HHsearch alignment for GI: 255764505 and conserved domain: cd04626
>cd04626 CBS_pair_13 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=98.25 E-value=3.8e-06 Score=65.12 Aligned_cols=53 Identities=26% Similarity=0.432 Sum_probs=48.4
Q ss_pred HHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHH
Q ss_conf 33333210475430551002388889874104662000000432323241234035
Q gi|255764505|r 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273 (341)
Q Consensus 218 l~V~DiM~~~~~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlr 273 (341)
T Consensus 57 ~~V~~iMt~--~~itv~~~~~~~~a~~~M~~~~i~~LPVvd~-~klvGiit~~Dil 109 (111)
T cd04626 57 KKVFNIVSQ--DVFYVNEEDTIDEALDIMREKQIGRLPVVDD-NKLIGVVRTKDIL 109 (111)
T ss_pred CCHHHHCCC--CCEEECCCCCHHHHHHHHHHHCCCEEEEEEC-CEEEEEEEHHHHC
T ss_conf 888996069--9879999793999999999809988999999-9999999969814