HHsearch alignment for GI: 255764505 and conserved domain: cd04637

>cd04637 CBS_pair_24 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.81  E-value=3.8e-19  Score=159.73  Aligned_cols=109  Identities=27%  Similarity=0.440  Sum_probs=99.6

Q ss_pred             CCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHHCC------------CCCCCHHHHCCCCCEEE
Q ss_conf             430551002388889874104662000000432323241234035676178------------23370988348897897
Q gi|255764505|r  229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------LNTLSVEDVMIKNPKVI  296 (341)
Q Consensus       229 ~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR~l~~~------------~~~~~v~~iMt~~p~~I  296 (341)
T Consensus         2 ~viTv~p~~tl~~a~~~m~~~~i~~lpVvd-~~~lvGivT~~Di~~~~~~~~~~~~~~~~~~~~~~~~v~~iM~~~~itv   80 (122)
T cd04637           2 RVVTVEMDDRLEEVREIFEKHKFHHLLVVE-DNELVGVISDRDYLKAISPFLGTAGETEKDLATLNRRAHQIMTRDPITV   80 (122)
T ss_pred             CCEEECCCCCHHHHHHHHHHCCCCEEEEEE-CCEEEEEEEHHHHHHHHHHCCCCCHHHHCCCHHHCCCHHHHCCCCCEEE
T ss_conf             749988969699999999874998899998-9999999888999987500245310221121230689999463898399


Q ss_pred             CCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHHHHC
Q ss_conf             799878999999996799589998069848999858889743
Q gi|255764505|r  297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF  338 (341)
Q Consensus       297 ~~d~~i~eAl~lM~~~kI~~LpVVD~~~~lvGiIt~~DLlka  338 (341)
T Consensus        81 ~~~~~l~~a~~~m~~~~i~~lPVvd~~~~lvGiIT~~Diik~  122 (122)
T cd04637          81 SPDTPVDEASKLLLENSISCLPVVDENGQLIGIITWKDLLKY  122 (122)
T ss_pred             CCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEEEHHHHHCC
T ss_conf             999849999999997493089999689989999996883275