HHsearch alignment for GI: 255764505 and conserved domain: cd04603
>cd04603 CBS_pair_KefB_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the KefB (Kef-type K+ transport systems) domain which is involved in inorganic ion transport and metabolism. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=99.72 E-value=2.8e-17 Score=146.12 Aligned_cols=107 Identities=32% Similarity=0.410 Sum_probs=102.8
Q ss_pred EEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHHCCCCCCCHHHHCCCCCEEECCCCCHHHHHHHHHH
Q ss_conf 55100238888987410466200000043232324123403567617823370988348897897799878999999996
Q gi|255764505|r 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311 (341)
Q Consensus 232 ~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR~l~~~~~~~~v~~iMt~~p~~I~~d~~i~eAl~lM~~ 311 (341)
T Consensus 5 tv~~~~~L~~a~~~~~e~~~~~i~VVD~~~k~vG~it~~Dll~~~~~~~~~~~V~d~m~~~v~~i~~~~~v~dalr~~~~ 84 (111)
T cd04603 5 SVNCENPLREAIKMINELGARAVVVVDEENKVLGQVTLSDLLEIGPNDYETLKVCEVYIVPVPIVYCDSKVTDLLRIFRE 84 (111)
T ss_pred EECCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHCHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 86599959999999987699768998899968899889998643844553243877515677463899768999999874
Q ss_pred CCCCEEEEEECCCEEEEEEEHHHHHHC
Q ss_conf 799589998069848999858889743
Q gi|255764505|r 312 HNISVLMVVDDCQKAIGIVHFLDLLRF 338 (341)
Q Consensus 312 ~kI~~LpVVD~~~~lvGiIt~~DLlka 338 (341)
T Consensus 85 ~~~~~l~VVD~~grlvGiI~~rdlLr~ 111 (111)
T cd04603 85 TEPPVVAVVDKEGKLVGTIYERELLRF 111 (111)
T ss_pred CCCCEEEEECCCCCEEEEEEHHHHHCC
T ss_conf 499889999389979999962551239