HHsearch alignment for GI: 255764505 and conserved domain: cd04605
>cd04605 CBS_pair_MET2_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the MET2 domain. Met2 is a key enzyme in the biosynthesis of methionine. It encodes a homoserine transacetylase involved in converting homoserine to O-acetyl homoserine. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=99.80 E-value=2e-19 Score=161.81 Aligned_cols=108 Identities=31% Similarity=0.454 Sum_probs=101.4
Q ss_pred CCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHHCCCCCCCHHHHCCCCCEEECCCCCHHHHHH
Q ss_conf 54305510023888898741046620000004323232412340356761782337098834889789779987899999
Q gi|255764505|r 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307 (341)
Q Consensus 228 ~~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR~l~~~~~~~~v~~iMt~~p~~I~~d~~i~eAl~ 307 (341)
T Consensus 2 r~vvtv~~~~tv~~a~~~m~~~~~~~lpVvd~~~~~vGiit~~Di~~~~~~~--~~~v~~im~~~~~~~~~~~~~~~a~~ 79 (110)
T cd04605 2 RPVVTISEDASIKEAAKLMIEENINHLPVVDEDGRLVGIVTSWDISKAVARD--KKSVEDIMTRNVITATPDEPIDVAAR 79 (110)
T ss_pred CCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEECHHHHHHHHCC--CCCHHHCEEECHHHHHHHHHHHHHHH
T ss_conf 8998989939999999999972998899997999199999622788898707--97633604300120146558999999
Q ss_pred HHHHCCCCEEEEEECCCEEEEEEEHHHHHH
Q ss_conf 999679958999806984899985888974
Q gi|255764505|r 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337 (341)
Q Consensus 308 lM~~~kI~~LpVVD~~~~lvGiIt~~DLlk 337 (341)
T Consensus 80 ~m~~~~i~~lPVvD~~~~lvGiiT~~Di~k 109 (110)
T cd04605 80 KMERHNISALPVVDAENRVIGIITSEDISK 109 (110)
T ss_pred HHHHCCCEEEEEECCCCEEEEEEEHHHHCC
T ss_conf 999839619999918998999999377211