HHsearch alignment for GI: 255764505 and conserved domain: cd04592

>cd04592 CBS_pair_EriC_assoc_euk This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the EriC CIC-type chloride channels in eukaryotes. These ion channels are proteins with a seemingly simple task of allowing the passive flow of chloride ions across biological membranes. CIC-type chloride channels come from all kingdoms of life, have several gene families, and can be gated by voltage. The members of the CIC-type chloride channel are double-barreled: two proteins forming homodimers at a broad interface formed by four helices from each protein. The two pores are not found at this interface, but are completely contained within each subunit, as deduced from the mutational analyses, unlike many other channels, in which four or five identical or structurally related subunits jointly form one pore. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually
Probab=99.46  E-value=1.5e-13  Score=119.06  Aligned_cols=95  Identities=31%  Similarity=0.342  Sum_probs=79.6

Q ss_pred             CCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHHCC-------------CCCCCHHHHCC-----
Q ss_conf             430551002388889874104662000000432323241234035676178-------------23370988348-----
Q gi|255764505|r  229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-------------LNTLSVEDVMI-----  290 (341)
Q Consensus       229 ~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR~l~~~-------------~~~~~v~~iMt-----  290 (341)
T Consensus         2 ~~vtV~p~ttv~EA~~lM~~~~~~~~~VVD~~~~L~GIvt~gDi~R~~~~~~~~~~~~~~~~~~~~~~~vs~v~t~~~~~   81 (133)
T cd04592           2 KYIKVSPTTTLKEALNLMLDEKQSCVLVVDSDDFLEGILTLGDIQRFLFTNKTTRVQPEDETKQTNTCLVSSVCTKGISY   81 (133)
T ss_pred             CEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEE
T ss_conf             45998999859999999998188657998389978999787999999876235645632000124443233456420362


Q ss_pred             ----CCCEEECCCCCHHHHHHHHHHCCCCEEEEEECC
Q ss_conf             ----897897799878999999996799589998069
Q gi|255764505|r  291 ----KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC  323 (341)
Q Consensus       291 ----~~p~~I~~d~~i~eAl~lM~~~kI~~LpVVD~~  323 (341)
T Consensus        82 ~~~~~~~~tv~pd~~l~~a~~lM~~~~i~~LPVV~~~  118 (133)
T cd04592          82 GGQECGLWTCTPDTDLTTAKKLMEAKGVKQLPVVKRG  118 (133)
T ss_pred             CCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCEEECC
T ss_conf             5511003897899999999999998698858767077