HHsearch alignment for GI: 255764505 and conserved domain: PRK11557
>PRK11557 putative DNA-binding transcriptional regulator; Provisional.
Probab=99.93 E-value=2.2e-24 Score=197.81 Aligned_cols=187 Identities=21% Similarity=0.243 Sum_probs=147.9
Q ss_pred HHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 67888655765533--------------2457999999999999999999999720011366999999998279959999
Q gi|255764505|r 5 FSHFKSVTRKGHSL--------------MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70 (341)
Q Consensus 5 ~~~~~~~~~~~~~~--------------~~~~~~~~a~~~l~~e~~al~~l~~~l~~~~~~~~~~av~~i~~~~grv~~~ 70 (341)
T Consensus 63 f~efK~~l~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~l~~t---~~~~~~~~l~~av~~i~~A~-~I~i~ 138 (282)
T PRK11557 63 FPALKLALSEALASQPEPPSVPVHNQIRGDDPLRLVGEKLIKENTAAMYAT---LDVNSEEKLHECVTMLRSAR-RIILT 138 (282)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HHCCCHHHHHHHHHHHHCCC-CEEEE
T ss_conf 999999999998614564334212446767759999999999999999999---83368999999999996489-58999
Q ss_pred ECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCC
Q ss_conf 33813799999999987508861101233023202301210470789836878078876666632045627998447889
Q gi|255764505|r 71 GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150 (341)
Q Consensus 71 GvG~S~~ia~k~a~tl~s~G~~a~~~~~~ea~Hgdlg~i~~~Dv~i~iS~SG~t~e~~~~~~~~k~~~~~iI~iT~~~~S 150 (341)
T Consensus 139 G~G~S~~vA~~~~~kl~rig~~~~~~~d~~~~~~~~~~l~~~Dv~I~iS~sG~t~~~~~~~~~Ak~~Ga~iIaIT~~~~s 218 (282)
T PRK11557 139 GIGASGLVAQNFAWKLMKIGINAVAERDMHALLATVQALSPDDLLLAISYSGERRELNLAADEALRVGGKVLAITGFTPN 218 (282)
T ss_pred ECCCHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf 70436999999999999809963740886899999981899998999859999789999999999879939997298998
Q ss_pred HHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 54521453376886155432475217899999999999999999850
Q gi|255764505|r 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197 (341)
Q Consensus 151 ~la~~ad~~l~~~~~~Ea~~~~~aPt~Stt~~l~~~Dalav~l~~~~ 197 (341)
T Consensus 219 pLa~~aD~~L~~~~~e--~~~~~~~~~s~~a~l~iiD~L~~~~~~~~ 263 (282)
T PRK11557 219 ALQQRASHCLYTIAEE--QATRSAAISSTHAQGMLTDLLFMALIQQD 263 (282)
T ss_pred CHHHHCCEEEEECCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 1588699999847853--10134343999999999999999999978