HHsearch alignment for GI: 255764505 and conserved domain: TIGR00393

>TIGR00393 kpsF sugar isomerase, KpsF/GutQ family; InterPro: IPR004800 This is a family of closely related proteins with the phosphosugar-binding domain SIS (Sugar ISomerase) followed by two copies of the CBS (named after Cystathionine Beta Synthase) domain. The group includes GutQ, a protein of the glucitol operon and KpsF, a virulence factor involved in capsular polysialic acid biosynthesis in some pathogenic strains of Escherichia coli.; GO: 0016853 isomerase activity, 0005975 carbohydrate metabolic process.
Probab=100.00  E-value=0  Score=678.99  Aligned_cols=267  Identities=46%  Similarity=0.759  Sum_probs=260.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf             95999933813799999999987508861101233023202301210470789836878078876666632045627998
Q gi|255764505|r   65 GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI  144 (341)
Q Consensus        65 grv~~~GvG~S~~ia~k~a~tl~s~G~~a~~~~~~ea~Hgdlg~i~~~Dv~i~iS~SG~t~e~~~~~~~~k~~~~~iI~i  144 (341)
T Consensus         1 GklVv~GiGKSGliGkK~vAt~aSTGtPSfFlHPtEA~HGDLGMv~~~Dvvl~ISYSGEs~e~~~Lip~Lk~~~~~lia~   80 (272)
T TIGR00393         1 GKLVVVGIGKSGLIGKKIVATFASTGTPSFFLHPTEALHGDLGMVEPRDVVLLISYSGESKELDKLIPSLKRLSVKLIAV   80 (272)
T ss_pred             CEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf             90899840706678999999741247755324643450364357586747999876887577877535777559708997


Q ss_pred             ECCCCCHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-HHHHHH
Q ss_conf             4478895452145337688615543247521789999999999999999985033878887531100111124-333332
Q gi|255764505|r  145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLF-VCASDV  223 (341)
Q Consensus       145 T~~~~S~la~~ad~~l~~~~~~Ea~~~~~aPt~Stt~~l~~~Dalav~l~~~~~~t~~df~~~HPgG~lg~~L-l~V~Di  223 (341)
T Consensus        81 T~~p~S~La~~Ad~~L~i~v~kEaCP~~lAPTsSt~~TL~lGDaLa~al~~ArnF~~eDFA~~HPGG~LG~kLL~kV~dl  160 (272)
T TIGR00393        81 TGKPNSSLARAADYVLDIKVEKEACPLNLAPTSSTTVTLALGDALAVALMKARNFSEEDFAKFHPGGALGRKLLVKVKDL  160 (272)
T ss_pred             CCCCCCCHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf             28889724530654576677530278989735689999998899999998525888424411487046667888876776


Q ss_pred             HCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHH--HHC-CCCCCCHHHHCCCCCEEEC-CC
Q ss_conf             1047543055100238888987410466200000043232324123403567--617-8233709883488978977-99
Q gi|255764505|r  224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHK-DLNTLSVEDVMIKNPKVIL-ED  299 (341)
Q Consensus       224 M~~~~~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR~--l~~-~~~~~~v~~iMt~~p~~I~-~d  299 (341)
T Consensus       161 m~t~d~lP~v~~tas~~DAL~e~~~~~LG~~~v~~~~~~~~Gv~tDGD~RR~l~~~g~~~l~~~v~~~mT~~p~~~~n~~  240 (272)
T TIGR00393       161 MQTDDELPLVAPTASFKDALLEMSRKRLGLAVVCDENEQLKGVFTDGDLRRVLALLGGGALKKEVKDFMTLGPKTLKNSD  240 (272)
T ss_pred             HCCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEECCCCEEEEEECCHHHHHHHHHCCHHCCCCHHHHCCCCCEEEECHH
T ss_conf             40665678222367720210233137861799971555246787146599999881660002312221068881340145


Q ss_pred             CCHHHHHHHHHHCCCCEEEEEECCCEEEEEEE
Q ss_conf             87899999999679958999806984899985
Q gi|255764505|r  300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH  331 (341)
Q Consensus       300 ~~i~eAl~lM~~~kI~~LpVVD~~~~lvGiIt  331 (341)
T Consensus       241 ~~l~~A~~~l~~~kI~~~~vvdd~nkl~G~~~  272 (272)
T TIGR00393       241 ELLVEALEFLKKRKITSLVVVDDENKLLGVLH  272 (272)
T ss_pred             HHHHHHHHHHHHCCCEEEEEECCCCEEEEEEC
T ss_conf             68999999987279428999838971787539