] Length = 1471 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 15/34 (44%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +G+ Q R R I V +P P+ Sbjct: 1213 LQAGHYGISQSRTRAIIWAAAPDEVLPDWPEPVH 1246 >gi|302786012|ref|XP_002974777.1| hypothetical protein SELMODRAFT_232368 [Selaginella moellendorffii] gi|300157672|gb|EFJ24297.1| hypothetical protein SELMODRAFT_232368 [Selaginella moellendorffii] Length = 1335 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 15/34 (44%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 ++A +G+ Q R R I V +P P+ Sbjct: 1077 LQAGHYGISQSRTRAIIWAAAPDEVLPDWPEPVH 1110 >gi|225683838|gb|EEH22122.1| c5 cytosine methyltransferase DmtA [Paracoccidioides brasiliensis Pb03] Length = 571 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 14/19 (73%) Query: 1 MKACDFGVPQRRERLYIID 19 +K D+GVPQ R+RL I+ Sbjct: 444 LKCQDYGVPQPRQRLIILG 462 >gi|29350162|ref|NP_813665.1| putative cytosine-specific methyltransferase [Bacteroides thetaiotaomicron VPI-5482] gi|29342074|gb|AAO79859.1| putative cytosine-specific methyltransferase [Bacteroides thetaiotaomicron VPI-5482] Length = 402 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 5/25 (20%), Positives = 11/25 (44%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE 26 ++G+PQ+R R ++ Sbjct: 169 NFGEYGIPQKRTRFILVGVRKDVPN 193 >gi|167897069|ref|ZP_02484471.1| modification methylase (cytosine-specific DNA methylase) [Burkholderia pseudomallei 7894] Length = 349 Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 6/50 (12%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPT--PLGIKPRLGDILEEHIDD 49 A D+GVPQRR+RL + + P P+ + + D + + + Sbjct: 160 DAADYGVPQRRKRLLVKASRFGKI----PDAHPVKERRTVKDAIADLLPP 205 >gi|299065029|emb|CBJ36133.1| DNA-cytosine methyltransferase [Ralstonia solanacearum CMR15] Length = 385 Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 12/25 (48%), Gaps = 1/25 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV 25 + A F VPQ R RL+++ Sbjct: 149 IDAALF-VPQSRPRLFVVGIRKDLP 172 >gi|169977312|emb|CAQ18903.1| chromomethylase [Nicotiana sylvestris] gi|169977314|emb|CAQ18904.1| chromomethylase [Nicotiana sylvestris] gi|169977316|emb|CAQ18905.1| chromomethylase [Nicotiana sylvestris] gi|169977318|emb|CAQ18906.1| chromomethylase [Nicotiana sylvestris] Length = 741 Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 15/30 (50%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 +G+PQ R R+++ L ++P P Sbjct: 450 YGLPQFRRRVFMWGALPSEKLPQYPLPTHN 479 >gi|288926887|ref|ZP_06420787.1| modification methylase HindV (Cytosine-specific methyltransferase HindV) [Prevotella buccae D17] gi|288336326|gb|EFC74707.1| modification methylase HindV (Cytosine-specific methyltransferase HindV) [Prevotella buccae D17] Length = 313 Score = 36.1 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 16/27 (59%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEF 27 + A GVPQ+R+R +I L + +F Sbjct: 142 LNAALCGVPQKRKRFVMIGKLGTADDF 168 >gi|242316067|ref|ZP_04815083.1| modification methylase HgiDII [Burkholderia pseudomallei 1106b] gi|242139306|gb|EES25708.1| modification methylase HgiDII [Burkholderia pseudomallei 1106b] Length = 349 Score = 36.1 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 17/38 (44%), Gaps = 2/38 (5%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL 39 + +GVPQ R R+ ++ + + + P P+ Sbjct: 156 DSSRYGVPQMRRRMVLLASKHGDI--EMIEPTHKTPKT 191 >gi|172039658|ref|YP_001806159.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC 51142] gi|171701112|gb|ACB54093.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC 51142] Length = 321 Score = 36.1 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 30/90 (33%), Gaps = 12/90 (13%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A GVPQ+R+R + + P + + + + +KL G Sbjct: 144 LDASLCGVPQKRKRFFWVGIYQEKDNTLIPYLKKNLSKKA------MTVRDYLGDKL--G 195 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTL 90 + + + + + + + T+ Sbjct: 196 IEYYYRHPRSYKRRGIFSI----DEPSPTI 221 >gi|169834659|ref|YP_001693426.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str. Okra] gi|169123207|gb|ACA47042.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str. Okra] Length = 490 Score = 36.1 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 12/37 (32%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 + A FGV Q R R II + P Sbjct: 314 LNAVHFGVAQERRRAVIIGSKIGKINIFNPIKRFTNT 350 >gi|126453573|ref|YP_001067912.1| modification methylase HgiDII [Burkholderia pseudomallei 1106a] gi|126227215|gb|ABN90755.1| modification methylase HgiDII [Burkholderia pseudomallei 1106a] Length = 344 Score = 36.1 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 17/38 (44%), Gaps = 2/38 (5%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRL 39 + +GVPQ R R+ ++ + + + P P+ Sbjct: 151 DSSRYGVPQMRRRMVLLASKHGDI--EMIEPTHKTPKT 186 >gi|124027997|ref|YP_001013317.1| site-specific DNA methylase [Hyperthermus butylicus DSM 5456] gi|123978691|gb|ABM80972.1| Site-specific DNA methylase [Hyperthermus butylicus DSM 5456] Length = 319 Score = 36.1 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 6/49 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDD 49 +KA D+G P R R++I + P P + + + L + Sbjct: 153 LKAEDYGTPSHRLRVFISNIRIK------PRPHRRRITVAEALRGLPEP 195 >gi|296242618|ref|YP_003650105.1| DNA-cytosine methyltransferase [Thermosphaera aggregans DSM 11486] gi|296095202|gb|ADG91153.1| DNA-cytosine methyltransferase [Thermosphaera aggregans DSM 11486] Length = 461 Score = 36.1 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 13/24 (54%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVE 26 A FGV Q+R RL ++ ++ Sbjct: 184 ATAFGVAQQRRRLIVVGIRKDLIK 207 >gi|299145238|ref|ZP_07038306.1| putative cytosine-specific methyltransferase protein [Bacteroides sp. 3_1_23] gi|298515729|gb|EFI39610.1| putative cytosine-specific methyltransferase protein [Bacteroides sp. 3_1_23] Length = 402 Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 5/25 (20%), Positives = 11/25 (44%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE 26 ++G+PQ+R R ++ Sbjct: 169 NFGEYGIPQKRTRFILVGVRKDVPN 193 >gi|16272974|ref|NP_439200.1| modification methylase [Haemophilus influenzae Rd KW20] gi|1171050|sp|P45000|MTH5_HAEIN RecName: Full=Modification methylase HindV; Short=M.HindV; AltName: Full=Cytosine-specific methyltransferase HindV gi|1574073|gb|AAC22700.1| modification methylase [Haemophilus influenzae Rd KW20] Length = 304 Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 27/94 (28%), Gaps = 20/94 (21%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFP----TPLGIKPRLGDILEEHIDDKSTISNK 56 + A GVPQ R R +I LN F P + D L ++ Sbjct: 142 LDASYCGVPQSRTRFSLIGKLNSEHNFLIPTLSRKLSDKPMTVRDYLGNSLN-------- 193 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTL 90 + + + + F + T+ Sbjct: 194 ----LEFYYRHPR----NYNRRGIFSIDEPSPTI 219 >gi|85710862|ref|ZP_01041923.1| modification methylase (Cytosine-specific methyltransferase) [Idiomarina baltica OS145] gi|85695266|gb|EAQ33203.1| modification methylase (Cytosine-specific methyltransferase) [Idiomarina baltica OS145] Length = 515 Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 16/93 (17%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 +K+ ++GVPQ R R+ ++ + PR + L + KST+ L + Sbjct: 243 IKSENYGVPQARHRVILLGVRAD---------IEGTPRTLNRL----EHKSTVEQVLADL 289 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + R +K + N+A T+ R Sbjct: 290 PKLRSGFSKRKDTVKDWESVVSNNA---TIVKR 319 >gi|213498014|emb|CAS84142.1| chromomethylase [Nicotiana tomentosiformis] Length = 500 Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 15/30 (50%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 +G+PQ R R+++ L ++P P Sbjct: 261 YGLPQFRRRVFMWGALPSEKLPQYPLPTHN 290 >gi|317509458|ref|ZP_07967076.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC BAA-974] gi|316252287|gb|EFV11739.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC BAA-974] Length = 321 Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 15/22 (68%) Query: 1 MKACDFGVPQRRERLYIIDFLN 22 + A GVPQ R+RL+ I FL+ Sbjct: 152 LDASRCGVPQIRKRLFTIGFLD 173 >gi|311104267|ref|YP_003977120.1| methyltransferase [Achromobacter xylosoxidans A8] gi|310758956|gb|ADP14405.1| cytosine-specific methyltransferase [Achromobacter xylosoxidans A8] Length = 536 Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 15/26 (57%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A FGV QRR R++++ V+ Sbjct: 187 LDAQYFGVAQRRRRVFLVASGGGGVD 212 >gi|79835472|gb|ABB52097.1| Mod [Arthrospira platensis] Length = 321 Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 22/79 (27%), Gaps = 10/79 (12%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP---------LGIKPRLGDILEEHIDDKS 51 +++ +GVPQ R R I +P P + + Sbjct: 224 LESAAYGVPQIRPRAIFIANRFGMKN-PYPYPQLVPEEYQTIESAISDLPAYQPIPSINH 282 Query: 52 TISNKLWEGHQKRKENNKI 70 + E ++ + + Sbjct: 283 EWTRHSPEYMERISKVPQE 301 >gi|171184904|ref|YP_001793823.1| DNA-cytosine methyltransferase [Thermoproteus neutrophilus V24Sta] gi|170934116|gb|ACB39377.1| DNA-cytosine methyltransferase [Thermoproteus neutrophilus V24Sta] Length = 462 Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 11/20 (55%), Positives = 12/20 (60%) Query: 7 GVPQRRERLYIIDFLNPSVE 26 GVPQRRERL I V+ Sbjct: 193 GVPQRRERLIIAGLRRDIVK 212 >gi|331090172|ref|ZP_08339060.1| hypothetical protein HMPREF1025_02643 [Lachnospiraceae bacterium 3_1_46FAA] gi|330402118|gb|EGG81690.1| hypothetical protein HMPREF1025_02643 [Lachnospiraceae bacterium 3_1_46FAA] Length = 681 Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 9/18 (50%), Positives = 14/18 (77%) Query: 2 KACDFGVPQRRERLYIID 19 A +GVPQRR+R+Y++ Sbjct: 177 DAQYWGVPQRRKRIYLVA 194 >gi|325129892|gb|EGC52695.1| DNA-cytosine methyltransferase [Neisseria meningitidis OX99.30304] Length = 335 Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 1/47 (2%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID 48 + D+GV Q R+R II S + P + + D + Sbjct: 143 DSADYGVAQHRKRA-IIRMNKHSTIWGMPEKVTKTISVRDAISFLPS 188 >gi|304390602|ref|ZP_07372555.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326358|gb|EFL93603.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 321 Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 14/27 (51%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEF 27 + A GVPQ+R R +++ L F Sbjct: 164 LDASLCGVPQKRRRFFLVGRLGAPDGF 190 >gi|288917811|ref|ZP_06412172.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f] gi|288350739|gb|EFC84955.