HHsearch alignment for GI: 255764505 and conserved domain: TIGR01137
>TIGR01137 cysta_beta cystathionine beta-synthase; InterPro: IPR005857 This model discriminates cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain from cysteine synthases. Cysteine synthase (O-acetylserine (thiol)-lyase) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid - the function of many of these enzymes is unproven.; GO: 0004122 cystathionine beta-synthase activity, 0019343 cysteine biosynthetic process via cystathionine, 0005737 cytoplasm.
Probab=98.24 E-value=6.1e-06 Score=63.61 Aligned_cols=116 Identities=27% Similarity=0.297 Sum_probs=93.2
Q ss_pred HHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEECC--------CCCEEEEEEECCCHHHHHHC-C-CCCCCHH-
Q ss_conf 33333210475430551002388889874104662000000--------43232324123403567617-8-2337098-
Q gi|255764505|r 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD--------EGQKLKGIITEGDIFRNFHK-D-LNTLSVE- 286 (341)
Q Consensus 218 l~V~DiM~~~~~ip~V~~~~si~eal~~m~~~~~g~v~Vvd--------~~~~liGIITdgDlrR~l~~-~-~~~~~v~- 286 (341)
T Consensus 366 ~~v~~l~L~--~~v~~~~t~tv~~ai~iLre~GfdQ~PVv~pga~~P~veag~v~G~v~l~~lL~~l~~~~a~~~D~v~G 443 (527)
T TIGR01137 366 ARVKDLHLP--ALVTVHPTETVGDAIEILREYGFDQLPVVKPGAAEPDVEAGKVLGSVTLRELLSALFAKKAKLEDAVSG 443 (527)
T ss_pred CEEECCCCC--CCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCCC
T ss_conf 364156688--734546764089999999974873076207788889723534788742677899998424675544343
Q ss_pred -----HHCC---------------CCCEEECCCCCHHHHHHHHHHCCCCEEEEEECCCE------------EEEEEEHHH
Q ss_conf -----8348---------------89789779987899999999679958999806984------------899985888
Q gi|255764505|r 287 -----DVMI---------------KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK------------AIGIVHFLD 334 (341)
Q Consensus 287 -----~iMt---------------~~p~~I~~d~~i~eAl~lM~~~kI~~LpVVD~~~~------------lvGiIt~~D 334 (341)
T Consensus 444 kyldfk~~~~Fndvssynenk~~~~~~~~i~~~~~l~~L~~~le~~~--~a~V~~e~~pyhstGkssqrq~~~gvVT~~D 521 (527)
T TIGR01137 444 KYLDFKVMSRFNDVSSYNENKSKKKKFIQIGEGEKLADLSKFLEKNS--SAIVVEEGKPYHSTGKSSQRQMVIGVVTKID 521 (527)
T ss_pred CCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCC--CEEEEECCCCCCCCCCCCCCEEEEEEEEHHH
T ss_conf 00034445321010001010246767654467751899999851696--1899707823212565424327898644122
Q ss_pred HHH
Q ss_conf 974
Q gi|255764505|r 335 LLR 337 (341)
Q Consensus 335 Llk 337 (341)
T Consensus 522 LL~ 524 (527)
T TIGR01137 522 LLS 524 (527)
T ss_pred HHH
T ss_conf 443