HHsearch alignment for GI: 255764505 and conserved domain: cd04591

>cd04591 CBS_pair_EriC_assoc_euk_bac This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the EriC CIC-type chloride channels in eukaryotes and bacteria. These ion channels are proteins with a seemingly simple task of allowing the passive flow of chloride ions across biological membranes. CIC-type chloride channels come from all kingdoms of life, have several gene families, and can be gated by voltage. The members of the CIC-type chloride channel are double-barreled: two proteins forming homodimers at a broad interface formed by four helices from each protein. The two pores are not found at this interface, but are completely contained within each subunit, as deduced from the mutational analyses, unlike many other channels, in which four or five identical or structurally related subunits jointly form one pore. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS
Probab=99.47  E-value=6.5e-13  Score=114.33  Aligned_cols=100  Identities=26%  Similarity=0.360  Sum_probs=91.1

Q ss_pred             CCEEEEEHHHHHHHHHHHHCCCCCEEEECCC---CCEEEEEEECCCHHHHHHCCCCCCCHHHHCCCCCEEECCCCCHHHH
Q ss_conf             4305510023888898741046620000004---3232324123403567617823370988348897897799878999
Q gi|255764505|r  229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA  305 (341)
Q Consensus       229 ~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~---~~~liGIITdgDlrR~l~~~~~~~~v~~iMt~~p~~I~~d~~i~eA  305 (341)
T Consensus         3 ~vv~~~~~~tv~~~~~ll~~~~~~g~PVv~~~~~~~~lvG~i~~~dl~~~l---------~~~m~~~p~tv~~~~~l~~~   73 (105)
T cd04591           3 LVVLLPEGMTVEDLESLLSTTSHNGFPVVDSTEESPRLVGYILRSQLVVAL---------KNYIDPSPFTVSPRTSLEKV   73 (105)
T ss_pred             CEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEEHHHHHHHH---------HHHCCCCCEEECCCCCHHHH
T ss_conf             689938998999999999977997585883688788899999999999999---------97587998398999959999


Q ss_pred             HHHHHHCCCCEEEEEECCCEEEEEEEHHHHHHC
Q ss_conf             999996799589998069848999858889743
Q gi|255764505|r  306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF  338 (341)
Q Consensus       306 l~lM~~~kI~~LpVVD~~~~lvGiIt~~DLlka  338 (341)
T Consensus        74 ~~lf~~~g~r~l~Vv~-~g~lvGiITr~Dl~~a  105 (105)
T cd04591          74 HQLFRKLGLRHLLVVD-EGRLVGIITRKDLLKA  105 (105)
T ss_pred             HHHHHHHCCCEEEEEE-CCEEEEEEEHHHHHCC
T ss_conf             9999994995889957-9999999998995349