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f] Length = 389 Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 7/20 (35%), Positives = 11/20 (55%) Query: 2 KACDFGVPQRRERLYIIDFL 21 A D GV Q R R++++ Sbjct: 180 NAADLGVGQERRRVFLVGMR 199 >gi|322832506|ref|YP_004212533.1| C-5 cytosine-specific DNA methylase [Rahnella sp. Y9602] gi|321167707|gb|ADW73406.1| C-5 cytosine-specific DNA methylase [Rahnella sp. Y9602] Length = 665 Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 ++ACDFG P R R +++ ++P P+ D+ Sbjct: 196 LRACDFGAPTIRRRFFMV-MRCDGQPVEWPAASHGDPKSLDV 236 >gi|300867524|ref|ZP_07112175.1| putative Modification methylase HgiDII [Oscillatoria sp. PCC 6506] gi|300334518|emb|CBN57345.1| putative Modification methylase HgiDII [Oscillatoria sp. PCC 6506] Length = 361 Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 13/21 (61%) Query: 2 KACDFGVPQRRERLYIIDFLN 22 A D+GVPQRR R + LN Sbjct: 169 DAADYGVPQRRIRCILFAVLN 189 >gi|253991771|ref|YP_003043127.1| DNA cytosine methyltransferase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638546|emb|CAR67167.1| dna-cytosine methyltransferase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783221|emb|CAQ86386.1| dna-cytosine methyltransferase [Photorhabdus asymbiotica] Length = 202 Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 13/19 (68%) Query: 1 MKACDFGVPQRRERLYIID 19 + A FGV QRR R++++ Sbjct: 2 LDAQYFGVAQRRRRVFVVA 20 >gi|210062530|gb|ACJ06270.1| DNA-cytosine methyltransferase [Photorhabdus luminescens] Length = 369 Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 13/19 (68%) Query: 1 MKACDFGVPQRRERLYIID 19 + A FGV QRR R++++ Sbjct: 174 LDAQYFGVAQRRRRVFVVA 192 >gi|148827577|ref|YP_001292330.1| hypothetical protein CGSHiGG_05020 [Haemophilus influenzae PittGG] gi|319775697|ref|YP_004138185.1| Cytosine-specific methyltransferase (pseudogene) [Haemophilus influenzae F3047] gi|319896763|ref|YP_004134957.1| cytosine-specific methyltransferase [Haemophilus influenzae F3031] gi|148718819|gb|ABQ99946.1| hypothetical protein CGSHiGG_05020 [Haemophilus influenzae PittGG] gi|317432266|emb|CBY80618.1| Cytosine-specific methyltransferase [Haemophilus influenzae F3031] gi|317450288|emb|CBY86504.1| Cytosine-specific methyltransferase (pseudogene) [Haemophilus influenzae F3047] Length = 424 Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 13/19 (68%) Query: 1 MKACDFGVPQRRERLYIID 19 + A FGV QRR R++++ Sbjct: 173 LDAQYFGVAQRRRRVFVVA 191 >gi|145629891|ref|ZP_01785682.1| modification methylase Bsp6I-like protein [Haemophilus influenzae 22.1-21] gi|144977718|gb|EDJ87668.1| modification methylase Bsp6I-like protein [Haemophilus influenzae 22.1-21] Length = 411 Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 13/19 (68%) Query: 1 MKACDFGVPQRRERLYIID 19 + A FGV QRR R++++ Sbjct: 160 LDAQYFGVAQRRRRVFVVA 178 >gi|46906547|ref|YP_012936.1| C-5 cytosine-specific DNA methylase family protein [Listeria monocytogenes serotype 4b str. F2365] gi|46879812|gb|AAT03113.1| C-5 cytosine-specific DNA methylase family protein [Listeria monocytogenes serotype 4b str. F2365] Length = 469 Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A ++G QRR R++ + N + K+ + K + E ++D SN+ + Sbjct: 168 INAAEYGRAQRRRRVFFFVYRNDT---KWAKKIDEKYENEKLEEGLLEDVVIASNQYDDY 224 Query: 61 H 61 Sbjct: 225 I 225 >gi|213692399|ref|YP_002322985.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523860|gb|ACJ52607.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320458540|dbj|BAJ69161.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 401 Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 9/18 (50%), Positives = 14/18 (77%) Query: 1 MKACDFGVPQRRERLYII 18 + A FGV QRRER++++ Sbjct: 148 LDAQFFGVAQRRERVFLV 165 >gi|154486240|ref|ZP_02027647.1| hypothetical protein BIFADO_00043 [Bifidobacterium adolescentis L2-32] gi|154084103|gb|EDN83148.1| hypothetical protein BIFADO_00043 [Bifidobacterium adolescentis L2-32] Length = 220 Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 9/18 (50%), Positives = 14/18 (77%) Query: 1 MKACDFGVPQRRERLYII 18 + A FGV QRRER++++ Sbjct: 2 LDAQFFGVAQRRERVFLV 19 >gi|312213040|emb|CBX93122.1| hypothetical protein [Leptosphaeria maculans] Length = 757 Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 17/46 (36%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDD 49 G+ QRR+RL II + FP G ++D Sbjct: 480 SKHGLAQRRKRLLIIAARRGTPLPHFPKESHGPSGSGLQPFVYVDK 525 >gi|121592996|ref|YP_984892.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42] gi|120605076|gb|ABM40816.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42] Length = 449 Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 12/18 (66%) Query: 2 KACDFGVPQRRERLYIID 19 A D+G Q+R RL+++ Sbjct: 185 NAADYGFAQKRRRLFMVA 202 >gi|293417389|ref|ZP_06660013.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185] gi|291430909|gb|EFF03905.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185] Length = 345 Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Query: 5 DFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQKR 64 D+GVPQ R R ++ + F P + + + + K+ ++ + H+ Sbjct: 152 DYGVPQNRVRHVLLASKFAPLSFVKPK-VEKAVTVKECIGGLPPLKAGQTDPVDPLHKAS 210 Query: 65 KENN 68 K ++ Sbjct: 211 KLSD 214 >gi|169977308|emb|CAQ18901.1| chromomethylase [Nicotiana sylvestris] Length = 308 Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 16/30 (53%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 +G+PQ R R+++ L+ ++P P Sbjct: 20 YGLPQFRMRVFMWGALSSEKLPQYPLPTHK 49 >gi|268595503|ref|ZP_06129670.1| LOW QUALITY PROTEIN: DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae 35/02] gi|268597557|ref|ZP_06131724.1| LOW QUALITY PROTEIN: DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae FA19] gi|268602062|ref|ZP_06136229.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae PID18] gi|268604402|ref|ZP_06138569.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae PID1] gi|268682863|ref|ZP_06149725.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae PID332] gi|268685010|ref|ZP_06151872.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae SK-92-679] gi|268687288|ref|ZP_06154150.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae SK-93-1035] gi|291043038|ref|ZP_06568771.1| LOW QUALITY PROTEIN: DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae DGI2] gi|268548892|gb|EEZ44310.1| LOW QUALITY PROTEIN: DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae 35/02] gi|268551345|gb|EEZ46364.1| LOW QUALITY PROTEIN: DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae FA19] gi|268586193|gb|EEZ50869.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae PID18] gi|268588533|gb|EEZ53209.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae PID1] gi|268623147|gb|EEZ55547.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae PID332] gi|268625294|gb|EEZ57694.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae SK-92-679] gi|268627572|gb|EEZ59972.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae SK-93-1035] gi|291013041|gb|EFE05014.1| LOW QUALITY PROTEIN: DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae DGI2] Length = 205 Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 20/72 (27%), Gaps = 15/72 (20%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTIS-----NK 56 D+G+PQ R+R +I I + K Sbjct: 134 NTADYGIPQSRKRFTLIANR----------ITKKSWNQSSIRANGLRYAMFWEWKTAFPK 183 Query: 57 LWEGHQKRKENN 68 LW+ + R+ Sbjct: 184 LWQDIKTRRILC 195 >gi|229824476|ref|ZP_04450545.1| hypothetical protein GCWU000282_01799 [Catonella morbi ATCC 51271] gi|229786077|gb|EEP22191.1| hypothetical protein GCWU000282_01799 [Catonella morbi ATCC 51271] Length = 414 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 14/21 (66%) Query: 1 MKACDFGVPQRRERLYIIDFL 21 + A +FGVPQ R R Y+I L Sbjct: 213 LDARNFGVPQSRIRTYMISVL 233 >gi|169633047|ref|YP_001706783.1| putative C-5 cytosine-specific DNA methylase [Acinetobacter baumannii SDF] gi|169151839|emb|CAP00671.1| putative C-5 cytosine-specific DNA methylase [Acinetobacter baumannii] Length = 517 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 A DFG P +RERL++I +P K G++ Sbjct: 220 AADFGAPTKRERLFLIA-RCDGQPIVWPEKYFSKKPKGNL 258 >gi|193077633|gb|ABO12463.2| DNA cytosine methyltransferase [Acinetobacter baumannii ATCC 17978] Length = 525 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 A DFG P +RERL++I +P K G++ Sbjct: 220 AADFGAPTKRERLFLIA-RCDGQPIVWPEKYFSKKPKGNL 258 >gi|304389119|ref|ZP_07371161.1| adenine/cytosine DNA methyltransferase [Neisseria meningitidis ATCC 13091] gi|304336918|gb|EFM03110.1| adenine/cytosine DNA methyltransferase [Neisseria meningitidis ATCC 13091] Length = 499 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 24/97 (24%), Gaps = 6/97 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK----FPTPLGIKPRLGDILEEHIDDKSTISNK 56 + D+G R R +I FP P+ L + + Sbjct: 200 LNFKDYGANSSRTRTLVIGVRKDIHHITPYDIFPKQTP--PKTLRTLLADLPPLMQMGEI 257 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + L SA NT AR Sbjct: 258 SDDDIYHSYREFDRRMLPWIAQLKEGESAFQNTDPAR 294 >gi|229590290|ref|YP_002872409.1| putative cytosine-specific modification methylase [Pseudomonas fluorescens SBW25] gi|229362156|emb|CAY49058.1| putative cytosine-specific modification methylase [Pseudomonas fluorescens SBW25] Length = 637 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 27/87 (31%), Gaps = 4/87 (4%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTP-LGIKPRLGDILEEHIDDKSTISN--KLWE 59 A + G P R+RLY++ + + +P P KP + SN K Sbjct: 211 AANAGAPTIRKRLYLVA-RSDGLPIVWPEPVRHKKPTAKQQPWRTAAECIDWSNLGKTIF 269 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSAT 86 + N + + + Sbjct: 270 RDKPMALNTRRRVAKGMWRHVITSDKP 296 >gi|149190453|ref|ZP_01868724.1| DNA-cytosine methyltransferase [Vibrio shilonii AK1] gi|148835707|gb|EDL52673.1| DNA-cytosine methyltransferase [Vibrio shilonii AK1] Length = 373 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 11/23 (47%) Query: 2 KACDFGVPQRRERLYIIDFLNPS 24 FG PQRR R+YI+ Sbjct: 225 DTKYFGTPQRRRRVYIVASYGDM 247 >gi|329962528|ref|ZP_08300509.1| C-5 cytosine-specific DNA methylase [Bacteroides fluxus YIT 12057] gi|328529784|gb|EGF56676.1| C-5 cytosine-specific DNA methylase [Bacteroides fluxus YIT 12057] Length = 370 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 26/71 (36%), Gaps = 3/71 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+G R+R + I F + FP P K D+ + +K ++ + Sbjct: 191 LNAADYGAYTTRKRFFGI-FAQKGLPIVFPEPTHCKGGRQDMFTKL--EKWKPVKEVLDF 247 Query: 61 HQKRKENNKIA 71 + + Sbjct: 248 SDESTSIFREK 258 >gi|307210936|gb|EFN87251.1| tRNA (cytosine-5-)-methyltransferase [Harpegnathos saltator] Length = 238 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 18/52 (34%), Gaps = 1/52 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKST 52 + FG+P R R Y++ +F F ++L+ K Sbjct: 145 LSPSQFGIPNSRRRYYLLAKRKDL-KFCFEQTPLQNDSSSELLKLLPKSKHF 195 >gi|254494408|ref|ZP_05107579.1| LOW QUALITY PROTEIN: DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae 1291] gi|268599718|ref|ZP_06133885.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae MS11] gi|226513448|gb|EEH62793.1| LOW QUALITY PROTEIN: DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae 1291] gi|268583849|gb|EEZ48525.