HHsearch alignment for GI: 255764505 and conserved domain: cd04609
>cd04609 CBS_pair_PALP_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the pyridoxal-phosphate (PALP) dependent enzyme domain upstream. The vitamin B6 complex comprises pyridoxine, pyridoxal, and pyridoxamine, as well as the 5'-phosphate esters of pyridoxal (PALP) and pyridoxamine, the last two being the biologically active coenzyme derivatives. The members of the PALP family are principally involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and other amine-containing compounds. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a pote
Probab=98.29 E-value=2.8e-06 Score=66.09 Aligned_cols=54 Identities=31% Similarity=0.536 Sum_probs=45.9
Q ss_pred HHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHH
Q ss_conf 3333321047543055100238888987410466200000043232324123403567
Q gi|255764505|r 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275 (341)
Q Consensus 218 l~V~DiM~~~~~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR~ 275 (341)
T Consensus 57 ~~v~~iM~~--~~~~v~~~~~l~~~~~~~~~~~~--~~vV~~~g~lvGIvT~~Dil~~ 110 (110)
T cd04609 57 LPVREVMGE--PLPTVDPDAPIEELSELLDRGNV--AVVVDEGGKFVGIITRADLLKY 110 (110)
T ss_pred CEEEEEEEC--CCEEECCCCCHHHHHHHHHHCCC--CEEEECCCEEEEEEEHHHHHCC
T ss_conf 769845675--94597898949999998876798--2499619999999983685294