HHsearch alignment for GI: 255764505 and conserved domain: cd04632

>cd04632 CBS_pair_19 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.83  E-value=9.5e-20  Score=164.10  Aligned_cols=111  Identities=29%  Similarity=0.354  Sum_probs=101.1

Q ss_pred             CCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHHCC---------------CCCCCHHHHCCCC
Q ss_conf             5430551002388889874104662000000432323241234035676178---------------2337098834889
Q gi|255764505|r  228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---------------LNTLSVEDVMIKN  292 (341)
Q Consensus       228 ~~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR~l~~~---------------~~~~~v~~iMt~~  292 (341)
T Consensus         1 kdvvTv~~~~~l~~a~~lm~~~~i~~lPVvd~~g~lvGiiT~~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~iM~~~   80 (128)
T cd04632           1 EDVITVREDDSVGKAINVLREHGISRLPVVDDNGKLTGIVTRHDIVDFVVRDRDKARTGDRSGEKERMLDLPVYDAMSSP   80 (128)
T ss_pred             CCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHCCCHHCCHHHHCCHHHHHHCCCHHHHCCCC
T ss_conf             99869899592999999999839977999968997899998899999885321010112210012234067999966799


Q ss_pred             CEEECCCCCHHHHHHHHHHCCCCEEEEE--ECCCEEEEEEEHHHHHHC
Q ss_conf             7897799878999999996799589998--069848999858889743
Q gi|255764505|r  293 PKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLLRF  338 (341)
Q Consensus       293 p~~I~~d~~i~eAl~lM~~~kI~~LpVV--D~~~~lvGiIt~~DLlka  338 (341)
T Consensus        81 vitv~~~~~i~~a~~~M~~~~i~~lpVv~~dd~~~lvGIiT~~DilrA  128 (128)
T cd04632          81 VITASPNDSVRDAVDRMLENDDSSVVVVTPDDDTKVVGILTKKDVLRA  128 (128)
T ss_pred             CEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEHHHHHCC
T ss_conf             879999293999999999779978966847899989999996996469