HHsearch alignment for GI: 255764505 and conserved domain: cd04622

>cd04622 CBS_pair_9 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic genera
Probab=99.83  E-value=7.7e-20  Score=164.77  Aligned_cols=109  Identities=31%  Similarity=0.465  Sum_probs=100.7

Q ss_pred             CCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCH-HHHHHCC--CCCCCHHHHCCCCCEEECCCCCHHHH
Q ss_conf             43055100238888987410466200000043232324123403-5676178--23370988348897897799878999
Q gi|255764505|r  229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVA  305 (341)
Q Consensus       229 ~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDl-rR~l~~~--~~~~~v~~iMt~~p~~I~~d~~i~eA  305 (341)
T Consensus         2 ~~vti~~~~tl~~a~~~m~~~~~~~v~V~d-~~~~vGiiT~~Di~~~~~~~~~~~~~~~v~~iM~~~~i~v~~~~~l~~a   80 (113)
T cd04622           2 DVVTVSPDDTIREAARLMREHDVGALPVCE-NDRLVGIVTDRDIVVRAVAEGRDPDTTTVGDVMTRGVVTVTEDDDVDEA   80 (113)
T ss_pred             CCEEECCCCCHHHHHHHHHHCCCCEEEEEE-CCEEEEEEECHHHHHHHHHCCCCHHHCCHHHHHCCCCEEEECCCCHHHH
T ss_conf             977968939899999999972998899998-9999999963278899997399820077678641576799889987999


Q ss_pred             HHHHHHCCCCEEEEEECCCEEEEEEEHHHHHHC
Q ss_conf             999996799589998069848999858889743
Q gi|255764505|r  306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF  338 (341)
Q Consensus       306 l~lM~~~kI~~LpVVD~~~~lvGiIt~~DLlka  338 (341)
T Consensus        81 ~~~m~~~~i~~lpVvd~~~~~vGiIt~~Dilra  113 (113)
T cd04622          81 ARLMREHQVRRLPVVDDDGRLVGIVSLGDLARA  113 (113)
T ss_pred             HHHHHHCCCCEEEEEECCCEEEEEEEHHHHHCC
T ss_conf             999985796589999089989999997995477