HHsearch alignment for GI: 255764505 and conserved domain: cd02205
>cd02205 CBS_pair The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generali
Probab=99.54 E-value=5.2e-14 Score=122.34 Aligned_cols=110 Identities=32% Similarity=0.448 Sum_probs=100.4
Q ss_pred CCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHHCCC--CCCCHHHHCCCCCEEECCCCCHHHHH
Q ss_conf 4305510023888898741046620000004323232412340356761782--33709883488978977998789999
Q gi|255764505|r 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAM 306 (341)
Q Consensus 229 ~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR~l~~~~--~~~~v~~iMt~~p~~I~~d~~i~eAl 306 (341)
T Consensus 2 ~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 81 (113)
T cd02205 2 DVVTVSPDDTVAEALRLMLEHGISGLPVVDDDGRLVGIVTERDLLRALAEGGLDPLVTVGDVMTRDVVTVSPDTSLEEAA 81 (113)
T ss_pred CCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCHHHHHH
T ss_conf 97796892989999999998398099999399959999988998988763157410330456750546897321177999
Q ss_pred HHHHHCCCCEEEEEECCCEEEEEEEHHHHHHC
Q ss_conf 99996799589998069848999858889743
Q gi|255764505|r 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338 (341)
Q Consensus 307 ~lM~~~kI~~LpVVD~~~~lvGiIt~~DLlka 338 (341)
T Consensus 82 ~~~~~~~~~~~~Vvd~~~~~iG~vs~~di~~~ 113 (113)
T cd02205 82 ELMLEHGIRRLPVVDDEGRLVGIVTRSDILRA 113 (113)
T ss_pred HHHHHCCCEEEEEEECCCEEEEEEEHHHHHCC
T ss_conf 99998497299999669979999988997469