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae MS11] Length = 201 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 20/72 (27%), Gaps = 15/72 (20%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTIS-----NK 56 D+G+PQ R+R +I I + K Sbjct: 130 NTADYGIPQSRKRFTLIANR----------ITKKSWNQSSIRANGLRYAMFWEWKTAFPK 179 Query: 57 LWEGHQKRKENN 68 LW+ + R+ Sbjct: 180 LWQDIKTRRILC 191 >gi|325266450|ref|ZP_08133127.1| modification methylase XorII [Kingella denitrificans ATCC 33394] gi|324981893|gb|EGC17528.1| modification methylase XorII [Kingella denitrificans ATCC 33394] Length = 371 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 26/90 (28%), Gaps = 13/90 (14%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVE--------FKFPTPLGIKPRLGDILEEHIDDKSTI 53 A D G P +R R+ I+ + + F P + D +++ Sbjct: 153 DASDCGAPTKRRRVIIVGYDKAHFDSLSESHFRFTLPK-----VNVADAIKDLPAPIPHS 207 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFEN 83 + G E ++++ Sbjct: 208 DSGYDWGFSAYPEASELSEYARQMRSPAPK 237 >gi|126642081|ref|YP_001085065.1| DNA cytosine methyltransferase [Acinetobacter baumannii ATCC 17978] Length = 486 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 A DFG P +RERL++I +P K G++ Sbjct: 181 AADFGAPTKRERLFLIA-RCDGQPIVWPEKYFSKKPKGNL 219 >gi|319777547|ref|YP_004137198.1| cytosine-specific methyltransferase [Mycoplasma fermentans M64] gi|318038622|gb|ADV34821.1| Cytosine-specific methyltransferase [Mycoplasma fermentans M64] Length = 416 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 33/108 (30%), Gaps = 17/108 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-------------SVEFKFPTPLGIKPRLGDILEEHI 47 + D G Q R+R++ + N F IK + + + Sbjct: 217 LNGKDHGSLQHRKRVFALSVRNDLKVPFKENDESYLDELLNFGKEREIKNKWKEFAKIFD 276 Query: 48 DDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSAT----TNTLS 91 + +K + ++A + Y ++N NTL+ Sbjct: 277 LENKKEEESKEALIKKSQSRERMAFENKNYSTIYKNQKIDECRINTLT 324 >gi|209528195|ref|ZP_03276665.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209491380|gb|EDZ91765.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 315 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 22/80 (27%), Gaps = 5/80 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP---LGIKPRLGDILEEHIDDKSTIS-NK 56 + + +GVPQ R R I +P P + + + + S N Sbjct: 207 LASAAYGVPQIRPRAIFIANRFGMEN-PYPNPQLVPEEYQTIESAISDLPAYQPIPSINH 265 Query: 57 LWEGHQKRKENNKIAGKGFG 76 W H G Sbjct: 266 EWTRHSPEYMERISKVPPGG 285 >gi|317488614|ref|ZP_07947157.1| C-5 cytosine-specific DNA methylase [Eggerthella sp. 1_3_56FAA] gi|316912266|gb|EFV33832.1| C-5 cytosine-specific DNA methylase [Eggerthella sp. 1_3_56FAA] Length = 308 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 15/26 (57%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + A GVPQ R+RL I + N + + Sbjct: 148 IDASRVGVPQSRKRLITIGWKNANKQ 173 >gi|294673127|ref|YP_003573743.1| C-5 cytosine-specific family DNA methylase [Prevotella ruminicola 23] gi|294473723|gb|ADE83112.1| DNA methylase, C-5 cytosine-specific family [Prevotella ruminicola 23] Length = 346 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 14/22 (63%) Query: 2 KACDFGVPQRRERLYIIDFLNP 23 A ++G+PQ+R+R+ + P Sbjct: 168 NALEYGIPQKRKRVLFLASKKP 189 >gi|170739771|ref|YP_001768426.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46] gi|168194045|gb|ACA15992.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46] Length = 434 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 15/24 (62%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS 24 ++A D+GVPQRR R ++ + Sbjct: 165 LRAADWGVPQRRPRFVLLAAPKGT 188 >gi|293418093|ref|ZP_06660714.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185] gi|291430224|gb|EFF03223.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185] Length = 363 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 16/37 (43%), Gaps = 4/37 (10%) Query: 2 KACDFGVPQRRERLYIIDFLNPS----VEFKFPTPLG 34 + ++G PQ R+R+++ EF + + Sbjct: 167 NSIEYGSPQDRDRIFLFGINKKLSANIAEFPWQKFIK 203 >gi|238810090|dbj|BAH69880.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 416 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 33/108 (30%), Gaps = 17/108 (15%) Query: 1 MKACDFGVPQRRERLYIIDFLNP-------------SVEFKFPTPLGIKPRLGDILEEHI 47 + D G Q R+R++ + N F IK + + + Sbjct: 217 LNGKDHGSLQHRKRVFALSVRNDLKVPFKENDESYLDELLNFGKEREIKNKWKEFAKIFD 276 Query: 48 DDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSAT----TNTLS 91 + +K + ++A + Y ++N NTL+ Sbjct: 277 LENKKEEESKEALIKKSQSRERMAFENKNYSTIYKNQKIDECRINTLT 324 >gi|94264149|ref|ZP_01287946.1| C-5 cytosine-specific DNA methylase [delta proteobacterium MLMS-1] gi|93455407|gb|EAT05605.1| C-5 cytosine-specific DNA methylase [delta proteobacterium MLMS-1] Length = 578 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 3/54 (5%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTP--LGIKPRLGDILEEHIDDKSTISNKL 57 +G+PQ R R+ +I P P + +L + +S +S ++ Sbjct: 310 YGIPQARHRVILIGVREDYA-LAAPIPLSTKKQVSTASVLNDLPKLRSGLSREM 362 >gi|11138959|gb|AAG31558.1| SgrAIM methylase [Streptomyces griseus] Length = 429 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 9/21 (42%) Query: 3 ACDFGVPQRRERLYIIDFLNP 23 A D GVPQ R R + Sbjct: 183 ASDHGVPQLRRRAIFFGVRDG 203 >gi|167754389|ref|ZP_02426516.1| hypothetical protein ALIPUT_02683 [Alistipes putredinis DSM 17216] gi|167659014|gb|EDS03144.1| hypothetical protein ALIPUT_02683 [Alistipes putredinis DSM 17216] Length = 495 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK 36 + + D+G R R + I F S+ FP P K Sbjct: 175 LNSADYGAYTTRRRFFGI-FAKESLPIVFPEPTHSK 209 >gi|218192371|gb|EEC74798.1| hypothetical protein OsI_10599 [Oryza sativa Indica Group] Length = 1760 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 16/32 (50%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 A +G+PQ R R ++ L V KFP P Sbjct: 713 AGYYGLPQFRMRAFLWGALPSMVLPKFPLPTH 744 >gi|162149342|ref|YP_001603803.1| hypothetical protein GDI_3575 [Gluconacetobacter diazotrophicus PAl 5] gi|161787919|emb|CAP57518.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus PAl 5] Length = 354 Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 6/31 (19%), Positives = 12/31 (38%), Gaps = 1/31 (3%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 D G+P R R + + + ++P Sbjct: 12 ADHGIPTSRRRWFAVARRDGQP-IEWPEQTH 41 >gi|24421681|gb|AAN60988.1| Putative DNA cytosine methyltransferase MET2a [Oryza sativa Japonica Group] gi|108706955|gb|ABF94750.1| C-5 cytosine-specific DNA methylase family protein, expressed [Oryza sativa Japonica Group] Length = 1761 Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 16/32 (50%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 A +G+PQ R R ++ L V KFP P Sbjct: 713 AGYYGLPQFRMRAFLWGALPSMVLPKFPLPTH 744 >gi|312278085|gb|ADQ62742.1| Cytosine-specific methyltransferase [Streptococcus thermophilus ND03] Length = 424 Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 13/25 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV 25 + A D+G QRR R++ + N Sbjct: 159 INAADYGRSQRRRRVFFFIYRNDIP 183 >gi|194099467|ref|YP_002002587.1| Modification methylase [Neisseria gonorrhoeae NCCP11945] gi|239999690|ref|ZP_04719614.1| Modification methylase [Neisseria gonorrhoeae 35/02] gi|240014438|ref|ZP_04721351.1| Modification methylase [Neisseria gonorrhoeae DGI18] gi|240016883|ref|ZP_04723423.1| Modification methylase [Neisseria gonorrhoeae FA6140] gi|240081457|ref|ZP_04726000.1| Modification methylase [Neisseria gonorrhoeae FA19] gi|240113656|ref|ZP_04728146.1| Modification methylase [Neisseria gonorrhoeae MS11] gi|240116398|ref|ZP_04730460.1| Modification methylase [Neisseria gonorrhoeae PID18] gi|240118688|ref|ZP_04732750.1| Modification methylase [Neisseria gonorrhoeae PID1] gi|240120960|ref|ZP_04733922.1| Modification methylase [Neisseria gonorrhoeae PID24-1] gi|240124236|ref|ZP_04737192.1| Modification methylase [Neisseria gonorrhoeae PID332] gi|240126425|ref|ZP_04739311.1| Modification methylase [Neisseria gonorrhoeae SK-92-679] gi|240128904|ref|ZP_04741565.1| Modification methylase [Neisseria gonorrhoeae SK-93-1035] gi|260439778|ref|ZP_05793594.1| Modification methylase [Neisseria gonorrhoeae DGI2] gi|193934757|gb|ACF30581.1| Modification methylase [Neisseria gonorrhoeae NCCP11945] gi|317164977|gb|ADV08518.1| Modification methylase [Neisseria gonorrhoeae TCDC-NG08107] Length = 170 Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 20/72 (27%), Gaps = 15/72 (20%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTIS-----NK 56 D+G+PQ R+R +I I + K Sbjct: 99 NTADYGIPQSRKRFTLIANR----------ITKKSWNQSSIRANGLRYAMFWEWKTAFPK 148 Query: 57 LWEGHQKRKENN 68 LW+ + R+ Sbjct: 149 LWQDIKTRRILC 160 >gi|297739809|emb|CBI29991.3| unnamed protein product [Vitis vinifera] Length = 827 Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 14/32 (43%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 A +GVPQ R R+++ +P P Sbjct: 520 AGSYGVPQYRMRVFLWGAHPMEKLPPYPLPTH 551 >gi|126653134|ref|ZP_01725263.1| hypothetical protein BB14905_12885 [Bacillus sp. B14905] gi|126590139|gb|EAZ84264.1| hypothetical protein BB14905_12885 [Bacillus sp. B14905] Length = 322 Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 14/22 (63%) Query: 1 MKACDFGVPQRRERLYIIDFLN 22 + A ++G QRR R++I + N Sbjct: 69 INASEYGNAQRRRRVFIFAYKN 90 >gi|228478248|ref|ZP_04062856.1| modification methylase Sau3AI [Streptococcus salivarius SK126] gi|228249927|gb|EEK09197.1| modification methylase Sau3AI [Streptococcus salivarius SK126] Length = 424 Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 13/25 (52%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSV 25 + A D+G QRR R++ + N Sbjct: 159 INAADYGRSQRRRRVFFFIYRNDIP 183 >gi|225441510|ref|XP_002275932.