HHsearch alignment for GI: 255764505 and conserved domain: TIGR01135
>TIGR01135 glmS glucosamine--fructose-6-phosphate aminotransferase, isomerizing; InterPro: IPR005855 Glucosamine:fructose-6-phosphate aminotransferase (2.6.1.16 from EC) catalyses the formation of glucosamine 6-phosphate and is the first and rate-limiting enzyme of the hexosamine biosynthetic pathway. The final product of the hexosamine pathway, UDP-N-acetyl glucosamine, is an active precursor of numerous macromolecules containing amino sugars. This family of sequences belong to the MEROPS peptidase family C44 (clan PB(C)), and are classified as non-peptidase homologs.; GO: 0004360 glutamine-fructose-6-phosphate transaminase (isomerizing) activity, 0016051 carbohydrate biosynthetic process, 0005737 cytoplasm.
Probab=96.63 E-value=0.082 Score=33.52 Aligned_cols=142 Identities=21% Similarity=0.232 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCC-----CCCHHHHCCCEEECCCEEEEE--ECCC
Q ss_conf 366999999998279959999338137999999999875088611012-----330232023012104707898--3687
Q gi|255764505|r 50 SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH-----AAEASHGDLGMITRDDLIIVL--SWSG 122 (341)
Q Consensus 50 ~~~~~~av~~i~~~~grv~~~GvG~S~~ia~k~a~tl~s~G~~a~~~~-----~~ea~Hgdlg~i~~~Dv~i~i--S~SG 122 (341)
T Consensus 468 ~~~i~~~A~~~~~~~-~flFlGRg~~YPiALEGALKLKEI----SYIHAEgYpAGElKHGPiALid~~~PVva~ap~~~G 542 (628)
T TIGR01135 468 DEKIAELAEKYADKR-NFLFLGRGLGYPIALEGALKLKEI----SYIHAEGYPAGELKHGPIALIDEGLPVVAIAPKDSG 542 (628)
T ss_pred CHHHHHHHHHHHHCC-CEEEECCCCCCHHHHHHHHHHHHH----HHHHHCCCCCCCCCCCCCEEECCCCEEEEEECCCCC
T ss_conf 668999999973168-738983557770232354466565----456524544553456850033188708998278898
Q ss_pred CCHHHHHHHHHHHCCCCCEEEEECC-CCCHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf 8078876666632045627998447-889545214533768861554324752178999999999999999998503387
Q gi|255764505|r 123 SSDELKAILYYARRFSIPLIAITSE-NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201 (341)
Q Consensus 123 ~t~e~~~~~~~~k~~~~~iI~iT~~-~~S~la~~ad~~l~~~~~~Ea~~~~~aPt~Stt~~l~~~Dalav~l~~~~~~t~ 201 (341)
T Consensus 543 l~~K~~SNv~Ev~ARga~vi~~~~~~~~~~~~~~~d~~i~~P~~~~----~~~P~~~l---~iplQLlAYhiA~~kG~Dv 615 (628)
T TIGR01135 543 LLEKTKSNVEEVKARGARVIVLASEDDAELIAAIADDIIKLPEVEE----LLAPIVYL---TIPLQLLAYHIALAKGTDV 615 (628)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEECCCCC----CCCCHHHH---HHHHHHHHHHHHHHHCCCC
T ss_conf 5077788899887269638998257753243110545888468886----30416676---7999999999999708643
Q ss_pred HH
Q ss_conf 88
Q gi|255764505|r 202 ND 203 (341)
Q Consensus 202 ~d 203 (341)
T Consensus 616 Dk 617 (628)
T TIGR01135 616 DK 617 (628)
T ss_pred CC
T ss_conf 68