HHsearch alignment for GI: 255764505 and conserved domain: cd02205
>cd02205 CBS_pair The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generali
Probab=97.82 E-value=7.6e-05 Score=55.63 Aligned_cols=53 Identities=32% Similarity=0.477 Sum_probs=47.9
Q ss_pred HHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHH
Q ss_conf 3332104754305510023888898741046620000004323232412340356
Q gi|255764505|r 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274 (341)
Q Consensus 220 V~DiM~~~~~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR 274 (341)
T Consensus 60 ~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~Vvd~~~~~iG~vs~~di~~ 112 (113)
T cd02205 60 VGDVMTR--DVVTVSPDTSLEEAAELMLEHGIRRLPVVDDEGRLVGIVTRSDILR 112 (113)
T ss_pred EEEEEEC--CCEEEEECCHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEHHHHHC
T ss_conf 0456750--5468973211779999999849729999966997999998899746