HHsearch alignment for GI: 255764505 and conserved domain: cd04599

>cd04599 CBS_pair_GGDEF_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the GGDEF (DiGuanylate-Cyclase (DGC)) domain. The GGDEF domain has been suggested to be homologous to the adenylyl cyclase catalytic domain and is thought to be involved in regulating cell surface adhesiveness in bacteria. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=98.34  E-value=1.6e-06  Score=67.84  Aligned_cols=53  Identities=28%  Similarity=0.439  Sum_probs=48.5

Q ss_pred             HHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHH
Q ss_conf             33332104754305510023888898741046620000004323232412340356
Q gi|255764505|r  219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR  274 (341)
Q Consensus       219 ~V~DiM~~~~~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR  274 (341)
T Consensus        52 ~v~~iMt~--~~itv~~~~~l~~a~~~M~~~~i~~lpVvd-~g~lvGiiT~~Divr  104 (105)
T cd04599          52 LVADAMTR--EVVTISPEASLLEAKRLMEEKKIERLPVLR-ERKLVGIITKGTIAL  104 (105)
T ss_pred             CHHHHCCC--CCEEECCCCCHHHHHHHHHHCCCCEEEEEE-CCEEEEEEECHHHCC
T ss_conf             96885027--989997949199999977985997999998-999999999458615