HHsearch alignment for GI: 255764505 and conserved domain: TIGR03127
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=100.00 E-value=9e-35 Score=273.48 Aligned_cols=168 Identities=24% Similarity=0.381 Sum_probs=152.0
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCEEECCC
Q ss_conf 99999999997200113669999999982799599993381379999999998750886110123302320230121047
Q gi|255764505|r 34 EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113 (341)
Q Consensus 34 e~~al~~l~~~l~~~~~~~~~~av~~i~~~~grv~~~GvG~S~~ia~k~a~tl~s~G~~a~~~~~~ea~Hgdlg~i~~~D 113 (341)
T Consensus 4 il~ei~~t~~~id~---~~i~~~v~~I~~a~-~I~v~G~G~Sg~ia~~~a~rL~~~G~~~~~~~d~~~-----~~i~~~D 74 (179)
T TIGR03127 4 ILDEISQVASRIDE---EELDKLADKIIKAK-RIFVAGAGRSGLVGKAFAMRLMHLGFNVYVVGETTT-----PSIKKGD 74 (179)
T ss_pred HHHHHHHHHHHCCH---HHHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCC-----CCCCCCC
T ss_conf 99999999996699---99999999997399-099999554399999999999851975799764444-----6699999
Q ss_pred EEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCEEEEEE----ECCCCCCCCCHHHHHHH--HHHHHH
Q ss_conf 078983687807887666663204562799844788954521453376886----15543247521789999--999999
Q gi|255764505|r 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK----EPESCPHGLAPTTSAIM--QLAIGD 187 (341)
Q Consensus 114 v~i~iS~SG~t~e~~~~~~~~k~~~~~iI~iT~~~~S~la~~ad~~l~~~~----~~Ea~~~~~aPt~Stt~--~l~~~D 187 (341)
T Consensus 75 v~I~iS~SGeT~e~~~~~~~aK~~ga~ii~IT~~~~S~Lak~aD~~l~ip~~~~~~~~~~~~~~~p~~s~~e~~~l~~~D 154 (179)
T TIGR03127 75 LLIAISGSGETESLVTVAKKAKEIGATVAAITTNPESTLGKLADVVVEIPAATKKDSEGNYKSIQPLGSLFEQSLLLFLD 154 (179)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99998199996899999999998799299997989897799499999906865457778856668667499999999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 99999998503387888753110
Q gi|255764505|r 188 ALAIALLESRNFSENDFYVLHPG 210 (341)
Q Consensus 188 alav~l~~~~~~t~~df~~~HPg 210 (341)
T Consensus 155 al~~~l~~~~~~~~~~~~~~H~n 177 (179)
T TIGR03127 155 AVILKLMKKKGLDEEEMKKRHAN 177 (179)
T ss_pred HHHHHHHHHCCCCHHHHHHHCCC
T ss_conf 99999999819899999986556