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 829 Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 14/32 (43%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 A +GVPQ R R+++ +P P Sbjct: 522 AGSYGVPQYRMRVFLWGAHPMEKLPPYPLPTH 553 >gi|283834737|ref|ZP_06354478.1| modification methylase HgiDII [Citrobacter youngae ATCC 29220] gi|291068977|gb|EFE07086.1| modification methylase HgiDII [Citrobacter youngae ATCC 29220] Length = 351 Score = 35.8 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 + + +GVPQ+R+RL ++ L+ S F PTP Sbjct: 153 ISSEFYGVPQQRKRLVVLAKLHGSPAF--PTPTH 184 >gi|229148238|ref|ZP_04276541.1| Phage-related DNA methylase [Bacillus cereus BDRD-ST24] gi|228635250|gb|EEK91777.1| Phage-related DNA methylase [Bacillus cereus BDRD-ST24] Length = 180 Score = 35.8 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 16/23 (69%) Query: 3 ACDFGVPQRRERLYIIDFLNPSV 25 + + GVPQRR+R++I +L S Sbjct: 152 STEVGVPQRRKRIFIAGYLRGSG 174 >gi|328958689|ref|YP_004376075.1| DNA-methyltransferase [Carnobacterium sp. 17-4] gi|328675013|gb|AEB31059.1| DNA-methyltransferase [Carnobacterium sp. 17-4] Length = 431 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 30/87 (34%), Gaps = 4/87 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A ++G QRR R++ + N + F + + + L+ D + +G Sbjct: 163 INAAEYGGSQRRRRVFFFVYRNDT---DFAKKMDKEF-ENEELDLFFDSQLYDDYIFNKG 218 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATT 87 R+ + + ++ Sbjct: 219 LFARQFPVLPTPVKNRHATYTLSNDIV 245 >gi|323650700|gb|ADX97434.1| M2.BspACI [Bacillus psychrodurans] Length = 444 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLN-PSVEFKFPTPLGIKPRLGDILE 44 + + + GVPQ R+R YI+ ++ PS +F + L L Sbjct: 229 INSSEAGVPQSRDRTYIVAIMDYPSEDFYYDYRSKKIDILKSELN 273 >gi|291543312|emb|CBL16421.1| DNA-methyltransferase (dcm) [Ruminococcus sp. 18P13] Length = 668 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 15/23 (65%) Query: 1 MKACDFGVPQRRERLYIIDFLNP 23 + A FGV QRR R++++ L+ Sbjct: 177 LDAQFFGVAQRRRRMFLVGDLDG 199 >gi|224036442|pdb|3G7U|A Chain A, Crystal Structure Of Putative Dna Modification Methyltransferase Encoded Within Prophage Cp-933r (E.Coli) Length = 376 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 22/69 (31%), Gaps = 7/69 (10%) Query: 2 KACDFGVPQRRERLYIIDFLN----PSVEFKFPTPLGIKPRLGDILEEHI---DDKSTIS 54 KA D+G P R R + I + F + + D L D Sbjct: 152 KASDYGAPTIRTRYFFIGVKKSLKLDISDEVFMPKMIDPVTVKDALYGLPDIIDANWQSD 211 Query: 55 NKLWEGHQK 63 ++ W +K Sbjct: 212 SESWRTIKK 220 >gi|300777384|ref|ZP_07087242.1| DNA (cytosine-5-)-methyltransferase [Chryseobacterium gleum ATCC 35910] gi|300502894|gb|EFK34034.1| DNA (cytosine-5-)-methyltransferase [Chryseobacterium gleum ATCC 35910] Length = 351 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 35/88 (39%), Gaps = 9/88 (10%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGH 61 A ++GV QRR R I + K+ P+ + + +++K + G Sbjct: 159 DASEYGVAQRRTRAIIKLYRKDK---KWGQPIKSEK------QITVEEKIGFLPSIEAGE 209 Query: 62 QKRKENNKIAGKGFGYGLFFENSATTNT 89 Q + + + + L+ +++ T T Sbjct: 210 QSKIKWHFARKHSDNHVLWMKHTPTGKT 237 >gi|193785455|dbj|BAG54608.1| unnamed protein product [Homo sapiens] Length = 572 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 28/89 (31%), Gaps = 6/89 (6%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKF---PTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 DF +PQ R R+ ++ P +LE + K W Sbjct: 48 KDFRLPQTRRRIIMVPRKEDQTPLNPASQPQAPPKPIPSFKVLEARDIQEQPEDRKTW-- 105 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNT 89 +R + + + FG + + + T Sbjct: 106 LSQRSK-LRQELESFGDVKRWLENKPSIT 133 >gi|79835459|gb|ABB52089.1| Mod [Arthrospira platensis] Length = 390 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 2/79 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A +GVP++R R + +P+P D+ + + W Sbjct: 154 LSAHHYGVPEKRRRTIFLGNRFGVPNL-YPSPQFQD-NEPDLYFLPAAKTVGFAWENWLT 211 Query: 61 HQKRKENNKIAGKGFGYGL 79 +Q + N+ L Sbjct: 212 YQGKTYNHDPRTAQIPNHL 230 >gi|291571391|dbj|BAI93663.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39] Length = 390 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 2/79 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A +GVP++R R + +P+P D+ + + W Sbjct: 154 LSAHHYGVPEKRRRTIFLGNRFGVPNL-YPSPQFQD-NEPDLYFLPAAKTVGFAWENWLT 211 Query: 61 HQKRKENNKIAGKGFGYGL 79 +Q + N+ L Sbjct: 212 YQGKTYNHDPRTAQIPNHL 230 >gi|209523295|ref|ZP_03271851.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209496446|gb|EDZ96745.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 387 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 15/32 (46%), Gaps = 1/32 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP 32 + A +GVP++R R + +P+P Sbjct: 155 LSAHHYGVPEKRRRTIFLGNRFGVPNL-YPSP 185 >gi|223939324|ref|ZP_03631204.1| DNA-cytosine methyltransferase [bacterium Ellin514] gi|223892037|gb|EEF58518.1| DNA-cytosine methyltransferase [bacterium Ellin514] Length = 374 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 2/31 (6%) Query: 6 FGVPQRRERLYIIDFLNPSVE--FKFPTPLG 34 +GVPQRR R ++ L S + FK Sbjct: 152 YGVPQRRRRYILVGTLKGSAKAFFKLIKKQK 182 >gi|307704727|ref|ZP_07641624.1| modification methylase, putative [Streptococcus mitis SK597] gi|307621706|gb|EFO00746.1| modification methylase, putative [Streptococcus mitis SK597] Length = 426 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 15/43 (34%), Gaps = 7/43 (16%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKF-------PTPLGIK 36 + D+GVPQ R RL + + F P K Sbjct: 168 INMADYGVPQNRVRLLTVFSRTKKGKRYFAYNKTFIPEQTHSK 210 >gi|254672007|emb|CBA04511.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis alpha275] gi|261391820|emb|CAX49276.1| putative modification methylase (cytosine-specific methyltransferase) [Neisseria meningitidis 8013] Length = 862 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 24/97 (24%), Gaps = 6/97 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK----FPTPLGIKPRLGDILEEHIDDKSTISNK 56 + D+G R R +I FP P+ L + + Sbjct: 200 LNFKDYGANSSRTRTLVIGVRKDIHHITPYDIFPKQTP--PKTLRTLLADLPPLMQMGEI 257 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + L SA NT AR Sbjct: 258 SDDDIYHSYREFDRRMLPWIAQLKEGESAFQNTDPAR 294 >gi|119599662|gb|EAW79256.1| chromosome 3 open reading frame 25, isoform CRA_a [Homo sapiens] Length = 573 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 28/89 (31%), Gaps = 6/89 (6%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKF---PTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 DF +PQ R R+ ++ P +LE + K W Sbjct: 48 KDFRLPQTRRRIIMVPRKEDQTPLNPASQPQAPPKPIPSFKVLEARDIQEQPEDRKTW-- 105 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNT 89 +R + + + FG + + + T Sbjct: 106 LSQRSK-LRQELESFGDVKRWLENKPSIT 133 >gi|46409260|ref|NP_997190.1| EF-hand domain-containing protein C3orf25 [Homo sapiens] gi|74736979|sp|Q6NXP0|CC025_HUMAN RecName: Full=EF-hand domain-containing protein C3orf25 gi|44890777|gb|AAH66975.1| Chromosome 3 open reading frame 25 [Homo sapiens] gi|119599663|gb|EAW79257.1| chromosome 3 open reading frame 25, isoform CRA_b [Homo sapiens] gi|325463687|gb|ADZ15614.1| chromosome 3 open reading frame 25 [synthetic construct] Length = 572 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 28/89 (31%), Gaps = 6/89 (6%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKF---PTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 DF +PQ R R+ ++ P +LE + K W Sbjct: 48 KDFRLPQTRRRIIMVPRKEDQTPLNPASQPQAPPKPIPSFKVLEARDIQEQPEDRKTW-- 105 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNT 89 +R + + + FG + + + T Sbjct: 106 LSQRSK-LRQELESFGDVKRWLENKPSIT 133 >gi|258611549|ref|ZP_05233453.2| methylase [Listeria monocytogenes FSL N3-165] gi|258601173|gb|EEW14498.1| methylase [Listeria monocytogenes FSL N3-165] Length = 469 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 3/61 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A ++G QRR R++ + N + K+ + K + E ++D SN+ Sbjct: 168 INAAEYGRAQRRRRVFFFVYRNDT---KWAKRIDEKYENDKLEEGLLEDIVIASNRYDNY 224 Query: 61 H 61 Sbjct: 225 I 225 >gi|159041947|ref|YP_001541199.1| DNA-cytosine methyltransferase [Caldivirga maquilingensis IC-167] gi|157920782|gb|ABW02209.1| DNA-cytosine methyltransferase [Caldivirga maquilingensis IC-167] Length = 309 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 24/73 (32%), Gaps = 6/73 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A D+GVP R R++I + + P G + + L + I N Sbjct: 149 LHAEDYGVPSIRRRVFISNIVIK------PPKAGKVITVAEALSGLPEPTPLIPNHEPVT 202 Query: 61 HQKRKENNKIAGK 73 RK Sbjct: 203 VSGRKIKGISRVN 215 >gi|62946656|gb|AAY22439.1| methylase [Listeria monocytogenes] Length = 469 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 3/61 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A ++G QRR R++ + N + K+ + K + E ++D SN+ Sbjct: 168 INAAEYGRAQRRRRVFFFVYRNDT---KWAKRIDEKYENDKLEEGLLEDIVIASNRYDNY 224 Query: 61 H 61 Sbjct: 225 I 225 >gi|325197576|gb|ADY93032.1| Modification methylase HgaIA [Neisseria meningitidis G2136] Length = 862 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 24/97 (24%), Gaps = 6/97 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK----FPTPLGIKPRLGDILEEHIDDKSTISNK 56 + D+G R R +I FP P+ L + + Sbjct: 200 LNFKDYGANSSRTRTLVIGVRKDIHHITPYDIFPKQTP--PKTLRTLLADLPPLMQMGEI 257 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + L SA NT AR Sbjct: 258 SDDDIYHSYREFDRRMLPWIAQLKEGESAFQNTDPAR 294 >gi|307106990|gb|EFN55234.1| hypothetical protein CHLNCDRAFT_52630 [Chlorella variabilis] Length = 1211 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 14/35 (40%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 + A +FGVPQ R R ++ P P Sbjct: 627 LAAGNFGVPQGRWRCFLWAAAPGQQLPAIPKPTHN 661 >gi|15801798|ref|NP_287816.1| putative DNA modification methyltransferase encoded within prophage CP-933R [Escherichia coli O157:H7 EDL933] gi|15831207|ref|NP_309980.1| methyltransferase [Escherichia coli O157:H7 str. Sakai] gi|217329077|ref|ZP_03445157.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. TW14588] gi|12515382|gb|AAG56430.1|AE005370_3 putative DNA modification methyltransferase encoded within prophage CP-933R [Escherichia coli O157:H7 str. EDL933] gi|13361418|dbj|BAB35376.1| putative methyltransferase [Escherichia coli O157:H7 str. Sakai] gi|217317516|gb|EEC25944.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. TW14588] gi|323179669|gb|EFZ65230.1| modification methylase XorII [Escherichia coli 1180] gi|326343203|gb|EGD66970.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. 