HHsearch alignment for GI: 255764505 and conserved domain: cd04626
>cd04626 CBS_pair_13 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.86 E-value=6.4e-21 Score=172.64 Aligned_cols=109 Identities=25% Similarity=0.333 Sum_probs=101.9
Q ss_pred CCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHHC-CCCCCCHHHHCCCCCEEECCCCCHHHHHH
Q ss_conf 43055100238888987410466200000043232324123403567617-82337098834889789779987899999
Q gi|255764505|r 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307 (341)
Q Consensus 229 ~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR~l~~-~~~~~~v~~iMt~~p~~I~~d~~i~eAl~ 307 (341)
T Consensus 2 dv~tv~~~~tl~eA~~~m~~~~~~~~~Vvd~~~~l~GIiT~~Di~~~~~~~~~~~~~V~~iMt~~~itv~~~~~~~~a~~ 81 (111)
T cd04626 2 DFPTIDEDASIREALHEMLKYNTNEIIVKDNEEKLKGVVTFTDILDLDLFESFLEKKVFNIVSQDVFYVNEEDTIDEALD 81 (111)
T ss_pred CCEEECCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEEEHHHHHHHHHCCCCCCCCHHHHCCCCCEEECCCCCHHHHHH
T ss_conf 97399962939999999998499889999699979999994999999852687788889960699879999793999999
Q ss_pred HHHHCCCCEEEEEECCCEEEEEEEHHHHHHC
Q ss_conf 9996799589998069848999858889743
Q gi|255764505|r 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338 (341)
Q Consensus 308 lM~~~kI~~LpVVD~~~~lvGiIt~~DLlka 338 (341)
T Consensus 82 ~M~~~~i~~LPVvd~-~klvGiit~~Dil~k 111 (111)
T cd04626 82 IMREKQIGRLPVVDD-NKLIGVVRTKDILDK 111 (111)
T ss_pred HHHHHCCCEEEEEEC-CEEEEEEEHHHHCCC
T ss_conf 999809988999999-999999996981488