HHsearch alignment for GI: 255764505 and conserved domain: TIGR01137
>TIGR01137 cysta_beta cystathionine beta-synthase; InterPro: IPR005857 This model discriminates cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain from cysteine synthases. Cysteine synthase (O-acetylserine (thiol)-lyase) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid - the function of many of these enzymes is unproven.; GO: 0004122 cystathionine beta-synthase activity, 0019343 cysteine biosynthetic process via cystathionine, 0005737 cytoplasm.
Probab=96.94 E-value=0.0013 Score=46.53 Aligned_cols=124 Identities=23% Similarity=0.357 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH---HH--HHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCC
Q ss_conf 9999999998503387888753110011112---43--333321047543055100238888987410466200000043
Q gi|255764505|r 186 GDALAIALLESRNFSENDFYVLHPGGKLGTL---FV--CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260 (341)
Q Consensus 186 ~Dalav~l~~~~~~t~~df~~~HPgG~lg~~---Ll--~V~DiM~~~~~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~ 260 (341)
T Consensus 284 GsAvvaal~---------~A~~hP~l~~~~~~VvlLPDS~R~YmtK-----~~n------D--~Wl~~~Gf----l~~-- 335 (527)
T TIGR01137 284 GSAVVAALK---------VAEDHPELKEDQVIVVLLPDSIRNYMTK-----FLN------D--EWLLDNGF----LDD-- 335 (527)
T ss_pred HHHHHHHHH---------HHHHCCCCCCCCEEEEEECCCCCHHHHH-----EEC------H--HHHHHCCC----CCC--
T ss_conf 358999999---------9872678888878999846873000100-----104------3--78864587----510--
Q ss_pred CEEEE---EEECCCHHHH------HHCCCCCCCHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCEEEEEE--------CC
Q ss_conf 23232---4123403567------6178233709883488978977998789999999967995899980--------69
Q gi|255764505|r 261 QKLKG---IITEGDIFRN------FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--------DC 323 (341)
Q Consensus 261 ~~liG---IITdgDlrR~------l~~~~~~~~v~~iMt~~p~~I~~d~~i~eAl~lM~~~kI~~LpVVD--------~~ 323 (341)
T Consensus 336 -rldg~~e~~~~~~~~~leasttky~~~~~~~~v~~l~L~~~v~~~~t~tv~~ai~iLre~GfdQ~PVv~pga~~P~vea 414 (527)
T TIGR01137 336 -RLDGSTESLTVKDVLKLEASTTKYEDVFGNARVKDLHLPALVTVHPTETVGDAIEILREYGFDQLPVVKPGAAEPDVEA 414 (527)
T ss_pred -CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf -1157761345444555433322255642563641566887345467640899999999748730762077888897235
Q ss_pred CEEEEEEEHHHHHHC
Q ss_conf 848999858889743
Q gi|255764505|r 324 QKAIGIVHFLDLLRF 338 (341)
Q Consensus 324 ~~lvGiIt~~DLlka 338 (341)
T Consensus 415 g~v~G~v~l~~lL~~ 429 (527)
T TIGR01137 415 GKVLGSVTLRELLSA 429 (527)
T ss_pred CEEEEEEEHHHHHHH
T ss_conf 347887426778999