1044] Length = 383 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 24/72 (33%), Gaps = 7/72 (9%) Query: 2 KACDFGVPQRRERLYIIDFLN----PSVEFKFPTPLGIKPRLGDILEEHI---DDKSTIS 54 KA D+G P R R + I + F + + D L D Sbjct: 150 KASDYGAPTIRTRYFFIGVKKSLKLDISDEVFMPKMIDPVTVKDALYGLPDIIDANWQSD 209 Query: 55 NKLWEGHQKRKE 66 ++ W +K ++ Sbjct: 210 SESWRTIKKDRK 221 >gi|325143130|gb|EGC65477.1| Modification methylase HgaIA [Neisseria meningitidis 961-5945] Length = 862 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 24/97 (24%), Gaps = 6/97 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK----FPTPLGIKPRLGDILEEHIDDKSTISNK 56 + D+G R R +I FP P+ L + + Sbjct: 200 LNFKDYGANSSRTRTLVIGVRKDIHHITPYDIFPKQTP--PKTLRTLLADLPPLMQMGEI 257 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + L SA NT AR Sbjct: 258 SDDDIYHSYREFDRRMLPWIAQLKEGESAFQNTDPAR 294 >gi|325203406|gb|ADY98859.1| Modification methylase HgaIA [Neisseria meningitidis M01-240355] Length = 862 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 24/97 (24%), Gaps = 6/97 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK----FPTPLGIKPRLGDILEEHIDDKSTISNK 56 + D+G R R +I FP P+ L + + Sbjct: 200 LNFKDYGANSSRTRTLVIGVRKDIHHITPYDIFPKQTP--PKTLRTLLADLPPLMQMGEI 257 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + L SA NT AR Sbjct: 258 SDDDIYHSYREFDPRMLPWIAQLKEGESAFQNTDPAR 294 >gi|168070728|ref|XP_001786917.1| predicted protein [Physcomitrella patens subsp. patens] gi|162660176|gb|EDQ48269.1| predicted protein [Physcomitrella patens subsp. patens] Length = 290 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 9/14 (64%), Positives = 10/14 (71%) Query: 1 MKACDFGVPQRRER 14 + A DFGVPQ R R Sbjct: 277 INAMDFGVPQNRNR 290 >gi|291614414|ref|YP_003524571.1| C-5 cytosine-specific DNA methylase [Sideroxydans lithotrophicus ES-1] gi|291584526|gb|ADE12184.1| C-5 cytosine-specific DNA methylase [Sideroxydans lithotrophicus ES-1] Length = 609 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 16/37 (43%), Gaps = 1/37 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 ++A D+ P R+RL+++ +P P Sbjct: 175 LRASDYDTPTIRKRLFLVA-RCDGQPIVWPEATHGAP 210 >gi|309379751|emb|CBX21527.1| putative DNA cytosine methyltransferase [Neisseria lactamica Y92-1009] Length = 612 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 24/97 (24%), Gaps = 6/97 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFK----FPTPLGIKPRLGDILEEHIDDKSTISNK 56 + D+G R R +I FP P+ L + + Sbjct: 200 LNFKDYGANSSRTRTLVIGVRKDIHHITPYDIFPKQTP--PKTLRTLLADLPPLMQMGEI 257 Query: 57 LWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSAR 93 + + L SA NT AR Sbjct: 258 SDDDIYHSYREFDRRMLPWIAQLKEGESAFHNTDPAR 294 >gi|300689724|ref|YP_003750719.1| DNA (cytosine-5-)-methyltransferase [Ralstonia solanacearum PSI07] gi|299076784|emb|CBJ49392.1| putative DNA (cytosine-5-)-methyltransferase [Ralstonia solanacearum PSI07] Length = 540 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 11/87 (12%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKF------PTPLGIKPRLGDILEEHIDDKSTISNKLWE 59 +G+PQ R R+ ++ + + P+ ++ +GD+ S + W Sbjct: 232 YGIPQSRHRVILLGVRKGAGLLQHRLLTGVDKPVTVRHAIGDLPRIRSRLSRGDSLEAW- 290 Query: 60 GHQKRKENNKIAGKGFGYGLFFENSAT 86 R G+G E + Sbjct: 291 ----RAAVQMGPSYVKGWGREDEPNMV 313 >gi|225427443|ref|XP_002267685.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1586 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 14/29 (48%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 +G+PQ R R+++ +FP P Sbjct: 1293 YGLPQFRLRVFLWGAHPGESLPQFPLPTH 1321 >gi|222624499|gb|EEE58631.1| hypothetical protein OsJ_09996 [Oryza sativa Japonica Group] Length = 1033 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 16/32 (50%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 A +G+PQ R R ++ L V KFP P Sbjct: 713 AGYYGLPQFRMRAFLWGALPSMVLPKFPLPTH 744 >gi|167761084|ref|ZP_02433211.1| hypothetical protein CLOSCI_03482 [Clostridium scindens ATCC 35704] gi|167661318|gb|EDS05448.1| hypothetical protein CLOSCI_03482 [Clostridium scindens ATCC 35704] Length = 405 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 7/63 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-------VEFKFPTPLGIKPRLGDILEEHIDDKSTI 53 + FGVPQ RER+ I+ P+ + F + + +D K I Sbjct: 166 LSPHHFGVPQLRERVVILGKYEPNRVDEPLDIVFHDLIKKEQNSIYDVVKDHPVDKKYAI 225 Query: 54 SNK 56 S Sbjct: 226 SEH 228 >gi|218895987|ref|YP_002444398.1| modification methylase DdeI [Bacillus cereus G9842] gi|218542827|gb|ACK95221.1| modification methylase DdeI [Bacillus cereus G9842] Length = 468 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 12/24 (50%) Query: 2 KACDFGVPQRRERLYIIDFLNPSV 25 DFG PQ R R++ + ++ Sbjct: 232 NTKDFGYPQNRNRVFWLGIKTTNI 255 >gi|219871979|ref|YP_002476354.1| moodification methylase HgaIA [Haemophilus parasuis SH0165] gi|219692183|gb|ACL33406.1| moodification methylase HgaIA (M.HgaIA) (Cytosine-specific methyltransferase HgaIA) (M.HgaI-1) [Haemophilus parasuis SH0165] Length = 358 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP---LGIKPRLGDILEEHIDD----KSTI 53 + A D+G+ Q R R II + +K PT + ++ +G + + K Sbjct: 161 LNAKDYGICQSRPRA-IIKMYKYGITWKLPTIQAEISLQRAIGHLPPLEPGEVSSIKWHS 219 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA 85 + + + + K +F+ Sbjct: 220 APNVKPSIIEAIRHTKPGTSAISNPIFYPKKD 251 >gi|239622763|ref|ZP_04665794.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239514760|gb|EEQ54627.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 507 Score = 35.4 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 12/21 (57%) Query: 3 ACDFGVPQRRERLYIIDFLNP 23 A +G+PQ R R+ ++ N Sbjct: 231 AECYGIPQARHRVILLGVRND 251 >gi|298505465|gb|ADI84188.1| DNA cytosine methyltransferase family protein [Geobacter sulfurreducens KN400] Length = 444 Score = 35.4 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 11/19 (57%) Query: 6 FGVPQRRERLYIIDFLNPS 24 +G+PQ R R+ ++ N Sbjct: 176 YGIPQTRHRVILLGIRNDL 194 >gi|255579031|ref|XP_002530367.1| protein with unknown function [Ricinus communis] gi|223530114|gb|EEF32028.1| protein with unknown function [Ricinus communis] Length = 845 Score = 35.4 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID 48 A +G+PQ R R+++ ++P P G I E + Sbjct: 547 AGSYGLPQFRMRVFMWGSQPSESLPQYPLPTHEVVVKGGIPNEFEE 592 >gi|219122422|ref|XP_002181544.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406820|gb|EEC46758.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 495 Score = 35.4 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 32/91 (35%), Gaps = 9/91 (9%) Query: 8 VPQRRERLYIIDFLN----PSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQK 63 V R+RL+ + + F+FP + R D+LE ++ + + Sbjct: 287 VATSRKRLFFVGLRRQQGIENAPFEFPFIPDLGFRGVDVLEY----CDITNDTILRINDD 342 Query: 64 RKENNKIAGKGFGYGLFFENSATTNTLSARY 94 + + L + N+ TL + Y Sbjct: 343 QMDRLSREKYWKPAHLAWPNT-VCQTLVSHY 372 >gi|313886494|ref|ZP_07820210.1| DNA (cytosine-5-)-methyltransferase [Porphyromonas asaccharolytica PR426713P-I] gi|312924040|gb|EFR34833.1| DNA (cytosine-5-)-methyltransferase [Porphyromonas asaccharolytica PR426713P-I] Length = 351 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 5 DFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP-RLGDILEEHIDDKSTISNKLWEGHQK 63 D+G+PQ R+RL ++ + PT + D + + ++ +++ H+ Sbjct: 155 DYGIPQNRKRLVLLASKFGEISLIPPTHKPSNYLTVKDAIGDLPALRAGEADRYDPLHRS 214 Query: 64 RKENN 68 + + Sbjct: 215 KSLSP 219 >gi|226088550|dbj|BAH37020.1| chromomethylase OsMET2b [Oryza sativa Japonica Group] Length = 690 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 16/32 (50%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 A +G+PQ R R ++ L V KFP P Sbjct: 431 AGYYGLPQFRMRAFLWGALPSMVLPKFPLPTH 462 >gi|332664528|ref|YP_004447316.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM 1100] gi|332333342|gb|AEE50443.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM 1100] Length = 420 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 8/18 (44%), Positives = 13/18 (72%) Query: 3 ACDFGVPQRRERLYIIDF 20 A +FGV Q R+R+ I+ + Sbjct: 195 AINFGVLQNRKRIIILGW 212 >gi|110288523|gb|ABB46585.2| DNA cytosine methyltransferase MET2a, putative, expressed [Oryza sativa Japonica Group] Length = 371 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 16/30 (53%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 +G+PQ R R+++ L V K+P P Sbjct: 57 YGLPQFRMRVFLWGALPTMVLPKYPLPTHN 86 >gi|189199258|ref|XP_001935966.1| C-5 cytosine methyltransferase DmtA [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983065|gb|EDU48553.1| C-5 cytosine methyltransferase DmtA [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 744 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 13/28 (46%) Query: 7 GVPQRRERLYIIDFLNPSVEFKFPTPLG 34 G+ Q+R RL II + FP P Sbjct: 467 GLVQKRMRLLIIAARRGTPLPPFPKPTH 494 >gi|127454|sp|P25283|MTG2_HAEGA RecName: Full=Modification methylase HgaIB; Short=M.HgaIB; AltName: Full=Cytosine-specific methyltransferase HgaIB; AltName: Full=M.HgaI-2 gi|216712|dbj|BAA14378.1| HgaI methylase [Avibacterium paragallinarum] gi|435624|dbj|BAA04207.1| HgaI methylase 2 [Avibacterium paragallinarum] gi|1090539|prf||2019268B HgaI restriction methylase:ISOTYPE=2 Length = 358 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 8/92 (8%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTP---LGIKPRLGDILEEHIDD----KSTI 53 + A D+G+ Q R R II + +K PT + ++ +G + + K Sbjct: 161 LNAKDYGICQSRPRA-IIKMYKYGITWKLPTIQAEISLQRAIGHLPPLEPGEVSSIKWHS 219 Query: 54 SNKLWEGHQKRKENNKIAGKGFGYGLFFENSA 85 + + + + K +F+ Sbjct: 220 APNVKPSIIEAIRHTKPGTSAISNPIFYPKKD 251 >gi|296088422|emb|CBI37413.3| unnamed protein product [Vitis vinifera] Length = 729 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 14/29 (48%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 +G+PQ R R+++ +FP P Sbjct: 436 YGLPQFRLRVFLWGAHPGESLPQFPLPTH 464 >gi|159461700|gb|ABW96889.1| CMT-type DNA-methyltransferase [Elaeis guineensis] Length = 925 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 15/29 (51%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 +G+PQ R R+++ + +FP P Sbjct: 618 YGLPQFRMRVFLWGACPTEILPQFPLPTH 646 >gi|8489198|gb|AAF75616.1|AF216814_7 5-methylcytosine methyltransferase [Lactococcus lactis subsp. lactis bv. diacetylactis] gi|3702801|gb|AAC77904.1| LlaKR2I methylase enzyme [Lactococcus lactis] Length = 420 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 32/87 (36%), Gaps = 3/87 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A ++G QRR R++ + N + F + + DI+ + I + Sbjct: 159 INAAEYGRSQRRRRVFFFVYRNDT---DFAQKIDKQFETEDIVFDDNRYDDYIYHSGLFA 215 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATT 87 Q ++ + + Y L + + Sbjct: 216 TQFPIKSIPVKNRQVYYELPEDIVEVS 242 >gi|228471277|ref|ZP_04056083.1| modification methylase HgiDII [Porphyromonas uenonis 60-3] gi|228306919|gb|EEK16017.1| modification methylase HgiDII [Porphyromonas uenonis 60-3] Length = 351 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 1/44 (2%) Query: 5 DFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP-RLGDILEEHI 47 D+G+PQ R+RL ++ + PT + D + + Sbjct: 155 DYGIPQNRKRLVLLASKFGEISLIPPTHKPSNYLTVKDAIGDLP 198 >gi|323693327|ref|ZP_08107545.1| hypothetical protein HMPREF9475_02408 [Clostridium symbiosum WAL-14673] gi|323502810|gb|EGB18654.1| hypothetical protein HMPREF9475_02408 [Clostridium symbiosum WAL-14673] Length = 536 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 4/58 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPT---PLGIKPRLGDILEEHIDDKSTIS 54 + A FG PQ+R R ++ + K P G + D +++ D + + Sbjct: 318 LSATQFGAPQKRMRFVVMGIRKDIADAVKLPEGKYKNGPYRTVEDAIKDLEDVEPVYN 375 >gi|116251696|ref|YP_767534.1| modification methylase [Rhizobium leguminosarum bv. viciae 3841] gi|115256344|emb|CAK07425.1| putative modification methylase [Rhizobium leguminosarum bv. viciae 3841] Length = 666 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 4/60 (6%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVE-FKFPTPLGIKPRL--GDILEEHIDDKSTISNKLWE 59 A D+GV Q R R+ + ++ F+ P P R GD+L + + K W Sbjct: 438 AEDYGVAQERTRMLFVGLRQGAMSAFRAP-PTFPHWRSNLGDVLGDLMAANGWTGAKDWA 496 >gi|115480860|ref|NP_001064023.1| Os10g0104900 [Oryza sativa Japonica Group] gi|113638632|dbj|BAF25937.1| Os10g0104900 [Oryza sativa Japonica Group] Length = 406 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 16/30 (53%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 +G+PQ R R+++ L V K+P P Sbjct: 92 YGLPQFRMRVFLWGALPTMVLPKYPLPTHN 121 >gi|109098037|ref|XP_001094977.1| PREDICTED: EF-hand domain-containing