HHsearch alignment for GI: 255764505 and conserved domain: cd04620
>cd04620 CBS_pair_7 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic genera
Probab=98.42 E-value=9e-07 Score=69.64 Aligned_cols=55 Identities=16% Similarity=0.335 Sum_probs=48.8
Q ss_pred HHHHHHHCCCCCCEEEEEHHH--HHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHH
Q ss_conf 333332104754305510023--888898741046620000004323232412340356
Q gi|255764505|r 218 VCASDVMHSGDSIPLVKIGCP--LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274 (341)
Q Consensus 218 l~V~DiM~~~~~ip~V~~~~s--i~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR 274 (341)
T Consensus 58 ~~v~~vMt~--~~itv~~~~~~~i~~a~~~M~~~~i~~lpVvd~~g~lvGiit~~Dilk 114 (115)
T cd04620 58 LPIGEVMTQ--PVVTLQESEIQDIFTALSLFRQHQIRHLPVLDDQGQLIGLVTAESIRQ 114 (115)
T ss_pred CCHHHHCCC--CCEEECCCCCCCHHHHHHHHHHCCEEEEEEECCCCEEEEEEEHHHCCC
T ss_conf 898896368--967983899726999999987559528999957997999999256232