HHsearch alignment for GI: 255764505 and conserved domain: cd04632
>cd04632 CBS_pair_19 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=98.60 E-value=1.6e-07 Score=75.14 Aligned_cols=61 Identities=26% Similarity=0.350 Sum_probs=53.9
Q ss_pred HHHHH-HHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEC--CCCCEEEEEEECCCHHHH
Q ss_conf 11124-3333321047543055100238888987410466200000--043232324123403567
Q gi|255764505|r 213 LGTLF-VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDIFRN 275 (341)
Q Consensus 213 lg~~L-l~V~DiM~~~~~ip~V~~~~si~eal~~m~~~~~g~v~Vv--d~~~~liGIITdgDlrR~ 275 (341)
T Consensus 65 ~~~~~~~~V~~iM~~--~vitv~~~~~i~~a~~~M~~~~i~~lpVv~~dd~~~lvGIiT~~DilrA 128 (128)
T cd04632 65 KERMLDLPVYDAMSS--PVITASPNDSVRDAVDRMLENDDSSVVVVTPDDDTKVVGILTKKDVLRA 128 (128)
T ss_pred HHHHHCCCHHHHCCC--CCEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEHHHHHCC
T ss_conf 223406799996679--9879999293999999999779978966847899989999996996469