protein C3orf25 homolog isoform 2 [Macaca mulatta] Length = 569 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 26/89 (29%), Gaps = 6/89 (6%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKF---PTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 DF +PQ R R+ ++ P LE + K W Sbjct: 48 KDFRLPQTRRRIIMVPRKEDQTPINPASQPQAPPEPIPSFKALEAKDIQEQPEDRKTW-- 105 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNT 89 R+ + + FG + + + T Sbjct: 106 -LSRRAKLRQELESFGDVKRWLENKPSIT 133 >gi|328956110|ref|YP_004373443.1| DNA-cytosine methyltransferase [Coriobacterium glomerans PW2] gi|328456434|gb|AEB07628.1| DNA-cytosine methyltransferase [Coriobacterium glomerans PW2] Length = 513 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 4/83 (4%) Query: 2 KACDFGVPQRRERLYIIDFL-NPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNK---L 57 A +G+PQ R R+ ++ + S+ TP + + D L +S S + + Sbjct: 227 DAERYGIPQARHRVVLLGLRSHSSLTPSILTPRFAEKTVRDALTGIPPVRSGFSKRSGNM 286 Query: 58 WEGHQKRKENNKIAGKGFGYGLF 80 E Q+ + G G Sbjct: 287 RESWQRYIAHAAKRLAGTAEGRA 309 >gi|302521590|ref|ZP_07273932.1| DNA-cytosine methyltransferase [Streptomyces sp. SPB78] gi|302430485|gb|EFL02301.1| DNA-cytosine methyltransferase [Streptomyces sp. SPB78] Length = 322 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 2/61 (3%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPTPL-GIKPRLGDILEEHIDDKSTISNKLW 58 + A DFGV Q R+ ++ P + F P P +G +L + + W Sbjct: 149 LNAADFGVAQDRKHGVLVALGKPWADRFVPPAPTVSRHASVGSVLRRSMRSRGWPGADEW 208 Query: 59 E 59 Sbjct: 209 A 209 >gi|75048729|sp|Q95LL8|CC025_MACFA RecName: Full=EF-hand domain-containing protein C3orf25 homolog gi|16041144|dbj|BAB69739.1| hypothetical protein [Macaca fascicularis] Length = 569 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 26/89 (29%), Gaps = 6/89 (6%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKF---PTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 DF +PQ R R+ ++ P LE + K W Sbjct: 48 KDFRLPQTRRRIIMVPRKEDQTPINPASQPQAPPEPIPSFKALEAKDIQEQPEDRKTW-- 105 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNT 89 R+ + + FG + + + T Sbjct: 106 -LSRRAKLRQELESFGDVKRWLENKPSIT 133 >gi|68655470|emb|CAJ01708.1| chromomethylase 1 [Hordeum vulgare subsp. vulgare] Length = 735 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 16/29 (55%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLG 34 +G+PQ R R+++ L V K+P P Sbjct: 420 YGLPQFRMRVFLWGSLPTMVLPKYPLPTH 448 >gi|330932388|ref|XP_003303757.1| hypothetical protein PTT_16100 [Pyrenophora teres f. teres 0-1] gi|311320036|gb|EFQ88154.1| hypothetical protein PTT_16100 [Pyrenophora teres f. teres 0-1] Length = 762 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 13/28 (46%) Query: 7 GVPQRRERLYIIDFLNPSVEFKFPTPLG 34 G+ Q+R RL II + FP P Sbjct: 466 GLVQKRMRLLIIAARRGTPLPPFPKPTH 493 >gi|332231799|ref|XP_003265082.1| PREDICTED: LOW QUALITY PROTEIN: EF-hand domain-containing protein C3orf25-like [Nomascus leucogenys] Length = 572 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 26/89 (29%), Gaps = 6/89 (6%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKF---PTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 DF +PQ R R+ ++ P LE + K W Sbjct: 48 KDFRLPQTRRRIIMLPHKEDQTPINPASQPQAPPKPIPSFKALEARDIQEQPEDRKTW-- 105 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNT 89 R+ + + FG + + + T Sbjct: 106 -LSRRAKLRQELESFGDVKRWLENKPSIT 133 >gi|114589099|ref|XP_001143287.1| PREDICTED: EF-hand domain-containing protein C3orf25-like [Pan troglodytes] Length = 572 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 28/89 (31%), Gaps = 6/89 (6%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKF---PTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 DF +PQ R R+ ++ P +LE + K W Sbjct: 48 KDFRLPQTRRRIIMVPRKEDQTPINPASQPQAPPKPIPSFKVLEARDIQEQPEDRKTW-- 105 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNT 89 +R + + + FG + + + T Sbjct: 106 LSQRSK-LRQELESFGDVKRWLENKPSIT 133 >gi|289422787|ref|ZP_06424624.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus anaerobius 653-L] gi|289156786|gb|EFD05414.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus anaerobius 653-L] Length = 536 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 4/58 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE-FKFPT---PLGIKPRLGDILEEHIDDKSTIS 54 + A FG PQ+R R ++ + K P G + D +++ D + + Sbjct: 318 LSATQFGAPQKRMRFVVMGIRKDIADVVKLPEGKYKDGPYRTVEDAIKDLEDVEPVYN 375 >gi|316977147|gb|EFV60295.1| putative type II DNA modification methyltransferase [Trichinella spiralis] Length = 298 Score = 35.0 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 31/96 (32%), Gaps = 1/96 (1%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + DFG+P R+R Y+I + ++ + + + E Sbjct: 145 LDPYDFGIPNHRKRAYLIAEHESVDDLVAVDACEQLSNCPKVVCSKPISEFLCTLQETE- 203 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLSARYYK 96 QK ++ + + ++N + Y + Sbjct: 204 LQKYLVPERLLIHKDCMDIVCRDDTSSNCFTKGYGR 239 >gi|302785127|ref|XP_002974335.1| hypothetical protein SELMODRAFT_30570 [Selaginella moellendorffii] gi|300157933|gb|EFJ24557.1| hypothetical protein SELMODRAFT_30570 [Selaginella moellendorffii] Length = 773 Score = 35.0 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 19/44 (43%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEH 46 A +G+PQ R R+++ + FP P G++ + Sbjct: 486 AGSYGLPQFRMRVFLWGAAPSEMLPAFPLPTHDAIYKGNVPNQF 529 >gi|312114242|ref|YP_004011838.1| DNA-cytosine methyltransferase [Rhodomicrobium vannielii ATCC 17100] gi|311219371|gb|ADP70739.1| DNA-cytosine methyltransferase [Rhodomicrobium vannielii ATCC 17100] Length = 363 Score = 35.0 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 18/48 (37%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHID 48 + DFG+ Q R RL ++ + PT + D + E Sbjct: 167 LYGPDFGLAQTRSRLVLLASRRGPILLPTPTHKDNYRTVMDEIGELPP 214 >gi|213024445|ref|ZP_03338892.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 137 Score = 35.0 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 3/39 (7%) Query: 8 VPQRRERLYIIDFLNP---SVEFKFPTPLGIKPRLGDIL 43 +PQ RER+ ++ F +F P L Sbjct: 94 LPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTL 132 >gi|224011395|ref|XP_002295472.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|209583503|gb|ACI64189.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 738 Score = 35.0 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 6/55 (10%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG------IKPRLGDILEEHIDDKS 51 AC FG PQ RER+ ++ P GD+L + K Sbjct: 568 ACAFGDPQNRERVILLAAKKGYKLPSAPAATHGKHGLEPIVTTGDVLSDLEGIKP 622 >gi|112983066|ref|NP_001036934.1| DNA cytosine-5 methyltransferase [Bombyx mori] gi|54888741|dbj|BAD67190.1| DNA cytosine-5 methyltransferase [Bombyx mori] Length = 336 Score = 35.0 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 8/60 (13%) Query: 7 GVPQRRERLYIIDFLNPSVEFK--------FPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 GVP R R Y I N + FK P L DI+E ++ D + +K+ Sbjct: 157 GVPNSRLRYYCIAKRNNTWNFKRKDELITCLPKTFAKPHCLKDIIENNVPDDYLVPDKML 216 >gi|325845888|ref|ZP_08169086.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481794|gb|EGC84826.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 434 Score = 35.0 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 13/22 (59%) Query: 1 MKACDFGVPQRRERLYIIDFLN 22 + A ++ +PQRR R++I Sbjct: 170 INAGEYSMPQRRRRIFIFASKK 191 >gi|297800866|ref|XP_002868317.1| hypothetical protein ARALYDRAFT_355413 [Arabidopsis lyrata subsp. lyrata] gi|297314153|gb|EFH44576.1| hypothetical protein ARALYDRAFT_355413 [Arabidopsis lyrata subsp. lyrata] Length = 1506 Score = 35.0 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG 40 ++A +G+ Q R+R +I V ++P P+ + G Sbjct: 1243 LEAGAYGISQPRKRAFIWAAAPNEVLPEWPEPMHVFNNPG 1282 >gi|299145766|ref|ZP_07038834.1| putative C-5 cytosine-specific DNA methylase [Bacteroides sp. 3_1_23] gi|298516257|gb|EFI40138.1| putative C-5 cytosine-specific DNA methylase [Bacteroides sp. 3_1_23] Length = 545 Score = 34.6 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 1/42 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 + + D+G R+R + I F S+ FP K + Sbjct: 175 LNSADYGAYTSRKRFFGI-FAKGSLPIVFPEQTHSKKPDPKL 215 >gi|226088548|dbj|BAH37019.1| chromomethylase OsMET2a [Oryza sativa Japonica Group] Length = 907 Score = 34.6 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 16/30 (53%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 +G+PQ R R+++ L V K+P P Sbjct: 593 YGLPQFRMRVFLWGALPTMVLPKYPLPTHN 622 >gi|218188370|gb|EEC70797.1| hypothetical protein OsI_02246 [Oryza sativa Indica Group] Length = 907 Score = 34.6 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 16/30 (53%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 +G+PQ R R+++ L V K+P P Sbjct: 593 YGLPQFRMRVFLWGALPTMVLPKYPLPTHN 622 >gi|222612319|gb|EEE50451.1| hypothetical protein OsJ_30466 [Oryza sativa Japonica Group] Length = 907 Score = 34.6 bits (78), Expect = 4.3, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 16/30 (53%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 +G+PQ R R+++ L V K+P P Sbjct: 593 YGLPQFRMRVFLWGALPTMVLPKYPLPTHN 622 >gi|255530843|ref|YP_003091215.1| DNA-cytosine methyltransferase [Pedobacter heparinus DSM 2366] gi|255343827|gb|ACU03153.1| DNA-cytosine methyltransferase [Pedobacter heparinus DSM 2366] Length = 474 Score = 34.6 bits (78), Expect = 4.3, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 4/36 (11%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK 36 + A +F +PQ R+R +I F F + Sbjct: 251 LDAQNFDIPQSRKRYILIGGK----NFMFIEQIKKN 282 >gi|261339110|ref|ZP_05966968.1| hypothetical protein ENTCAN_05324 [Enterobacter cancerogenus ATCC 35316] gi|288318947|gb|EFC57885.1| modification methylase HgiDII [Enterobacter cancerogenus ATCC 35316] Length = 355 Score = 34.6 bits (78), Expect = 4.4, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 3/49 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP-RLGDILEEHID 48 ++ D+GVPQ R+R ++ K P + R G + + Sbjct: 151 LQVADYGVPQDRKRFVLLA--GHGFTIKIPEATHSRDGRDGTLPWNTVK 197 >gi|154302575|ref|XP_001551697.1| hypothetical protein BC1G_09864 [Botryotinia fuckeliana B05.10] gi|150855353|gb|EDN30545.1| hypothetical protein BC1G_09864 [Botryotinia fuckeliana B05.10] Length = 1126 Score = 34.6 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 24/73 (32%), Gaps = 12/73 (16%) Query: 4 CDFGVPQRRERLYIID--------FLNPSVEFKFPTP--LGIKPRLGDILEEHIDDKSTI 53 +G+PQRR RL II + P F P+P + L E Sbjct: 888 AQWGLPQRRFRLIIIASCPGEPLPPMPPPTHFSHPSPNNTKSFKTVFQTLHEIPKSAENH 947 Query: 54 SNKLW--EGHQKR 64 S L + + Sbjct: 948 SPHLLPEKDLKPY 960 >gi|228962260|ref|ZP_04123693.1| Phage-related DNA methylase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228797429|gb|EEM44609.1| Phage-related DNA methylase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 180 Score = 34.6 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 13/24 (54%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS 24 + + + GV Q R R++I+ L Sbjct: 150 INSTECGVDQNRTRIFIVGHLRGH 173 >gi|168205340|ref|ZP_02631345.1| putative modification methylase Eco47II [Clostridium perfringens E str. JGS1987] gi|170663208|gb|EDT15891.1| putative modification methylase Eco47II [Clostridium perfringens E str. JGS1987] Length = 437 Score = 34.6 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 28/94 (29%), Gaps = 14/94 (14%) Query: 12 RERLYIIDFLNPSVEFK-----FPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQKRK- 65 R+R++I+ F+ P + + + D + ++ E + K Sbjct: 273 RKRVFIVGSKIGKANFEILKKFIPKTVKRALDKVNEEWFNFSDITIPKSETIEKIKNIKQ 332 Query: 66 --------ENNKIAGKGFGYGLFFENSATTNTLS 91 + + G E + T++ Sbjct: 333 GENFMAIPKAIRGKGNHSNRCRRLEEDKPSCTIT 366 >gi|284050005|ref|ZP_06380215.1| DNA (cytosine-5-)-methyltransferase [Arthrospira platensis str. Paraca] Length = 321 Score = 34.6 bits (78), Expect = 4.6, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 2/79 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A +GVP++R R + +P+P D+ + + W Sbjct: 85 LSAHHYGVPEKRRRTIFLGNRFGVPNL-YPSPQFQD-NEPDLYFLPAAKTVGFAWENWLT 142 Query: 61 HQKRKENNKIAGKGFGYGL 79 +Q + N+ L Sbjct: 143 YQGKTYNHDPRTAQIPNHL 161 >gi|113478034|ref|YP_724095.