>cd04598 CBS_pair_GGDEF_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the GGDEF (DiGuanylate-Cyclase (DGC)) domain. The GGDEF domain has been suggested to be homologous to the adenylyl cyclase catalytic domain and is thought to be involved in regulating cell surface adhesiveness in bacteria. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.

Probab=97.89  E-value=3.8e-05  Score=57.80  Aligned_cols=55  Identities=24%  Similarity=0.290  Sum_probs=46.3

Q ss_pred             HHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEE---ECCCCCEEEEEEECCCHHH
Q ss_conf             33333210475430551002388889874104662000---0004323232412340356
Q gi|255764505|r  218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA---VVDEGQKLKGIITEGDIFR  274 (341)
Q Consensus       218 l~V~DiM~~~~~ip~V~~~~si~eal~~m~~~~~g~v~---Vvd~~~~liGIITdgDlrR  274 (341)
T Consensus        61 ~pV~~~M~~--~p~~v~~~~~i~~~~~~~~~~~~~~l~~~ivV~~~g~~~Givt~~DLlr  118 (119)
T cd04598          61 KPVSEVMDP--DPLIVEADTPLEEVSRLATGRDSQNLYDGFIVTEEGRYLGIGTVKDLLR  118 (119)
T ss_pred             CCHHHHCCC--CCEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEEHHHHHC
T ss_conf             958997168--9879989896999999998569332578858957998999989899407