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] gi|110169082|gb|ABG53622.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] Length = 413 Score = 34.6 bits (78), Expect = 4.6, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 12/19 (63%) Query: 1 MKACDFGVPQRRERLYIID 19 + +F +PQ R+R++I Sbjct: 172 INPINFSIPQNRDRIFIFG 190 >gi|294776807|ref|ZP_06742270.1| DNA (cytosine-5-)-methyltransferase [Bacteroides vulgatus PC510] gi|294449283|gb|EFG17820.1| DNA (cytosine-5-)-methyltransferase [Bacteroides vulgatus PC510] Length = 334 Score = 34.6 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 34/98 (34%), Gaps = 3/98 (3%) Query: 4 CDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEGHQK 63 FG+PQRR R +I + + + + + +T+ + + Q Sbjct: 105 SKFGIPQRRNRFILIGIQKSLGSPDQFEEMLESHKNKFLKSKGLTTSTTLKEAISDLLQS 164 Query: 64 RKENNKIAGKGFGYGLFFENSATTNTLSARYYKDGSEI 101 E KGF G++ + L Y +EI Sbjct: 165 NGEIPTPDRKGFKSGIYGAEESDYQKLLRTDY---AEI 199 >gi|297804976|ref|XP_002870372.1| hypothetical protein ARALYDRAFT_355455 [Arabidopsis lyrata subsp. lyrata] gi|297316208|gb|EFH46631.1| hypothetical protein ARALYDRAFT_355455 [Arabidopsis lyrata subsp. lyrata] Length = 1496 Score = 34.6 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG 40 ++A +G+ Q R+R +I V ++P P+ + G Sbjct: 1223 LEAGAYGISQPRKRAFIWAAAPNEVLPEWPEPMHVFNNPG 1262 >gi|296501658|ref|YP_003663358.1| type II restriction-modification system methylation subunit [Bacillus thuringiensis BMB171] gi|296322710|gb|ADH05638.1| Type II restriction-modification system methylation subunit [Bacillus thuringiensis BMB171] Length = 602 Score = 34.6 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 35/96 (36%), Gaps = 12/96 (12%) Query: 3 ACDFGVPQRRERLYIIDFLN---PSVEFKFPTP-LGIKPRLGDI---LEEHIDDKSTISN 55 + D+ VPQ+R+R I+ + E KFP I + D LE KST S+ Sbjct: 377 SNDYFVPQKRQRFMILGIKSSATQYKEIKFPERYTEIDFTVRDAIADLEGITPAKSTESH 436 Query: 56 KLWEGHQKRKENNKI-----AGKGFGYGLFFENSAT 86 K+ + K + Y +S Sbjct: 437 KIDYNIELNKTVMQHYYRSGMNHNVIYNHINTDSEP 472 >gi|260664324|ref|ZP_05865177.1| DNA-cytosine methyltransferase [Lactobacillus jensenii SJ-7A-US] gi|260562210|gb|EEX28179.1| DNA-cytosine methyltransferase [Lactobacillus jensenii SJ-7A-US] Length = 298 Score = 34.6 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 1/24 (4%) Query: 8 VPQRRERLYIID-FLNPSVEFKFP 30 VPQ RER+YII FP Sbjct: 156 VPQNRERIYIIGRLRKECTSQIFP 179 >gi|265763529|ref|ZP_06092097.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 2_1_16] gi|263256137|gb|EEZ27483.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 2_1_16] Length = 545 Score = 34.6 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 1/42 (2%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 + + D+G R+R + I F S+ FP K + Sbjct: 175 LNSADYGAYTSRKRFFGI-FAKGSLPIVFPEQTHSKKPDQKL 215 >gi|262363457|gb|ACY60178.1| putative hemolysin HlyA [Yersinia pestis D106004] Length = 1635 Score = 34.6 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 2/66 (3%) Query: 33 LGIKPRLGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + ++ + + +S+K+ +++ + L E + T+S Sbjct: 1414 SHSNAKQDSLISQVANASPIMSDKIKNKLEEKSTKIFDKVENKFNTLGKEKDDSVQTIS- 1472 Query: 93 RYYKDG 98 Y KDG Sbjct: 1473 -YTKDG 1477 >gi|170022624|ref|YP_001719129.1| hemolysin [Yersinia pseudotuberculosis YPIII] gi|169749158|gb|ACA66676.1| hemolysin [Yersinia pseudotuberculosis YPIII] Length = 261 Score = 34.6 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 2/66 (3%) Query: 33 LGIKPRLGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + ++ + + +S+K+ +++ + L E + T+S Sbjct: 40 SHSNAKQDSLISQVANASPIMSDKIKNKLEEKSTKIFDKVENKFNTLGKEKDDSVQTIS- 98 Query: 93 RYYKDG 98 Y KDG Sbjct: 99 -YTKDG 103 >gi|22123943|ref|NP_667366.1| hemolysin precursor [Yersinia pestis KIM 10] gi|45442837|ref|NP_994376.1| hemolysin [Yersinia pestis biovar Microtus str. 91001] gi|21956679|gb|AAM83617.1|AE013603_5 hemolysin precursor [Yersinia pestis KIM 10] gi|45437703|gb|AAS63253.1| hemolysin [Yersinia pestis biovar Microtus str. 91001] Length = 1654 Score = 34.6 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 2/66 (3%) Query: 33 LGIKPRLGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + ++ + + +S+K+ +++ + L E + T+S Sbjct: 1433 SHSNAKQDSLISQVANASPIMSDKIKNKLEEKSTKIFDKVENKFNTLGKEKDDSVQTIS- 1491 Query: 93 RYYKDG 98 Y KDG Sbjct: 1492 -YTKDG 1496 >gi|51597942|ref|YP_072133.1| hemolysin [Yersinia pseudotuberculosis IP 32953] gi|51591224|emb|CAH22890.1| hemolysin [Yersinia pseudotuberculosis IP 32953] Length = 1635 Score = 34.6 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 2/66 (3%) Query: 33 LGIKPRLGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + ++ + + +S+K+ +++ + L E + T+S Sbjct: 1414 SHSNAKQDSLISQVANASPIMSDKIKNKLEEKSTKIFDKVENKFNTLGKEKDDSVQTIS- 1472 Query: 93 RYYKDG 98 Y KDG Sbjct: 1473 -YTKDG 1477 >gi|162418196|ref|YP_001608221.1| hemagglutination activity domain-containing protein [Yersinia pestis Angola] gi|162351011|gb|ABX84959.1| haemagglutination activity domain protein [Yersinia pestis Angola] Length = 1635 Score = 34.6 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 2/66 (3%) Query: 33 LGIKPRLGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + ++ + + +S+K+ +++ + L E + T+S Sbjct: 1414 SHSNAKQDSLISQVANASPIMSDKIKNKLEEKSTKIFDKVENKFNTLGKEKDDSVQTIS- 1472 Query: 93 RYYKDG 98 Y KDG Sbjct: 1473 -YTKDG 1477 >gi|108806020|ref|YP_649936.1| hemolysin [Yersinia pestis Antiqua] gi|108810185|ref|YP_645952.1| hemolysin [Yersinia pestis Nepal516] gi|153997251|ref|ZP_02022351.1| hemolysin [Yersinia pestis CA88-4125] gi|165927921|ref|ZP_02223753.1| hemolysin [Yersinia pestis biovar Orientalis str. F1991016] gi|165939796|ref|ZP_02228337.1| hemolysin [Yersinia pestis biovar Orientalis str. IP275] gi|166012030|ref|ZP_02232928.1| hemolysin [Yersinia pestis biovar Antiqua str. E1979001] gi|166213465|ref|ZP_02239500.1| hemolysin [Yersinia pestis biovar Antiqua str. B42003004] gi|167401323|ref|ZP_02306823.1| hemolysin [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420514|ref|ZP_02312267.1| hemolysin [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426895|ref|ZP_02318648.1| hemolysin [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468359|ref|ZP_02333063.1| hemolysin [Yersinia pestis FV-1] gi|218930727|ref|YP_002348602.1| hemolysin [Yersinia pestis CO92] gi|229837463|ref|ZP_04457626.1| hemolysin [Yersinia pestis Pestoides A] gi|229839398|ref|ZP_04459557.1| hemolysin [Yersinia pestis biovar Orientalis str. PEXU2] gi|229899960|ref|ZP_04515101.1| hemolysin [Yersinia pestis biovar Orientalis str. India 195] gi|229904714|ref|ZP_04519825.1| hemolysin [Yersinia pestis Nepal516] gi|270488421|ref|ZP_06205495.1| filamentous hemagglutinin family N-terminal domain protein [Yersinia pestis KIM D27] gi|294505391|ref|YP_003569453.1| hemolysin [Yersinia pestis Z176003] gi|108773833|gb|ABG16352.1| hemolysin [Yersinia pestis Nepal516] gi|108777933|gb|ABG11991.1| hemolysin [Yersinia pestis Antiqua] gi|115349338|emb|CAL22308.1| hemolysin [Yersinia pestis CO92] gi|149288888|gb|EDM38968.1| hemolysin [Yersinia pestis CA88-4125] gi|165912291|gb|EDR30927.1| hemolysin [Yersinia pestis biovar Orientalis str. IP275] gi|165920077|gb|EDR37378.1| hemolysin [Yersinia pestis biovar Orientalis str. F1991016] gi|165989066|gb|EDR41367.1| hemolysin [Yersinia pestis biovar Antiqua str. E1979001] gi|166205406|gb|EDR49886.1| hemolysin [Yersinia pestis biovar Antiqua str. B42003004] gi|166961320|gb|EDR57341.1| hemolysin [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049348|gb|EDR60756.1| hemolysin [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054122|gb|EDR63949.1| hemolysin [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229678832|gb|EEO74937.1| hemolysin [Yersinia pestis Nepal516] gi|229687452|gb|EEO79527.1| hemolysin [Yersinia pestis biovar Orientalis str. India 195] gi|229695764|gb|EEO85811.1| hemolysin [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705586|gb|EEO91596.1| hemolysin [Yersinia pestis Pestoides A] gi|262367384|gb|ACY63941.1| putative hemolysin [Yersinia pestis D182038] gi|270336925|gb|EFA47702.1| filamentous hemagglutinin family N-terminal domain protein [Yersinia pestis KIM D27] gi|294355850|gb|ADE66191.1| hemolysin [Yersinia pestis Z176003] gi|320013230|gb|ADV96801.1| hemolysin [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 1635 Score = 34.6 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 2/66 (3%) Query: 33 LGIKPRLGDILEEHIDDKSTISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATTNTLSA 92 + ++ + + +S+K+ +++ + L E + T+S Sbjct: 1414 SHSNAKQDSLISQVANASPIMSDKIKNKLEEKSTKIFDKVENKFNTLGKEKDDSVQTIS- 1472 Query: 93 RYYKDG 98 Y KDG Sbjct: 1473 -YTKDG 1477 >gi|313886989|ref|ZP_07820689.1| DNA (cytosine-5-)-methyltransferase [Porphyromonas asaccharolytica PR426713P-I] gi|312923515|gb|EFR34324.1| DNA (cytosine-5-)-methyltransferase [Porphyromonas asaccharolytica PR426713P-I] Length = 349 Score = 34.6 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 16/33 (48%) Query: 5 DFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKP 37 D+G+PQ R RL ++ +++ PT Sbjct: 155 DYGIPQNRRRLVLLASKFGAIDLIPPTNNPSNY 187 >gi|168204994|ref|ZP_02630999.1| modification methylase DdeI [Clostridium perfringens E str. JGS1987] gi|168212393|ref|ZP_02638018.1| modification methylase DdeI [Clostridium perfringens CPE str. F4969] gi|170663374|gb|EDT16057.1| modification methylase DdeI [Clostridium perfringens E str. JGS1987] gi|170716088|gb|EDT28270.1| modification methylase DdeI [Clostridium perfringens CPE str. F4969] Length = 436 Score = 34.6 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 1/36 (2%) Query: 7 GVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDI 42 +PQ R+R+ + F +P K + DI Sbjct: 225 NIPQNRKRVILFGFKKEL-NLHYPNFYKYKLNINDI 259 >gi|18542936|gb|AAL75761.1| Putative DNA cytosine methyltransferase MET2a [Oryza sativa Japonica Group] Length = 719 Score = 34.6 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 16/30 (53%) Query: 6 FGVPQRRERLYIIDFLNPSVEFKFPTPLGI 35 +G+PQ R R+++ L V K+P P Sbjct: 571 YGLPQFRMRVFLWGALPTMVLPKYPLPTHN 600 >gi|229183237|ref|ZP_04310467.1| Site-specific DNA-methyltransferase [Bacillus cereus BGSC 6E1] gi|228600376|gb|EEK57966.1| Site-specific DNA-methyltransferase [Bacillus cereus BGSC 6E1] Length = 592 Score = 34.6 bits (78), Expect = 5.2, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 35/96 (36%), Gaps = 12/96 (12%) Query: 3 ACDFGVPQRRERLYIIDFLN---PSVEFKFPTP-LGIKPRLGDI---LEEHIDDKSTISN 55 + D+ VPQ+R+R I+ + E KFP I + D LE KST S+ Sbjct: 367 SNDYFVPQKRQRFMILGIKSSATQYKEIKFPERYTQIDFTVRDAIGDLEGITPAKSTESH 426 Query: 56 KLWEGHQKRKENNKI-----AGKGFGYGLFFENSAT 86 K+ + K + Y +S Sbjct: 427 KIDYNIELNKTVMQHYYRSGMNDNVIYNHINTDSEP 462 >gi|251781727|ref|YP_002996029.1| 5-methylcytosine methyltransferase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390356|dbj|BAH80815.1| 5-methylcytosine methyltransferase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 422 Score = 34.2 bits (77), Expect = 5.4, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 30/91 (32%), Gaps = 7/91 (7%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLWEG 60 + A ++G QRR R++ + N + +F + + ++ ++G Sbjct: 159 INAAEYGRSQRRRRVFFFVYQNDT-DFA-----KKIDKQFENDNSVFEENKYDDYIFYDG 212 Query: 61 HQKRKENNKIAGKGFGYGLFFENSATTNTLS 91 + K + + T+S Sbjct: 213 LFANQFPIKNMVVKNRRAYYNLDDDIV-TVS 242 >gi|12275200|emb|CAC22275.1| cytosine methyl transferase [Listeria monocytogenes] Length = 352 Score = 34.2 bits (77), Expect = 5.4, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHIDDKSTISNKLWEGH 61 A ++GVPQ+R+RL ++ + PT P + + + K+ ++ H Sbjct: 153 APEYGVPQKRKRLLLLASKIGEISLLEPTRTKDNYPTVREAISRLKPIKAGETDNEDFLH 212 Query: 62 QKRKENN 68 + RK ++ Sbjct: 213 RARKLSD 219 >gi|254932546|ref|ZP_05265905.1| cytosine methyl transferase [Listeria monocytogenes HPB2262] gi|293584103|gb|EFF96135.1| cytosine methyl transferase [Listeria monocytogenes HPB2262] gi|332310737|gb|EGJ23832.1| DNA (Cytosine-5-)-methyltransferase [Listeria monocytogenes str. Scott A] Length = 351 Score = 34.2 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHIDDKSTISNKLWEGH 61 A ++GVPQ+R+RL ++ + PT P + + + K+ ++ H Sbjct: 153 APEYGVPQKRKRLLLLASKIGEISLLEPTRTKDNYPTVREAISRLKPIKAGETDNEDFLH 212 Query: 62 QKRKENN 68 + RK ++ Sbjct: 213 RARKLSD 219 >gi|238855331|ref|ZP_04645644.1| methyl transferase [Lactobacillus jensenii 269-3] gi|282933726|ref|ZP_06339082.1| Phi-3T prophage-derived modification methylase Phi3TI [Lactobacillus jensenii 208-1] gi|313472896|ref|ZP_07813384.1| type II DNA modification methyltransferase [Lactobacillus jensenii 1153] gi|238832031|gb|EEQ24355.1| methyl transferase [Lactobacillus jensenii 269-3] gi|239528918|gb|EEQ67919.1| type II DNA modification methyltransferase [Lactobacillus jensenii 1153] gi|281302166|gb|EFA94412.1| Phi-3T prophage-derived modification methylase Phi3TI [Lactobacillus jensenii 208-1] Length = 343 Score = 34.2 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 2/31 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFP 30 + + + VPQ RER+Y+I L FP Sbjct: 151 INSKEV-VPQNRERVYLIGHLRGKCSNKVFP 180 >gi|207111635|ref|ZP_03245797.1| cytosine specific DNA methyltransferase [Helicobacter pylori HPKX_438_CA4C1] Length = 42 Score = 34.2 bits (77), Expect = 5.6, Method: Composition-based stats. Identities = 7/12 (58%), Positives = 9/12 (75%) Query: 1 MKACDFGVPQRR 12 + A D+GVPQ R Sbjct: 31 LNAKDYGVPQNR 42 >gi|116871711|ref|YP_848492.1| cytosine methyl transferase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740589|emb|CAK19709.1| cytosine methyl transferase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 351 Score = 34.2 bits (77), Expect = 5.6, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 3 ACDFGVPQRRERLYIIDFLNPSVEFKFPTPLG-IKPRLGDILEEHIDDKSTISNKLWEGH 61 A ++GVPQ+R+RL ++ + PT P + + + K+ ++ H Sbjct: 153 APEYGVPQKRKRLLLLASKIGEISLLEPTRTKDNYPTVREAISRLKPIKAGETDNEDFLH 212 Query: 62 QKRKENN 68 + RK ++ Sbjct: 213 RARKLSD 219 >gi|15236318|ref|NP_193097.1| MEE57 (maternal effect embryo arrest 57); DNA (cytosine-5-)-methyltransferase/ DNA binding / protein binding [Arabidopsis thaliana] gi|4678387|emb|CAB41119.1| DNA (cytosine-5-)-methyltransferase-like protein [Arabidopsis thaliana] gi|7268065|emb|CAB78403.1| DNA (cytosine-5-)-methyltransferase-like protein [Arabidopsis thaliana] gi|332657902|gb|AEE83302.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana] Length = 1404 Score = 34.2 bits (77), Expect = 5.6, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIKPRLG 40 ++A +G+ Q R+R +I V ++P P+ + G Sbjct: 1158 LEAGAYGISQPRKRAFIWAAAPNEVLPEWPEPMHVFNNPG 1197 >gi|182417652|ref|ZP_02948971.1| modification methylase Sau3AI [Clostridium butyricum 5521] gi|237668746|ref|ZP_04528730.1| modification methylase Sau3AI (Cytosine-specificmethyltransferase Sau3AI) (M.Sau3AI) [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378376|gb|EDT75907.1| modification methylase Sau3AI [Clostridium butyricum 5521] gi|237657094|gb|EEP54650.1| modification methylase Sau3AI (Cytosine-specificmethyltransferase Sau3AI) (M.Sau3AI) [Clostridium butyricum E4 str. BoNT E BL5262] Length = 426 Score = 34.2 bits (77), Expect = 5.7, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 22/68 (32%), Gaps = 10/68 (14%) Query: 33 LGIKPRLGDILEEHIDDKSTI---SNKLWEGHQKRKENNKIAGKGFGY-------GLFFE 82 + L DILE+ +D+K + + W + K + + G Y Sbjct: 266 TEKQITLNDILEKTVDEKYYLVGEDLEKWTYMKGPKAIERTSKTGHKYMFREGGIAFPDP 325 Query: 83 NSATTNTL 90 T+ Sbjct: 326 TDKPARTI 333 >gi|253571497|ref|ZP_04848903.1| DNA-cytosine methyltransferase [Bacteroides sp. 1_1_6] gi|251838705|gb|EES66790.1| DNA-cytosine methyltransferase [Bacteroides sp. 1_1_6] Length = 436 Score = 34.2 bits (77), Expect = 5.8, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 28/101 (27%), Gaps = 16/101 (15%) Query: 3 ACDFGVPQRRERLYIIDFLN-----PSVEFKFP---TPLGIKPRLGDILEEHIDDK---- 50 A GV Q+R R+ I+ + N + +P + D+ + K Sbjct: 198 ASQHGVLQKRHRVIIVGWQNKRDTQEDTSYHYPYLLEEQMPYKMMRDLFCDLPIVKAGEG 257 Query: 51 ----STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATT 87 K + K++ F + T Sbjct: 258 TLCGIVHYTKPLSDMEYLKKSGIRGVLSFTTQHIARPNNPT 298 >gi|282851890|ref|ZP_06261250.1| modification methylase Rho11sI family protein [Lactobacillus gasseri 224-1] gi|282556899|gb|EFB62501.1| modification methylase Rho11sI family protein [Lactobacillus gasseri 224-1] Length = 343 Score = 34.2 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 2/31 (6%) Query: 1 MKACDFGVPQRRERLYIIDFLNPS-VEFKFP 30 + + + VPQ RER+Y+I L FP Sbjct: 151 INSKEV-VPQNRERVYLIGHLRGKCSNKVFP 180 >gi|294155594|ref|YP_003559978.1| cytosine-specific DNA modification methyltransferase [Mycoplasma crocodyli MP145] gi|291600134|gb|ADE19630.1| cytosine-specific DNA modification methyltransferase [Mycoplasma crocodyli MP145] Length = 388 Score = 33.8 bits (76), Expect = 7.0, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 1 MKACDFGVPQRRERLYIID-FLNPSVEFKFPTPLGIKPRLGDILEEHIDDKSTISNKLW 58 + + +PQ RER++II + +++ + D I DK+ + +K + Sbjct: 148 LSPHNLKIPQLRERVFIIGKYDLDNIDKDLIINNSTYSKKNDNSIYDIIDKNKVEDKYY 206 >gi|229056682|ref|ZP_04196086.1| Site-specific DNA-methyltransferase [Bacillus cereus AH603] gi|228720618|gb|EEL72179.1| Site-specific DNA-methyltransferase [Bacillus cereus AH603] Length = 602 Score = 33.8 bits (76), Expect = 7.2, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 3/32 (9%) Query: 3 ACDFGVPQRRERLYIIDFLN---PSVEFKFPT 31 + D+ VPQ+R+R I+ + E KFP Sbjct: 377 SNDYFVPQKRQRFMILGIKSSATQYKEIKFPE 408 >gi|26554428|ref|NP_758362.1| cytosine-specific DNA methylase [Mycoplasma penetrans HF-2] gi|26454438|dbj|BAC44766.1| cytosine-specific DNA methylase [Mycoplasma penetrans HF-2] Length = 426 Score = 33.8 bits (76), Expect = 8.8, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 15/26 (57%) Query: 1 MKACDFGVPQRRERLYIIDFLNPSVE 26 + +FG+PQ R R++I L SV Sbjct: 157 LSPHEFGIPQERYRVFIPGVLRESVN 182 >gi|289616708|emb|CBI56658.1| unnamed protein product [Sordaria macrospora] Length = 872 Score = 33.8 bits (76), Expect = 8.9, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 12/35 (34%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK 36 +G+PQ R RL +I FP Sbjct: 454 NFSQYGLPQPRRRLIMIGAGPGERLPPFPPSTHSP 488 >gi|164510146|emb|CAJ40944.1| putative DNA cytosine methyltransferase [Sordaria macrospora] Length = 872 Score = 33.8 bits (76), Expect = 8.9, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 12/35 (34%) Query: 2 KACDFGVPQRRERLYIIDFLNPSVEFKFPTPLGIK 36 +G+PQ R RL +I FP Sbjct: 454 NFSQYGLPQPRRRLIMIGAGPGERLPPFPPSTHSP 488 >gi|317505386|ref|ZP_07963311.1| DNA (cytosine-5-)-methyltransferase [Prevotella salivae DSM 15606] gi|315663493|gb|EFV03235.1| DNA (cytosine-5-)-methyltransferase [Prevotella salivae DSM 15606] Length = 436 Score = 33.4 bits (75), Expect = 9.1, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 28/101 (27%), Gaps = 16/101 (15%) Query: 3 ACDFGVPQRRERLYIIDFLN-----PSVEFKFP---TPLGIKPRLGDILEEHIDDK---- 50 A GV Q+R R+ I+ + N + +P + D+ + K Sbjct: 198 ASQHGVLQKRHRVIIVGWQNKRDTQEDTSYHYPYLLEEQIPYKIMRDLFCDLPIIKAGEG 257 Query: 51 ----STISNKLWEGHQKRKENNKIAGKGFGYGLFFENSATT 87 K + K++ F + T Sbjct: 258 TLCGIVHYTKPLNDMEYLKKSGIRGVLSFTTQHIARPNNPT 298 >gi|302531233|ref|ZP_07283575.1| DNA-cytosine methyltransferase [Streptomyces sp. AA4] gi|302440128|gb|EFL11944.1| DNA-cytosine methyltransferase [Streptomyces sp. AA4] Length = 371 Score = 33.4 bits (75), Expect = 9.4, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 1/22 (4%) Query: 1 MKACDFGVPQRRERLYIIDFLN 22 + A F VPQ R RL+I+ N Sbjct: 156 LDARRF-VPQSRPRLFIVGAQN 176 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.310 0.140 0.469 Lambda K H 0.267 0.0429 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 964,653,591 Number of Sequences: 14124377 Number of extensions: 23964546 Number of successful extensions: 81509 Number of sequences better than 10.0: 2682 Number of HSP's better than 10.0 without gapping: 2365 Number of HSP's successfully gapped in prelim test: 317 Number of HSP's that attempted gapping in prelim test: 78154 Number of HSP's gapped (non-prelim): 2786 length of query: 101 length of database: 4,842,793,630 effective HSP length: 70 effective length of query: 31 effective length of database: 3,854,087,240 effective search space: 119476704440 effective search space used: 119476704440 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 76 (33.8 bits)